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1. (Article ID: 4475)
Albitar-Nehme S, Basheer SM, Njamkepo E, Brisson JR, Guiso N, Caroff M
Comparison of lipopolysaccharide structures of Bordetella pertussis clinical isolates from pre- and post-vaccine era
Carbohydrate Research 378 (2013)
56-62
Endotoxins are lipopolysaccharides (LPS), and major constituents of the outer membrane of Gram-negative bacteria. Bordetella pertussis LPS were the only major antigens, of this agent of whooping-cough, that were not yet analyzed on isolates from the pre- and post-vaccination era. We compared here the LPS structures of four clinical isolates with that of the vaccine strain BP 1414. All physico-chemical analyses, including SDS-PAGE, TLC, and different MALDI mass spectrometry approaches were convergent. They helped demonstrating that, on the contrary to some other B. pertussis major antigens, no modification occurred in the dodecasaccharide core structure, as well as in the whole LPS molecules. These results are rendering these major antigens good potential vaccine components. Molecular modeling of this conserved LPS structure also confirmed the conclusions of previous experiments leading to the production of anti-LPS monoclonal antibodies and defining the main epitopes of these major antigens.
lipopolysaccharides, structure, Bordetella pertussis, vaccine, evolution, clinical isolates
NCBI PubMed ID: 23731797Publication DOI: 10.1016/j.carres.2013.05.002Journal NLM ID: 0043535Publisher: Elsevier
Correspondence: M. Caroff
u-psud.fr>
Institutions: Endotoxines, Structures et Activites (ESA), Universite de Paris-Sud, UMR 8621 CNRS, Institut de Genetique et Microbiologie, F-Orsay, France
Methods: SDS-PAGE, TLC, MALDI-MS, MALDI-TOF MS
The publication contains the following compound(s):
- Compound ID: 162
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3HOMyr-(1-3)-+ 3HOMyr-(1-2)-+
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Myr-(1-3)-3HOMyr-(1-2)-b-D-GlcpN-(1-6)-a-D-GlcpN-(1-P
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P-4)-+ 3HODco-(1-3)-+ |
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Structure type: oligomer
Compound class: lipid A
- Compound ID: 3920
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EtN-(1--P--0)--?%P-4)-+
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a-D-GlcpN-(1-7)-+ |
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a-D-GlcpA-(1-2)-L-gro-a-D-manHepp-(1-3)-+ |
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a-D-GalpNA-(1-6)-+ | |
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L-gro-a-D-manHepp-(1-4)-+ | | |
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a-D-GlcpNAc-(1-4)-b-D-ManpNAc3NAcA-(1-3)-b-L-FucpNAc4NMe-(1-6)-a-D-GlcpN-(1-4)-b-D-Glcp-(1-4)-L-gro-a-D-manHepp-(1-5)-a-Kdop-(2--/lipid A/ |
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Structure type: oligomer
Aglycon: lipid A
Compound class: core oligosaccharide, LPS
Reference(s) to other database(s): GTC:G45716UO
- Compound ID: 11079
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P-4)-+ 3HOMyr-(1-2)-+
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Myr-(1-3)-3HOMyr-(1-2)-b-D-GlcpN-(1-6)-a-D-GlcpN-(1-P
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3HODco-(1-3)-+ |
Show graphically |
Structure type: oligomer
Compound class: lipid A
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2. (Article ID: 5116)
Bouchez V, Albitar-Nehme S, Novikov A, Guiso N, Caroff M
Bordetella holmesii: Lipid A Structures and Corresponding Genomic Sequences Comparison in Three Clinical Isolates and the Reference Strain ATCC 51541
International Journal of Molecular Sciences 18(5) (2017)
E1080
Bordetella holmesii can cause invasive infections but can also be isolated from the respiratory tract of patients with whooping-cough like symptoms. For the first time, we describe the lipid A structure of B. holmesii reference strain ATCC 51541 (alias NCTC12912 or CIP104394) and those of three French B. holmesii clinical isolates originating from blood (Bho1) or from respiratory samples (FR4020 and FR4101). They were investigated using chemical analyses, gas chromatography-mass spectrometry (GC-MS), and matrix-assisted laser desorption ionization-mass spectrometry (MALDI-MS). The analyses revealed a common bisphosphorylated β-(1→6)-linked d-glucosamine disaccharide with hydroxytetradecanoic acid in amide linkages. Similar to B. avium, B. hinzii and B. trematum lipids A, the hydroxytetradecanoic acid at the C-2' position are carrying in secondary linkage a 2-hydroxytetradecanoic acid residue resulting of post-traductional biosynthesis modifications. The three clinical isolates displayed characteristic structural traits compared to the ATCC 51541 reference strain: the lipid A phosphate groups are more or less modified with glucosamine in the isolates and reference strain, but the presence of 10:0(3-OH) is only observed in the isolates. This trait was only described in B. pertussis and B. parapertussis strains, as well as in B. petrii isolates by the past. The genetic bases for most of the key structural elements of lipid A were analyzed and supported the structural data.
structure, lipid A, endotoxin, mass spectrometry, genomic, Bordetella holmesii, Bordetellae
NCBI PubMed ID: 28524084Publication DOI: 10.3390/ijms18051080Journal NLM ID: 101092791Publisher: Basel, Switzerland: MDPI
Correspondence: martine.caroff

u-psud.fr
Institutions: Institut Pasteur, Unité de Prévention et Thérapies Moléculaires des Maladies Humaines, 25 rue du Dr Roux, 75724 Paris, France, Institute for integrative Biology of the Cell (I2BC), Commissariat à l'Energie Atomique (CEA), Centre National de la Recherche Scientifique (CNRS), Université Paris-Sud, Université Paris-Saclay, Orsay, France, LPS-BioSciences, I2BC, Bâtiment 409, Université de Paris-Sud, Orsay, France
Methods: methylation, PCR, DNA sequencing, GC-MS, de-O-acylation, TLC, acid hydrolysis, MALDI-MS, composition analysis, extraction, bioinformatic analysis
The publication contains the following compound(s):
- Compound ID: 12852
|
2HOLau-(1-3)-3HOMyr-(1-2)-+
|
3HOMyr-(1-3)-+ |
| |
Myr-(1-3)-3HOMyr-(1-2)-b-D-GlcpN-(1-6)-a-D-GlcpN-(1-P
|
P-4)-+ |
Show graphically |
Structure type: oligomer
; 1587.04 [M-H]-
Compound class: lipid A
- Compound ID: 12853
|
Pam-(1-3)-3HOMyr-(1-2)-+
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Pam-(1-3)-3HODco-(1-3)-+ |
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Myr-(1-3)-3HOMyr-(1-2)-b-D-GlcpN-(1-6)-a-D-GlcpN-(1-P
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P-4)-+ |
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Structure type: oligomer
; 1809.45 [M-H]-
Compound class: lipid A
- Compound ID: 12851
|
3HOMyr-(1-3)-+ 3HOMyr-(1-2)-+
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Myr-(1-3)-3HOMyr-(1-2)-b-D-GlcpN-(1-6)-a-D-GlcpN-(1-P
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P-4)-+ 3HODco-(1-3)-+ |
Show graphically |
Structure type: oligomer
; 1558.96 [M-H]-
Compound class: lipid A
- Compound ID: 12847
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2HOLau-(1-3)-3HOMyr-(1-2)-+
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3HOMyr-(1-3)-+ |
| |
2HOMyr-(1-3)-3HOMyr-(1-2)-b-D-GlcpN-(1-6)-a-D-GlcpN-(1-P
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P-4)-+ 3HODco-(1-3)-+ |
Show graphically |
Structure type: oligomer
; 1773.25 [M-H]-
Compound class: lipid A
- Compound ID: 12848
|
2HOLau-(1-3)-3HOMyr-(1-2)-+
|
3HOMyr-(1-3)-+ |
| |
2HOMyr-(1-3)-3HOMyr-(1-2)-b-D-GlcpN-(1-6)-a-D-GlcpN-(1-P
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P-4)-+ |
Show graphically |
Structure type: oligomer
; 1603.0 [M-H]-
Compound class: lipid A
- Compound ID: 12849
|
2HOLau-(1-3)-3HOMyr-(1-2)-+
|
3HODco-(1-3)-+ |
| |
2HOMyr-(1-3)-3HOMyr-(1-2)-b-D-GlcpN-(1-6)-a-D-GlcpN-(1-P
| |
P-4)-+ 3HODco-(1-3)-+ |
Show graphically |
Structure type: oligomer
; 1717.14 [M-H]-
Compound class: lipid A
- Compound ID: 12850
|
2HOLau-(1-3)-3HOMyr-(1-2)-+
|
3HODco-(1-3)-+ |
| |
2HOMyr-(1-3)-3HOMyr-(1-2)-b-D-GlcpN-(1-6)-a-D-GlcpN-(1-P
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P-4)-+ |
Show graphically |
Structure type: oligomer
; 1546.90 [M-H]-
Compound class: lipid A
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