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1. (Article ID: 4031)
Hankins JV, Madsen JA, Giles DK, Childers BM, Klose KE, Brodbelt JS, Trent MS
Elucidation of a novel Vibrio cholerae lipid A secondary hydroxy-acyltransferase and its role in innate immune recognition
Molecular Microbiology 81(5) (2011)
1313-1329
Similar to most Gram-negative bacteria, the outer leaflet of the outer membrane of Vibrio cholerae is comprised of lipopolysaccharide. Previous reports have proposed that V. cholerae serogroups O1 and O139 synthesize structurally different lipid A domains, which anchor lipopolysaccharide within the outer membrane. In the current study, intact lipid A species of V. cholerae O1 and O139 were analysed by mass spectrometry. We demonstrate that V. cholerae serogroups associated with human disease synthesize a similar asymmetrical hexa-acylated lipid A species, bearing a myristate (C14:0) and 3-hydroxylaurate (3-OH C12:0) at the 2'- and 3'-positions respectively. A previous report from our laboratory characterized the V. cholerae LpxL homologue Vc0213, which transfers a C14:0 to the 2'-position of the glucosamine disaccharide. Our current findings identify V. cholerae Vc0212 as a novel lipid A secondary hydroxy-acyltransferase, termed LpxN, responsible for transferring the 3-hydroxylaurate (3-OH C12:0) to the V. cholerae lipid A domain. Importantly, the presence of a 3-hydroxyl group on the 3'-linked secondary acyl chain was found to promote antimicrobial peptide resistance in V. cholerae; however, this functional group was not required for activation of the innate immune response.
Lipopolysaccharide, lipid A, mass spectrometry, Vibrio cholerae
NCBI PubMed ID: 21752109Journal NLM ID: 8712028Publisher: Blackwell Publishing
Correspondence: strent

mail.utexas.edu
Institutions: Department of Biochemistry and Molecular Biology, Georgia Health Sciences University, Augusta, GA 30912, USA, Department of Chemistry and Biochemistry, Section of Molecular Genetics and Microbiology, The Institute of Cellular and Molecular Biology, The University of Texas at Austin, Austin, TX 78712, USA, South Texas Center for Emerging Infectious Diseases and Department of Biology, The University of Texas at San Antonio, San Antonio, TX 78249, USA
Methods: GC-MS, DNA techniques, GC, MALDI-TOF MS, genetic methods, CID-MS
The publication contains the following compound(s):
- Compound ID: 3778
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3HOMyr-(1-2)-+
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P-4)-+ |
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3HOMyr-(1-2)-+ | |
| | |
a-Kdop-(2-4)-a-Kdop-(2-6)-b-D-Glcp-(1-6)-a-D-Glcp-(1-P
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3HOMyr-(1-3)-+ |
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3HOMyr-(1-3)-+ |
Show graphically |
Structure type: oligomer
Trivial name: Kdo2-lipid IVA
Compound class: lipid A
- Compound ID: 8886
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3HOMyr-(1-2)-+
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P-4)-+ |
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Lau-(1-3)-3HOMyr-(1-2)-+ | |
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a-Kdop-(2-4)-a-Kdop-(2-6)-b-D-Glcp-(1-6)-a-D-Glcp-(1-P
| |
Myr-(1-3)-3HOMyr-(1-3)-+ |
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3HOMyr-(1-3)-+ |
Show graphically |
Structure type: oligomer
Compound class: lipid A
- Compound ID: 9488
|
3HOMyr-(1-2)-+
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3HOMyr-(1-3)-+ |
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3HOMyr-(1-2)-b-D-Glcp-(1-6)-a-D-Glcp-(1-P
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P-4)-+ |
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3HOMyr-(1-3)-+ |
Show graphically |
Structure type: oligomer
Compound class: lipid A
- Compound ID: 9489
|
3HOMyr-(1-2)-+
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P-4)-+ |
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Lau-(1-3)-3HOMyr-(1-2)-+ | |
| | |
a-Kdop-(2-4)-a-Kdop-(2-6)-b-D-Glcp-(1-6)-a-D-Glcp-(1-P
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3HOMyr-(1-3)-+ |
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3HOMyr-(1-3)-+ |
Show graphically |
Structure type: oligomer
Compound class: lipid A
- Compound ID: 9493
|
3HOMyr-(1-2)-+
|
P-4)-+ |
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Myr-(1-3)-3HOMyr-(1-2)-+ | |
| | |
3HOLau-(1-3)-3HOLau-(1-3)-b-D-Glcp-(1-6)-a-D-Glcp-(1-P
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P-4)-a-Kdop-(2-6)-+ |
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3HOLau-(1-3)-+ |
Show graphically |
Structure type: oligomer
Compound class: lipid A
- Compound ID: 9494
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Myr-(1-3)-3HOMyr-(1-2)-+
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P-4)-+ |
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P-4)-a-Kdop-(2-6)-+ | |
| | |
Myr-(1-3)-3HOMyr-(1-2)-b-D-Glcp-(1-6)-a-D-Glcp-(1-P
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3HOLau-(1-3)-+ |
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3HOLau-(1-3)-+ |
Show graphically |
Structure type: oligomer
Compound class: lipid A
- Compound ID: 9495
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Myr-(1-3)-3HOMyr-(1-2)-+
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P-4)-+ |
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Lau-(1-3)-3HOLau-(1-3)-+ | |
| | |
Lau-(1-3)-3HOMyr-(1-2)-b-D-Glcp-(1-6)-a-D-Glcp-(1-P
| |
P-4)-a-Kdop-(2-6)-+ |
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Pam-(1-3)-3HOLau-(1-3)-+ |
Show graphically |
Structure type: oligomer
Compound class: lipid A
- Compound ID: 9490
|
3HOMyr-(1-2)-+
|
3HOLau-(1-3)-+ |
| |
3HOMyr-(1-2)-b-D-Glcp-(1-6)-a-D-Glcp-(1-P
| |
P-4)-+ |
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3HOLau-(1-3)-+ |
Show graphically |
Structure type: oligomer
Compound class: lipid A
- Compound ID: 9491
|
3HOMyr-(1-2)-+
|
P-4)-+ |
| |
3HOMyr-(1-2)-+ | |
| | |
P-4)-a-Kdop-(2-6)-b-D-Glcp-(1-6)-a-D-Glcp-(1-P
| |
3HOLau-(1-3)-+ |
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3HOLau-(1-3)-+ |
Show graphically |
Structure type: oligomer
Compound class: lipid A
- Compound ID: 9492
|
3HOMyr-(1-2)-+
|
P-4)-+ |
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P-4)-a-Kdop-(2-6)-+ | |
| | |
Myr-(1-3)-3HOMyr-(1-2)-b-D-Glcp-(1-6)-a-D-Glcp-(1-P
| |
3HOLau-(1-3)-+ |
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3HOLau-(1-3)-+ |
Show graphically |
Structure type: oligomer
Compound class: lipid A
- Compound ID: 9496
|
3HOMyr-(1-2)-+
|
3HOLau-(1-3)-+ |
| |
Myr-(1-3)-3HOMyr-(1-2)-b-D-Glcp-(1-6)-a-D-Glcp-(1-P
| |
P-4)-+ |
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3HOLau-(1-3)-+ |
Show graphically |
Structure type: oligomer
Compound class: lipid A
- Compound ID: 9497
|
3HOMyr-(1-2)-+
|
Lau-(1-3)-3HOLau-(1-3)-+ |
| |
Myr-(1-3)-3HOMyr-(1-2)-b-D-Glcp-(1-6)-a-D-Glcp-(1-P
| |
P-4)-+ |
|
3HOLau-(1-3)-+ |
Show graphically |
Structure type: oligomer
Compound class: lipid A
- Compound ID: 9498
|
3HOMyr-(1-2)-+
|
3HOMyr-(1-3)-+ |
| |
Lau-(1-3)-3HOMyr-(1-2)-b-D-Glcp-(1-6)-a-D-Glcp-(1-P
| |
P-4)-+ |
|
3HOMyr-(1-3)-+ |
Show graphically |
Structure type: oligomer
Compound class: lipid A
- Compound ID: 9499
|
3HOMyr-(1-2)-+
|
Lau-(1-3)-3HOMyr-(1-2)-+ |
| |
3HOLau-(1-3)-3HOMyr-(1-3)-b-D-Glcp-(1-6)-a-D-Glcp-(1-P
| |
P-4)-+ |
|
3HOMyr-(1-3)-+ |
Show graphically |
Structure type: oligomer
Compound class: lipid A
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2. (Article ID: 4133)
Wang Z, Yang B, Zhang Z, Ly M, Takieddin M, Mousa S, Liu J, Dordick JS, Linhardt RJ
Control of the heparosan N-deacetylation leads to an improved bioengineered heparin
Applied Microbiology and Biotechnology 91(1) (2011)
91-99
The production of the anticoagulant drug heparin from non-animal sources has a number of advantages over the current commercial production of heparin. These advantages include better source material availability, improved quality control, and reduced concerns about animal virus or prion impurities. A bioengineered heparin would have to be chemically and biologically equivalent to be substituted for animal-sourced heparin as a pharmaceutical. In an effort to produce bioengineered heparin that more closely resembles pharmaceutical heparin, we have investigated a key step in the process involving the N-deacetylation of heparosan. The extent of N-deacetylation directly affects the N-acetyl/N-sulfo ratio in bioengineered heparin and also impacts its molecular weight. Previous studies have demonstrated that the presence and quantity of N-acetylglucosamine in the nascent glycosaminoglycan chain, serving as the substrate for the subsequent enzymatic modifications (C5 epimerization and O-sulfonation), can impact the action of these enzymes and, thus, the content and distribution of iduronic acid and O-sulfo groups. In this study, we control the N-deacetylation of heparosan to produce a bioengineered heparin with an N-acetyl/N-sulfo ratio and molecular weight that is similar to animal-sourced pharmaceutical heparin. The structural composition and anticoagulant activity of the resultant bioengineered heparin was extensively characterized and compared to pharmaceutical heparin obtained from porcine intestinal mucosa.
heparin, deacetylation, Heparosan, porcine intestine
NCBI PubMed ID: 21484210Journal NLM ID: 8406612Publisher: Springer
Correspondence: linhar

rpi.edu
Institutions: Department of Chemistry and Chemical Biology, Rensselaer Polytechnic Institute, Troy, NY 12180, USA, Department of Biology, Rensselaer Polytechnic Institute, Troy, NY 12180, USA, The Pharmaceutical Research Institute, Albany College of Pharmacy and Health Sciences, Albany, NY 12208, USA, Division of Medicinal Chemistry and Natural Products, Eshelman School of Pharmacy, University of North Carolina, Chapel Hill, NC 27599, USA
Methods: 1H NMR, de-N-acetylation, enzymatic modification, PAGE, LC-MS, SEC, fermentation, anticoagulation activity, N-sulfonation
The publication contains the following compound(s):
- Compound ID: 886
Structure type: polymer chemical repeating unit
Trivial name: K5 polysaccharide, K-antigen, N-acetyl heparosan, heparosan (N-acetylheparosan), heparosan, heparosan (glycosaminoglycan GAG), K5 CPS, heparosan (K5-antigen), N-acetylheparosan
Compound class: CPS, EPS, K-antigen, polysaccharide
Reference(s) to other database(s): GTC:G26089XS, GlycomeDB:
656
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3. (Article ID: 4134)
Watson DC, Leclerc S, Wakarchuk WW, Young NM
Enzymatic synthesis and properties of glycoconjugates with legionaminic acid as a replacement for neuraminic acid
Glycobiology 21(1) (2011)
99-108
In addition to sialic acid, bacteria produce several other nonulosonic acids, including legionaminic acid (Leg). This has exactly the same stereochemistry as sialic acid, with the added features of 9-deoxy and 7-amino groups. In order to explore the biological effects of replacing sialic acid residues (Neu5Ac) in glycoconjugates with Leg in its diacetylated form, diacetyllegionaminic acid (Leg5Ac7Ac), we tested CMP-Leg5Ac7Ac as a donor substrate with a selection of bacterial and mammalian sialyltransferases. The CMP-Leg5Ac7Ac was synthesized in vitro by means of cloned enzymes from the bacillosamine portion of the Campylobacter jejuni N-glycan pathway and from the Leg pathway of Legionella pneumophila. Using fluorescent derivatives of lactose, Galβ1,4GlcNAcβ and T-antigen (Galβ1,3GalNAcα) as acceptors, we tested eight different sialyltransferases and found that the Pasteurella multocida PM0188h and porcine ST3Gal1 sialyltransferases were significantly active with CMP-Leg5Ac7Ac, showing approximately 60% activity when compared with CMP-Neu5Ac. The Photobacterium α2,6 sialyltransferase was weakly active, with approximately 6% relative activity. The Leg5Ac7Ac-α-2,3-lactose product was then tested as a substrate with six sialidases of viral, bacterial and mammalian origin. All showed much lower activities than with the corresponding sialic acid substrate, with the influenza virus N1 being the most active and human NEU2 being the least active. These results show the feasibility of producing glycoconjugates with Leg5Ac7Ac residues as the terminal sugars, which should display novel biological properties.
sialyltransferase, sialic acid, legionaminic acid, glycoconjugate, neuraminidase
NCBI PubMed ID: 20978010Publication DOI: 10.1093/glycob/cwq135Journal NLM ID: 9104124Publisher: IRL Press at Oxford University Press
Correspondence: martin.young

nrc-cnrc.gc.ca
Institutions: Institute for Biological Sciences, National Research Council of Canada, 100 Sussex Drive, Ottawa, Ontario, Canada
Methods: DNA cloning, genetic methods, biochemical methods, CE-MS, CE
The publication contains the following compound(s):
- Compound ID: 6974
Structure type: monomer
Trivial name: UDP-2-acetamido-2,4,6-trideoxy-α-D-glucopyranose, UPD-2-acetamido-4-amino-2,4,6-trideoxy-α-D-glucopyranose, UDP-2-N-acetyl-bacillosamine (UDP-Bac2Ac)
Compound class: nucleoside diphosphate sugar
- Compound ID: 7508
Structure type: monomer
Trivial name: CMP-5,7-diacetamido-3,5,7,9-tetradeoxy-D-glycero-D-galacto-non-2-ulosonic (CMP-Leg5Ac7AC), CMP-5,7-diacetamido-3,5,7,9-tetradeoxy-D-glycero-β-D-galacto-non-2-ulosonic acid, CMP-legionaminic acid, CMP-N,N'-diacetyllegionaminic acid, CMP-Leg5Ac7Ac
- Compound ID: 7605
Structure type: monomer
Trivial name: UDP-2,4-diacetamido-2,4,6-trideoxy-α-D-glucopyranose, UDP-2,4-diacetamido-Bacillose, UDP-N,N-diacetylbacillosamine, UPD-2,4-diacetamido-2,4,6-trideoxy-α-D-glucopyranose, UDP-N,N'-diacetyl-bacillosamine, UDP-Bac2Ac4Ac, UDP-diNAcBac
Compound class: nucleoside diphosphate sugar
- Compound ID: 9930
Structure type: oligomer
Aglycon: FCHASE
Trivial name: α-2,3-Leg5Ac7Ac-lactose-FCHASE
Reference(s) to other database(s): GTC:G55526DY
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