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1.
(
Organism ID:
4454)
Bordetella
bronchiseptica
RB50
(
NCBI TaxID 257310
,
species name lookup
)
Taxonomic group:
bacteria
Phylum:
Proteobacteria
The following compound(s) are assigned to this organism:
Compound ID:
7885
Lac2Me-(1-4)-a-L-GalpNAc3NFo4NA6NH2-(1-4)-{{{-a-L-GalpNAc3NAcA-(1-4)-}}}a-L-GalpNAc3NAcA-(1--/core/
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Structure type:
monomer
Aglycon:
core
Trivial name:
non reducing end-group of O-polysaccharide
Compound class:
O-polysaccharide
Vaccine
2008, "Saccharide/protein conjugate vaccines for Bordetella species: Preparation of saccharide, development of new conjugation procedures, and physico-chemical and immunological characterization of the conjugates"
CSDB ID 23031
(all data & tools)
Compound ID:
8504
-4)-b-L-GalpNAc3NAcA6(17%)NH2-(1-
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Structure type:
homopolymer
Compound class:
O-polysaccharide, O-antigen
Reference(s) to other database(s):
GTC:G65880VY
Journal of Biological Chemistry
2009, "Post-assembly Modification of Bordetella bronchiseptica O Polysaccharide by a Novel Periplasmic Enzyme Encoded by wbmE"
CSDB ID 23738
(all data & tools)
Compound ID:
9704
a-D-GlcpN-(1-7)-+ | a-D-GlcpA-(1-2)-L-gro-a-D-manHepp-(1-3)-+ | | P-4)-+ | | a-D-GalpNA-(1-6)-+ | | | L-gro-a-D-manHepp-(1-4)-+ | | P-4)-+ | | | | a-D-GlcpNAc-(1-4)-b-D-ManpNAc3NAcA-(1-3)-a-D-FucpNAc4N(50%)Me-(1-6)-a-D-GlcpN-(1-4)-b-D-Glcp-(1-4)-L-gro-a-D-manHepp-(1-5)-a-Kdop-(2--/lipid A/
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Structure type:
oligomer
Aglycon:
lipid A
Compound class:
core oligosaccharide with O-unit
Reference(s) to other database(s):
GTC:G24502SK
Proceedings of the National Academy of Sciences of the USA
2011, "Oligosaccharide conjugates of Bordetella pertussis and bronchiseptica induce bactericidal antibodies, an addition to pertussis vaccine"
CSDB ID 26258
(all data & tools)
Compound ID:
9725
Myr-(1-3)-3HOMyr-(1-2)-+ 3HOMyr-(1-2)-+ | | ?%Pam-(1-3)-3HOMyr-(1-3)-b-D-GlcpN-(1-6)-a-D-GlcpN-(1-P | | P-4)-+ 3HOLau-(1-3)-+
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Structure type:
oligomer
Compound class:
lipid A
Journal of Bacteriology
2011, "Role of pagL and lpxO in Bordetella bronchiseptica lipid A biosynthesis"
CSDB ID 31949
(all data & tools)
Journal of Medicinal Chemistry
2021, "Chemical Highlights Supporting the Role of Lipid A in Efficient Biological Adaptation of Gram-Negative Bacteria to External Stresses"
CSDB ID 9796
(all data & tools)
Compound ID:
9726
2HOLau-(1-3)-3HOMyr-(1-2)-+ | ?%b-L-Arap4N-(1--P--4)--+ | | | ?%Pam-(1-3)-3HOMyr-(1-3)-b-D-GlcpN-(1-6)-a-D-GlcpN-(1-P | Myr-(1-3)-3HOMyr-(1-2)-+
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Structure type:
oligomer
Compound class:
lipid A
Journal of Bacteriology
2011, "Role of pagL and lpxO in Bordetella bronchiseptica lipid A biosynthesis"
CSDB ID 31950
(all data & tools)
Compound ID:
1030
-6)-b-D-GlcpNAc-(1-
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Structure type:
homopolymer
Trivial name:
poly-β-1,6-GlcNAc (PGA), biofilm, poly-b-(1-6)-N-acetyl-D-glucosamine (PNAG), poly-β-N-acetyl-glucosamine (PNAG), PNAG, poly-N-acetylglucosamine, PNAG
Compound class:
CPS, EPS, O-polysaccharide, glucan, polysaccharide
Reference(s) to other database(s):
GTC:G36952FI, GlycomeDB:
11210
Journal of Bacteriology
2012, "BpsR Modulates Bordetella Biofilm Formation by Negatively Regulating the Expression of the Bps Polysaccharide"
CSDB ID 27136
(all data & tools)
Compound ID:
581
-4)-a-L-GalpNAc3NAcA-(1-
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Structure type:
homopolymer
Compound class:
O-polysaccharide, O-antigen
Reference(s) to other database(s):
GTC:G17747AL, GlycomeDB:
26665
Carbohydrate Research
2012, "Synthesis of lipopolysaccharide O-antigens by ABC transporter-dependent pathways"
CSDB ID 28356
(all data & tools)
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