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Ohno N, Uchiyama M, Tsuzuki A, Tokunaka K, Miura NN, Adachi Y, Aizawa MW, Tamura H, Tanaka S, Yadomae T
Solubilization of yeast cell-wall beta-(1→3)-D-glucan by sodium hypochlorite oxidation and dimethyl sulfoxide extraction
Carbohydrate Research 316 (1999)
161-172
Candida albicans 1385
(Ancestor NCBI TaxID 5476,
species name lookup)
Candida albicans 1594
(Ancestor NCBI TaxID 5476,
species name lookup)
Candida albicans 0583
(Ancestor NCBI TaxID 5476,
species name lookup)
Candida parapsilosis 0640
(Ancestor NCBI TaxID 5480,
species name lookup)
Candida parapsilosis 0708
(Ancestor NCBI TaxID 5480,
species name lookup)
Candida parapsilosis 1068
(Ancestor NCBI TaxID 5480,
species name lookup)
Saccharomyces cerevisiae
(NCBI TaxID 4932,
species name lookup)
Taxonomic group: fungi / Ascomycota
(Phylum: Ascomycota)
Organ / tissue: cell wall
Publication DOI: 10.1016/S0008-6215(99)00049-XJournal NLM ID: 0043535Publisher: Elsevier
Correspondence: Naohito Ohno <ohnonao

ps.toyaku.ac.jp>
Institutions: Tokyo University of Pharmacy and Life Science, School of Pharmacy, Tokyo, Japan, Seikagaku Corporation, 3-1253 Tateno, Higashiyamato, Tokyo 207-0021, Japan
The limulus test is a well-established method for the diagnosis of both Gram-negative sepsis and invasive fungal infection. To diagnose fungal infections, a β-(1→3)-D-glucan-specific chromogenic kit (Fungitec G test MK) has been developed and applied clinically. We are concentrating our main efforts on developing a better standard to improve the precision of this method. To this end, we have successfully developed a protocol to obtain a soluble Candida spp. β-(1→3)-D-glucan (CSBG) by sodium hypochlorite (NaClO) oxidation and subsequent dimethyl sulfoxide (Me2SO) extraction (yield of 9.6 +/- 4.1%) of acetone-dried whole-cell preparations. The β-glucan fraction is free from the cell-wall mannan, gives a symmetrical peak by gel filtration, and is soluble in dilute NaOH. The product is composed mainly of β-(1→3)- and β-(1→6)-D-glucosidic linkages. The specific activity of the β-glucan is comparable with pachyman when combined with the Fungitec G test as the standard glucan and reacted as low as 10(-11) g/mL.
cell wall, MALDIMS, β-glucan, Candida spp., limulus test
Structure type: structural motif or average structure
Location inside paper: GSBG (fig. 8)
Trivial name: β-1,3-glucan
Compound class: EPS, O-polysaccharide, cell wall polysaccharide, glucan
Contained glycoepitopes: IEDB_1397514,IEDB_142488,IEDB_146664,IEDB_153543,IEDB_158555,IEDB_161166,IEDB_2278476,IEDB_2278477,IEDB_558869,IEDB_857743,IEDB_983931,SB_192
Methods: 13C NMR, 1H NMR, ELISA, antitumor activity assay, MALDI-TOF-MS, phenol-sulfuric acid method, capillary GLC, limulus test, NaClO oxidation, Me2SO extraction, zymolyase digestion
Biological activity: immunomodulating activity; antitumor activity
Comments, role: part of suggested beta-(1->3)/(1->6) structure
Related record ID(s): 40623
NCBI Taxonomy refs (TaxIDs): 5476,
5480,
4932Reference(s) to other database(s): GTC:G51056AN
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There is only one chemically distinct structure:
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Ohno N, Uchiyama M, Tsuzuki A, Tokunaka K, Miura NN, Adachi Y, Aizawa MW, Tamura H, Tanaka S, Yadomae T
Solubilization of yeast cell-wall beta-(1→3)-D-glucan by sodium hypochlorite oxidation and dimethyl sulfoxide extraction
Carbohydrate Research 316 (1999)
161-172
Candida albicans 1385
(Ancestor NCBI TaxID 5476,
species name lookup)
Candida albicans 1594
(Ancestor NCBI TaxID 5476,
species name lookup)
Candida albicans 0583
(Ancestor NCBI TaxID 5476,
species name lookup)
Candida parapsilosis 0640
(Ancestor NCBI TaxID 5480,
species name lookup)
Candida parapsilosis 0708
(Ancestor NCBI TaxID 5480,
species name lookup)
Candida parapsilosis 1068
(Ancestor NCBI TaxID 5480,
species name lookup)
Saccharomyces cerevisiae
(NCBI TaxID 4932,
species name lookup)
Taxonomic group: fungi / Ascomycota
(Phylum: Ascomycota)
Organ / tissue: cell wall
Publication DOI: 10.1016/S0008-6215(99)00049-XJournal NLM ID: 0043535Publisher: Elsevier
Correspondence: Naohito Ohno <ohnonao

ps.toyaku.ac.jp>
Institutions: Tokyo University of Pharmacy and Life Science, School of Pharmacy, Tokyo, Japan, Seikagaku Corporation, 3-1253 Tateno, Higashiyamato, Tokyo 207-0021, Japan
The limulus test is a well-established method for the diagnosis of both Gram-negative sepsis and invasive fungal infection. To diagnose fungal infections, a β-(1→3)-D-glucan-specific chromogenic kit (Fungitec G test MK) has been developed and applied clinically. We are concentrating our main efforts on developing a better standard to improve the precision of this method. To this end, we have successfully developed a protocol to obtain a soluble Candida spp. β-(1→3)-D-glucan (CSBG) by sodium hypochlorite (NaClO) oxidation and subsequent dimethyl sulfoxide (Me2SO) extraction (yield of 9.6 +/- 4.1%) of acetone-dried whole-cell preparations. The β-glucan fraction is free from the cell-wall mannan, gives a symmetrical peak by gel filtration, and is soluble in dilute NaOH. The product is composed mainly of β-(1→3)- and β-(1→6)-D-glucosidic linkages. The specific activity of the β-glucan is comparable with pachyman when combined with the Fungitec G test as the standard glucan and reacted as low as 10(-11) g/mL.
cell wall, MALDIMS, β-glucan, Candida spp., limulus test
Structure type: structural motif or average structure
Location inside paper: GSBG (fig. 8)
Trivial name: β-1,6-glucan
Compound class: EPS, cell wall polysaccharide, glucan
Contained glycoepitopes: IEDB_135614,IEDB_141806,IEDB_142488,IEDB_146664,IEDB_241101,IEDB_983931,SB_192
Methods: 13C NMR, 1H NMR, ELISA, antitumor activity assay, MALDI-TOF-MS, phenol-sulfuric acid method, capillary GLC, limulus test, NaClO oxidation, Me2SO extraction, zymolyase digestion
Biological activity: immunomodulating activity; antitumor activity
Comments, role: part of suggested beta-(1->3)/(1->6) structure
Related record ID(s): 40446
NCBI Taxonomy refs (TaxIDs): 5476,
5480,
4932Reference(s) to other database(s): GTC:G26777BZ
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There is only one chemically distinct structure:
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Ishibashi K, Miura NN, Adachi Y, Ogura N, Tamura H, Tanaka S, Ohno N
Relationship between the physical properties of Candida albicans cell well β-glucan and activation of leukocytes in vitro
International Immunopharmacology 2(8) (2002)
1109-1022
Candida albicans IFO 1385
(Ancestor NCBI TaxID 5476,
species name lookup)
Taxonomic group: fungi / Ascomycota
(Phylum: Ascomycota)
Organ / tissue: cell wallAssociated disease: fulminant candidiasis [ICD11:
1F23 
, ICD11:
XN3CL 
]
The structure was elucidated in this paperNCBI PubMed ID: 12349948Publication DOI: 10.1016/s1567-5769(02)00062-0Journal NLM ID: 100965259Publisher: Amsterdam; New York: Elsevier Science
Correspondence: Naohito Ohno <ohnonao

ps.toyaku.ac.jp>
Institutions: Laboratory for Immunopharmacology of Microbial Products, School of Pharmacy, Tokyo University of Pharmacy and Life Science, Tokyo, Japan, Tokyo Research Institute, Seikagaku Corporation, Tokyo, Japan
We previously reported that the fungal particle 1,3-β-D-glucan derived from Candida albicans, a pathogenic fungus, was obtained by oxidation of the cell wall with sodium hypochlorite (NaClO). It could be solubilized by treatment with dimethylsulfoxide (DMSO). In the present study, we prepared Candida 1,3-β-D-glucan having different physical properties, and examined the relationship between leukocyte activation and the physicochemical properties. β-glucan activated leukocytes significantly more effectively in a particulate than solubilized form in terms of TNF-α production by RAW 264.7 cells, hydrogen peroxide production by murine PEC and IL-8 production by human PBMC. Furthermore, we compared the biological activity of the glucan particles oxidized under various conditions. Interestingly, inactive and antagonistic particles were obtained under strong oxidation conditions. However, the inactive particles showed significant agonistic activity on dissolution in DMSO and following lyophilization. These facts strongly suggested that the solubility and assembly of the components influence the immunopharmacological activities of 1,3-β-D-glucans.
assembly, leukocyte, β-glucan, NaClO, DMSO
Structure type: structural motif or average structure
Location inside paper: Chart 1, OX-CA (particulate glucan fraction)
Compound class: glucan
Contained glycoepitopes: IEDB_135614,IEDB_1397514,IEDB_141806,IEDB_142488,IEDB_146664,IEDB_153543,IEDB_158555,IEDB_161166,IEDB_161167,IEDB_2278476,IEDB_2278477,IEDB_241101,IEDB_558866,IEDB_558869,IEDB_857743,IEDB_983931,SB_192
Methods: 1H NMR, ELISA, GLC, microscopy, dialysis, flow cytometry analysis, phenol-sulfuric acid assay, centrifugation, ultrasonication, NaClO oxidation, zymolyase digestion, TFA hydrolysis
Biological activity: activates macrophages, particulate fraction activates leukocytes to a greater extent than the soluble form
Enzymes that release or process the structure: zymolyase
Related record ID(s): 42371
NCBI Taxonomy refs (TaxIDs): 5476Reference(s) to other database(s): GTC:G63359BT
Show glycosyltransferases
NMR conditions: in D2O at 333(H) K
[as TSV]
1H NMR data: present in publication
|
There is only one chemically distinct structure:
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Ishibashi K, Miura NN, Adachi Y, Ogura N, Tamura H, Tanaka S, Ohno N
Relationship between the physical properties of Candida albicans cell well β-glucan and activation of leukocytes in vitro
International Immunopharmacology 2(8) (2002)
1109-1022
Candida albicans IFO 1385
(Ancestor NCBI TaxID 5476,
species name lookup)
Taxonomic group: fungi / Ascomycota
(Phylum: Ascomycota)
Organ / tissue: cell wallAssociated disease: fulminant candidiasis [ICD11:
1F23 
, ICD11:
XN3CL 
]
The structure was elucidated in this paperNCBI PubMed ID: 12349948Publication DOI: 10.1016/s1567-5769(02)00062-0Journal NLM ID: 100965259Publisher: Amsterdam; New York: Elsevier Science
Correspondence: Naohito Ohno <ohnonao

ps.toyaku.ac.jp>
Institutions: Laboratory for Immunopharmacology of Microbial Products, School of Pharmacy, Tokyo University of Pharmacy and Life Science, Tokyo, Japan, Tokyo Research Institute, Seikagaku Corporation, Tokyo, Japan
We previously reported that the fungal particle 1,3-β-D-glucan derived from Candida albicans, a pathogenic fungus, was obtained by oxidation of the cell wall with sodium hypochlorite (NaClO). It could be solubilized by treatment with dimethylsulfoxide (DMSO). In the present study, we prepared Candida 1,3-β-D-glucan having different physical properties, and examined the relationship between leukocyte activation and the physicochemical properties. β-glucan activated leukocytes significantly more effectively in a particulate than solubilized form in terms of TNF-α production by RAW 264.7 cells, hydrogen peroxide production by murine PEC and IL-8 production by human PBMC. Furthermore, we compared the biological activity of the glucan particles oxidized under various conditions. Interestingly, inactive and antagonistic particles were obtained under strong oxidation conditions. However, the inactive particles showed significant agonistic activity on dissolution in DMSO and following lyophilization. These facts strongly suggested that the solubility and assembly of the components influence the immunopharmacological activities of 1,3-β-D-glucans.
assembly, leukocyte, β-glucan, NaClO, DMSO
Structure type: structural motif or average structure
Location inside paper: Chart 1, CSBG(soluble fraction)
Trivial name: pachyman, sparan, polycan
Compound class: EPS, cell wall polysaccharide, glucan, polysaccharide
Contained glycoepitopes: IEDB_1397514,IEDB_141806,IEDB_142488,IEDB_146664,IEDB_153543,IEDB_158555,IEDB_161166,IEDB_161167,IEDB_2278476,IEDB_2278477,IEDB_241101,IEDB_558869,IEDB_857743,IEDB_983931,SB_192
Methods: 1H NMR, ELISA, GLC, microscopy, dialysis, flow cytometry analysis, phenol-sulfuric acid assay, centrifugation, ultrasonication, NaClO oxidation, zymolyase digestion, TFA hydrolysis
Biological activity: activates macrophages, particulate fraction activates leukocytes to a greater extent than the soluble form
Enzymes that release or process the structure: zymolyase
Related record ID(s): 42370
NCBI Taxonomy refs (TaxIDs): 5476Reference(s) to other database(s): GTC:G83138WS
Show glycosyltransferases
NMR conditions: in D2O at 333(H) K
[as TSV]
1H NMR data: present in publication
|
There is only one chemically distinct structure:
Expand this record
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