Found 4 records.
Displayed records from 1 to 4
Expand all records
Collapse all records
Show all as text (SweetDB notation)
Show all graphically (SNFG notation)
Song G, Du Q
Isolation of a polysaccharide with anticancer activity from Auricularia polytricha using high-speed countercurrent chromatography with an aqueous two-phase system
Journal of Chromatography A 1217(38) (2010)
5930-5934
b-D-Glcp-(1-6)-+
|
-3)-b-D-Glcp-(1-3)-b-D-Glcp-(1-3)-b-D-Glcp-(1- |
Show graphically |
Auricularia polytricha
(NCBI TaxID 29893,
species name lookup)
Taxonomic group: fungi / Basidiomycota
(Phylum: Basidiomycota)
Organ / tissue: fruiting body
The structure was elucidated in this paperNCBI PubMed ID: 20719324Publication DOI: 10.1016/j.chroma.2010.07.036Journal NLM ID: 9318488Publisher: Amsterdam; New York: Elsevier
Correspondence: Du Q <qizhendu

126.com>; Du Q <qizhendu

163.com>
Institutions: Institute of Food and Biological Engineering, Hangzhou University of Commerce, Hangzhou, China
Polysaccharides from a crude extract of Auricularia polytricha were separated by high-speed countercurrent chromatography (HSCCC). The separation was performed with an aqueous two-phase system of PEG1000–K2HPO4–KH2PO4–H2O (0.5:1.25:1.25:7.0, w/w). The crude sample (2.0 g) was successfully separated into three polysaccharide components of AAPS-1 (192 mg), AAPS-2 (137 mg), and AAPS-3 (98 mg) with molecular weights of 162, 259, and 483 kDa, respectively. These compounds were tested for growth inhibition of transplanted S180 sarcoma in mice. AAPS-2 had an inhibition rate of 40.4%. The structure of AAPS-2 was elucidated from partial hydrolysis, periodate oxidation, acetylation, methylation analysis, and NMR spectroscopy (1H, 13C). These results showed AAPS-2 is a polysaccharide with a backbone of (1→3)-linked-β-D-glucopyranosyl and (1→3,6)-linked-β-D-glucopyranosyl residues in a 2:1 ratio, and has one terminal (1→)-β-D-glucopyranosyl at the O-6 position of (1→3,6)-linked-β-D-glucopyranosyl of the main chain.
polysaccharide, structure elucidation, separation, Auricularia polytricha, high-speed countercurrent chromatography
Structure type: structural motif or average structure ; 259000
Location inside paper: Fig.3, AAPS-2, table 3
Compound class: O-polysaccharide, glucan, polysaccharide
Contained glycoepitopes: IEDB_1397514,IEDB_141806,IEDB_142488,IEDB_146664,IEDB_153543,IEDB_158555,IEDB_161166,IEDB_241101,IEDB_558869,IEDB_857743,IEDB_983931,SB_192
Methods: 13C NMR, 1H NMR, IR, GC-MS, TLC, acid hydrolysis, GC, Smith degradation, FTIR, HPLC, HPSEC, enzymatic digestion, extraction, periodate oxidation, acetylation, reduction, precipitation, antitumor activity assay, Sevag method, centrifugation, HSCCC
Biological activity: AAPS-2 showed inhibitory effect against S180 sarcoma in mice (40.43%)
Comments, role: published chemical repeating unit frame was shifted for compatibility with other CSDB records
Related record ID(s): 45827, 45828, 49962
NCBI Taxonomy refs (TaxIDs): 29893Reference(s) to other database(s): GTC:G66305IS
Show glycosyltransferases
1H NMR data: present in publication
|
13C NMR data: present in publication
|
There is only one chemically distinct structure:
Expand this record
Collapse this record
Noreen Y, El-Seedi H, Perera P, Bohlin L
Two new isoflavones from Ceiba pentandra and their effect on cyclooxygenase-catalyzed prostaglandin biosynthesis
Journal of Natural Products 61(1) (1998)
8-12
b-D-Glcp-(1-3')-Subst
Subst = vavain = SMILES COc3c{5}c(O)c2c(=O)c(c1c{53}c(O)c(OC)c(OC)c1)coc2c3 |
Show graphically |
Ceiba pentandra
(NCBI TaxID 193163,
species name lookup)
Taxonomic group: plant / Streptophyta
(Phylum: Streptophyta)
Organ / tissue: bark
The structure was elucidated in this paperNCBI PubMed ID: 9461647Publication DOI: 10.1021/np970198+Journal NLM ID: 7906882Publisher: American Society of Pharmacognosy
Correspondence: Bohlin L <lars.bohlin

pharmacog.uu.se>
Institutions: Division of Pharmacognosy, Department of Pharmacy, Biomedical Centre, Uppsala University, Uppsala, Sweden
The new isoflavone glucoside vavain 3'-O-β-D-glucoside (1) and its aglycon, vavain (2), were isolated from the bark of Ceiba pentandra, together with the known flavan-3-ol, (+)-catechin. These novel structures were elucidated by one- and two-dimensional NMR experiments and by MS, IR, and UV spectroscopy as 5-hydroxy-7,4',5'-trimethoxyisoflavone 3'-O-β-D-glucoside (1) and 5,3'-dihydroxy-7,4',5'-trimethoxyisoflavone (2), respectively. The compounds were isolated following bioactivity-directed fractionation, using a cyclooxygenase-1-catalyzed prostaglandin biosynthesis assay in vitro, in which compounds 1 and 2 and (+)-catechin exhibited IC50 values of 381, 97, and 80 μM, respectively (standard: indomethacin, IC50 1.1 μM). When further tested for their inhibitory effects on cyclooxygenase-2-catalyzed prostaglandin biosynthesis, 1 and 2 were found to be inactive (IC50 > 1200 and > 900 μM, respectively).
Ceiba pentandra, catechin, cyclooxygenase 1, cyclooxygenase 2, flavanol derivative, indometacin, isoflavone derivative, plant extract
Structure type: monomer ; 507 [M+H]+
C
24H
26O
12Location inside paper: p. 8, Scheme, compound 1, table 1, table 2
Compound class: glycoside
Contained glycoepitopes: IEDB_142488,IEDB_146664,IEDB_983931,SB_192
Methods: 13C NMR, 1H NMR, IR, FAB-MS, inhibition studies, TLC, acid hydrolysis, UV, extraction, optical rotation measurement, HMBC, DEPT, COSY, MPLC, HSCCC
Biological activity: essentially inactive in inhibition of COX-2-catalyzed protaglandin biosynthesis; inhibitory activity on COX-1-catalyzed prostaglandin biosynthesis assay in vitro: IC50 97 μM
NCBI Taxonomy refs (TaxIDs): 193163
Show glycosyltransferases
NMR conditions: in AcCN-d3 at 333 K
[as TSV]
13C NMR data:
Linkage Residue C1 C2 C3 C4 C5 C6 C7 C8 C9 C10 C11 C12 C13 C14 C15 C16 C17 C18
3' bDGlcp 103.15 75.22 78.19 71.98 78.31 63.31
Subst 155.88 124.45 182.16 164.06 99.67 167.47 93.89 159.52 107.50 127.91 113.10 152.02 141.19 154.94 110.21 57.58 61.89 57.27
1H NMR data:
Linkage Residue H1 H2 H3 H4 H5 H6 H7 H8 H9 H10 H11 H12 H13 H14 H15 H16 H17 H18
3' bDGlcp 4.94 3.36-3.55 3.36-3.55 3.36-3.55 3.36-3.55 3.66-3.81
Subst 8.12 - - - 6.40 - 6.54 - - - 7.07 - - - 6.9 3.90 3.86 3.88
1H/13C HSQC data:
Linkage Residue C1/H1 C2/H2 C3/H3 C4/H4 C5/H5 C6/H6 C7/H7 C8/H8 C9/H9 C10/H10 C11/H11 C12/H12 C13/H13 C14/H14 C15/H15 C16/H16 C17/H17 C18/H18
3' bDGlcp 103.15/4.94 75.22/3.36-3.55 78.19/3.36-3.55 71.98/3.36-3.55 78.31/3.36-3.55 63.31/3.66-3.81
Subst 155.88/8.12 99.67/6.40 93.89/6.54 113.10/7.07 110.21/6.9 57.58/3.90 61.89/3.86 57.27/3.88
1H NMR data:
Linkage | Residue | H1 | H2 | H3 | H4 | H5 | H6 | H7 | H8 | H9 | H10 | H11 | H12 | H13 | H14 | H15 | H16 | H17 | H18 |
3' | bDGlcp | 4.94 | 3.36 3.55 | 3.36 3.55 | 3.36 3.55 | 3.36 3.55 | 3.66 3.81 | |
| Subst | 8.12 |
|
|
| 6.40 |
| 6.54 |
|
|
| 7.07 |
|
|
| 6.9 | 3.90 | 3.86 | 3.88 |
|
13C NMR data:
Linkage | Residue | C1 | C2 | C3 | C4 | C5 | C6 | C7 | C8 | C9 | C10 | C11 | C12 | C13 | C14 | C15 | C16 | C17 | C18 |
3' | bDGlcp | 103.15 | 75.22 | 78.19 | 71.98 | 78.31 | 63.31 | |
| Subst | 155.88 | 124.45 | 182.16 | 164.06 | 99.67 | 167.47 | 93.89 | 159.52 | 107.50 | 127.91 | 113.10 | 152.02 | 141.19 | 154.94 | 110.21 | 57.58 | 61.89 | 57.27 |
|
There is only one chemically distinct structure:
Expand this record
Collapse this record
Degenhardt A, Engelhardt UH, Lakenbrink C, Winterhalter P
Preparative separation of polyphenols from tea by high-speed countercurrent chromatography
Journal of Agricultural and Food Chemistry 48(8) (2000)
3425-3430
Camellia sinensis
(NCBI TaxID 4442,
species name lookup)
Taxonomic group: plant / Streptophyta
(Phylum: Streptophyta)
Organ / tissue: leaf
NCBI PubMed ID: 10956128Publication DOI: 10.1021/jf0000833Journal NLM ID: 0374755Publisher: American Chemical Society
Institutions: Institut für Lebensmittelchemie, Technische Universität Braunschweig, Braunschweig, Germany
High-speed countercurrent chromatography (HSCCC) was applied to the separation of polyphenols from tea leaves (Camellia sinensis L.). The capability of HSCCC to isolate pure tea polyphenols from complex mixtures on a preparative scale was demonstrated for catechins, flavonol glycosides, proanthocyanidins, and strictinin from green and black tea. The purity and identity of isolated compounds was confirmed by (1)H NMR and HPLC-ESI-MS/MS. Gram quantities of polyphenols from tea can be isolated with the procedure described.
high-speed countercurrent chromatography, flavonol glycosides, Camellia sinensis, polyphenols, catechins, green tea, black tea, HPLC-ESI-MS, proanthocyanidins, strictinin
Structure type: oligomer
C
27H
30O
15
Trivial name: nicotiflorin
Compound class: glycoside, flavonoid glycoside, flavonol glycoside
Contained glycoepitopes: IEDB_136105,IEDB_142488,IEDB_144144,IEDB_146664,IEDB_225177,IEDB_885823,IEDB_983931,SB_192
Methods: 1H NMR, ESI-MS/MS, extraction, HSCCC, HPLC-ESI-MS/MS
Related record ID(s): 65270
NCBI Taxonomy refs (TaxIDs): 4442Reference(s) to other database(s): CCSD:
41325, CBank-STR:3415
Show glycosyltransferases
There is only one chemically distinct structure:
Expand this record
Collapse this record
Degenhardt A, Engelhardt UH, Lakenbrink C, Winterhalter P
Preparative separation of polyphenols from tea by high-speed countercurrent chromatography
Journal of Agricultural and Food Chemistry 48(8) (2000)
3425-3430
Camellia sinensis
(NCBI TaxID 4442,
species name lookup)
Taxonomic group: plant / Streptophyta
(Phylum: Streptophyta)
Organ / tissue: leaf
NCBI PubMed ID: 10956128Publication DOI: 10.1021/jf0000833Journal NLM ID: 0374755Publisher: American Chemical Society
Institutions: Institut für Lebensmittelchemie, Technische Universität Braunschweig, Braunschweig, Germany
High-speed countercurrent chromatography (HSCCC) was applied to the separation of polyphenols from tea leaves (Camellia sinensis L.). The capability of HSCCC to isolate pure tea polyphenols from complex mixtures on a preparative scale was demonstrated for catechins, flavonol glycosides, proanthocyanidins, and strictinin from green and black tea. The purity and identity of isolated compounds was confirmed by (1)H NMR and HPLC-ESI-MS/MS. Gram quantities of polyphenols from tea can be isolated with the procedure described.
high-speed countercurrent chromatography, flavonol glycosides, Camellia sinensis, polyphenols, catechins, green tea, black tea, HPLC-ESI-MS, proanthocyanidins, strictinin
Structure type: oligomer
C
27H
30O
16
Trivial name: rutin, rutoside, rutin, quercetin rutinoside, rutoside, quercetin 3-O-rutinose, quercetin-3-O-rutinoside, quercetin 3-O-rutinoside
Compound class: saponin glycoside, glycoside, flavonoid glycoside, flavonol glycoside, flavone glycoside
Contained glycoepitopes: IEDB_136105,IEDB_142488,IEDB_144144,IEDB_146664,IEDB_225177,IEDB_885823,IEDB_983931,SB_192
Methods: 1H NMR, ESI-MS/MS, extraction, HSCCC, HPLC-ESI-MS/MS
Related record ID(s): 65269
NCBI Taxonomy refs (TaxIDs): 4442Reference(s) to other database(s): CCSD:
50720, CBank-STR:3399
Show glycosyltransferases
There is only one chemically distinct structure:
Expand this record
Collapse this record
Total list of record IDs on all result pages of the current query:
Execution: 9 sec