Found
1
organism. Displayed organism
1
Expand all organisms
Collapse all organisms
Show all as text (SweetDB notation)
Show all graphically (SNFG notation)
1.
(
Organism ID:
6060)
Bacteroides
vulgatus
(
NCBI TaxID 821
,
species name lookup
)
Later renamed to:
Phocaeicola vulgatus
Taxonomic group:
bacteria
Phylum:
Bacteroidetes
The following compound(s) are assigned to this organism:
Compound ID:
2349
-4)-a-L-Rhap-(1-3)-b-D-Manp-(1-
Show graphically
Show legend
Show as text
Structure type:
polymer chemical repeating unit
Trivial name:
the polysaccharide moiety of LPS
Compound class:
O-polysaccharide
Reference(s) to other database(s):
GTC:G83677XQ, GlycomeDB:
25888
BOOK: Bacterial lipopolysaccharides: Structure, chemical synthesis, biogenesis and interaction with host cells; Eds.: Knirel YA, Valvano MA; Springer
2011, "Structure of O-antigens"
CSDB ID 27826
(all data & tools)
Compound ID:
15056
b-D-Manp-(1-4)-{{{-a-L-Rhap-(1-3)-b-D-Manp-(1-4)-}}}/n=0-63/-L-Rhap
Show graphically
Show legend
Show as text
Structure type:
oligomer
Compound class:
O-antigen
Nature Communications
2020, "Chemical synthesis of glycans up to a 128-mer relevant to the O-antigen of Bacteroides vulgatus"
CSDB ID 32245
(all data & tools)
Compound ID:
14489
3HOiMar-(1-2)-+ | iC15-(1-3)-3HOiMar-(1-2)-+ | | | b-D-Galf-(1-3)-+ | | | | | a-L-Fucp-(1-2)-+ | P-4)-+ | | | | | | | {{{-a-L-Rhap-(1-3)-b-D-Manp-(1-4)-}}}a-L-Rhap-(1-3)-b-D-Glcp-(1-6)-b-D-Galp-(1-4)-a-L-Rhap-(1-5)-a-Kdop-(2-6)-b-D-GlcpN-(1-6)-a-D-GlcpN-(1-P | | ?%3HOPam-(1-3)-+ 3HOPam-(1-3)-+
Show graphically
Show legend
Show as text
Structure type:
oligomer
Compound class:
LPS
Current Opinion in Structural Biology
2021, "Solving the structural puzzle of bacterial glycome"
CSDB ID 10904
(all data & tools)
Compound ID:
16103
3HOiMar-(1-2)-+ | 3HOPam-(1-3)-+ | | | iC15-(1-3)-3HOiMar-(1-2)-b-D-GlcpN-(1-6)-a-D-GlcpN-(1-P | 3HOPam-(1-3)-+
Show graphically
Show legend
Show as text
Structure type:
oligomer
Compound class:
lipid A
Pharmacology and Therapeutics
2022, "Lipopolysaccharide lipid A: A promising molecule for new immunity-based therapies and antibiotics"
CSDB ID 20947
(all data & tools)
International Journal of Molecular Sciences
2023, "Heterogeneity of Lipopolysaccharide as Source of Variability in Bioassays and LPS-Binding Proteins as Remedy"
CSDB ID 22389
(all data & tools)
Compound ID:
16285
3HOPam-(1-3)-+ 3HOMar-(1-2)-+ | | iC15-(1-3)-3HOiMar-(1-2)-b-D-GlcpN-(1-6)-a-D-GlcpN-(1-P | 3HOPam-(1-3)-+
Show graphically
Show legend
Show as text
Structure type:
oligomer
Compound class:
lipid A
Atherosclerosis
2022, "Structural differences in bacterial lipopolysaccharides determine atherosclerotic plaque progression by regulating the accumulation of neutrophils"
CSDB ID 9193
(all data & tools)
Compound ID:
16286
3HOMar-(1-2)-+ | iC15-(1-3)-3HOiMar-(1-2)-b-D-GlcpN-(1-6)-a-D-GlcpN-(1-P | 3HOPam-(1-3)-+
Show graphically
Show legend
Show as text
Structure type:
oligomer
Compound class:
lipid A
Atherosclerosis
2022, "Structural differences in bacterial lipopolysaccharides determine atherosclerotic plaque progression by regulating the accumulation of neutrophils"
CSDB ID 9194
(all data & tools)
Expand this organism
Collapse this organism
Resort organisms by:
publication year
journal name
microorganism
structure type
New query
Export IDs
Home
Help
Total list of
organism IDs
on all result pages of the current query:
Total list of corresponding CSDB IDs (permanent
record IDs
):
Execution: <1 sec
Found 