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1. (Article ID: 1526)
Katzenellenbogen E, Kocharova NA, Zatonsky GV, Shashkov AS, Knirel YA, Gamian A, Bogulska M
Structure of the O-polysaccharide of Hafnia alvei strain PCM 1189 that has hexa- to octa-saccharide repeating units owing to incomplete glucosylation
Carbohydrate Research 340(2) (2005)
263-270
The O-polysaccharide of Hafnia alvei PCM 1189 consists of D-glucose, D-galactose, D-GalNAc and D-GlcA and lacks the strict regularity. The intact and carboxyl-reduced polysaccharides as well as oligosaccharides obtained by partial acid hydrolysis were studied by chemical and enzymatic analyses, methylation and NMR spectroscopy. The following structure was established for the O-polysaccharide, which is built up of branched hexa- to octasaccharide repeating units differing in the number of lateral glucose residues: [structure: see text] where the glucose residues shown in italics are nonstoichiometric substituents. The repeating units include also a minor O-acetyl group, whose position was not determined.
Lipopolysaccharide, O-antigen, Hafnia alvei, enterobacteria, bacterial polysaccharide structure
NCBI PubMed ID: 15639246Journal NLM ID: 0043535Publisher: Elsevier
Institutions: N.D. Zelinsky Institute of Organic Chemistry, Russian Academy of Sciences, Moscow, Russia, Immunochemistry Department, L. Hirszfeld Institute of Immunology and Experimental Therapy, Polish Academy of Sciences, Wroclaw, Poland
Methods: methylation, NMR, sugar analysis, enzymatic analysis
The publication contains the following compound(s):
- Compound ID: 4127
|
66%a-D-Glcp-(1-2)-a-D-Glcp-(1-6)-+
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83%a-D-Glcp-(1-4)-+ |
| |
-6)-a-D-Glcp-(1-4)-b-D-GlcpA-(1-4)-b-D-GalpNAc-(1-3)-a-D-Galp-(1-3)-b-D-GalpNAc-(1- |
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Structure type: polymer chemical repeating unit
Compound class: O-polysaccharide
Reference(s) to other database(s): GTC:G13056YR, GlycomeDB:
37775
- Compound ID: 4128
|
a-D-Glcp-(1-2)-a-D-Glcp-(1-6)-+
|
a-D-Glcp-(1-4)-a-D-Glcp-(1-4)-b-D-GlcpA-(1-4)-b-D-GalpNAc-(1-3)-a-D-Galp-(1-3)-D-GalNAc |
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Structure type: oligomer
Reference(s) to other database(s): GTC:G52602RI, GlycomeDB:
27698
- Compound ID: 4129
|
a-D-Glcp-(1-6)-+
|
a-D-Glcp-(1-4)-a-D-Glcp-(1-4)-b-D-GlcpA-(1-4)-b-D-GalpNAc-(1-3)-a-D-Galp-(1-3)-D-GalNAc |
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Structure type: oligomer
Reference(s) to other database(s): GTC:G04298YB, GlycomeDB:
27699
- Compound ID: 4130
|
a-D-Glcp-(1-2)-a-D-Glcp-(1-6)-+
|
a-D-Glcp-(1-4)-b-D-GlcpA-(1-4)-b-D-GalpNAc-(1-3)-a-D-Galp-(1-3)-D-GalNAc |
Show graphically |
Structure type: oligomer
Reference(s) to other database(s): GTC:G17362XD, GlycomeDB:
27700
- Compound ID: 4131
|
a-D-Glcp-(1-6)-+
|
a-D-Glcp-(1-4)-b-D-GlcpA-(1-4)-b-D-GalpNAc-(1-3)-a-D-Galp-(1-3)-D-GalNAc |
Show graphically |
Structure type: oligomer
Reference(s) to other database(s): GTC:G63648LS, GlycomeDB:
27701
- Compound ID: 4132
|
a-D-Glcp-(1-2)-a-D-Glcp-(1-6)-+
|
a-D-Glcp-(1-4)-b-D-Glcp-(1-4)-b-D-GlcpA-(1-4)-D-GalpNAc |
Show graphically |
Structure type: oligomer
Reference(s) to other database(s): GTC:G97991OT, GlycomeDB:
27702
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