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1. (Article ID: 5131)
Klein G, Müller-Loennies S, Lindner B, Kobylak N, Brade H, Raina S
Molecular and structural basis of inner core lipopolysaccharide alterations in Escherichia coli: incorporation of glucuronic acid and phosphoethanolamine in the heptose region
Journal of Biological Chemistry 288(12) (2013)
8111-8127
It is well established that lipopolysaccharide (LPS) often carries nonstoichiometric substitutions in lipid A and in the inner core. In this work, the molecular basis of inner core alterations and their physiological significance are addressed. A new inner core modification of LPS is described, which arises due to the addition of glucuronic acid on the third heptose with a concomitant loss of phosphate on the second heptose. This was shown by chemical and structural analyses. Furthermore, the gene whose product is responsible for the addition of this sugar was identified in all Escherichia coli core types and in Salmonella and was designated waaH. Its deduced amino acid sequence exhibits homology to glycosyltransferase family 2. The transcription of the waaH gene is positively regulated by the PhoB/R two-component system in a growth phase-dependent manner, which is coordinated with the transcription of the ugd gene explaining the genetic basis of this modification. Glucuronic acid modification was observed in E. coli B, K12, R2, and R4 core types and in Salmonella. We also show that the phosphoethanolamine (P-EtN) addition on heptose I in E. coli K12 requires the product of the ORF yijP, a new gene designated as eptC. Incorporation of P-EtN is also positively regulated by PhoB/R, although it can occur at a basal level without a requirement for any regulatory inducible systems. This P-EtN modification is essential for resistance to a variety of factors, which destabilize the outer membrane like the addition of SDS or challenge to sublethal concentrations of Zn(2+).
oligosaccharide, Escherichia coli, glycosyltransferases, phosphoethanolamine, glucuronic acid, lipopolysaccharide (LPS), glycobiology
NCBI PubMed ID: 23372159Publication DOI: 10.1074/jbc.M112.445981Journal NLM ID: 2985121RPublisher: Baltimore, MD: American Society for Biochemistry and Molecular Biology
Correspondence: satish.raina

pg.gda.pl
Institutions: Leibniz-Center for Medicine and Biosciences, Parkallee 22, 23845 Borstel, Germany, Department of Microbiology, Gdansk University of Technology, Narutowicza 11/12, 80-233 Gdansk, Poland
Methods: 13C NMR, 1H NMR, GLC-MS, NMR-2D, PCR, 31P NMR, ESI-MS, HPAEC, MALDI-MS, genetic methods, alkaline hydrolysis, extraction, transcription analysis, cloning, hydrazinolysis
The publication contains the following compound(s):
- Compound ID: 12899
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EtN-(1-0)-?%P-7)-a-Kdop-(2-4)-+
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EtN-(1-0)-?%P---P--4)-+ |
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L-gro-a-D-manHepp-(1-7)-+ | |
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a-D-Galp-(1-6)-+ | | |
| | | |
L-gro-a-D-manHepp-(1-6)-a-D-Glcp-(1-2)-a-D-Glcp-(1-3)-a-D-Glcp-(1-3)-L-gro-a-D-manHepp-(1-3)-L-gro-a-D-manHepp-(1-5)-a-Kdop-(2--/(2->6) lipid A/
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P-4)-+ |
Show graphically |
Structure type: oligomer
Aglycon: (2->6) lipid A
Compound class: core oligosaccharide
Reference(s) to other database(s): GTC:G89391NP
- Compound ID: 12900
|
EtN-(1-0)-?%P-7)-+
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Rhap-(1-5)-a-Kdop-(2-4)-a-Kdop-(2-4)-+
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EtN-(1-0)-?%P---P--4)-+ |
| |
L-gro-a-D-manHepp-(1-7)-+ | |
| | |
a-D-Galp-(1-6)-+ | | |
| | | |
a-D-Glcp-(1-3)-a-D-Glcp-(1-3)-L-gro-a-D-manHepp-(1-3)-L-gro-a-D-manHepp-(1-5)-a-Kdop-(2--/(2->6) lipid A/ |
Show graphically |
Structure type: oligomer
Aglycon: (2->6) lipid A
Compound class: core oligosaccharide
Reference(s) to other database(s): GTC:G52447BI
- Compound ID: 12901
|
EtN-(1-0)-?%P-7)-a-Kdop-(2-4)-+
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EtN-(1-0)-?%P---P--4)-+ |
| |
b-D-GlcpA-(1-7)-L-gro-a-D-manHepp-(1-7)-+ | |
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a-D-Galp-(1-6)-+ | | |
| | | |
L-gro-a-D-manHepp-(1-6)-a-D-Glcp-(1-2)-a-D-Glcp-(1-3)-a-D-Glcp-(1-3)-L-gro-a-D-manHepp-(1-3)-L-gro-a-D-manHepp-(1-5)-a-Kdop-(2--/(2->6) lipid A/ |
Show graphically |
Structure type: oligomer
Aglycon: (2->6) lipid A
Compound class: core oligosaccharide
Reference(s) to other database(s): GTC:G19769TQ
- Compound ID: 12902
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EtN-(1-0)-?%P-7)-+
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Rhap-(1-5)-a-Kdop-(2-4)-a-Kdop-(2-4)-+
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EtN-(1-0)-?%P---P--4)-+ |
| |
b-D-GlcpA-(1-7)-L-gro-a-D-manHepp-(1-7)-+ | |
| | |
a-D-Galp-(1-6)-+ | | |
| | | |
a-D-Glcp-(1-3)-a-D-Glcp-(1-3)-L-gro-a-D-manHepp-(1-3)-L-gro-a-D-manHepp-(1-5)-a-Kdop-(2--/(2->6) lipid A/ |
Show graphically |
Structure type: oligomer
Aglycon: (2->6) lipid A
Compound class: core oligosaccharide
Reference(s) to other database(s): GTC:G45160CB
- Compound ID: 12903
|
a-D-Glcp-(1-3)-a-D-Glcp-(1-3)-+ P-4)-+ a-Kdop-(2-4)-+
| | |
b-D-GlcpA-(1-7)-L-gro-a-D-manHepp-(1-7)-L-gro-a-D-manHepp-(1-3)-L-gro-a-D-manHepp-(1-5)-a-Kdop-(2-6)-b-D-GlcpN-(1-6)-a-D-GlcpN-(1-P |
Show graphically |
Structure type: oligomer
Compound class: core oligosaccharide
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