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Found 1 organism. Displayed organism 1
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1. (Organism ID: 71)

Burkholderia pseudomallei

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(NCBI TaxID 28450, species name lookup)

Previously named: Pseudomonas pseudomallei
Taxonomic group: bacteria
Phylum: Proteobacteria

The following compound(s) are assigned to this organism:

Compound ID: 136

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Structure type: polymer chemical repeating unit
Compound class: O-polysaccharide, O-antigen
Reference(s) to other database(s): GTC:G09530VW

Journal of Bacteriology 2002, "Molecular and physical characterization of Burkholderia mallei O antigens"
CSDB ID 1673 (all data & tools)
Compound ID: 138

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Structure type: polymer chemical repeating unit
Compound class: O-polysaccharide, O-antigen
Reference(s) to other database(s): GTC:G09618YZ

Journal of Bacteriology 2002, "Molecular and physical characterization of Burkholderia mallei O antigens"
CSDB ID 1810 (all data & tools)
Compound ID: 906

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Structure type: homopolymer
Trivial name: 6-deoxy-heptan CPS
Compound class: CPS, O-polysaccharide, O-antigen
Reference(s) to other database(s): GTC:G09650IH, GlycomeDB:3383

Infection and Immunity 1997, "Specificity and functional activity of anti-Burkholderia pseudomallei polysaccharide antibodies"
CSDB ID 7121 (all data & tools)

Microbial Pathogenesis 2001, "Identification of a Burkholderia mallei polysaccharide gene cluster by subtractive hybridization and demonstration that the encoded capsule is an essential virulence determinant"
CSDB ID 6576 (all data & tools)

Molecular Microbiology 1998, "The type II O-antigenic polysaccharide moiety of Burkholderia pseudomallei lipopolysaccharide is required for serum resistance and virulence"
CSDB ID 6577 (all data & tools)

Infection and Immunity 2005, "The capsular polysaccharide of Burkholderia pseudomallei contributes to survival in serum by reducing complement factor C3b deposition"
CSDB ID 10328 (all data & tools)

Carbohydrate Research 2008, "Application of carbohydrate microarray technology for the detection of Burkholderia pseudomallei, Bacillus anthracis and Francisella tularensis antibodies"
CSDB ID 23409 (all data & tools)

Journal of Carbohydrate Chemistry 2008, "Application of polysaccharide microarray technology for the serodiagnosis of Burkholderia pseudomallei infection (melioidosis) in humans"
CSDB ID 23539 (all data & tools)

Biochemistry (Moscow) 2011, "Changes in the repertoire of natural antibodies caused by immunization with bacterial antigens"
CSDB ID 26469 (all data & tools)

Frontiers in Cellular and Infection Microbiology 2012, "Development of capsular polysaccharide-based glycoconjugates for immunization against melioidosis and glanders"
CSDB ID 27126 (all data & tools)

Journal of Organic Chemistry 2014, "Intramolecular aglycon delivery enables the synthesis of 6-deoxy-b-D-manno-heptosides as fragments of Burkholderia pseudomallei and Burkholderia mallei capsular polysaccharide"
CSDB ID 30142 (all data & tools)

ACS Chemical Biology 2015, "Burkholderia pseudomallei Capsular Polysaccharide Recognition by a Monoclonal Antibody Reveals Key Details toward a Biodefense Vaccine and Diagnostics against Melioidosis"
CSDB ID 11048 (all data & tools)

Natural Product Reports 2018, "Polysaccharides from Burkholderia species as targets for vaccine development, immunomodulation and chemical synthesis"
CSDB ID 12887 (all data & tools)

FEMS Microbiology Reviews 2018, "Potential targets for next generation anti-microbial glycoconjugate vaccines"
CSDB ID 12685 (all data & tools)
Compound ID: 982

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Structure type: polymer chemical repeating unit
Compound class: O-polysaccharide

Infection and Immunity 1997, "Specificity and functional activity of anti-Burkholderia pseudomallei polysaccharide antibodies"
CSDB ID 7234 (all data & tools)
Compound ID: 2405

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Structure type: polymer chemical repeating unit
Compound class: O-polysaccharide
Reference(s) to other database(s): GTC:G68057FS

FEMS Microbiology Reviews 2001, "Separation of 6-deoxy-heptane from a smooth-type lipopolysaccharide preparation of Burkholderia pseudomallei"
CSDB ID 2529 (all data & tools)
Compound ID: 2443

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Structure type: polymer chemical repeating unit
Compound class: O-polysaccharide, O-antigen
Reference(s) to other database(s): GTC:G77379TW, GlycomeDB:25444

FEMS Microbiology Reviews 2001, "Separation of 6-deoxy-heptane from a smooth-type lipopolysaccharide preparation of Burkholderia pseudomallei"
CSDB ID 2577 (all data & tools)

Biochemistry (Moscow) 2011, "Changes in the repertoire of natural antibodies caused by immunization with bacterial antigens"
CSDB ID 26468 (all data & tools)
Compound ID: 2243

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Structure type: polymer chemical repeating unit
Trivial name: K-antigen, galactan-Kdo, Kdo-EPS
Compound class: CPS, EPS
Reference(s) to other database(s): GTC:G77110LE, GlycomeDB:25312

European Journal of Biochemistry 1997, "Structure of an acidic exopolysaccharide of Burkholderia pseudomallei"
CSDB ID 3773 (all data & tools)

Journal of Medical Microbiology 2010, "Characterization of the type III capsular polysaccharide produced by Burkholderia pseudomallei"
CSDB ID 25406 (all data & tools)

Biochemistry (Moscow) 2011, "Changes in the repertoire of natural antibodies caused by immunization with bacterial antigens"
CSDB ID 26470 (all data & tools)

Carbohydrate Research 2014, "Structural characterization of polysaccharides expressed by Burkholderia oklahomensis E0147"
CSDB ID 30137 (all data & tools)

Natural Product Reports 2018, "Polysaccharides from Burkholderia species as targets for vaccine development, immunomodulation and chemical synthesis"
CSDB ID 12475 (all data & tools)

BOOK: Comprehensive Glycoscience: From Chemistry to Systems Biology. Reference Module in Chemistry, Molecular Sciences and Chemical Engineering; Eds.: Barchi J, Kamerling H; Elsevier 2021, "Bacterial exopolysaccharides"
CSDB ID 6982 (all data & tools)
Compound ID: 2765

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Structure type: polymer chemical repeating unit
Compound class: CPS, EPS
Reference(s) to other database(s): GTC:G98903ZV, GlycomeDB:26055

European Journal of Biochemistry 1997, "Structure of an acidic exopolysaccharide of Burkholderia pseudomallei"
CSDB ID 3859 (all data & tools)
Compound ID: 2974

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Structure type: oligomer
Reference(s) to other database(s): GTC:G95696PF, GlycomeDB:37710

European Journal of Biochemistry 1997, "Structure of an acidic exopolysaccharide of Burkholderia pseudomallei"
CSDB ID 3860 (all data & tools)
Compound ID: 3731

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Structure type: polymer chemical repeating unit
Compound class: O-polysaccharide, O-antigen
Reference(s) to other database(s): GTC:G00784ZG, GlycomeDB:3464

Molecular Microbiology 1998, "The type II O-antigenic polysaccharide moiety of Burkholderia pseudomallei lipopolysaccharide is required for serum resistance and virulence"
CSDB ID 6604 (all data & tools)

Journal of Carbohydrate Chemistry 2008, "Application of polysaccharide microarray technology for the serodiagnosis of Burkholderia pseudomallei infection (melioidosis) in humans"
CSDB ID 23437 (all data & tools)

Biochemistry (Moscow) 2011, "Changes in the repertoire of natural antibodies caused by immunization with bacterial antigens"
CSDB ID 26466 (all data & tools)
Compound ID: 4198

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Structure type: polymer chemical repeating unit
Compound class: O-polysaccharide, O-antigen
Reference(s) to other database(s): GTC:G03850AE, GlycomeDB:3383

Infection and Immunity 2005, "The capsular polysaccharide of Burkholderia pseudomallei contributes to survival in serum by reducing complement factor C3b deposition"
CSDB ID 10133 (all data & tools)

Biochemistry (Moscow) 2011, "Changes in the repertoire of natural antibodies caused by immunization with bacterial antigens"
CSDB ID 26467 (all data & tools)

Journal of Pharmaceutical and Biomedical Analysis 2021, "Structural characterization of a novel pentasaccharide repeating unit from Burkholderia pseudomallei strain BPC006 and its role in diagnosis and immunogenicity"
CSDB ID 10446 (all data & tools)
Compound ID: 4319

P-7)-D-gro-D-manHep Show graphically

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Structure type: monomer
Trivial name: D-glycero-D-manno-heptose-7-phosphate
Reference(s) to other database(s): GTC:G37889CH, GlycomeDB:27767

Carbohydrate Research 2005, "A short synthesis of D-glycero-D-manno-heptose 7-phosphate"
CSDB ID 10551 (all data & tools)
Compound ID: 8181

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Structure type: polymer chemical repeating unit
Compound class: O-polysaccharide
Reference(s) to other database(s): GTC:G91228GE

Carbohydrate Research 2008, "Application of carbohydrate microarray technology for the detection of Burkholderia pseudomallei, Bacillus anthracis and Francisella tularensis antibodies"
CSDB ID 23462 (all data & tools)
Compound ID: 8182

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Structure type: polymer chemical repeating unit
Compound class: O-polysaccharide
Reference(s) to other database(s): GTC:G54867WL

Carbohydrate Research 2008, "Application of carbohydrate microarray technology for the detection of Burkholderia pseudomallei, Bacillus anthracis and Francisella tularensis antibodies"
CSDB ID 23463 (all data & tools)
Compound ID: 8183

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Structure type: oligomer
Aglycon: CH2CH2CH2CH2CH2CONHCH2CH2NH2
Trivial name: anthrose = 4,6-dideoxy-4-(3-hydroxy-3-methylbutamido)-2-O-methyl-D-glucopyranoside
Reference(s) to other database(s): GlycomeDB:27817

Carbohydrate Research 2008, "Application of carbohydrate microarray technology for the detection of Burkholderia pseudomallei, Bacillus anthracis and Francisella tularensis antibodies"
CSDB ID 23464 (all data & tools)
Compound ID: 8184

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Structure type: oligomer
Aglycon: CH2CH2CH2CH2CH2CONHCH2CH2NH2
Trivial name: anthrose tetrasaccharide
Reference(s) to other database(s): GlycomeDB:37212

Carbohydrate Research 2008, "Application of carbohydrate microarray technology for the detection of Burkholderia pseudomallei, Bacillus anthracis and Francisella tularensis antibodies"
CSDB ID 23465 (all data & tools)
Compound ID: 11846

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Structure type: oligomer ; 540.2649 [M+H]+
C23H42NO13
Aglycon: 5-amino-1-pentyl
Compound class: CPS
Reference(s) to other database(s): GTC:G70521VU

Journal of Organic Chemistry 2014, "Intramolecular aglycon delivery enables the synthesis of 6-deoxy-b-D-manno-heptosides as fragments of Burkholderia pseudomallei and Burkholderia mallei capsular polysaccharide"
CSDB ID 30518 (all data & tools)
Compound ID: 11847

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Structure type: oligomer ; 540.2649 [M+H]+
C23H42NO13
Aglycon: 5-amino-1-pentyl
Compound class: CPS
Reference(s) to other database(s): GTC:G45327RS

Journal of Organic Chemistry 2014, "Intramolecular aglycon delivery enables the synthesis of 6-deoxy-b-D-manno-heptosides as fragments of Burkholderia pseudomallei and Burkholderia mallei capsular polysaccharide"
CSDB ID 30519 (all data & tools)
Compound ID: 3263

-3)-a-D-Manp-(1- Show graphically

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Structure type: homopolymer
Compound class: CPS, O-polysaccharide, mannan
Reference(s) to other database(s): GTC:G44405PH, GlycomeDB:26469

Natural Product Reports 2018, "Polysaccharides from Burkholderia species as targets for vaccine development, immunomodulation and chemical synthesis"
CSDB ID 12471 (all data & tools)

Compound ID: 12951

Compound 12951

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Compound ID: 12954

Compound 12954

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Compound ID: 13095

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Structure type: polymer chemical repeating unit
Compound class: O-polysaccharide, O-antigen

FEMS Microbiology Reviews 2018, "Potential targets for next generation anti-microbial glycoconjugate vaccines"
CSDB ID 12686 (all data & tools)

Compound ID: 13145

Compound 13145

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Compound ID: 6351

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Structure type: oligomer
Trivial name: rhamnolipid, rhamnolipid B
Compound class: glycolipid, rhamnolipid

Applied Microbiology and Biotechnology 2019, "Microbial biosurfactants for oil spill remediation: pitfalls and potentials"
CSDB ID 49780 (all data & tools)
Compound ID: 15937

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Structure type: homopolymer ; n=1-4
Aglycon: spacer-CRM197 protein
Compound class: CPS, glycoconjugate

Biochemical Society Transactions 2021, "Semi- and fully synthetic carbohydrate vaccines against pathogenic bacteria: recent developments"
CSDB ID 10440 (all data & tools)
Compound ID: 15938

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Structure type: oligomer
Aglycon: (1->1) 5-aminopentyl
Compound class: O-polysaccharide

Biochemical Society Transactions 2021, "Semi- and fully synthetic carbohydrate vaccines against pathogenic bacteria: recent developments"
CSDB ID 10441 (all data & tools)
Compound ID: 16140

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Structure type: polymer chemical repeating unit
Trivial name: type A OPS
Compound class: O-polysaccharide, O-antigen

International Journal of Biological Macromolecules 2023, "Characterization of Burkholderia pseudomallei O antigens in different clinical strains"
CSDB ID 8477 (all data & tools)

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