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1.
(
Organism ID:
765)
Escherichia
coli
O56
(
Ancestor NCBI TaxID 562
,
species name lookup
)
Taxonomic group:
bacteria
Phylum:
Proteobacteria
The following compound(s) are assigned to this organism:
Compound ID:
1259
a-D-Galp-(1-2)-+ | -7)-a-Neup5Ac-(2-3)-b-D-Glcp-(1-3)-b-D-GlcpNAc-(1-
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Structure type:
suggested polymer biological repeating unit
Compound class:
O-polysaccharide, O-antigen
Reference(s) to other database(s):
GTC:G32692RT, GlycomeDB:
6888
Carbohydrate Research
1995, "NMR reinvestigation of two N-acetylneuraminic acid-containing O-specific polysaccharides (O56 and O24) of Escherichia coli"
CSDB ID 8382
(all data & tools)
Biochemistry (Moscow)
1994, "The structure of lipopolysaccharides of gram-negative bacteria. III. The structure of O-antigens: A review"
CSDB ID 108697
(all data & tools)
Carbohydrate Research
1993, "Structure of the O56 antigen of Escherichia coli, a polysaccharide containing 7-substituted a-N-acetylneuraminic acid"
CSDB ID 117052
(all data & tools)
European Journal of Biochemistry
1994, "Structure of the Escherichia coli O24 and O56 O-specific sialic-acid-containing polysaccharides and linkage of these structures to the core region in lipopolysaccharides"
CSDB ID 124618
(all data & tools)
Current Microbiology
2006, "Characterization of E. coli O24 and O56 O Antigen Gene Clusters Reveals a Complex Evolutionary History of the O24 Gene Cluster"
CSDB ID 20438
(all data & tools)
FEMS Microbiology Reviews
2006, "The structures of Escherichia coli O-polysaccharide antigens"
CSDB ID 20659
(all data & tools)
Journal of Bacteriology
2008, "Characterization of two b-1,3-glucosyltransferases from Escherichia coli serotypes O56 and O152"
CSDB ID 22619
(all data & tools)
Biochemistry (Moscow)
2010, "Structural analysis of lipopolysaccharides from Gram-negative bacteria"
CSDB ID 25691
(all data & tools)
FEMS Microbiology Reviews
2020, "Structure and genetics of Escherichia coli O antigens"
CSDB ID 1563
(all data & tools)
Compound ID:
1261
b-D-Glcp-(1-3)-b-D-GlcpNAc-(1-7)-b-D-Sugp5Ac Sug = β-5-amino-3,5-dideoxy-D-galacto-octulosonic acid = SMILES N{5}[C@@H]1{4}[C@@H](O)C{2}[C@@](O)({1}C(=O)O)O{6}[C@H]1{7}[C@H](O){8}CO
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Structure type:
oligomer
Compound class:
O-polysaccharide
Reference(s) to other database(s):
GTC:G14407ME
Carbohydrate Research
1995, "NMR reinvestigation of two N-acetylneuraminic acid-containing O-specific polysaccharides (O56 and O24) of Escherichia coli"
CSDB ID 8412
(all data & tools)
Compound ID:
1262
b-D-Glcp-(1-3)-b-D-GlcpNAc-(1-7)-Subst5Ac-(2-3)-b-D-Glcp-(1-3)-b-D-GlcpNAc-(1-7)-b-D-Sugp5Ac Sug = β-5-amino-3,5-dideoxy-D-galacto-octulosonic acid = SMILES N{5}[C@@H]1{4}[C@@H](O)C{2}[C@@](O)({1}C(=O)O)O{6}[C@H]1{7}[C@H](O){8}CO; Subst = α-5-amino-3,5-dideoxy-D-galacto-octulosonic acid = SMILES N{5}[C@@H]1{4}[C@@H](O)C{2}[C@](O)({1}C(=O)O)O{6}[C@H]1{7}[C@H](O){8}CO
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Structure type:
oligomer
Reference(s) to other database(s):
GTC:G10613SF
Carbohydrate Research
1995, "NMR reinvestigation of two N-acetylneuraminic acid-containing O-specific polysaccharides (O56 and O24) of Escherichia coli"
CSDB ID 8413
(all data & tools)
Compound ID:
1263
a-D-Galp-(1-2)-b-D-Glcp-(1-3)-b-D-GlcpNAc-(1-7)-b-Neup5Ac
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Structure type:
oligomer
Reference(s) to other database(s):
GTC:G57584EE
Carbohydrate Research
1995, "NMR reinvestigation of two N-acetylneuraminic acid-containing O-specific polysaccharides (O56 and O24) of Escherichia coli"
CSDB ID 326
(all data & tools)
Compound ID:
1264
a-D-Galp-(1-2)-+ | a-D-Galp-(1-2)-b-D-Glcp-(1-3)-b-D-GlcpNAc-(1-7)-a-Neup5Ac-(2-3)-b-D-Glcp-(1-3)-b-D-GlcpNAc-(1-7)-b-Neup5Ac
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Structure type:
oligomer
Reference(s) to other database(s):
GTC:G01415HK
Carbohydrate Research
1995, "NMR reinvestigation of two N-acetylneuraminic acid-containing O-specific polysaccharides (O56 and O24) of Escherichia coli"
CSDB ID 327
(all data & tools)
Compound ID:
7713
b-D-Glcp-(1-3)-D-GlcpNAc-(1---P---P----/(CH2)11OPh/
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Structure type:
oligomer
Aglycon:
(CH2)11OPh
Trivial name:
disaccharide a-pyrophosphatephenylundecyl
Reference(s) to other database(s):
GlycomeDB:
37232
Journal of Bacteriology
2008, "Characterization of two b-1,3-glucosyltransferases from Escherichia coli serotypes O56 and O152"
CSDB ID 22851
(all data & tools)
Compound ID:
7711
a-D-GlcpNAc-(1---P---P----/(CH2)11OPh/
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Structure type:
monomer
Aglycon:
(CH2)11OPh
Trivial name:
GlcNAc-a-pyrophosphatephenylundecyl
Reference(s) to other database(s):
GlycomeDB:
1808
Journal of Bacteriology
2008, "Characterization of two b-1,3-glucosyltransferases from Escherichia coli serotypes O56 and O152"
CSDB ID 22852
(all data & tools)
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