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1.
(
Organism ID:
6766)
Escherichia
coli
O39
(
Ancestor NCBI TaxID 562
,
species name lookup
)
Taxonomic group:
bacteria
Phylum:
Proteobacteria
The following compound(s) are assigned to this organism:
Compound ID:
11745
a-D-Galp-(1-3)-+ | R-3HOBut-(1-4)-+ | | | -3)-b-D-Quip4N-(1-2)-a-D-Manp-(1-4)-a-L-Rhap-(1-3)-a-D-GlcpNAc-(1-
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Structure type:
polymer chemical repeating unit
Compound class:
O-polysaccharide, O-antigen
Carbohydrate Research
2014, "Structure elucidation and gene cluster annotation of the O-antigen of Escherichia coli O39; application of anhydrous trifluoroacetic acid for selective cleavage of glycosidic linkages"
CSDB ID 30116
(all data & tools)
Russian Chemical Reviews = Uspekhi Khimii
2019, "Chemical methods for selective cleavage of glycosidic linkages in structural analysis of bacterial polysaccharides"
CSDB ID 1383
(all data & tools)
International Journal of Biological Macromolecules
2019, "Structure and gene cluster of the O antigen of Escherichia coli F17, a candidate for a new O-serogroup"
CSDB ID 1482
(all data & tools)
FEMS Microbiology Reviews
2020, "Structure and genetics of Escherichia coli O antigens"
CSDB ID 1546
(all data & tools)
Molecular Immunology
2020, "Specificity of human natural antibodies referred to as anti-Tn"
CSDB ID 3838
(all data & tools)
Compound ID:
11746
a-D-Galp-(1-3)-+ | R-3HOBut-(1-4)-+ | | | a-D-GlcpNAc-(1-3)-b-D-Quip4N-(1-2)-a-D-Manp-(1-4)-b-L-Rhap
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Structure type:
oligomer
Compound class:
O-polysaccharide
Carbohydrate Research
2014, "Structure elucidation and gene cluster annotation of the O-antigen of Escherichia coli O39; application of anhydrous trifluoroacetic acid for selective cleavage of glycosidic linkages"
CSDB ID 30425
(all data & tools)
Compound ID:
11747
a-D-Galp-(1-3)-+ | R-3HOBut-(1-4)-+ | | | a-D-GlcpNAc-(1-3)-b-D-Quip4N-(1-2)-a-D-Manp-(1-4)-a-L-Rhap
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Structure type:
oligomer
Compound class:
O-polysaccharide
Carbohydrate Research
2014, "Structure elucidation and gene cluster annotation of the O-antigen of Escherichia coli O39; application of anhydrous trifluoroacetic acid for selective cleavage of glycosidic linkages"
CSDB ID 30426
(all data & tools)
Compound ID:
11748
R-3HOBut-(1-4)-+ | a-D-GlcpNAc-(1-3)-b-D-Quip4N-(1-2)-a-D-Manp-(1-3)-1dEry-ol 1dEry-ol = 1-deoxyerythritol
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Structure type:
oligomer
Compound class:
O-polysaccharide
Carbohydrate Research
2014, "Structure elucidation and gene cluster annotation of the O-antigen of Escherichia coli O39; application of anhydrous trifluoroacetic acid for selective cleavage of glycosidic linkages"
CSDB ID 30427
(all data & tools)
Russian Chemical Reviews = Uspekhi Khimii
2019, "Chemical methods for selective cleavage of glycosidic linkages in structural analysis of bacterial polysaccharides"
CSDB ID 1384
(all data & tools)
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