Taxonomic group: bacteria / Chlorobi
(Phylum: Chlorobi)
The structure was elucidated in this paperNCBI PubMed ID: 9468332Publication DOI: 10.1016/s0304-4165(97)00081-0Journal NLM ID: 0217513Publisher: Elsevier
Institutions: Laboratory of Biophysics, Department of Microbiology, College of Natural Sciences, and Research Center for Molecular Microbiology, Seoul National University, Seoul, South Korea
A novel pterin compound, designated as tepidopterin, was detected from a thermophilic photosynthetic green sulphur bacterium, Chlorobium tepidum. The amount of tepidopterin inside the cell was estimated to be 2-5 μmol/g dry weight of cell. This compound was purified through a high performance liquid chromatography using preparative ∆Pak C18 column. This compound was characterized by chromatographic behavior and by absorption and fluorescence properties. Its structure was determined to be 1-O-(L-threo-biopterin-2'-yl)-β-N-acetylglucosamine by 1D- and 2D-NMR spectroscopy, mass spectrometry and CD. The relative amount of tetrahydrotepidopterin was estimated to be 96.7% inside the cell, that of dihydrotepidopterin 2.9%, and that of fully oxidized tepidopterin 0.4%. The amount of tepidopterin within the cell increased continuously until the beginning of the stationary phase of the cell growth.
N-acetylglucosamine, tepidopterin, L-threo-biopterin, Chlorobium tepidum
Structure type: monomer ; 441 [M+H]+
Location inside paper: Fig. 7, a, Fig. 3
Trivial name: tepidopterin
Compound class: glycoside
Contained glycoepitopes: IEDB_135813,IEDB_137340,IEDB_141807,IEDB_151531
Methods: 13C NMR, 1H NMR, ESI-MS, acid hydrolysis, HPLC, UV, enzymatic digestion, extraction, periodate oxidation, CD, cell growth, evaporation, iodine oxidation, acidic oxidation, alkaline oxidation, thermospray MS, COSY
NCBI Taxonomy refs (TaxIDs): 1097
Show glycosyltransferases
NMR conditions: in DMSO-d6 at 301(C) K
[as TSV]
13C NMR data: present in publication
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There is only one chemically distinct structure: