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1. (Article ID: 8466)
Sandra K, Van Beeumen J, Stals I, Sandra P, Claeyssens M, Devreese B
Characterization of cellobiohydrolase I N-glycans and differentiation of their phosphorylated isomers by capillary electrophoresis−Q-trap mass spectrometry
Analytical Chemistry 76(19) (2004)
5878-5886
A capillary electrophoresis−mass spectrometric (CE−MS) method is described for the simultaneous analysis of uncharged and charged glycans. The glycans were labeled with the negatively charged tag 8-aminopyrene-1,3,6-trisulfonate by reductive amination and separated in an ammonium acetate buffer. A Q-Trap instrument was used for mass spectrometric detection. The CE−MS method was first optimized using maltooligosaccharides and ribonuclease B N-glycans and then applied to the characterization of enzymatically released N-glycans from the glycoprotein cellobiohydrolase I. The method, as developed, allowed differentiation of phosphorylated isomers and MS/MS provided useful structural information. Further structural evidence was obtained by studying the methylated glycans in off-line ESI-MS/MS experiments and by using a combination of chemical and enzymatic sequencing
glycans, cellobiohydrolase I, Q-Trap
NCBI PubMed ID: 15456310Publication DOI: 10.1021/ac0493976Journal NLM ID: 0370536Correspondence: bart.devreese

UGent.be
Institutions: Laboratory of Protein Biochemistry and Protein Engineering, Laboratory of Biochemistry, and Laboratory of Separation Science, Ghent University, Ghent, Belgium
Methods: methylation, ESI-MS, acid hydrolysis, enzymatic digestion, extraction, CE-MS, reduction, cell growth, precipitation, centrifugation, reductive amination, CE-LIFD
The publication contains the following compound(s):
- Compound ID: 21092
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a-D-Manp-(1-6)-+
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a-D-Manp-(1-3)-a-D-Manp-(1-6)-+
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a-D-Glcp-(1-3)-a-D-Manp-(1-2)-a-D-Manp-(1-2)-a-D-Manp-(1-3)-b-D-Manp-(1-4)-b-D-GlcpNAc-(1-4)-b-D-GlcpNAc |
Show graphically |
Structure type: oligomer
Compound class: N-glycan
Reference(s) to other database(s): GTC:G32149KV
- Compound ID: 21093
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a-D-Manp-(1-6)-+
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a-D-Manp-(1-3)-a-D-Manp-(1-6)-+
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a-D-Manp-(1-2)-a-D-Manp-(1-2)-a-D-Manp-(1-3)-b-D-Manp-(1-4)-b-D-GlcpNAc-(1-4)-b-D-GlcpNAc |
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Structure type: oligomer
Compound class: N-glycan
Reference(s) to other database(s): GTC:G68668TB
- Compound ID: 21094
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a-D-Manp-(1-3)-+
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a-D-Manp-(1-6)-+ |
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a-D-Manp-(1-3)-a-D-Manp-(1-6)-b-D-Manp-(1-4)-b-D-GlcpNAc-(1-4)-b-D-GlcpNAc |
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Structure type: oligomer
Compound class: N-glycan, polysaccharide, glucomannan, N-polysaccharide
Reference(s) to other database(s): GTC:G55220VL
- Compound ID: 21095
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a-D-Glcp-(1-3)-a-D-Manp-(1-2)-a-D-Manp-(1-2)-a-D-Manp-(1-3)-+
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a-D-Manp-(1-3)-+ |
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a-D-Manp-(1-2)-+ | |
| | |
D-Manp-(1-?)-a-D-Manp-(1--P--6)--a-D-Manp-(1-6)-a-D-Manp-(1-6)-b-D-Manp-(1-4)-b-D-GlcpNAc-(1-4)-b-D-GlcpNAc |
Show graphically |
Structure type: oligomer
Compound class: N-glycan
Reference(s) to other database(s): GTC:G13915GK
- Compound ID: 21096
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a-D-Glcp-(1-3)-a-D-Manp-(1-2)-a-D-Manp-(1-2)-a-D-Manp-(1-3)-+
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a-D-Manp-(1-3)-+ |
| |
D-Manp-(1-?)-a-D-Manp-(1--P--6)--a-D-Manp-(1-6)-a-D-Manp-(1-6)-b-D-Manp-(1-4)-b-D-GlcpNAc-(1-4)-b-D-GlcpNAc |
Show graphically |
Structure type: oligomer
Compound class: N-glycan
Reference(s) to other database(s): GTC:G68395BT
- Compound ID: 21097
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a-D-Glcp-(1-3)-a-D-Manp-(1-2)-a-D-Manp-(1-2)-a-D-Manp-(1-3)-+
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a-D-Manp-(1-3)-+ |
| |
a-D-Manp-(1--P--6)--a-D-Manp-(1-6)-a-D-Manp-(1-6)-b-D-Manp-(1-4)-b-D-GlcpNAc-(1-4)-b-D-GlcpNAc |
Show graphically |
Structure type: oligomer
Compound class: N-glycan
Reference(s) to other database(s): GTC:G85386SY
- Compound ID: 21098
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a-D-Manp-(1-2)-a-D-Manp-(1-2)-a-D-Manp-(1-3)-+
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a-D-Manp-(1-3)-+ |
| |
a-D-Manp-(1--P--6)--a-D-Manp-(1-6)-a-D-Manp-(1-6)-b-D-Manp-(1-4)-b-D-GlcpNAc-(1-4)-b-D-GlcpNAc |
Show graphically |
Structure type: oligomer
Compound class: N-glycan
Reference(s) to other database(s): GTC:G84586MS
- Compound ID: 21099
|
a-D-Manp-(1-3)-+
|
a-D-Manp-(1-3)-+ |
| |
a-D-Manp-(1--P--6)--a-D-Manp-(1-6)-a-D-Manp-(1-6)-b-D-Manp-(1-4)-b-D-GlcpNAc-(1-4)-b-D-GlcpNAc |
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Structure type: oligomer
Compound class: N-glycan
Reference(s) to other database(s): GTC:G27753MI
- Compound ID: 21100
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a-D-Glcp-(1-3)-a-D-Manp-(1-2)-a-D-Manp-(1-2)-a-D-Manp-(1-3)-+
|
/Variants 0/-b-D-Manp-(1-4)-b-D-GlcpNAc-(1-4)-b-D-GlcpNAc
/Variants 0/ is:
a-D-Manp-(1-2)-a-D-Manp-(1-3)-+
|
a-D-Manp-(1--P--6)--a-D-Manp-(1-6)-a-D-Manp-(1-6)-
OR (exclusively)
a-D-Manp-(1-3)-+
|
a-D-Manp-(1-2)-+ |
| |
a-D-Manp-(1--P--6)--a-D-Manp-(1-6)-a-D-Manp-(1-6)- |
Show graphically |
Structure type: oligomer
Compound class: N-glycan
- Compound ID: 21101
|
a-D-Glcp-(1-3)-a-D-Manp-(1-2)-a-D-Manp-(1-2)-a-D-Manp-(1-3)-+
|
/Variants 0/-b-D-Manp-(1-4)-b-D-GlcpNAc-(1-4)-b-D-GlcpNAc
/Variants 0/ is:
a-D-Manp-(1--P--6)--a-D-Manp-(1-6)-+
|
D-Manp-(1-?)-D-Manp-(1-?)-a-D-Manp-(1-3)-a-D-Manp-(1-6)-
OR (exclusively)
D-Manp-(1-?)-a-D-Manp-(1-3)-+
|
D-Manp-(1-?)-+ |
| |
a-D-Manp-(1--P--6)--a-D-Manp-(1-6)-a-D-Manp-(1-6)-
OR (exclusively)
a-D-Manp-(1-3)-+
|
a-D-Manp-(1--P--6)--+ |
| |
D-Manp-(1-?)-D-Manp-(1-?)-a-D-Manp-(1-6)-a-D-Manp-(1-6)- |
Show graphically |
Structure type: oligomer
Compound class: N-glycan
- Compound ID: 21102
|
/Variants 0/-+
|
a-D-Glcp-(1-3)-a-D-Manp-(1-2)-a-D-Manp-(1-2)-a-D-Manp-(1-3)-b-D-Manp-(1-4)-b-D-GlcpNAc-(1-4)-b-D-GlcpNAc
/Variants 0/ is:
a-D-Manp-(1-6)-+
|
a-D-Manp-(1-2)-a-D-Manp-(1-3)-a-D-Manp-(1-6)-
OR (exclusively)
a-D-Manp-(1-3)-+
|
a-D-Manp-(1-2)-a-D-Manp-(1-6)-a-D-Manp-(1-6)- |
Show graphically |
Structure type: oligomer
Compound class: N-glycan
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2. (Article ID: 9213)
Wang Z-R, Yang H-X, Peng X-P, Li G, Lou H-X
Induced production of zinniol analogues by co-cultivation of two endophytic fungi in the same ecological niche
Phytochemistry Letters 35 (2020)
206-210
Three zinniol analogues, pleoniols A-C (1-3), together with a known compound (4), were isolated from a mixed fermentation of two endophytic fungi, Pleosporales sp. F46 and Acremonium pilosum F47, both of which are found the pedicel of the medicinal plant Mahonia fortunei. High-performance liquid chromatography analysis showed that none of compounds 1-4 were detected when either one of the two fungi was cultured alone. The structures of compounds 1-4, including the absolute configurations, were deduced based on the interpretation of HRMS, NMR, and optical rotation data. Compounds 1-3 exhibited no antimicrobial efficacies against four Gram-positive or Gram-negative bacteria and two plant pathogenic fungi. Moreover, they demonstrated no obvious cytotoxic activities against four cancer cell lines, A549, MDA-MB-231, CT-26 and MCF-7. Our work indicates that the co-culture of endophytes in the same ecological niche is an effective approach for promoting interspecies interaction and enriching chemical diversity.
endophytes, bioactivity, secondary metabolites, co-cultivation, zinniol analogues
Publication DOI: 10.1016/j.phytol.2019.12.007Journal NLM ID: 101513432Publisher: Amsterdam: Elsevier
Correspondence: Li G
qdu.edu.cn>; Lou H-X sdu.edu.cn>
Institutions: Department of Natural Medicinal Chemistry and Pharmacognosy, School of Pharmacy, Qingdao University, Qingdao, China, Department of Natural Product Chemistry, Key Laboratory of Chemical Biology of Ministry of Education, School of Pharmaceutical Sciences, Shandong University, Jinan, China
Methods: 13C NMR, 1H NMR, IR, DNA sequencing, TLC, acid hydrolysis, biological assays, HPLC, GPC, extraction, optical rotation measurement, cell growth, HR-ESI-MS, antibacterial assay, cytotoxicity assay, antifungal activity test, flash chromatography, filtration
The publication contains the following compound(s):
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