1. (CSDB ID: 659) | ![]() |
b-D-GlcpNAc-(1-4)-D-GlcpA | Show graphically |
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Streptococcus zooepidemicus ATCC 39920 (S-2)
(Ancestor NCBI TaxID 1301,
species name lookup)
Streptococcus zooepidemicus ATCC 39920 (S-3)
(Ancestor NCBI TaxID 1301,
species name lookup)
Polysaccharide peptides (or protein-bound polysaccharides, PSPs) are commonly found in mushrooms and plants and possess important nutritional properties and health benefits. The pathogenic bacterium Streptococcus zooepidemicus does not inherently produce PSPs but secretes the capsular polysaccharide hyaluronan. However, in a previous investigation of the catalytic mechanism of UDP-glucose dehydrogenase (UGDH), a PSP of peptide-bound hyaluronan was found to be produced by S. zooepidemicus through the in vivo expression of a mutant of the gene encoding UGDH. In the present study, this hyaluronan-derived PSP was structurally characterized by FT-IR, NMR, and high-performance liquid chromatography-mass spectrometry (HPLC-MS), and the data confirmed that the polysaccharide backbone, hyaluronan, is covalently bound to the side-chain peptides via an amide linkage. More importantly, the bacterial production of a PSP via this genetic modification method should inspire further research on the in vitro enzymatic synthesis of PSPs or even naturally occurring polysaccharide derivatives and may provide a theoretical foundation for investigating the in vivo synthetic mechanism of PSPs.
synthesis, Hyaluronan (HA), Polysaccharide peptide (PSP), Streptococcus zooepidemicus, UDP-Glucose dehydrogenase
Structure type: oligomer
2. (CSDB ID: 660) | ![]() |
Subst-(1-6)-+ | b-D-GlcpNAc-(1-4)-D-GlcpA Subst = peptide | Show graphically |
Show legend Show as text |
Streptococcus zooepidemicus ATCC 39920 (S-3)
(Ancestor NCBI TaxID 1301,
species name lookup)
Polysaccharide peptides (or protein-bound polysaccharides, PSPs) are commonly found in mushrooms and plants and possess important nutritional properties and health benefits. The pathogenic bacterium Streptococcus zooepidemicus does not inherently produce PSPs but secretes the capsular polysaccharide hyaluronan. However, in a previous investigation of the catalytic mechanism of UDP-glucose dehydrogenase (UGDH), a PSP of peptide-bound hyaluronan was found to be produced by S. zooepidemicus through the in vivo expression of a mutant of the gene encoding UGDH. In the present study, this hyaluronan-derived PSP was structurally characterized by FT-IR, NMR, and high-performance liquid chromatography-mass spectrometry (HPLC-MS), and the data confirmed that the polysaccharide backbone, hyaluronan, is covalently bound to the side-chain peptides via an amide linkage. More importantly, the bacterial production of a PSP via this genetic modification method should inspire further research on the in vitro enzymatic synthesis of PSPs or even naturally occurring polysaccharide derivatives and may provide a theoretical foundation for investigating the in vivo synthetic mechanism of PSPs.
synthesis, Hyaluronan (HA), Polysaccharide peptide (PSP), Streptococcus zooepidemicus, UDP-Glucose dehydrogenase
Structure type: oligomer
3. (CSDB ID: 986) | ![]() |
Subst-(1-6)-+ | -4)-b-D-GlcpA-(1-3)-b-D-GlcpNAc-(1-4)-b-D-GlcpA-(1-3)-b-D-GlcpN-(1- Subst = peptide | Show graphically |
Show legend Show as text |
Streptococcus zooepidemicus ATCC 39920 (S-3)
(Ancestor NCBI TaxID 1301,
species name lookup)
Polysaccharide peptides (or protein-bound polysaccharides, PSPs) are commonly found in mushrooms and plants and possess important nutritional properties and health benefits. The pathogenic bacterium Streptococcus zooepidemicus does not inherently produce PSPs but secretes the capsular polysaccharide hyaluronan. However, in a previous investigation of the catalytic mechanism of UDP-glucose dehydrogenase (UGDH), a PSP of peptide-bound hyaluronan was found to be produced by S. zooepidemicus through the in vivo expression of a mutant of the gene encoding UGDH. In the present study, this hyaluronan-derived PSP was structurally characterized by FT-IR, NMR, and high-performance liquid chromatography-mass spectrometry (HPLC-MS), and the data confirmed that the polysaccharide backbone, hyaluronan, is covalently bound to the side-chain peptides via an amide linkage. More importantly, the bacterial production of a PSP via this genetic modification method should inspire further research on the in vitro enzymatic synthesis of PSPs or even naturally occurring polysaccharide derivatives and may provide a theoretical foundation for investigating the in vivo synthetic mechanism of PSPs.
synthesis, Hyaluronan (HA), Polysaccharide peptide (PSP), Streptococcus zooepidemicus, UDP-Glucose dehydrogenase
Structure type: polymer chemical repeating unit
4. (CSDB ID: 20301) | ![]() |
b-D-GlcpNAc-(1-4)-D-GlcpA | Show graphically |
Show legend Show as text |
Escherichia coli
(NCBI TaxID 562,
species name lookup)
The glycosaminoglycan hyaluronan is involved in a diverse range of physiological and diseases processes and comprises repeated disaccharide units of N-acetyl-d-glucosamine (GlcNAc) and d-glucuronic acid (GlcA). A molecular description of the solution conformation of HA is required to account for this biology, which is best attained using nuclear magnetic resonance (NMR). NMR studies of the polymer, however, are frustrated by resonance overlap arising from the highly degenerate structure. In contrast, end-effects in oligosaccharides can produce some chemical shift dispersion, giving the possibility that their conformational properties can be measured and extrapolated to models of the polymer. We report the complete resolution and assignment of (1)H, (13)C and (15)N nuclei in hyaluronan oligosaccharides with seven different naturally occurring terminal rings. At 900MHz, all (1)H nuclei in the hexasaccharide GlcA-β-(1→3)-GlcNAc-β-(1→4)-GlcA-β-(1→3)-GlcNAc-β-(1→4)-GlcA-β-(1→3)-GlcNAc-OH were uniquely resolved and the two central rings were found to be a good model for the polymer environment. These assignments now allow resolved, unambiguous structural restraints to be acquired on this oligosaccharide and extrapolated to models for the solution conformation of the polymer.
coupling constant, resolution, hyaluronan, strong coupling, end-effect
Structure type: oligomer13C NMR data: Linkage Residue C1 C2 C3 C4 C5 C6 4,2 Ac ? 25.232 4 bDGlcpN 103.380 58.212 76.811 72.582 78.662 63.410 ?DGlcpA 1H NMR data: Linkage Residue H1 H2 H3 H4 H5 H6 4,2 Ac - 2.043 4 bDGlcpN 4.522 3.699 3.520 3.459 3.460 3.763-3.926 ?DGlcpA 1H/13C HSQC data: Linkage Residue C1/H1 C2/H2 C3/H3 C4/H4 C5/H5 C6/H6 4,2 Ac 25.232/2.043 4 bDGlcpN 103.380/4.522 58.212/3.699 76.811/3.520 72.582/3.459 78.662/3.460 63.410/3.763-3.926 ?DGlcpA
1H NMR data:
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13C NMR data:
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The spectrum also has 1 signal at unknown position (not plotted). |
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