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1.
(
Organism ID:
2516)
Escherichia
coli
O86:B7
(
Ancestor NCBI TaxID 2162909
,
species name lookup
)
Taxonomic group:
bacteria
Phylum:
Proteobacteria
The following compound(s) are assigned to this organism:
Compound ID:
4316
a-L-Fucp-(1-2)-+ | -2)-a-D-Galp-(1-3)-b-D-Galp-(1-3)-a-D-GalpNAc-(1-3)-a-D-GalpNAc-(1-
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Structure type:
suggested polymer biological repeating unit
Compound class:
O-polysaccharide, O-antigen
Reference(s) to other database(s):
GTC:G64231CD, GlycomeDB:
27794
Applied and Environmental Microbiology
2005, "Molecular Analysis of the O-Antigen Gene Cluster of Escherichia coli O86:B7 and Characterization of the Chain Length Determinant Gene (wzz)"
CSDB ID 10715
(all data & tools)
Biochemical and Biophysical Research Communications
2007, "Three UDP-hexose 4-epimerases with overlapping substrate specificity coexist in E. coli O86:B7"
CSDB ID 21563
(all data & tools)
Biochemistry
2008, "Identification of a New α1,2-Fucosyltransferase Involved in O-Antigen Biosynthesis of Escherichia coli O86:B7 and Formation of H-Type 3 Blood Group Antigen"
CSDB ID 22686
(all data & tools)
Molecular Immunology
2020, "Specificity of human natural antibodies referred to as anti-Tn"
CSDB ID 3832
(all data & tools)
Glycoconjugate Journal
2021, "Synthesis of bodipy-labeled bacterial polysaccharides and their interaction with human dendritic cells"
CSDB ID 10934
(all data & tools)
Compound ID:
7893
b-L-Fucp-(1---P---P---5)-G
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Structure type:
monomer
Trivial name:
GDP-β-L-fucopyranose, GDP-β-L-fucose, GDP-L-fucose
Compound class:
nucleoside diphosphate sugar
Biochemistry
2008, "Identification of a New α1,2-Fucosyltransferase Involved in O-Antigen Biosynthesis of Escherichia coli O86:B7 and Formation of H-Type 3 Blood Group Antigen"
CSDB ID 23041
(all data & tools)
Compound ID:
7894
a-L-Fucp-(1-2)-b-D-Galp-(1-3)-a-D-GlcpNAc-(1-1)-Me
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Structure type:
oligomer
Trivial name:
fucosylated trisaccharide
Reference(s) to other database(s):
GlycomeDB:
443
Biochemistry
2008, "Identification of a New α1,2-Fucosyltransferase Involved in O-Antigen Biosynthesis of Escherichia coli O86:B7 and Formation of H-Type 3 Blood Group Antigen"
CSDB ID 23042
(all data & tools)
Compound ID:
11802
a-L-Fucp-(1-2)-+ | -2)-a-D-Galp-(1-3)-b-D-Galp-(1-3)-a-D-GalpNAc-(1-
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Structure type:
fragment of a bigger structure
Trivial name:
microbial carbohydrate determinants
Compound class:
O-polysaccharide, O-antigen
Reference(s) to other database(s):
GTC:G72643BS
Nature Chemical Biology
2014, "Microbial glycan microarrays define key features of host-microbial interactions"
CSDB ID 30476
(all data & tools)
Compound ID:
14502
a-L-Fucp-(1-2)-+ | -2)-a-D-Galp-(1-3)-b-D-Galp-(1-3)-a-D-GalpNAc-(1-3)-a-D-GalpNAc-(1-
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Structure type:
suggested polymer biological repeating unit
Aglycon:
core-lipid A
Trivial name:
O-unit
Compound class:
O-polysaccharide, LPS
Reference(s) to other database(s):
GTC:G64231CD
Molecular Immunology
2020, "Specificity of human natural antibodies referred to as anti-Tn"
CSDB ID 3637
(all data & tools)
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2516
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