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1. (Article ID: 471)
Novotny R, Pfoestl A, Messner P, Schäffer C
Genetic organization of chromosomal S-layer glycan biosynthesis loci of Bacillaceae
Glycoconjugate Journal 20(7-8) (2004)
435-447
S-layer glycoproteins are cell surface glycoconjugates that have been identified in archaea and in bacteria. Usually, S-layer glycoproteins assemble into regular, crystalline arrays covering the entire bacterium. Our research focuses on thermophilic Bacillaceae, which are considered a suitable model system for studying bacterial glycosylation. During the past decade, investigations of S-layer glycoproteins dealt with the elucidation of the highly variable glycan structures by a combination of chemical degradation methods and nuclear magnetic resonance spectroscopy. It was only recently that the molecular characterization of the genes governing the formation of the S-layer glycoprotein glycan chains has been initiated. The S-layer glycosylation (slg) gene clusters of four of the 11 known S-layer glycan structures from members of the Bacillaceae have now been studied. The clusters are approximately 16 to approximately 25 kb in size and transcribed as polycistronic units. They include nucleotide sugar pathway genes that are arranged as operons, sugar transferase genes, glycan processing genes, and transporter genes. So far, the biochemical functions only of the genes required for nucleotide sugar biosynthesis have been demonstrated experimentally. The presence of insertion sequences and the decrease of the G + C content at the slg locus suggest that the investigated organisms have acquired their specific S-layer glycosylation potential by lateral gene transfer. In addition, S-layer protein glycosylation requires the participation of housekeeping genes that map outside the cluster. The gene encoding the respective S-layer target protein is transcribed monocistronically and independently of the slg cluster genes. Its chromosomal location is not necessarily in close vicinity to the slg gene cluster.
bacterial glycosylation, S-layer, glycosylation gene cluster, sugar nucleotides, S-layer gene, glycan biosynthesis
NCBI PubMed ID: 15316277Publication DOI: 10.1023/B:GLYC.0000038290.74944.65Journal NLM ID: 8603310Publisher: Kluwer Academic Publishers
Institutions: University of Applied Life Sciences and Natural Resources, Center for NanoBiotechnology, Gregor-Mendel Strasse 33, A-1180 Wien, Austria
The publication contains the following compound(s):
- Compound ID: 1484
|
a-D-Fucp3NAc-(1-2)-+
|
a-D-Fucp3NAc-(1-2)-+ |
| |
-3)-a-D-Rhap-(1-3)-a-D-Rhap-(1-2)-a-D-Rhap-(1-2)-a-D-Rhap-(1- |
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Structure type: polymer chemical repeating unit
; n=15
Trivial name: S-layer glycoprotein
Reference(s) to other database(s): GTC:G12009WO, GlycomeDB:
9267
- Compound ID: 1485
|
a-D-Fucp3NAc-(1-2)-+
|
a-D-Fucp3NAc-(1-2)-+ |
| |
Me-3)-{{{-a-D-Rhap-(1-3)-a-D-Rhap-(1-2)-a-D-Rhap-(1-2)-a-D-Rhap-(1-3)-}}}/n=16/-{{{-a-D-Rhap-(1-3)-}}}/n=0-2/-a-D-Rhap-(1-3)-b-D-GalpNAc-(1-3)-Thr-(?--/Thr-67 in S-layer protein/ |
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Structure type: oligomer
Aglycon: Thr-67 in S-layer protein
Trivial name: S-layer glycoprotein
Compound class: core oligosaccharide
- Compound ID: 1486
Structure type: polymer chemical repeating unit
; n=15
Trivial name: S-layer glycoprotein
Reference(s) to other database(s): GTC:G42332GK, GlycomeDB:
27414
- Compound ID: 1487
|
Me-2)-{{{-a-L-Rhap-(1-3)-a-L-Rhap-(1-2)-b-L-Rhap-(1-2)-}}}/n=16/-{{{-a-D-Rhap-(1-3)-a-D-Rhap-(1-3)-}}}/n=0-1/-b-D-Galp-(1--/Thr-620/Ser-794 of S-layer protein/ |
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Structure type: oligomer
Aglycon: Thr-620/Ser-794 of S-layer protein
Trivial name: S-layer glycoprotein
Compound class: core oligosaccharide
- Compound ID: 1490
|
b-D-Quip3NAc-(1-6)-b-D-Galf-(1-4)-a-L-Rhap-(1-3)-+
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-3)-b-D-Manp-(1-4)-b-D-Galp-(1-4)-a-D-Glcp-(1- |
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Structure type: polymer chemical repeating unit
; n=17
Aglycon: core -> Tyr of S-layer protein
Trivial name: S-layer glycoprotein
Reference(s) to other database(s): GTC:G64894JE, GlycomeDB:
27384
- Compound ID: 1488
Structure type: polymer chemical repeating unit
; n=18
Trivial name: S-layer glycoprotein
Reference(s) to other database(s): GTC:G79460FL, GlycomeDB:
27416
- Compound ID: 1489
|
{{{-a-L-Rhap-(1-3)-D-gro-a-D-manHepp-(1-4)-}}}/n=18/-a-L-Rhap-(1-3)-D-gro-a-D-manHepp-(1-3)-{{{-a-D-Rhap-(1-3)-}}}/n=0-2/-b-D-GalpNAc-(1--/Ser-64/Thr-471 of S-layer protein/ |
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Structure type: oligomer
Aglycon: Ser-64/Thr-471 of S-layer protein
Trivial name: S-layer glycoprotein
Compound class: core oligosaccharide
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