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1. (Article ID: 564)
Sweet CR, Williams AH, Karbarz MJ, Werts C, Kalb SR, Cotter RJ, Raetz CR
Enzymatic synthesis of lipid A molecules with four amide-linked acyl chains. LpxA acyltransferases selective for an analog of UDP-N-acetylglucosamine in which an amine replaces the 3'-hydroxyl group
Journal of Biological Chemistry 279(24) (2004)
25411-25419
LpxA of Escherichia coli catalyzes the acylation of the glucosamine 3-OH group of UDP-GlcNAc, using R-3-hydroxymyristoyl-acyl carrier protein (ACP) as the donor substrate. We now demonstrate that LpxA in cell extracts of Mesorhizobium loti and Leptospira interrogans, which synthesize lipid A molecules containing 2,3-diamino-2,3-dideoxy-d-glucopyranose (GlcN3N) units in place of glucosamine, do not acylate UDP-GlcNAc. Instead, these LpxA acyltransferases require a UDP-Glc-NAc derivative (designated UDP 2-acetamido-3-amino-2,3-dideoxy-α-D-glucopyranose or UDP-GlcNAc3N), characterized in the preceding paper, in which an amine replaces the glucosamine 3-OH group. L. interrogans LpxA furthermore displays absolute selectivity for 3-hydroxylauroyl-ACP as the donor, whereas M. loti LpxA functions almost equally well with 10-, 12-, and 14-carbon 3-hydroxyacyl-ACPs. The substrate selectivity of L. interrogans LpxA is consistent with the structure of L. interrogans lipid A. The mechanism of L. interrogans LpxA appears to be similar to that of E. coli LpxA, given that the essential His(125) residue of E. coli LpxA is conserved and is also required for acyltransferase activity in L. interrogans. Acidithiobacillus ferrooxidans (an organism that makes lipid A molecules containing both GlcN and GlcN3N) has an ortholog of LpxA that is selective for UDP-GlcNAc3N, but the enzyme also catalyzes the acylation of UDP-GlcNAc at a slow rate. E. coli LpxA acylates UDP-GlcNAc and UDP-GlcNAc3N at comparable rates in vitro. However, UDP-GlcNAc3N is not synthesized in vivo, because E. coli lacks gnnA and gnnB. When the latter are supplied together with A. ferrooxidans lpxA, E. coli incorporates a significant amount of GlcN3N into its lipid A.
Escherichia coli, lipid A, Acidithiobacillus, Acidithiobacillus ferrooxidans, acylation, acyltransferase, enzymatic synthesis, Leptospira interrogans
NCBI PubMed ID: 15044493Publication DOI: 10.1074/jbc.M400597200Journal NLM ID: 2985121RPublisher: Baltimore, MD: American Society for Biochemistry and Molecular Biology
Correspondence: raetz

biochem.duke.edu
Institutions: Department of Biochemistry, Duke University Medical Center, Durham, North Carolina 27710, USA, Unité de Bactériologie Moléculaire et Médicale, Institut Pasteur, Paris, 75015, France, Middle Atlantic Mass Spectrometry Laboratory, Department of Pharmacology and Molecular Sciences, The Johns Hopkins University School of Medicine, Baltimore, Maryland 21205
Methods: PCR, DNA techniques, TLC, MALDI-TOF MS, genetic methods, biochemical methods, radioactivity measurement, mild alkaline hydrolysis
The publication contains the following compound(s):
- Compound ID: 314
|
R-3HOMyr-(1-2)-+
|
Myr-(1-3)-R-3HOMyr-(1-3)-+ |
| |
Lau-(1-3)-R-3HOMyr-(1-2)-b-D-GlcpN-(1-6)-a-D-GlcpN-(1-P
| |
P-4)-+ |
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R-3HOMyr-(1-3)-+ |
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Structure type: oligomer
Compound class: LPS, lipid A, glycolipid, phosphoglycolipid
- Compound ID: 1598
|
R-3HOMyr-(1-2)-+
|
R-3HOMyr-(1-3)-+ |
| |
R-3HOMyr-(1-2)-b-D-GlcpN-(1-6)-a-D-GlcpN-(1-P
| |
P-4)-+ |
|
R-3HOMyr-(1-3)-+ |
Show graphically |
Structure type: oligomer
Trivial name: lipid IV A, lipid IV(A)
Compound class: lipid A, glycolipid
- Compound ID: 1792
|
R-3HOMyr-(1-2)-+
|
R-3HOMyr-(1-3)-+ |
| |
R-3HOMyr-(1-2)-b-D-GlcpN-(1-6)-a-D-GlcpN3N-(1-P
| |
P-4)-+ |
|
R-3HOMyr-(1-3)-+ |
Show graphically |
Structure type: oligomer
Compound class: lipid A
- Compound ID: 1793
|
R-3HOMyr-(1-3)-+ R-3HOMyr-(1-2)-+
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R-3HOMyr-(1-2)-b-D-GlcpN3N-(1-6)-a-D-GlcpN-(1-P
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P-4)-+ R-3HOMyr-(1-3)-+ |
Show graphically |
Structure type: oligomer
Compound class: lipid A
- Compound ID: 1794
|
R-3HOMyr-(1-3)-+ R-3HOMyr-(1-2)-+
| |
R-3HOMyr-(1-2)-b-D-GlcpN3N-(1-6)-a-D-GlcpN3N-(1-P
| |
P-4)-+ R-3HOMyr-(1-3)-+ |
Show graphically |
Structure type: oligomer
Compound class: lipid A
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