CSDB: Search results

Found 1 organism. Displayed organism 1
Expand all organisms Show all as text (SweetDB notation)

1. (Organism ID: 418)

Klebsiella pneumoniae

on a lifemap

(NCBI TaxID 573, species name lookup)

Previously named: Bacillus pneumoniae , Hyalococcus pneumoniae , Bacterium pneumoniae crouposae, Klebsiella pneumoniae aerogenes
Taxonomic group: bacteria
Phylum: Proteobacteria

The following compound(s) are assigned to this organism:

Compound ID: 648

Compound 648

Show legend
Show as text

Compound ID: 649

Compound 649

Show legend
Show as text

Compound ID: 650

Compound 650

Show legend
Show as text

Compound ID: 651

Compound 651

Show legend
Show as text

Compound ID: 652

Compound 652

Show legend
Show as text

Compound ID: 653

Compound 653

Show legend
Show as text

Compound ID: 654

Compound 654

Show legend
Show as text

Compound ID: 655

Compound 655

Show legend
Show as text

Compound ID: 362

Show legend
Show as text

Structure type: polymer chemical repeating unit
Trivial name: D-galactan I, galactan I, galactan, D-galactan, microbial carbohydrate determinants, D-galactan-I
Compound class: CPS, EPS, O-polysaccharide, O-antigen, LPS, cell wall polysaccharide
Reference(s) to other database(s): GTC:G85324FU, GlycomeDB:665

Molecular Microbiology 2000, "The 5'-proximal hairpin loop of lbi RNA is a key structural element in repression of D-galactan II biosynthesis in Klebsiella pneumoniae serotype O1"
CSDB ID 5562 (all data & tools)

Chembiochem: a European Journal of Chemical Biology 2009, "Chemistry and biology of galactofuranose-containing polysaccharides"
CSDB ID 23824 (all data & tools)

Journal of Biological Chemistry 2010, "A membrane-located glycosyltransferase complex required for biosynthesis of the D-galactan I lipopolysaccharide O antigen in Klebsiella pneumoniae"
CSDB ID 25313 (all data & tools)

ACS Chemical Biology 2020, "Processivity in Bacterial Glycosyltransferases"
CSDB ID 7679 (all data & tools)
Compound ID: 656

Show legend
Show as text

Structure type: polymer chemical repeating unit
Trivial name: D-galactan II, galactan II, D-galactan-II
Compound class: CPS, EPS, O-polysaccharide, O-antigen
Reference(s) to other database(s): GTC:G16623PZ, GlycomeDB:664

Molecular Microbiology 2000, "The 5'-proximal hairpin loop of lbi RNA is a key structural element in repression of D-galactan II biosynthesis in Klebsiella pneumoniae serotype O1"
CSDB ID 5727 (all data & tools)

Compound ID: 1068

Compound 1068

Show legend
Show as text

Compound ID: 1491

Compound 1491

Show legend
Show as text

Compound ID: 1540

Compound 1540

Show legend
Show as text

Compound ID: 1541

Compound 1541

Show legend
Show as text

Compound ID: 1542

Compound 1542

Show legend
Show as text

Compound ID: 1543

Compound 1543

Show legend
Show as text

Compound ID: 1544

Compound 1544

Show legend
Show as text

Compound ID: 1545

Compound 1545

Show legend
Show as text

Compound ID: 1546

Compound 1546

Show legend
Show as text

Compound ID: 1820

Compound 1820

Show legend
Show as text

Compound ID: 1834

Show legend
Show as text

Structure type: oligomer
Compound class: O-polysaccharide, O-antigen
Reference(s) to other database(s): GTC:G61787ID

European Journal of Biochemistry 1996, "A Klebsiella pneumoniae strain that shares a type-specific antigen with Shigella flexneri serotype 6. Characterization of the strain and structural studies of the O-antigenic polysaccharide"
CSDB ID 119 (all data & tools)

Compound ID: 2371

Compound 2371

Show legend
Show as text

Compound ID: 3467

Show legend
Show as text

Structure type: oligomer
Trivial name: repeating unit of the O-antigenic polysaccharide
Reference(s) to other database(s): GTC:G48874DC, GlycomeDB:26848

Carbohydrate Research 2001, "Synthesis of an L-rhamnose tetrasaccharide, the common and major structure of the repeating unit of the O-antigenic polysaccharide of a strain of Klebsiella pneumoniae and Pseudomonas holci"
CSDB ID 5970 (all data & tools)

Compound ID: 4019

Compound 4019

Show legend
Show as text

Compound ID: 4081

Compound 4081

Show legend
Show as text

Compound ID: 4199

Compound 4199

Show legend
Show as text

Compound ID: 4200

Compound 4200

Show legend
Show as text

Compound ID: 4201

Compound 4201

Show legend
Show as text

Compound ID: 4365

Compound 4365

Show legend
Show as text

Compound ID: 4366

Compound 4366

Show legend
Show as text

Compound ID: 4367

Compound 4367

Show legend
Show as text

Compound ID: 4368

Compound 4368

Show legend
Show as text

Compound ID: 4369

Compound 4369

Show legend
Show as text

Compound ID: 5418

Show legend
Show as text

Structure type: oligomer
Compound class: CPS
Reference(s) to other database(s): GTC:G00429MY

Carbohydrate Research 1993, "Structural studies of the capsular polysaccharide (S-21) from Klebsiella pneumoniae ATCC 31314"
CSDB ID 117294 (all data & tools)
Compound ID: 5803

Show legend
Show as text

Structure type: polymer chemical repeating unit
Compound class: CPS
Reference(s) to other database(s): GTC:G93258EN, GlycomeDB:16375

Infection and Immunity 1993, "Enhancement of extracapsular polysaccharide synthesis in Klebsiella pneumoniae by RmpA2, which shows homology to NtrC and FixJ"
CSDB ID 130479 (all data & tools)

Compound ID: 7578

Compound 7578

Show legend
Show as text

Compound ID: 8463

Show legend
Show as text

Structure type: monomer
Trivial name: UDP-2F-Tal

Organic and Biomolecular Chemistry 2009, "Sugar nucleotide recognition by Klebsiella pneumoniae UDP-D-galactopyranose mutase: fluorinated substrates, kinetics and equilibria"
CSDB ID 23694 (all data & tools)
Compound ID: 7938

Show legend
Show as text

Structure type: monomer
Trivial name: UDP-α-D-galactofuranose, UDP-galactofuranose
Compound class: nucleoside diphosphate sugar

Chembiochem: a European Journal of Chemical Biology 2009, "Chemistry and biology of galactofuranose-containing polysaccharides"
CSDB ID 24199 (all data & tools)

Compound ID: 8813

Compound 8813

Show legend
Show as text

Compound ID: 8814

Compound 8814

Show legend
Show as text

Compound ID: 8816

Compound 8816

Show legend
Show as text

Compound ID: 8831

Compound 8831

Show legend
Show as text

Compound ID: 8841

Show legend
Show as text

Structure type: fragment of a bigger structure
Trivial name: common part of the core oligosaccharide
Compound class: core oligosaccharide

Mass Spectrometry Reviews 2010, "Structural investigation of bacterial lipopolysaccharides by mass spectrometry and tandem mass spectrometry"
CSDB ID 25530 (all data & tools)
Compound ID: 9049

Show legend
Show as text

Structure type: oligomer
Aglycon: (1->P-P) undecaprenylpyrophosphate (Und-P-P)
Trivial name: adapter and primer for galactan I

Journal of Biological Chemistry 2010, "A membrane-located glycosyltransferase complex required for biosynthesis of the D-galactan I lipopolysaccharide O antigen in Klebsiella pneumoniae"
CSDB ID 25726 (all data & tools)
Compound ID: 13377

Show legend
Show as text

Structure type: polymer biological repeating unit ; 3100000
Trivial name: fucogel
Compound class: EPS
Reference(s) to other database(s): GTC:G78788EB

Bioresource Technology 2017, "Engineering aspects of microbial exopolysaccharide production"
CSDB ID 43169 (all data & tools)
Compound ID: 13559

Show legend
Show as text

Structure type: oligomer
Trivial name: galactan-I O-antigen
Compound class: galatan
Reference(s) to other database(s): GTC:G93691ZU

BOOK: Carbohydrates in Drug Design and Discovery(series: RSC Drug Discovery Series); Eds.: Jesús Jiménez-Barbero J, Canada FJ, Martín-Santamaría S; Royal Society of Chemistry 2015, "Galactofuranose biosynthesis: discovery, mechanisms and therapeutic relevance"
CSDB ID 48521 (all data & tools)

Compound ID: 13635

Compound 13635

Show legend
Show as text

Compound ID: 14438

Compound 14438

Show legend
Show as text

Compound ID: 14829

Show legend
Show as text

Structure type: oligomer
Trivial name: biofilm
Compound class: EPS

Current Opinion in Chemical Biology 2020, "Recent progress in chemical synthesis of bacterial surface glycans"
CSDB ID 5127 (all data & tools)

Compound ID: 16438

Compound 16438

Show legend
Show as text

Compound ID: 1003

Compound 1003

Show legend
Show as text

Compound ID: 16622

Compound 16622

Show legend
Show as text

Compound ID: 16623

Compound 16623

Show legend
Show as text

Compound ID: 16624

Compound 16624

Show legend
Show as text

Compound ID: 1030

-6)-b-D-GlcpNAc-(1- Show graphically

Show legend
Show as text

Structure type: homopolymer
Trivial name: poly-β-1,6-GlcNAc (PGA), biofilm, poly-b-(1-6)-N-acetyl-D-glucosamine (PNAG), poly-β-N-acetyl-glucosamine (PNAG), PNAG, poly-N-acetylglucosamine, PNAG
Compound class: CPS, EPS, O-polysaccharide, glucan, polysaccharide
Reference(s) to other database(s): GTC:G36952FI, GlycomeDB:11210

Engineering (Beijing) 2024, "Antibodies targeting a conserved surface polysaccharide are protective against a wide range of microbial pathogens producing β-1–6-linked poly-N-acetylglucosamine (PNAG)"
CSDB ID 15645 (all data & tools)

Expand this organism

Execution: 1 sec