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1. (Article ID: 3908)
Niedziela T, Jachymek W, Lukasiewicz J, Maciejewska A, Andersson R, Kenne L, Lugowski C
Structures of two novel, serologically nonrelated core oligosaccharides of Yokenella regensburgei lipopolysaccharides differing only by a single hexose substitution
Glycobiology 20(2) (2010)
207-214
Immunochemical analysis of the Yokenella regensburgei lipopolysaccharides (LPS) indicated the presence of the core oligosaccharide-related immunotypes among the investigated strains. The structure of the core oligosaccharide segment of the Y. regensburgei LPS has been investigated using chemical methods, mass spectrometry, and (1)H, (13)C NMR spectroscopy. It was concluded that the core oligosaccharides of the strains PCM 2476 and PCM 2477 are composed of an undecasaccharide. The combined data revealed two immunotypes of the core oligosaccharide recognized by antibodies against the whole bacterial cells. The structural differences between the core oligosaccharides are limited to the outermost terminal hexopyranose residue. In the core oligosaccharide of the strain PCM 2476, it was identified as α-D-Glcp and in that of the strain PCM 2477 as α-D-Galp. This subtle difference between the glycoforms of the LPS core appeared to be essential for formation of the epitopes recognized by the specific antibodies directed against the Y. regensburgei whole bacterial cells. The oligosaccharides are not substituted by phosphate groups. Instead, the carboxyl groups of Kdo and galacturonic acid residues present in the core provide the negative charges. The undecasaccharides represent a novel core type of bacterial LPS, which is characteristic for Y. regensburgei.
lipopolysaccharides, core oligosaccharide, NMR spectroscopy, immunotypes, Yokenella
NCBI PubMed ID: 19880424Publication DOI: 10.1093/glycob/cwp167Journal NLM ID: 9104124Publisher: IRL Press at Oxford University Press
Correspondence: T. Niedziela
iitd.pan.wroc.pl>
Institutions: Department of Immunochemistry, L. Hirszfeld Institute of Immunology and Experimental Therapy, Polish Academy of Sciences, Wroclaw, Poland, Department of Immunochemistry, L. Hirszfeld Institute of Immunology and Experimental Therapy, Polish Academy of Sciences,Wroclaw, Poland
Methods: 13C NMR, 1H NMR, NMR-2D, GC-MS, SDS-PAGE, ELISA, MALDI-TOF MS, serological methods, immunoblotting
The publication contains the following compound(s):
- Compound ID: 2376
|
-3)-a-D-FucpNAc-(1-2)-L-gro-a-D-manHepp-(1-3)-a-L-6dTalp2Ac4Ac-(1- |
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Structure type: polymer chemical repeating unit
Compound class: O-polysaccharide
Reference(s) to other database(s): GTC:G75630LJ, GlycomeDB:
25661
- Compound ID: 9123
|
b-D-GalpA-(1-7)-L-gro-a-D-manHepp-(1-7)-+
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L-gro-a-D-manHepp-(1-2)-+ | b-D-Glcp-(1-4)-+
| | |
a-D-Glcp-(1-6)-a-D-Glcp-(1-4)-a-D-GlcpN-(1-4)-a-D-GalpA-(1-3)-L-gro-a-D-manHepp-(1-3)-L-gro-a-D-manHepp-(1-5)-a-Kdo |
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Structure type: oligomer
Compound class: core oligosaccharide
Reference(s) to other database(s): GTC:G94009AA, GlycomeDB:
37891
- Compound ID: 9124
|
b-D-GalpA-(1-7)-L-gro-a-D-manHepp-(1-7)-+
|
L-gro-a-D-manHepp-(1-2)-+ | b-D-Glcp-(1-4)-+
| | |
a-D-Galp-(1-6)-a-D-Glcp-(1-4)-a-D-GlcpN-(1-4)-a-D-GalpA-(1-3)-L-gro-a-D-manHepp-(1-3)-L-gro-a-D-manHepp-(1-5)-a-Kdo |
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Structure type: oligomer
Compound class: core oligosaccharide
Reference(s) to other database(s): GTC:G97024BX, GlycomeDB:
37892
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