CSDB: Search results

Found 1 organism. Displayed organism 1
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1. (Organism ID: 377)

Bordetella bronchiseptica

(NCBI TaxID 518, species name lookup)

Taxonomic group: bacteria
Phylum: Proteobacteria

The following compound(s) are assigned to this organism:

Compound ID: 563

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Compound ID: 564

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Compound ID: 565

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Compound ID: 566

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Compound ID: 581

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Structure type: homopolymer
Compound class: O-polysaccharide, O-antigen
Reference(s) to other database(s): GTC:G17747AL, GlycomeDB:26665

Biochemistry (Moscow) 1994, "The structure of lipopolysaccharides of gram-negative bacteria. III. The structure of O-antigens: A review"
CSDB ID 108417 (all data & tools)

Journal of Biological Chemistry 2006, "Complete structure of Bordetella bronchiseptica and Bordetella parapertussis lipopolysaccharides"
CSDB ID 20412 (all data & tools)
Compound ID: 7225

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Structure type: monomer
Aglycon: O-antigen
Trivial name: Non-reucing end of LPS
Reference(s) to other database(s): GlycomeDB:35074

Journal of Biological Chemistry 2006, "Complete structure of Bordetella bronchiseptica and Bordetella parapertussis lipopolysaccharides"
CSDB ID 20122 (all data & tools)
Compound ID: 7226

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Structure type: monomer
Aglycon: O-antigen
Trivial name: Non-reucing end of LPS

Journal of Biological Chemistry 2006, "Complete structure of Bordetella bronchiseptica and Bordetella parapertussis lipopolysaccharides"
CSDB ID 20410 (all data & tools)
Compound ID: 7227

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Structure type: fragment of a bigger structure
Trivial name: fragment of LPS
Reference(s) to other database(s): GTC:G85710KQ, GlycomeDB:27971

Journal of Biological Chemistry 2006, "Complete structure of Bordetella bronchiseptica and Bordetella parapertussis lipopolysaccharides"
CSDB ID 20411 (all data & tools)

Compound ID: 7228

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Compound ID: 7229

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Compound ID: 7230

a-D-GlcpN-(1-7)-+ | a-D-GlcpA-(1-2)-L-gro-a-D-manHepp-(1-3)-+ | | ?%P-4)-+ | | a-D-GalpNA-(1-6)-+ | | | L-gro-a-D-manHepp-(1-4)-+ | | | | | Subst-(?-4)-a-L-GalpNAc3NAcA6NH2-(1-4)-b-D-ManpNAc3NAcA6NH2-(1-4)-b-D-GlcpNAc3NAcA6NH2-(1-4)-a-D-GalpNAc-(1-4)-b-D-ManpNAc3NAcA-(1-3)-b-D-FucpNAc4N(%)Me-(1-6)-a-D-GlcpNAc-(1-4)-b-D-ManpNAc3NAcA-(1-3)-b-D-FucpNAc4N(%)Me-(1-6)-a-D-GlcpN-(1-4)-b-D-Glcp-(1-4)-L-gro-a-D-manHepp-(1-5)-Sug Subst = O-antigen; Sug = anhKdo

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Compound ID: 1030

-6)-b-D-GlcpNAc-(1- Show graphically

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Structure type: homopolymer
Trivial name: poly-β-1,6-GlcNAc (PGA), biofilm, poly-b-(1-6)-N-acetyl-D-glucosamine (PNAG), poly-β-N-acetyl-glucosamine (PNAG), PNAG, poly-N-acetylglucosamine, PNAG
Compound class: CPS, EPS, O-polysaccharide, glucan, polysaccharide
Reference(s) to other database(s): GTC:G36952FI, GlycomeDB:11210

Journal of Bacteriology 2007, "Role of a Putative Polysaccharide Locus in Bordetella Biofilm Development"
CSDB ID 21490 (all data & tools)

Engineering (Beijing) 2024, "Antibodies targeting a conserved surface polysaccharide are protective against a wide range of microbial pathogens producing β-1–6-linked poly-N-acetylglucosamine (PNAG)"
CSDB ID 15645 (all data & tools)

Compound ID: 7886

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Compound ID: 8505

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Compound ID: 8551

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Structure type: homopolymer
Trivial name: PNAG, polysaccharide intercellular adhesin (PIA)
Compound class: EPS
Reference(s) to other database(s): GTC:G11006VI

Carbohydrate Research 2009, "Efficient synthesis and protein conjugation of β-(1→6)-d-N-acetylglucosamine oligosaccharides from the polysaccharide intercellular adhesin"
CSDB ID 24080 (all data & tools)
Compound ID: 10592

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Structure type: homopolymer
Compound class: O-polysaccharide
Reference(s) to other database(s): GTC:G96228KD

BOOK: Bacterial lipopolysaccharides: Structure, chemical synthesis, biogenesis and interaction with host cells; Eds.: Knirel YA, Valvano MA; Springer 2011, "Structure of O-antigens"
CSDB ID 27895 (all data & tools)

Compound ID: 12852

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Compound ID: 13297

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Structure type: polymer chemical repeating unit
Compound class: EPS, glucan
Reference(s) to other database(s): GTC:G06401NN

Current Medicinal Chemistry 2013, "An overview on natural polysaccharides with antioxidant properties"
CSDB ID 47195 (all data & tools)

Compound ID: 14444

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Compound ID: 15827

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