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1. (Article ID: 5759)
Di Lorenzo F, Pither MD, Scarinci I, Martufi M, Guzman-Caldentey J, Lakomiec E, Jachymek W, Bruijns SCM, Santamaria SM, Frick JS, van Kooyk Y, Chiodo F, Silipo A, Bernardini ML, Molinaro A
Pairing Bacteroides vulgatus LPS Structure with Its Immunomodulatory Effects on Human Cellular Models
ACS Central Science 6(9) (2020)
1602-1616
The gut microbiota guide the development of the host immune system by setting a systemic threshold for immune activation. Lipopolysaccharides (LPSs) from gut bacteria are able to trigger systemic and local proinflammatory and immunomodulatory responses, and this capability strongly relies on their fine structures. Up to now, only a few LPS structures from gut commensals have been elucidated; therefore, the molecular motifs that may be important for LPS-mammalian cell interactions at the gut level are still obscure. Here, we report on the full structure of the LPS isolated from one of the prominent species of the genus Bacteroides, Bacteroides vulgatus. The LPS turned out to consist of a particular chemical structure based on hypoacylated and mono-phosphorylated lipid A and with a galactofuranose-containing core oligosaccharide and an O-antigen built up of mannose and rhamnose. The evaluation of the immunological properties of this LPS on human in vitro models revealed a very interesting capability to produce anti-inflammatory cytokines and to induce a synergistic action of MD-2/TLR4- and TLR2-mediated signaling pathways.
human, Bacteroides, cytokines, LPS structure, immunomodulatory, gut microbiota
NCBI PubMed ID: 32999936Publication DOI: 10.1021/acscentsci.0c00791Journal NLM ID: 101660035Publisher: Washington DC: ACS
Correspondence: flaviana.dilorenzo

unina.it; molinaro

unina.it
Institutions: Department of Chemical Sciences, University of Naples Federico II, 80126 Naples, Italy, Task Force on Microbiome Studies, University of Naples Federico II, 80126 Naples, Italy, Department of Biology and Biotechnologies 'C. Darwin', Sapienza-University of Rome, 00185 Rome, Italy, Department of Structural and Chemical Biology, Centro de Investigaciones Biologicas, CIB-CSIC, 28040 Madrid, Spain, Hirszfeld Institute of Immunology and Experimental Therapy, Polish Academy of Sciences, Wroclaw 53-114, Poland, Department of Molecular Cell Biology and Immunology, Amsterdam Infection & Immunity Institute and Cancer Center Amsterdam, Amsterdam UMC, Vrije Universiteit Amsterdam, Amsterdam 1081 HV, The Netherlands, Institute of Medical Microbiology and Hygiene, University of Tubingen, 72076 Tubingen, Germany
Methods: 13C NMR, 1H NMR, GLC-MS, NMR-2D, SDS-PAGE, sugar analysis, chemical analysis, ELISA, 31P NMR, deacylation, ESI-MS, MS/MS, MALDI-TOF MS, GPC, MD simulation, measurement of cytokines activity
The publication contains the following compound(s):
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2. (Article ID: 6049)
Di Lorenzo F, Duda KA, Lanzetta R, Silipo A, De Castro C, Molinaro A
A Journey from Structure to Function of Bacterial Lipopolysaccharides
Chemical Reviews (2021)
Lipopolysaccharide (LPS) is a crucial constituent of the outer membrane of most Gram-negative bacteria, playing a fundamental role in the protection of bacteria from environmental stress factors, in drug resistance, in pathogenesis, and in symbiosis. During the last decades, LPS has been thoroughly dissected, and massive information on this fascinating biomolecule is now available. In this Review, we will give the reader a third millennium update of the current knowledge of LPS with key information on the inherent peculiar carbohydrate chemistry due to often puzzling sugar residues that are uniquely found on it. Then, we will drive the reader through the complex and multifarious immunological outcomes that any given LPS can raise, which is strictly dependent on its chemical structure. Further, we will argue about issues that still remain unresolved and that would represent the immediate future of LPS research. It is critical to address these points to complete our notions on LPS chemistry, functions, and roles, in turn leading to innovative ways to manipulate the processes involving such a still controversial and intriguing biomolecule.
Lipopolysaccharide, LPS, structure, Pathogenesis, carbohydrate, function, gram negative bacteria
NCBI PubMed ID: 34286971Publication DOI: 10.1021/acs.chemrev.0c01321Journal NLM ID: 2985134RPublisher: Chem Rev
Correspondence: Antonio Molinaro
unina.it>
Institutions: Department of Chemical Sciences, University of Naples Federico II, via Cinthia 4, 80126 Naples, Italy, Task Force on Microbiome Studies, University of Naples Federico II, Via Cinthia 4, 80126 Naples, Italy, Research Center Borstel Leibniz Lung Center, Parkallee 4a, 23845 Borstel, Germany, Department of Agricultural Sciences, University of Naples Federico II, Via Universita 96, 80055 Portici, Naples, Italy, Department of Chemistry, School of Science, Osaka University, 1-1 Osaka University Machikaneyama, Toyonaka, Osaka 560-0043, Japan
The publication contains the following compound(s):
- Compound ID: 9223
|
a-Neup5Ac-(2-3)-b-D-Galp-(1-4)-b-D-GlcpNAc-(1-3)-b-D-Galp-(1-4)-b-D-Glcp |
Show graphically |
Structure type: fragment of a bigger structure
Compound class: core oligosaccharide
Reference(s) to other database(s): GTC:G01767JJ, GlycomeDB:
37903
- Compound ID: 15666
|
Subst-(1-4)-+
|
/Variants 0/-b-D-Glcp-(1-4)-+
|
/Variants 2/-+ EtN-(1--P--6)--+ | EtN-(1---P---P---4)-+
| | | |
/Variants 1/-L-gro-a-D-manHepp-(1-2)-L-gro-a-D-manHepp-(1-3)-L-gro-a-D-manHepp-(1-5)-a-Kdop-(2--/(2->6)lipid A/
|
Subst-(1-3)-+
/Variants 0/ is:
Cho-(1--P--6)--
OR (exclusively)
L-gro-D-manHepp-(1-6)-
OR (exclusively)
D-gro-D-manHepp-(1-6)-
/Variants 1/ is:
Gly-(1-3)-
OR (exclusively)
b-D-Galp-(1-3)-
OR (exclusively)
Subst-(1-3)-
OR (exclusively)
Ac-3)-
OR (exclusively)
EtN-(1-0)-?%P-3)-
/Variants 2/ is:
b-D-Galp-(1-2)-
OR (exclusively)
?%Subst-(1-2)-
Subst = H, sugar residue or OS unit |
Show graphically |
Structure type: oligomer
Aglycon: (2->6)lipid A
Trivial name: conserved tri-heptosyl inner core
Compound class: LOS
- Compound ID: 15667
Structure type: fragment of a bigger structure
Compound class: core oligosaccharide
- Compound ID: 15668
|
b-D-GalpNAc-(1-3)-a-D-Galp-(1-4)-b-D-Galp-(1-4)-b-D-Glcp-(1-4)-b-D-Glcp |
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Structure type: fragment of a bigger structure
Compound class: core oligosaccharide
- Compound ID: 15669
|
b-D-Galp-(1-4)-D-gro-a-D-manHepp-(1-6)-+
|
b-D-GalpNAc-(1-3)-a-D-Galp-(1-4)-b-D-Galp-(1-4)-b-D-Glcp-(1-4)-b-D-Glcp |
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Structure type: fragment of a bigger structure
Compound class: core oligosaccharide
- Compound ID: 15670
Structure type: fragment of a bigger structure
Compound class: core oligosaccharide
- Compound ID: 15671
|
b-D-GalpNAc-(1-3)-a-D-Galp-(1-4)-b-D-Galp-(1-6)-D-gro-a-D-manHepp-(1-6)-b-D-Glcp |
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Structure type: fragment of a bigger structure
Compound class: core oligosaccharide
- Compound ID: 15672
Structure type: fragment of a bigger structure
Compound class: core oligosaccharide
- Compound ID: 15673
Structure type: fragment of a bigger structure
Compound class: core oligosaccharide
- Compound ID: 15674
|
b-D-GalpNAc-(1-3)-a-D-Galp-(1-4)-b-D-Galp-(1-4)-b-D-Glcp-(1-4)-a-D-Glcp |
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Structure type: fragment of a bigger structure
Compound class: core oligosaccharide
- Compound ID: 15675
Structure type: fragment of a bigger structure
Compound class: core oligosaccharide
- Compound ID: 528
|
b-D-Galp-(1-4)-b-D-Glcp-(1-4)-+
|
a-D-GlcpNAc-(1-2)-+ | a-Kdop-(2-4)-+
| | |
EtN-(1--P--3)--L-gro-a-D-manHepp-(1-3)-L-gro-a-D-manHepp-(1-5)-a-Kdop-(2--/lipid A/ |
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Structure type: oligomer
Aglycon: lipid A
Trivial name: core oligosaccharide L8
Compound class: core oligosaccharide, LOS, LPS
Reference(s) to other database(s): GTC:G66058QA
- Compound ID: 797
|
a-D-GlcpNAc-(1-2)-+
|
EtN-(1--P--3)--L-gro-a-D-manHepp-(1-3)-+ a-Kdop-(2-4)-+
| |
b-D-Galp-(1-4)-b-D-GlcpNAc-(1-3)-b-D-Galp-(1-4)-b-D-Glcp-(1-4)-L-gro-a-D-manHepp-(1-5)-a-Kdop-(2--/lipid A/ |
Show graphically |
Structure type: oligomer
Aglycon: lipid A
Trivial name: core oligosaccharide L7
Compound class: core oligosaccharide, LOS
Reference(s) to other database(s): GTC:G45549QG
- Compound ID: 6318
|
Lau-(1-3)-R-3HOMyr-(1-2)-+
|
Lau-(1-3)-R-3HOMyr-(1-2)-+ |
| |
EtN-(1---P---P---4)-b-D-GlcpN-(1-6)-a-D-GlcpN-(1---P---P---1)-EtN
| |
R-3HOLau-(1-3)-+ |
|
R-3HOLau-(1-3)-+ |
Show graphically |
Structure type: oligomer
Compound class: lipid A
- Compound ID: 15676
|
a-D-GlcpNAc-(1-2)-+
|
EtN-(1--P--3)--L-gro-a-D-manHepp-(1-3)-+ a-Kdop-(2-4)-+
| |
a-Neup5Ac-(2-3)-b-D-Galp-(1-4)-b-D-GlcpNAc-(1-3)-b-D-Galp-(1-4)-b-D-Glcp-(1-4)-L-gro-a-D-manHepp-(1-5)-a-Kdop-(2--/lipid A/ |
Show graphically |
Structure type: oligomer
Aglycon: lipid A
Trivial name: core oligosaccharide L3
Compound class: LOS
- Compound ID: 15677
|
a-D-GlcpNAc-(1-2)-+
|
EtN-(1--P--3)--L-gro-a-D-manHepp-(1-3)-+ a-Kdop-(2-4)-+
| |
a-Neup5Ac-(2-6)-a-D-Galp-(1-4)-b-D-Galp-(1-4)-b-D-Glcp-(1-4)-L-gro-a-D-manHepp-(1-5)-a-Kdop-(2--/lipid A/ |
Show graphically |
Structure type: oligomer
Aglycon: lipid A
Trivial name: core oligosaccharide L1
Compound class: LOS
- Compound ID: 15678
|
a-D-GlcpNAc-(1-2)-+
|
/Variants 0/-L-gro-a-D-manHepp3Ac-(1-3)-+ a-Kdop-(2-4)-+
| |
a-Neup5Ac-(2-3)-b-D-Galp-(1-4)-b-D-GlcpNAc-(1-3)-b-D-Galp-(1-4)-b-D-Glcp-(1-4)-L-gro-a-D-manHepp-(1-5)-a-Kdop-(2--/lipid A/
/Variants 0/ is:
EtN-(1--P--7)--
OR (exclusively)
EtN-(1--P--6)-- |
Show graphically |
Structure type: oligomer
Aglycon: lipid A
Trivial name: core oligosaccharide L4
Compound class: LOS
- Compound ID: 15679
|
a-D-GlcpNAc-(1-2)-+
|
/Variants 0/-L-gro-a-D-manHepp3Ac-(1-3)-+ a-Kdop-(2-4)-+
| |
b-D-Galp-(1-4)-b-D-GlcpNAc-(1-3)-b-D-Galp-(1-4)-b-D-Glcp-(1-4)-L-gro-a-D-manHepp-(1-5)-a-Kdop-(2--/lipid A/
/Variants 0/ is:
EtN-(1--P--7)--
OR (exclusively)
EtN-(1--P--6)-- |
Show graphically |
Structure type: oligomer
Aglycon: lipid A
Trivial name: core oligosaccharide L9
Compound class: LOS
- Compound ID: 15680
|
b-D-Galp-(1-4)-b-D-GlcpNAc-(1-3)-b-D-Galp-(1-4)-b-D-Glcp-(1-4)-+
|
a-D-GlcpNAc-(1-2)-+ | a-Kdop-(2-4)-+
| | |
/Variants 0/-L-gro-a-D-manHepp-(1-3)-L-gro-a-D-manHepp-(1-5)-a-Kdop-(2--/lipid A/
|
a-D-Glcp-(1-3)-+
/Variants 0/ is:
EtN-(1--P--7)--
OR (exclusively)
EtN-(1--P--6)-- |
Show graphically |
Structure type: oligomer
Aglycon: lipid A
Trivial name: core oligosaccharide L2
Compound class: LOS
- Compound ID: 15681
|
b-D-GlcpNAc-(1-3)-b-D-Galp-(1-4)-b-D-Glcp-(1-4)-+
|
a-D-GlcpNAc-(1-2)-+ | a-Kdop-(2-4)-+
| | |
/Variants 0/-L-gro-a-D-manHepp3Ac-(1-3)-L-gro-a-D-manHepp-(1-5)-a-Kdop-(2--/lipid A/
/Variants 0/ is:
EtN-(1--P--7)--
OR (exclusively)
EtN-(1--P--6)-- |
Show graphically |
Structure type: oligomer
Aglycon: lipid A
Trivial name: core oligosaccharide L6
Compound class: LOS
- Compound ID: 314
|
R-3HOMyr-(1-2)-+
|
Myr-(1-3)-R-3HOMyr-(1-3)-+ |
| |
Lau-(1-3)-R-3HOMyr-(1-2)-b-D-GlcpN-(1-6)-a-D-GlcpN-(1-P
| |
P-4)-+ |
|
R-3HOMyr-(1-3)-+ |
Show graphically |
Structure type: oligomer
Compound class: LPS, lipid A, glycolipid, phosphoglycolipid
- Compound ID: 1598
|
R-3HOMyr-(1-2)-+
|
R-3HOMyr-(1-3)-+ |
| |
R-3HOMyr-(1-2)-b-D-GlcpN-(1-6)-a-D-GlcpN-(1-P
| |
P-4)-+ |
|
R-3HOMyr-(1-3)-+ |
Show graphically |
Structure type: oligomer
Trivial name: lipid IV A, lipid IV(A)
Compound class: lipid A, glycolipid
- Compound ID: 15685
|
Pam-(1-3)-3HOMyr-(1-2)-+
|
Lau-(1-3)-3HOMyr-(1-3)-+ |
| |
Myr-(1-3)-3HOMyr-(1-2)-b-D-GlcpN-(1-6)-a-D-GlcpN-(1--P--0)--?%P-1)-EtN
| |
b-L-Arap4N-(1--P--4)--+ 3HOMyr-(1-3)-+ |
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Structure type: oligomer
Compound class: lipid A
- Compound ID: 2029
Structure type: polymer chemical repeating unit
Trivial name: i-antigen, N-acetyllactosaminoglycan, poly-(N-acetyl-b-lactosamine) chain, polylacNAc O-chain, poly(N-acetyl-b-lactosamine) chain, Poly LacNAc
Compound class: O-polysaccharide, O-antigen
Reference(s) to other database(s): GTC:G39453SO, GlycomeDB:
15913
- Compound ID: 12637
Structure type: oligomer
Trivial name: Lewis a antigen Le(a), Lewis a antigen, Lewis A antigen Le(a)
Reference(s) to other database(s): GTC:G39023AU
- Compound ID: 12638
Structure type: oligomer
Trivial name: Lewis b antigen Le(b), Lewis b antigen, Lewis B antigen Le(b)
Reference(s) to other database(s): GTC:G00048MO
- Compound ID: 12640
Structure type: oligomer
Trivial name: Lewis Y antigen, Lewis Y antigen Le(y), Lewis y antigen Le(y)
Reference(s) to other database(s): GTC:G00052MO
- Compound ID: 12641
Structure type: oligomer
Trivial name: Lewis X antigen, Lewis X antigen Le(x), Lewis x antigen Le(x)
Reference(s) to other database(s): GTC:G00051MO
- Compound ID: 711
|
S-3HOBut-(1-7)-+
|
-4)-b-Sugp5Ac-(2-2)-S-2HOGlt-(5-4)-b-D-QuipNAc4N3Ac-(1-
Sug = 5,7,8-triamino-3,5,7,8,9-pentadeoxy-?-glycero-L-manno-non-2-ulosonic acid = SMILES CC({7}[C@@H]([C@@H]1O{2}[C@@](C(O)=O)(C{4}[C@@H]({5}[C@@H]1N)O)O)N)N |
Show graphically |
Structure type: polymer chemical repeating unit
Compound class: O-polysaccharide, O-antigen
- Compound ID: 15662
|
b-D-Galp-(1-4)-+ L-gro-a-D-manHepp-(1-7)-+ P-4)-+ a-Kdop-(2-4)-+
| | | |
a-D-Galp-(1-2)-a-D-Galp-(1-2)-a-D-Glcp-(1-3)-a-D-Glcp-(1-3)-L-gro-a-D-manHepp-(1-3)-L-gro-a-D-manHepp-(1-5)-a-Kdop
|
P-4)-+ |
Show graphically |
Structure type: oligomer
Compound class: core oligosaccharide
- Compound ID: 15686
|
2HOLau-(1-3)-3HOLau-(1-2)-+
|
Lau-(1-3)-3HODco-(1-3)-+ |
| |
Lau-(1-3)-3HOLau-(1-2)-b-D-GlcpN-(1-6)-a-D-GlcpN-(1--P--1)--b-L-Arap4N
|
b-L-Arap4N-(1--P--4)--+ |
Show graphically |
Structure type: oligomer
Compound class: lipid A
- Compound ID: 15683
|
Subst2-25Ac-(1-3)-R-3HOMyr-(1-2)-+ R-3HOMyr-(1-2)-+
| |
Subst-(34-31)-Subst1-(1-3)-R-3HOLau-(1-3)-b-D-GlcpN3N-(1-6)-a-D-GlcpN3N-(1-1)-a-D-GalpA
| |
a-D-Manp-(1-6)-a-D-Manp-(1-4)-+ R-3HOLau-(1-3)-+
Subst = 34-carboxyl-bacteriohopane-32,33-diol = SMILES CC(CCC{32}(O){33}C(O){34}C(O)=O)C1C2CC[C@@]3(C)[C@]4(C)CCC5C(C)(C)CCC[C@]5(C)C4CCC3[C@@]2(C)CC1;
Subst1 = 2R,31-dihydroxy dotriacontanoic acid = SMILES C{31}C(O)CCCCCCCCCCCCCCCCCCCCCCCCCCCC{2}[C@@H](O){1}C(O)=O;
Subst2 = 25-hydroxy-hexacosanoic acid = SMILES C{25}C(O)CCCCCCCCCCCCCCCCCCCCCCC{1}C(O)=O |
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Structure type: oligomer
Trivial name: HoLA
Compound class: lipid A
- Compound ID: 14479
|
a-Kdop-(2-2)-a-D-Glcp-(1-4)-+
|
a-D-GlcpA-(1-3)-+ |
| |
3HOBut-(1-7)-b-Pse5Ac-(2-3)-3HOBut-(1-7)-b-Pse5Ac-(2-2)-b-D-GalpA-(1-4)-a-D-GalpA-(1-2)-b-D-GlcpA-(1-4)-a-D-GalpA-(1-3)-b-D-Glcp-(1-6)-a-D-Galp-(1-5)-a-Kdop |
Show graphically |
Structure type: oligomer
Compound class: core oligosaccharide, LPS
- Compound ID: 3770
|
3oxoMyr-(1-2)-+
|
3HODco-(1-3)-+ |
| |
C14={7}-(1-3)-3HOMyr-(1-2)-b-D-GlcpN-(1-6)-a-D-GlcpN-(1-P
| |
P-4)-+ 3HODco-(1-3)-+ |
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Structure type: oligomer
Trivial name: pentaacyl monophosphoryl lipid A
Compound class: LPS, lipid A, glycolipid
Reference(s) to other database(s): CCSD:
48486, CBank-STR:9750
- Compound ID: 3969
|
-3)-R-3HOBut-(1-7)-b-Psep5Ac-(2-4)-a-D-FucpNAc-(1-3)-b-D-QuipNAc-(1- |
Show graphically |
Structure type: polymer chemical repeating unit
Compound class: O-polysaccharide, O-antigen
- Compound ID: 5484
Structure type: polymer chemical repeating unit
Compound class: O-polysaccharide, O-antigen
- Compound ID: 9265
Structure type: oligomer
Compound class: core oligosaccharide
Reference(s) to other database(s): GTC:G25919EA
- Compound ID: 13145
|
R-3HOMyr-(1-3)-+
|
?%b-L-Arap4N-(1--P--1)--+ |
| |
?%b-L-Arap4N-(1--P--4)--+ | |
| | |
Myr-(1-3)-R-3HOPam-(1-2)-b-D-GlcpN-(1-6)-a-D-GlcpN
| |
R-3HOMyr-(1-3)-+ |
|
R-3HOPam-(1-2)-+ |
Show graphically |
Structure type: oligomer
Compound class: lipid A
- Compound ID: 10622
|
b-L-ArapNAc3NAc4NAc-(1-4)-b-D-GlcpNAc3NAcA6NH2-(1-3)-a-L-Rhap-(1-2)-a-L-Rhap-(1-4)-+
|
-3)-b-D-QuipNAc4NAc-(1-3)-a-D-Galp-(1-
AraN3N4N = 2,3,4-triamino-2,3,4-trideoxy-L-arabinose |
Show graphically |
Structure type: polymer chemical repeating unit
Compound class: O-polysaccharide, O-antigen
- Compound ID: 12548
|
Pam-(1-3)-3HOMyr-(1-3)-+ 3HOMyr-(1-2)-+
| |
LIP25Ac-(1-3)-3HOMyr-(1-2)-b-D-GlcpN3N-(1-6)-a-D-GlcpN3N-(1-1)-a-D-GalpA
| |
a-D-Manp-(1-4)-+ 3HOMyr-(1-3)-+ |
Show graphically |
Structure type: oligomer
Compound class: lipid A
- Compound ID: 15682
|
a-L-Fucp-(1-3)-+ a-L-Fucp-(1-3)-+ a-D-Glcp-(1-4)-b-D-Galp-(1-7)-+ EtN-(1--P--7)--+
| | | |
a-L-Fucp-(1-2)-b-D-Galp-(1-4)-b-D-GlcpNAc-(1-3)-{{{-b-D-Galp-(1-4)-b-D-GlcpNAc-(1-3)-}}}{{{-b-D-Galp-(1-4)-a-D-GlcpNAc-(1-3)-}}}b-D-Galp-(1-4)-a-D-GlcpNAc-(1-2)-D-gro-a-D-manHepp-(1-3)-{{{-D-gro-a-D-manHepp-(1-3)-}}}a-D-Glcp-(1-6)-{{{-a-D-Glcp-(1-6)-}}}/n=4/-D-gro-a-D-manHepp-(1-3)-a-L-Fucp-(1-3)-a-D-GlcpNAc-(1-2)-D-gro-a-D-manHepp-(1-2)-L-gro-a-D-manHepp-(1-3)-L-gro-a-D-manHepp-(1-5)-a-Kdo-(2--/lipid A/ |
Show graphically |
Structure type: oligomer
Aglycon: lipid A
Compound class: LPS
- Compound ID: 15684
|
3HOiMar-(1-2)-+
|
?%3HOPam-(1-3)-+ |
| |
iC15-(1-3)-3HOiMar-(1-2)-b-D-GlcpN-(1-6)-a-D-GlcpN-(1-P
|
3HOPam-(1-3)-+ |
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Structure type: oligomer
Compound class: lipid A
- Compound ID: 7740
Structure type: polymer chemical repeating unit
Compound class: O-polysaccharide, O-antigen
- Compound ID: 15663
|
/Variants 0/-+
|
/Variants 1/-+ |
| |
a-D-GlcpNAc-(1-6)-+ | |
| | |
b-D-Galp-(1-6)-+ | | |
| | | |
a-D-Galp-(1-4)-a-D-Galp-(1-3)-a-D-Galp-(1-3)-a-D-Manp-(1-5)-a-Kdop
|
/Variants 2/-+
/Variants 0/ is:
P-4)-
OR (exclusively)
EtN-(1--P--4)--
/Variants 1/ is:
P-4)-
OR (exclusively)
EtN-(1--P--4)--
/Variants 2/ is:
P-2)-
OR (exclusively)
EtN-(1--P--2)-- |
Show graphically |
Structure type: oligomer
Compound class: core oligosaccharide
- Compound ID: 15665
|
a-D-GlcpN(%)Me-(1-7)-L-gro-a-D-manHepp-(1-3)-a-D-Manp4Me-(1-5)-a-Kdop-(2-4)-a-D-Manp-(1-4)-a-D-Glcp-(1-4)-a-Kdop |
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Structure type: oligomer
Compound class: core oligosaccharide
- Compound ID: 12365
|
b-D-Glcp-(1-6)-+
|
b-D-Quip1N4NAc-(1-6)-+ |
| |
-4)-a-D-GalpNAc-(1-3)-b-D-QuipNAc-(1-3)-a-D-GalpA-(1-4)-a-D-GalpNAc-(1- |
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Structure type: polymer chemical repeating unit
Compound class: O-polysaccharide, O-antigen
- Compound ID: 13150
|
a-Kop-(2-6)-+
|
Pam-(1-3)-3HOMyr-(1-3)-+ | 3HOSte-(1-2)-+
| | |
Pam-(1-3)-3HOSte-(1-2)-b-D-GlcpN3N-(1-6)-a-D-GlcpN-(1-1)-a-D-GlcpA
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a-D-Manp-(1-4)-+ 3HOMyr-(1-3)-+ |
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Structure type: oligomer
Compound class: lipid A
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