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1.
(
Organism ID:
448)
Escherichia
coli
O55
(
NCBI TaxID 2170726
,
species name lookup
)
Taxonomic group:
bacteria
Phylum:
Proteobacteria
The following compound(s) are assigned to this organism:
Compound ID:
801
a-Colp-(1-2)-b-D-Galp-(1-3)-+ | -6)-b-D-GlcpNAc-(1-3)-a-D-Galp-(1-3)-b-D-GalpNAc-(1-
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Structure type:
suggested polymer biological repeating unit
Compound class:
O-polysaccharide, O-antigen
Reference(s) to other database(s):
GTC:G20452PD, GlycomeDB:
28111
, CCSD:
12259
, CBank-STR:15047
Journal of Bacteriology
2002, "The O-antigen gene cluster of Escherichia coli O55:H7 and identification of a new UDP-GlcNAc C4 epimerase gene"
CSDB ID 5554
(all data & tools)
Journal of Biological Chemistry
1999, "A newly identified horseshoe crab lectin with specificity for blood group A antigen recognizes specific O-antigens of bacterial lipopolysaccharides"
CSDB ID 7239
(all data & tools)
Biochemistry (Moscow)
1994, "The structure of lipopolysaccharides of gram-negative bacteria. III. The structure of O-antigens: A review"
CSDB ID 108629
(all data & tools)
FEMS Microbiology Reviews
2006, "The structures of Escherichia coli O-polysaccharide antigens"
CSDB ID 20658
(all data & tools)
ACS Infectious Diseases
2019, "Direct Cloning of Bacterial Surface Polysaccharide Gene Cluster for One-step Production of Glycoconjugate Vaccine"
CSDB ID 12676
(all data & tools)
FEMS Microbiology Reviews
2020, "Structure and genetics of Escherichia coli O antigens"
CSDB ID 1562
(all data & tools)
Compound ID:
1559
a-Col-(1-2)-b-D-Galp-(1-3)-+ | -3)-a-D-Galp-(1-3)-b-D-GalpNAc-(1-6)-b-D-GlcpNAc-(1-
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Structure type:
polymer chemical repeating unit
Compound class:
O-polysaccharide
Reference(s) to other database(s):
GTC:G77198JQ
Journal of Bacteriology
2004, "Relationships of the Escherichia coli O157, O111, and O55 O-antigen gene clusters with those of Salmonella enterica and Citrobacter freundii, which express identical O antigens"
CSDB ID 9058
(all data & tools)
Compound ID:
11545
b-D-Galp-(1-3)-D-GlcpNAc
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Structure type:
fragment of a bigger structure
Trivial name:
type 1 chain
Reference(s) to other database(s):
GTC:G04616ST
Frontiers in Immunology
2014, "Crossroads between Bacterial and Mammalian Glycosyltransferases"
CSDB ID 30210
(all data & tools)
Compound ID:
11690
a-Colp-(1-2)-b-D-Galp-(1-3)-+ | -6)-b-D-GlcpNAc-(1-3)-a-D-Galp-(1-3)-b-D-GalpNAc-(1-
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Structure type:
polymer biological repeating unit
Compound class:
O-polysaccharide, O-antigen
Reference(s) to other database(s):
GTC:G20452PD
FEMS Microbiology Reviews
2014, "Structural diversity in Salmonella O antigens and its genetic basis"
CSDB ID 30374
(all data & tools)
Compound ID:
8730
a-Colp-(1-2)-b-D-Galp-(1-3)-+ | -6)-b-D-GlcpNAc-(1-3)-a-D-Galp-(1-3)-b-D-GalpNAc-(1-
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Structure type:
polymer chemical repeating unit
Compound class:
O-polysaccharide, O-antigen
Reference(s) to other database(s):
GTC:G20452PD, GlycomeDB:
28111
Russian Journal of Bioorganic Chemistry
2019, "O-Specific polysaccharides of a new species of enteric bacteria Escherichia albertii closely related to E. coli"
CSDB ID 2218
(all data & tools)
Carbohydrate Research
2019, "Colitose-containing O-polysaccharide structure and O-antigen gene cluster of Escherichia albertii HK18069 related to those of Escherichia coli O55 and E.coli O128"
CSDB ID 2369
(all data & tools)
Compound ID:
12342
a-Col-(1-2)-b-D-Galp-(1-3)-+ | -6)-b-D-GlcpNAc-(1-3)-a-D-Galp-(1-3)-b-D-GalpNAc-(1-
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Structure type:
suggested polymer biological repeating unit
Compound class:
O-polysaccharide
Reference(s) to other database(s):
GTC:G96674TM
International Journal of Biological Macromolecules
2020, "Structural and genetic characterization of the colitose-containing O-specific polysaccharide from the lipopolysaccharide of Herbaspirillum frisingense GSF30(T)"
CSDB ID 7625
(all data & tools)
Compound ID:
16551
a-Colp-(1-2)-b-D-Galp-(1-3)-+ | -6)-b-D-GlcpNAc-(1-3)-a-D-Galp-(1-3)-b-D-GalpNAc-(1-
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Structure type:
polymer chemical repeating unit
Aglycon:
core-lipid A
Compound class:
O-polysaccharide, O-antigen
Microorganisms
2023, "O-Polysaccharides of LPS Modulate E. coli Uptake by Acanthamoeba castellanii"
CSDB ID 25957
(all data & tools)
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