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1.
(
Organism ID:
4401)
Agrobacterium
tumefaciens
Rv3
(
Ancestor NCBI TaxID 358
,
species name lookup
)
Taxonomic group:
bacteria
Phylum:
Proteobacteria
The following compound(s) are assigned to this organism:
Compound ID:
7747
b-D-Galp-(1-8)-a-Kdop-(2-4)-+ | a-D-Manp-(1-6)-+ | P-4)-+ | | | a-D-Manp-(1-2)-a-D-Manp-(1-3)-a-D-Manp-(1-3)-a-D-Manp-(1-5)-a-Kdop-(2-6)-b-D-GlcpN-(1-6)-a-D-GlcpN-(1-P
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Structure type:
oligomer
Compound class:
core oligosaccharide
Reference(s) to other database(s):
GlycomeDB:
36930
Carbohydrate Research
2008, "Lipopolysaccharide structures from Agrobacterium and Rhizobiaceae species"
CSDB ID 22900
(all data & tools)
Compound ID:
8868
b-D-Galp-(1-8)-a-Kdop-(2-4)-+ | a-D-Manp-(1-6)-+ | | | a-D-Manp-(1-2)-a-D-Manp-(1-3)-a-D-Manp-(1-3)-a-D-Manp-(1-5)-a-Kdo
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Structure type:
oligomer
Compound class:
core oligosaccharide
Reference(s) to other database(s):
GTC:G45058ML, GlycomeDB:
37840
BOOK: Endotoxins: Structure, Function and Recognition (series: Subcellular Biochemistry, Part 1); Eds.: Wang X, Quinn PJ; Springer Science+Business Media B.V.
2010, "The Diversity of the Core Oligosaccharide in Lipopolysaccharides"
CSDB ID 31106
(all data & tools)
Compound ID:
11096
b-D-Galp-(1-8)-a-Kdop-(2-4)-+ | a-D-Manp-(1-6)-+ | | | a-D-Manp-(1-2)-a-D-Manp-(1-2)-a-D-Manp-(1-3)-a-D-Manp-(1-5)-a-Kdop-(2--/lipid A/
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Structure type:
oligomer
Aglycon:
lipid A
Compound class:
LPS
Reference(s) to other database(s):
GTC:G36172FX
Chemical Society Reviews
2013, "Multivalent glycoconjugates as anti-pathogenic agents"
CSDB ID 29914
(all data & tools)
Compound ID:
14820
a-Kdop-(2-4)-+ | a-D-Manp-(1-5)-a-Kdop-(2-6)-b-D-GlcpNAc-(1-6)-a-D-GlcpNAc-(1--/(->1)(CH2)3NH2 (3-aminopropyl)/
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Structure type:
oligomer
Aglycon:
(->1)(CH2)3NH2 (3-aminopropyl)
Compound class:
core oligosaccharide
Reference(s) to other database(s):
GTC:G84063DG
Current Opinion in Chemical Biology
2020, "Recent progress in chemical synthesis of bacterial surface glycans"
CSDB ID 5117
(all data & tools)
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