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1. (Article ID: 3342)
Silipo A, Molinaro A, Ierano T, De Soyza A, Sturiale L, Garozzo D, Aldridge C, Corris PA, Khan CM, Lanzetta R, Parrilli M
The Complete Structure and Pro-inflammatory Activity of the Lipooligosaccharide of the Highly Epidemic and Virulent Gram-Negative Bacterium Burkholderia cenocepacia ET-12 (Strain J2315)
Chemistry: a European Journal 13(12) (2007)
3501-3511
Members of genus Burkholderia include opportunistic Gram-negative bacteria that are responsible for serious infections in immunocompromised and cystic fibrosis (CF) patients. The Burkholderia cepacia complex is a group of microorganisms composed of at least nine closely related genomovars. Among these, B. cenocepacia is widely recognized to cause epidemics associated with excessive mortality. Species that belong to this strain are problematic CF pathogens because of their high resistance to antibiotics, which makes respiratory infections difficult to treat and impossible to eradicate. Infection by these bacteria is associated with higher mortality in CF and poor outcomes following lung transplantation. One virulence factor contributing to this is the pro-inflammatory lipopolysaccharide (LPS) molecules. Thus, the knowledge of the lipopolysaccharide structure is an essential prerequisite to the understanding of the molecular mechanisms involved in the inflammatory process. Such data are instrumental in aiding the design of antimicrobial compounds and for developing therapeutic strategies against the inflammatory cascade. In particular, defining the structure of the LPS from B. cenocepacia ET-12 clone LMG 16656 (also known as J2315) is extremely important given the recent completion of the sequencing project at the Sanger Centre using this specific strain. In this paper we address this issue by defining the pro-inflammatory activity of the pure lipopolysaccharide, and by describing its full primary structure. The activity of the lipopolysaccharide was tested as a stimulant in human myelomonocytic U937 cells. The structural analysis was carried out by compositional analysis, mass spectrometry and 2D NMR spectroscopy on the intact lipooligosacchride (LOS) and its fragments, which were obtained by selective chemical degradations
lipopolysaccharides, NMR spectroscopy, mass spectrometry, cystic fibrosis, Burkholderia cenocepacia ET-12
NCBI PubMed ID: 17219455Publication DOI: 10.1002/chem.200601406Journal NLM ID: 9513783Publisher: Weinheim: VCH Verlagsgesellschaft/Verlag I
Correspondence: molinaro

unina.it
Institutions: Dipartimento di Chimica Organica e Biochimica, Universita di Napoli, Complesso Universitario Monte Sant'angelo, Via Cintia 4, 80126 Napoli, Italy, Fax: (+39) 081-674-393
Methods: 13C NMR, 1H NMR, methylation, NMR-2D, GC-MS, chemical analysis, MALDI-MS, composition analysis, NMR-1D
The publication contains the following compound(s):
- Compound ID: 7378
|
L-gro-a-D-manHepp-(1-7)-L-gro-a-D-manHepp-(1-7)-+
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a-D-Glcp-(1-6)-+ | b-D-Glcp-(1-4)-+ a-Kop-(2-4)-+
| | | |
a-L-Rhap-(1-3)-?%b-D-QuipNAc-(1-7)-L-gro-a-D-manHepp-(1-2)-a-D-Galp-(1-3)-L-gro-a-D-manHepp-(1-3)-L-gro-a-D-manHepp-(1-5)-a-Kdop-(2--/lipd A/ |
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Structure type: oligomer
Aglycon: lipd A
Compound class: core oligosaccharide
Reference(s) to other database(s): GTC:G27007XR, GlycomeDB:
34658
- Compound ID: 7379
|
R-3HOMyr-(1-3)-+
|
?%b-L-Arap4N-(1--P--1)--+ |
| |
?%P-4)-+ | |
| | |
Myr-(1-3)-R-3HOPam-(1-2)-+ | | |
| | | |
?%b-L-Arap4N-(1-8)-a-Kop-(2-4)-+ | | | |
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?%L-gro-a-D-manHepp-(1-7)-+ | | | | |
| | | | | |
a-D-Glcp-(1-6)-+ | b-D-Glcp-(1-4)-+ | | | | |
| | | | | | | |
a-L-Rhap-(1-3)-b-D-QuipNAc-(1-7)-L-gro-a-D-manHepp-(1-2)-a-D-Galp-(1-3)-L-gro-a-D-manHepp-(1-3)-L-gro-a-D-manHepp-(1-5)-a-Kdop-(2-6)-b-D-GlcpN-(1-6)-a-D-GlcpN
| |
?%R-3HOMyr-(1-3)-+ |
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R-3HOPam-(1-2)-+ |
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Structure type: oligomer
Compound class: LOS
Reference(s) to other database(s): GlycomeDB:
34713
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2. (Article ID: 3460)
De Soyza A, Silipo A, Lanzetta R, Govan JR, Molinaro A
Chemical and biological features of Burkholderia cepacia complex lipopolysaccharides
Innate Immunity 14(3) (2008)
127-144
The Burkholderia cepacia complex comprises 10 closely related Gram-negative organisms all of which appear capable of causing disease in humans. These organisms appear of particular relevance to patients with cystic fibrosis. Lipopolysaccharide (LPS) is an important virulence determinant in Gram-negative pathogens. In this review, we highlight important data within the field commenting on LPS/lipid A structure-to-function relationships and cytokine induction capacity of Burkholderia strains studied so far
Lipopolysaccharide, virulence, Pseudomonas aeruginosa, cystic fibrosis, Burkholderia cenocepacia
NCBI PubMed ID: 18562572Publication DOI: 10.1177/1753425908093984Journal NLM ID: 101469670Publisher: Sage Publications
Correspondence: anthony.de-soyza

ncl.ac.uk
Institutions: Transplantation and Immunobiology Group, Institute of Cellular Medicine, Newcastle University and The Freeman Hospital, Newcastle-upon-Tyne, UK
Methods: 13C NMR, 1H NMR, NMR-2D, MS, composition analysis, NMR-1D
The publication contains the following compound(s):
- Compound ID: 7757
|
?%b-L-Arap4N-(1-8)-a-Kop-(2-4)-+
|
a-L-Rhap-(1-2)-+ b-D-Glcp-(1-4)-+ |
| | |
L-gro-a-D-manHepp-(1-7)-L-gro-a-D-manHepp-(1-3)-L-gro-a-D-manHepp-(1-5)-a-Kdop-(2--/lipid A/ |
Show graphically |
Structure type: oligomer
Aglycon: lipid A
Compound class: core oligosaccharide
Reference(s) to other database(s): GTC:G41986CI
- Compound ID: 7760
|
?%b-L-Arap4N-(1-8)-a-Kop-(2-4)-+
|
?%L-gro-a-D-manHepp-(1-7)-+ |
| |
a-D-Glcp-(1-6)-+ | b-D-Glcp-(1-4)-+ |
| | | |
a-L-Rhap-(1-3)-?%b-D-QuipNAc-(1-7)-L-gro-a-D-manHepp-(1-2)-a-D-Galp-(1-3)-L-gro-a-D-manHepp-(1-3)-L-gro-a-D-manHepp-(1-5)-a-Kdop-(2--/lipid A/ |
Show graphically |
Structure type: oligomer
Aglycon: lipid A
Compound class: LPS
Reference(s) to other database(s): GTC:G90791YJ
- Compound ID: 7758
|
?%b-L-Arap4N-(1-8)-a-Kop-(2-4)-+
|
a-L-Rhap-(1-2)-+ b-D-Glcp-(1-4)-+ |
| | |
?%D-gro-a-D-manHepp-(1-7)-?%L-gro-a-D-manHepp-(1-3)-L-gro-a-D-manHepp-(1-7)-L-gro-a-D-manHepp-(1-3)-L-gro-a-D-manHepp-(1-5)-a-Kdop-(2--/lipid A/ |
Show graphically |
Structure type: oligomer
Aglycon: lipid A
Compound class: LPS
Reference(s) to other database(s): GTC:G04017UD
- Compound ID: 7759
|
?%b-L-Arap4N-(1-8)-a-Kop-(2-4)-+
|
L-gro-a-D-manHepp-(1-6)-b-D-Glcp-(1-4)-+ |
| |
b-D-QuipNAc-(1-3)-a-L-Rhap-(1-2)-+ | |
| | |
b-D-Glcp-(1-3)-a-D-GalpNAc-(1-3)-b-D-GalpNAc-(1-3)-a-L-Rhap-(1-3)-L-gro-a-D-manHepp-(1-3)-L-gro-a-D-manHepp-(1-5)-a-Kdop-(2--/lipid A/
|
L-gro-a-D-manHepp-(1-7)-+ |
Show graphically |
Structure type: oligomer
Aglycon: lipid A
Compound class: core oligosaccharide
Reference(s) to other database(s): GTC:G95215KN
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