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1. (Article ID: 5871)
Yakovlieva L, Walvoort MTC
Processivity in Bacterial Glycosyltransferases
ACS Chemical Biology 15(1) (2020)
3-16
Extracellular polysaccharides and glycoproteins of pathogenic bacteria assist in adherence, autoaggregation, biofilm formation, and host immune system evasion. As a result, considerable research in the field of glycobiology is dedicated to study the composition and function of glycans associated with virulence, as well as the enzymes involved in their biosynthesis with the aim to identify novel antibiotic targets. Especially, insights into the enzyme mechanism, substrate binding, and transition-state structures are valuable as a starting point for rational inhibitor design. An intriguing aspect of enzymes that generate or process polysaccharides and glycoproteins is the level of processivity. The existence of enzymatic processivity reflects the need for regulation of the final glycan/glycoprotein length and structure, depending on the role they perform. In this Review, we describe the currently reported examples of various processive enzymes involved in polymerization and transfer of sugar moieties, predominantly in bacterial pathogens, with a focus on the biochemical methods, to showcase the importance of studying processivity for understanding the mechanism.
processivity, Apparent processivity, Distributivity, Hyperglycosylation, Intrinsic processivity, Semiprocessive
NCBI PubMed ID: 31750644Publication DOI: 10.1021/acschembio.9b00619Journal NLM ID: 101282906Publisher: Washington, DC: American Chemical Society
Correspondence: m.t.c.walvoort

rug.nl
Institutions: Stratingh Institute for Chemistry, University of Groningen, 9747 AG Groningen, The Netherlands
The publication contains the following compound(s):
- Compound ID: 15035
Structure type: polymer chemical repeating unit
; 50000-1150000
Compound class: CPS
Reference(s) to other database(s): GTC:G48944PP
- Compound ID: 15034
|
D-Ala-(?-?)-D-Ala-(?-?)-mPmN2-(?-?)-D-Gln-(?-1)-L-Ala-(2-8)-+
|
-4)-b-D-GlcpNAc-(1-4)-b-Murp2Ac-(1- |
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Structure type: polymer chemical repeating unit
Trivial name: peptidoglycan
- Compound ID: 362
Structure type: polymer chemical repeating unit
Trivial name: D-galactan I, galactan I, galactan, D-galactan, microbial carbohydrate determinants, D-galactan-I
Compound class: CPS, EPS, O-polysaccharide, O-antigen, LPS, cell wall polysaccharide
Reference(s) to other database(s): GTC:G85324FU, GlycomeDB:
665
- Compound ID: 15037
Structure type: polymer chemical repeating unit
; n=20-40
Trivial name: galactan core of arabinogalactan
Reference(s) to other database(s): GTC:G27434VY
- Compound ID: 844
Structure type: homopolymer
Trivial name: colominic acid sodium salt, colominic acid, type B polysaccharide, polysialic acid, PSA, oligosaccharide repeating unit, α-2,8-linked polysialic acid
Compound class: CPS, O-polysaccharide, K-antigen, O-antigen
Reference(s) to other database(s): GTC:G30588ZL, GlycomeDB:
677
- Compound ID: 2696
Structure type: homopolymer
Trivial name: type C polysaccharide, polysialic acid, oligosaccharide repeating unit, α-2,9-linked polysialic acid
Compound class: CPS, O-polysaccharide, K-antigen, O-antigen
Reference(s) to other database(s): GTC:G63508TX, GlycomeDB:
25933
- Compound ID: 2692
Structure type: homopolymer
Trivial name: oligosaccharide repeating unit, repeating unit of capsular polysaccharide
Compound class: CPS, O-polysaccharide, O-antigen
Reference(s) to other database(s): GTC:G20238HN, GlycomeDB:
25952
- Compound ID: 15033
|
a-D-GlcpNAc-(1-4)-+
|
b-D-GlcpNAc-(1-4)-+ |
| |
-5)-D-Rib-ol-(1--P--5)--D-Rib-ol-(1-P- |
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Structure type: polymer chemical repeating unit
; n=40-60
Compound class: teichoic acid
Reference(s) to other database(s): GTC:G01544MV
- Compound ID: 15036
Structure type: homopolymer
Compound class: CPS
Reference(s) to other database(s): GTC:G78236EJ
- Compound ID: 945
Structure type: polymer chemical repeating unit
Compound class: CPS, O-polysaccharide, K-antigen, O-antigen
Reference(s) to other database(s): GTC:G50850EQ, GlycomeDB:
25314
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