Found 2 publications.
Displayed publications from 1 to 2
Expand all publications
Collapse all publications
Show all as text (SweetDB notation)
Show all graphically (SNFG notation)
1. (Article ID: 405)
Vinion-Dubiel AD, Goldberg JB
Lipopolysaccharide of Burkholderia cepacia complex
Journal of Endotoxin Research 9(4) (2003)
201-213
Burkholderia cepacia complex (Bcc) is a group of phenotypically similar, genetically distinct bacteria that are beneficial to the environment but can also cause severe human infections. Bcc are being exploited for use as bioremediation agents and as a way to combat agricultural plant diseases. However, Bcc can cause lung infections in patients with chronic granulomatous disease or cystic fibrosis often resulting in mortality of these patients. Since it is unclear what bacterial components are necessary for causing human infections, studies of Bcc have focused on identifying putative virulence factors. As in other Gram-negative bacteria, the lipopolysaccharide (LPS) of Bcc induces a strong immune response that can contribute to host cell damage. The unusual structure of Bcc LPS lowers the anionic charge of the Bcc cell surface, which inhibits the binding and subsequent effects of cationic antibiotics. These distinguishing features include the substitution of a Ko for a Kdo residue in the inner core oligosaccharide and Ara4N residues bound to phosphates of the lipid A backbone. The structures of O antigen subunits and the consequent serotypes will also be discussed, with particular reference to the O antigen biosynthetic loci of two Bcc strains.
Lipopolysaccharide, structure, Burkholderia, Burkholderia cepacia, O-antigen, complex, endotoxin, Re
NCBI PubMed ID: 12935351Publication DOI: 10.1177/09680519030090040101Journal NLM ID: 9433350Publisher: Maney Publishing
Institutions: Department of Microbiology, University of Virginia Health Sciences Center, Charlottesville, VA 22908-0734, USA
The publication contains the following compound(s):
- Compound ID: 1294
Structure type: polymer chemical repeating unit
Compound class: O-polysaccharide, O-antigen
Reference(s) to other database(s): GTC:G40176QY, GlycomeDB:
25355
- Compound ID: 1297
Structure type: polymer chemical repeating unit
Compound class: EPS
- Compound ID: 1298
|
b-D-Gal-(1-6)-+
|
b-D-Galp-(1-2)-a-D-Rhap-(1-4)-+ |
| |
-3)-b-D-Glcp-(1-3)-a-D-GlcpA-(1-3)-a-D-Manp-(1-
|
a-D-Galp-(1-2)-+ |
Show graphically |
Structure type: polymer chemical repeating unit
Compound class: EPS
Reference(s) to other database(s): GTC:G25012DR
- Compound ID: 1277
Structure type: polymer chemical repeating unit
Compound class: O-polysaccharide, O-antigen
Reference(s) to other database(s): GTC:G84739NX, GlycomeDB:
3434
- Compound ID: 1278
Structure type: polymer chemical repeating unit
Compound class: O-polysaccharide, O-antigen
Reference(s) to other database(s): GTC:G62101YT, GlycomeDB:
3585
- Compound ID: 26
Structure type: polymer chemical repeating unit
Compound class: O-polysaccharide, O-antigen
Reference(s) to other database(s): GTC:G37099RV, GlycomeDB:
25434
- Compound ID: 27
Structure type: polymer chemical repeating unit
Trivial name: mannan
Compound class: O-polysaccharide, O-antigen
Reference(s) to other database(s): GTC:G40440IC, GlycomeDB:
27903
- Compound ID: 240
Structure type: polymer chemical repeating unit
Trivial name: neutral glycan
Compound class: O-polysaccharide, O-antigen, LPS
Reference(s) to other database(s): GTC:G46905WE, GlycomeDB:
3417, CCSD:
12532, CBank-STR:2856
- Compound ID: 1292
Structure type: polymer chemical repeating unit
Compound class: O-polysaccharide, O-antigen
Reference(s) to other database(s): GTC:G96363IL, GlycomeDB:
3438
- Compound ID: 1279
Structure type: polymer chemical repeating unit
Compound class: O-polysaccharide, O-antigen
Reference(s) to other database(s): GTC:G89062YH, GlycomeDB:
3437
- Compound ID: 1280
Structure type: polymer chemical repeating unit
Compound class: O-polysaccharide, O-antigen
Reference(s) to other database(s): GTC:G78324BK, GlycomeDB:
2534
- Compound ID: 940
Structure type: polymer chemical repeating unit
Compound class: O-polysaccharide, O-antigen
Reference(s) to other database(s): GTC:G50210GF, GlycomeDB:
27103
- Compound ID: 1281
Structure type: polymer chemical repeating unit
Compound class: O-polysaccharide, O-antigen
Reference(s) to other database(s): GTC:G99607IJ, GlycomeDB:
3440
- Compound ID: 1282
Structure type: polymer chemical repeating unit
Compound class: O-polysaccharide, O-antigen
Reference(s) to other database(s): GTC:G62219GM, GlycomeDB:
3439
- Compound ID: 1293
Structure type: polymer chemical repeating unit
Compound class: O-polysaccharide, O-antigen
Reference(s) to other database(s): GTC:G78814IK, GlycomeDB:
3436
- Compound ID: 1283
Structure type: polymer chemical repeating unit
Compound class: O-polysaccharide, O-antigen
Reference(s) to other database(s): GTC:G11401HK, GlycomeDB:
3435, CCSD:
12565, CBank-STR:2460
- Compound ID: 1284
Structure type: polymer chemical repeating unit
Compound class: O-polysaccharide, O-antigen
Reference(s) to other database(s): GTC:G99774AJ, GlycomeDB:
3441
- Compound ID: 1285
Structure type: polymer chemical repeating unit
Compound class: O-polysaccharide, O-antigen
Reference(s) to other database(s): GTC:G51061VL, GlycomeDB:
3442
- Compound ID: 1286
Structure type: polymer chemical repeating unit
Compound class: O-polysaccharide, O-antigen
Reference(s) to other database(s): GTC:G04976QE, GlycomeDB:
3443
- Compound ID: 1287
Structure type: polymer chemical repeating unit
Trivial name: b-specific polysaccharide antigen
Compound class: O-polysaccharide, O-antigen, S-layer glycoprotein
Reference(s) to other database(s): GTC:G48878CJ, GlycomeDB:
3444
- Compound ID: 1289
Structure type: polymer chemical repeating unit
Compound class: O-polysaccharide, O-antigen
Reference(s) to other database(s): GTC:G81365ZA, GlycomeDB:
3445
- Compound ID: 1290
Structure type: polymer chemical repeating unit
Compound class: O-polysaccharide, O-antigen
Reference(s) to other database(s): GTC:G35276WU, GlycomeDB:
3446
- Compound ID: 1291
Structure type: polymer chemical repeating unit
Compound class: O-polysaccharide, O-antigen
Reference(s) to other database(s): GTC:G86024VK, GlycomeDB:
3447
- Compound ID: 1295
Structure type: polymer chemical repeating unit
Compound class: O-polysaccharide, O-antigen
Reference(s) to other database(s): GTC:G43495GI, GlycomeDB:
25363
- Compound ID: 1296
|
Arap4N-(1--P--?)--+ LIP-(?-?)-+
| |
b-L-Arap4N-(1-8)-a-Kop-(2-4)-Kdop-(2-?)-D-GlcpN-(1-?)-D-GlcpN-(1--P--1)--Arap4N
|
LIP-(?-?)-+ |
Show graphically |
Structure type: oligomer
Compound class: lipid A
Expand this publication
Collapse this publication
2. (Article ID: 1868)
Knirel YA, Soldatkina MA, Shashkov AS, Tanatar NV, Paramonov NA, Zakharova IY
Antigenic polysaccharides of bacteria. 34. Structure of O-specific polysaccharide chains of lipopolysaccharides from Pseudomonas cepacia strains IMV 4207 (serotype A) and IMV 598/2
Bioorganicheskaya Khimia = Bioorganic Chemistry [Russian] 14(12) (1988)
1678-1683
On the basis of non-destructive analysis by means of 1H and 13C NMR spectroscopy and calculation of specific optical rotation, it was concluded that O-specific polysaccharide of Pseudomonas cepacia strain IMV 4207 (serotype A) has the structure (I): (formula; see text) Two structurally different polysaccharides were found in the ratio of approximately 2.5:1 in P. cepacia strain IMV 598/2 which is serologically related to serotype A in Nakamura classification and serotype 2 in Heidt classification. The minor polysaccharide has the structure (I) whereas the major one possesses the structure (II) which is characteristic of the formerly studied O-specific polysaccharide of P. cepacia strain IMV 4137 belonging to serotype 2: →4)-β-D-Galp-(1→2)-α-L-Rhap-(1→.
NCBI PubMed ID: 2472144Journal NLM ID: 7804941Publisher: Moskva: Nauka
Institutions: N.D. Zelinsky Institute of Organic Chemistry, Academy of Sciences of the USSR, Moscow, Russia
Methods: 13C NMR, 1H NMR
The publication contains the following compound(s):
- Compound ID: 1282
Structure type: polymer chemical repeating unit
Compound class: O-polysaccharide, O-antigen
Reference(s) to other database(s): GTC:G62219GM, GlycomeDB:
3439
- Compound ID: 1293
Structure type: polymer chemical repeating unit
Compound class: O-polysaccharide, O-antigen
Reference(s) to other database(s): GTC:G78814IK, GlycomeDB:
3436
Expand this publication
Collapse this publication
Total list of publication IDs on all result pages of the current query:
Total list of corresponding CSDB IDs (permanent record IDs):
Execution: 1 sec