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1. (Article ID: 5052)
Vinogradov E, St Michael F, Cox AD
The structure of the LPS O-chain of Fusobacterium nucleatum strain 25586 containing two novel monosaccharides, 2-acetamido-2,6-dideoxy-L-altrose and a 5-acetimidoylamino-3,5,9-trideoxy-gluco-non-2-ulosonic acid
Carbohydrate Research (2017)
10-15
Fusobacterium nucleatum is an anaerobic bacterium found in the human mouth where it causes periodontitis. Recently, it has been gaining attention as a potential causative agent for colorectal cancer and is strongly linked with pregnancy complications including pre-term and still births. Little is known about the virulence factors of this organism, and thus we have initiated studies to examine the bacterium's surface glycochemistry. We isolated lipopolysaccharide (LPS) from F. nucleatum strain 25586 and purified and performed structural analysis on the O-antigen polysaccharide. The polysaccharide contained two novel sugars, 2-acetamido-2,6-dideoxy-l-altrose (l-6dAltNAc) and a 5-acetimidoylamino-3,5,9-trideoxy-gluco-non-2-ulosonic acid (Non5Am), which was tentatively assigned the l-glycero-l-gluco configuration. The polysaccharide was found to have a trisaccharide repeating unit, which is phosphorylated with phosphocholine (PCho), and the following structure was established: -[-4-β-Nonp5Am-4-α-l-6dAltpNAc3PCho-3-β-d-QuipNAc-]- We propose the trivial name 'fusaminic acid' for the novel nonulosonic acid. It is the first occurrence of a 9-deoxynonulosonic acid with a hydroxyl group at C-7, which is occupied by an amino group in all monosaccharides of this class described so far.
Lipopolysaccharide, NMR, structure, Fusobacterium, Fusobacterium nucleatum, Fusaminic acid
NCBI PubMed ID: 28135570Publication DOI: 10.1016/j.carres.2017.01.002Journal NLM ID: 0043535Publisher: Elsevier
Correspondence: Evgeny.Vinogradov

nrc-cnrc.gc.ca
Institutions: Vaccine Program, Human Health Therapeutics Portfolio, National Research Council, Ottawa, ON K1A 0R6, Canada
Methods: 13C NMR, 1H NMR, GLC-MS, GC-MS, de-O-acylation, sugar analysis, acid hydrolysis, anion-exchange chromatography, HPLC, GPC, HF treatment, acetylation
The publication contains the following compound(s):
- Compound ID: 12706
|
Cho-(1--P--3)--+
|
-4)-b-Fusp5Am-(2-4)-a-L-6dAltpNAc-(1-3)-b-D-QuipNAc-(1-
Fus = 5-amino-3,5,9-trideoxy-L-glycero-L-gluco-non-2-ulosonic (fusaminic) acid |
Show graphically |
Structure type: polymer chemical repeating unit
Compound class: O-polysaccharide, O-antigen
- Compound ID: 12707
|
b-Fusp4Ac5Am-(2--/(1->4) O-antigen (ID 11979)/
Fus = 5-amino-3,5,9-trideoxy-L-glycero-L-gluco-non-2-ulosonic (fusaminic) acid |
Show graphically |
Structure type: monomer
Aglycon: (1->4) O-antigen (ID 11979)
Compound class: O-polysaccharide, O-antigen
- Compound ID: 12708
|
Cho-(1--P--3)--+
|
-4)-b-Fusp5Ac-(2-4)-a-L-6dAltpNAc-(1-3)-b-D-QuipNAc-(1-
Fus = 5-amino-3,5,9-trideoxy-L-glycero-L-gluco-non-2-ulosonic (fusaminic) acid |
Show graphically |
Structure type: polymer chemical repeating unit
Compound class: O-polysaccharide, O-antigen
- Compound ID: 12709
|
b-D-QuipNAc-(1-4)-b-Fusp5Ac-(2-4)-a-L-6dAltpNAc
Fus = 5-amino-3,5,9-trideoxy-L-glycero-L-gluco-non-2-ulosonic (fusaminic) acid |
Show graphically |
Structure type: oligomer
Compound class: O-polysaccharide, O-antigen
Reference(s) to other database(s): GTC:G28061HT
- Compound ID: 12710
|
b-D-QuipNAc-(1-4)-b-Fusp5Ac-(2-4)-b-L-6dAltpNAc
Fus = 5-amino-3,5,9-trideoxy-L-glycero-L-gluco-non-2-ulosonic (fusaminic) acid |
Show graphically |
Structure type: oligomer
Compound class: O-polysaccharide, O-antigen
Reference(s) to other database(s): GTC:G34758EY
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