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1. (Article ID: 4617)
Sigida EN, Fedonenko YP, Shashkov AS, Zdorovenko EL, Konnova SA, Ignatov VV, Knirel YA
Structural studies of the O-specific polysaccharide(s) from the lipopolysaccharide of Azospirillum brasilense type strain Sp7
Carbohydrate Research 380 (2013)
76-80
Lipopolysaccharide was obtained by phenol-water extraction from dried bacterial cells of Azospirillum brasilense type strain Sp7. Mild acid hydrolysis of the lipopolysaccharide followed by GPC on Sephadex G-50 resulted in a polysaccharide mixture, which was studied by composition and methylation analyses, Smith degradation and (1)H and (13)C NMR spectroscopy. The following polysaccharide structures were established, where italics indicate a non-stoichiometric (~40%) 2-O-methylation of l-rhamnose.
Lipopolysaccharide, Azospirillum brasilense, bacterial polysaccharide structure
NCBI PubMed ID: 23978662Publication DOI: 10.1016/j.carres.2013.07.013Journal NLM ID: 0043535Publisher: Elsevier
Correspondence: EA: E.L. Zdorovenko
mail.ru>; evelina
ioc.ac.ru
Institutions: Zelinsky Institute of Organic Chemistry, Russian Academy of Sciences, Moscow, Russia, Institute of Biochemistry and Physiology of Plants and Microorganisms, Russian Academy of Sciences, 13 Prospekt Entuziastov, Saratov 410049, Russia
Methods: 13C NMR, 1H NMR, methylation, GLC-MS, NMR-2D, GLC, mild acid hydrolysis, Smith degradation, composition analysis, GPC
The publication contains the following compound(s):
- Compound ID: 10315
Structure type: polymer chemical repeating unit
Trivial name: flagellin glycan
Compound class: O-polysaccharide, O-glycan
Reference(s) to other database(s): GTC:G48495WL
- Compound ID: 10320
Structure type: polymer chemical repeating unit
Compound class: O-polysaccharide, O-antigen
Reference(s) to other database(s): GTC:G87184OR
- Compound ID: 11441
Structure type: polymer chemical repeating unit
Compound class: O-polysaccharide
Reference(s) to other database(s): GTC:G80904SZ
- Compound ID: 11442
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a-L-Fucp-(1-4)-+
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-3)-a-L-Rhap-(1-3)-b-D-Galp-(1-3)-b-D-GlcpNAc-(1- |
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Structure type: polymer chemical repeating unit
Compound class: O-polysaccharide, O-antigen
Reference(s) to other database(s): GTC:G19437BQ
- Compound ID: 11443
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a-L-Fucp-(1-4)-+
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-3)-a-L-Rhap2(40%)Me-(1-3)-b-D-Galp-(1-3)-b-D-GlcpNAc-(1- |
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Structure type: polymer chemical repeating unit
Compound class: O-polysaccharide
Reference(s) to other database(s): GTC:G92415PZ
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