Taxonomic group: bacteria / Proteobacteria
(Phylum: Proteobacteria)
The structure was elucidated in this paperPublication DOI: 10.1016/j.carres.2018.10.009Journal NLM ID: 0043535Publisher: Elsevier
Correspondence: C. Gauthier <charles.gauthier

iaf.inrs.ca>; E. Déziel <eric.deziel

iaf.inrs.ca>
Institutions: INRS - Institut Armand-Frappier, Université du Québec, 531, boul. des Prairies, Laval, Québec, H7V 1B7, Canada, Institut des Sciences de la Forêt Tempérée, Université du Québec en Outaouais, 58, rue Principale, Ripon, Québec, J0V 1V0, Canada
The bacterium Pantoea ananatis was reported to produce glycolipid biosurfactants of unknown structures. Herein, we present the isolation and structural determination of ananatoside A, the main congener of a new family of 15-membered macrodilactone-containing glucolipids. The structure of ananatoside A was elucidated via chemical degradation and spectroscopic methods including 1D/2D NMR analysis, tandem MS/MS, GC-MS, HR-ESI-TOF-MS, MALDI-TOF-MS, and polarimetry. Computational methods were used to predict the most abundant conformers of ananatoside A.
glycolipid, NMR analysis, Pantoea ananatis, biosurfactant, Macrolactone
Structure type: cyclic polymer repeating unit ; 525.2 [M+Na]+
C
26H
46O
9Location inside paper: p.15, table 1, fig.4, ananatoside A (1)
Trivial name: ananatoside A
Compound class: glycolipid
Contained glycoepitopes: IEDB_142488,IEDB_146664,IEDB_983931,SB_192
Methods: 13C NMR, 1H NMR, NMR-2D, GC-MS, TLC, acid hydrolysis, MS/MS, chemical methods, MALDI-TOF MS, HPLC, optical rotation measurement, computational methods, HPLC-MS, HR-ESI-MALDI-TOF MS
Comments, role: proposed structure of ananatoside A (1); NMR temperature was not specified
3D data: molecular modeling
Related record ID(s): 1012
NCBI Taxonomy refs (TaxIDs): 1332074
Show glycosyltransferases
NMR conditions: in DMSO-d6 / C5D5N
[as TSV]
13C NMR data:
Linkage Residue C1 C2 C3 C4 C5 C6 C7 C8 C9 C10
3,3 bDGlcp 106.22 75.61 78.73 72.79 74.96 65.79
3 lR3HODco 172.13 42.32 78.43 37.33 26.25 29.86-30.10 29.86-30.10 32.35 23.22 14.58
lR3HODco 170.41 41.43 70.33 35.60 25.94 29.72-29.97 29.72-29.97 32.31 23.22 14.58
1H NMR data:
Linkage Residue H1 H2 H3 H4 H5 H6 H7 H8 H9 H10
3,3 bDGlcp 5.11 3.95 4.16 3.83 4.11 4.80-5.02
3 lR3HODco - 2.72-3.02 4.65 1.49-1.72 1.60 1.13-1.17 1.13-1.17 1.13 1.18 0.82
lR3HODco - 2.79-2.86 5.89 1.53-1.60 1.33 1.19-1.23 1.19-1.23 1.18 1.23 0.85
1H/13C HSQC data:
Linkage Residue C1/H1 C2/H2 C3/H3 C4/H4 C5/H5 C6/H6 C7/H7 C8/H8 C9/H9 C10/H10
3,3 bDGlcp 106.22/5.11 75.61/3.95 78.73/4.16 72.79/3.83 74.96/4.11 65.79/4.80-5.02
3 lR3HODco 42.32/2.72-3.02 78.43/4.65 37.33/1.49-1.72 26.25/1.60 29.86-30.10/1.13-1.17 29.86-30.10/1.13-1.17 32.35/1.13 23.22/1.18 14.58/0.82
lR3HODco 41.43/2.79-2.86 70.33/5.89 35.60/1.53-1.60 25.94/1.33 29.72-29.97/1.19-1.23 29.72-29.97/1.19-1.23 32.31/1.18 23.22/1.23 14.58/0.85
1H NMR data:
Linkage | Residue | H1 | H2 | H3 | H4 | H5 | H6 | H7 | H8 | H9 | H10 |
3,3 | bDGlcp | 5.11 | 3.95 | 4.16 | 3.83 | 4.11 | 4.80 5.02 | |
3 | lR3HODco |
| 2.72 3.02 | 4.65 | 1.49 1.72 | 1.60 | 1.13 1.17 | 1.13 1.17 | 1.13 | 1.18 | 0.82 |
| lR3HODco |
| 2.79 2.86 | 5.89 | 1.53 1.60 | 1.33 | 1.19 1.23 | 1.19 1.23 | 1.18 | 1.23 | 0.85 |
|
13C NMR data:
Linkage | Residue | C1 | C2 | C3 | C4 | C5 | C6 | C7 | C8 | C9 | C10 |
3,3 | bDGlcp | 106.22 | 75.61 | 78.73 | 72.79 | 74.96 | 65.79 | |
3 | lR3HODco | 172.13 | 42.32 | 78.43 | 37.33 | 26.25 | 29.86 30.10 | 29.86 30.10 | 32.35 | 23.22 | 14.58 |
| lR3HODco | 170.41 | 41.43 | 70.33 | 35.60 | 25.94 | 29.72 29.97 | 29.72 29.97 | 32.31 | 23.22 | 14.58 |
|
There is only one chemically distinct structure:
Taxonomic group: bacteria / Proteobacteria
(Phylum: Proteobacteria)
Publication DOI: 10.1016/j.carres.2018.10.009Journal NLM ID: 0043535Publisher: Elsevier
Correspondence: C. Gauthier <charles.gauthier

iaf.inrs.ca>; E. Déziel <eric.deziel

iaf.inrs.ca>
Institutions: INRS - Institut Armand-Frappier, Université du Québec, 531, boul. des Prairies, Laval, Québec, H7V 1B7, Canada, Institut des Sciences de la Forêt Tempérée, Université du Québec en Outaouais, 58, rue Principale, Ripon, Québec, J0V 1V0, Canada
The bacterium Pantoea ananatis was reported to produce glycolipid biosurfactants of unknown structures. Herein, we present the isolation and structural determination of ananatoside A, the main congener of a new family of 15-membered macrodilactone-containing glucolipids. The structure of ananatoside A was elucidated via chemical degradation and spectroscopic methods including 1D/2D NMR analysis, tandem MS/MS, GC-MS, HR-ESI-TOF-MS, MALDI-TOF-MS, and polarimetry. Computational methods were used to predict the most abundant conformers of ananatoside A.
glycolipid, NMR analysis, Pantoea ananatis, biosurfactant, Macrolactone
Structure type: monomer ; 519.3171 [M-H]-
C
26H
48O
10Location inside paper: p.14, fig.1, glycolipid 1
Compound class: glycolipid
Contained glycoepitopes: IEDB_142488,IEDB_146664,IEDB_983931,SB_192
Methods: 13C NMR, 1H NMR, NMR-2D, GC-MS, TLC, acid hydrolysis, MS/MS, chemical methods, MALDI-TOF MS, HPLC, optical rotation measurement, computational methods, HPLC-MS, HR-ESI-MALDI-TOF MS
3D data: molecular modeling
Related record ID(s): 730
NCBI Taxonomy refs (TaxIDs): 553
Show glycosyltransferases
There is only one chemically distinct structure: