Taxonomic group: bacteria / Proteobacteria
(Phylum: Proteobacteria)
Associated disease: infection due to Salmonella enterica [ICD11:
XN5VC 
]
The structure was elucidated in this paperNCBI PubMed ID: 12537693Publication DOI: 10.1179/096805102125000678Journal NLM ID: 9433350Publisher: Maney Publishing
Correspondence: uzaehr

fz-borstel.de
Institutions: Research Center Borstel, Center of Medicine and Biosciences, Borstel, Germany
One major component of the Salmonella enterica sv. Minnesota Re deep rough mutant (strain R595) lipopolysaccharide is hepta-acyl lipid A (LAhepta). In a recent publication [Tanamoto K-l, Azurru S. Salmonella-type heptaacylated lipid A is inactive and acts as an antagonist of lipopolysaccharide action on human line cells. Journal of Immunology 2000; 164: 3149-3156] the corresponding synthetic hepta-acyl lipid A (compound 516) was reported to be agonistically inactive but to rather suppress pro-inflammatory activation by the endotoxic hexa-acyl lipid A (LAhexa, compound 506) and S-form LPS from Escherichia coli in the human macrophage-like cell lines THP-1 and U937. These results, however, were in contrast to previous findings with human mononuclear cells (hMNC) isolated from peripheral blood, in which compound 516 was found to be an agonist, expressing low, but significant, cytokine-inducing activity as compared to LAhexa. We have investigated the structure of natural LAhepta from the S. enterica sv. Minnesota Re deep rough mutant strain (R595) by TLC immunoblot, MALDI-TOF mass spectrometry and NMR spectroscopy. Using these techniques, the structural identity between Lahepta and the synthetic compound 516 was confirmed. In corroboration of previous findings with studies employing compound 516, purified LAhepta was found to induce the production of TNF-a, IL-1b and IL-6 in hMNC, thus displaying moderate agonistic activity. Furthermore, we showed that LAhepta agonistically activated nuclear translocation of NF-kB in THP-1 cells, thus clearly ruling out the possibility that LAhepta is an antagonist and that its biological activity is influenced by the type of human myeloid cells used for testing endotoxicity (hMNC versus THP-1 cells).
Lipopolysaccharide, LPS, structure, strain, lipid A, Salmonella enterica, Re
Structure type: oligomer
Location inside paper: p.354, fig.10
Compound class: lipid A
Contained glycoepitopes: IEDB_135394,IEDB_137340,IEDB_141181,IEDB_141807,IEDB_151531,IEDB_176772,IEDB_534864
Methods: 13C NMR, 1H NMR, NMR-2D, 31P NMR, MALDI-TOF MS, TLC immunoblot
Biological activity: Cytokine induction in hMNC, activation of NF-kB in THP-1 cells
Comments, role: S. enterica sv. Minnesota Re mutant strain R595
NCBI Taxonomy refs (TaxIDs): 70803
Show glycosyltransferases
NMR conditions: in vol 20%CD3OD / vol 30%CDCl3 at 285 K
[as TSV]
13C NMR data:
Linkage Residue C1 C2 C3 C4 C5 C6
0,2,3 lXPam
0,2 lR3HOMyr
0,3 lR3HOMyr
0,6,2,3 lXLau
0,6,2 lR3HOMyr
0,6,3,3 lXMyr
0,6,3 lR3HOMyr
0,6,4 P
0,6 bDGlcpN 102.9 55.1 74.4 72.5 76.2 61.2
0 aDGlcpN 95.2 52.8 74.6 69.4 73.5 69.7
P
1H NMR data:
Linkage Residue H1 H2 H3 H4 H5 H6
0,2,3 lXPam
0,2 lR3HOMyr
0,3 lR3HOMyr
0,6,2,3 lXLau
0,6,2 lR3HOMyr
0,6,3,3 lXMyr
0,6,3 lR3HOMyr
0,6,4 P
0,6 bDGlcpN 4.51 3.78 5.06 4.16 3.34 3.82
0 aDGlcpN 5.34 4.06 5.09 3.40 4.01 3.74-3.95
P
1H/13C HSQC data:
Linkage Residue C1/H1 C2/H2 C3/H3 C4/H4 C5/H5 C6/H6
0,2,3 lXPam
0,2 lR3HOMyr
0,3 lR3HOMyr
0,6,2,3 lXLau
0,6,2 lR3HOMyr
0,6,3,3 lXMyr
0,6,3 lR3HOMyr
0,6,4 P
0,6 bDGlcpN 102.9/4.51 55.1/3.78 74.4/5.06 72.5/4.16 76.2/3.34 61.2/3.82
0 aDGlcpN 95.2/5.34 52.8/4.06 74.6/5.09 69.4/3.40 73.5/4.01 69.7/3.74-3.95
P
1H NMR data:
Linkage | Residue | H1 | H2 | H3 | H4 | H5 | H6 |
0,2,3 | lXPam | |
0,2 | lR3HOMyr | |
0,3 | lR3HOMyr | |
0,6,2,3 | lXLau | |
0,6,2 | lR3HOMyr | |
0,6,3,3 | lXMyr | |
0,6,3 | lR3HOMyr | |
0,6,4 | P | |
0,6 | bDGlcpN | 4.51 | 3.78 | 5.06 | 4.16 | 3.34 | 3.82 |
0 | aDGlcpN | 5.34 | 4.06 | 5.09 | 3.40 | 4.01 | 3.74 3.95 |
| P | |
|
13C NMR data:
Linkage | Residue | C1 | C2 | C3 | C4 | C5 | C6 |
0,2,3 | lXPam | |
0,2 | lR3HOMyr | |
0,3 | lR3HOMyr | |
0,6,2,3 | lXLau | |
0,6,2 | lR3HOMyr | |
0,6,3,3 | lXMyr | |
0,6,3 | lR3HOMyr | |
0,6,4 | P | |
0,6 | bDGlcpN | 102.9 | 55.1 | 74.4 | 72.5 | 76.2 | 61.2 |
0 | aDGlcpN | 95.2 | 52.8 | 74.6 | 69.4 | 73.5 | 69.7 |
| P | |
|
There is only one chemically distinct structure: