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1.
(
Organism ID:
1715)
Escherichia
coli
O113
(
NCBI TaxID 1162729
,
species name lookup
)
Taxonomic group:
bacteria
Phylum:
Proteobacteria
The following compound(s) are assigned to this organism:
Compound ID:
3017
b-D-Galp-(1-3)-+ | -4)-a-D-GalpNAc-(1-4)-a-D-GalpA-(1-3)-a-D-Galp-(1-3)-b-D-GlcpNAc-(1-
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Structure type:
suggested polymer biological repeating unit
Compound class:
O-polysaccharide, O-antigen
Reference(s) to other database(s):
GTC:G95309PZ, GlycomeDB:
33574
Carbohydrate Research
1995, "The structure of the O-specific polysaccharide from Escherichia coli O113 lipopolysaccharide"
CSDB ID 4017
(all data & tools)
Infection and Immunity
1999, "Molecular characterization of the locus encoding biosynthesis of the lipopolysaccharide O antigen of Escherichia coli serotype O113"
CSDB ID 4023
(all data & tools)
FEMS Microbiology Reviews
2006, "The structures of Escherichia coli O-polysaccharide antigens"
CSDB ID 20673
(all data & tools)
Journal of Molecular Recognition
2009, "Atomic force microscopy study of the role of LPS O-antigen on adhesion of E. coli"
CSDB ID 24241
(all data & tools)
Glycoconjugate Journal
2012, "Convergent synthesis of the pentasaccharide repeating unit of the O-antigenic polysaccharide of enterohaemorrhagic Escherichia coli O113"
CSDB ID 27302
(all data & tools)
FEMS Microbiology Reviews
2020, "Structure and genetics of Escherichia coli O antigens"
CSDB ID 1853
(all data & tools)
Compound ID:
6686
3HOMyr-(1-2)-+ | P-4)-+ | | | Myr-(1-3)-3HOMyr-(1-3)-+ | | | | | Lau-(1-3)-3HOMyr-(1-2)-b-D-GlcpN-(1-6)-a-D-GlcpN-(1-P | | Subst-(2-6)-+ 3HOMyr-(1-3)-+ Subst = O-antigen + outer core + inner core
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Structure type:
oligomer
Compound class:
LOS, lipid A
Journal of Biological Chemistry
1994, "Heparin, sulfated heparinoids, and lipoteichoic acids bind to the 70-kDa peptidoglycan/lipopolysaccharide receptor protein on lymphocytes"
CSDB ID 136956
(all data & tools)
Compound ID:
10791
b-D-Galp-(1-3)-a-D-GalpNAc-(1-4)-a-D-GalpA-(1-3)-a-D-Galp-(1-3)-b-D-GlcpNAc-(1--/p-methoxyphenyl/
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Structure type:
oligomer
Aglycon:
p-methoxyphenyl
Trivial name:
repeating unit
Compound class:
O-polysaccharide, O-antigen
Reference(s) to other database(s):
GTC:G39690XV
Glycoconjugate Journal
2012, "Convergent synthesis of the pentasaccharide repeating unit of the O-antigenic polysaccharide of enterohaemorrhagic Escherichia coli O113"
CSDB ID 28615
(all data & tools)
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