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1.
(
Organism ID:
8883)
Clostridioides
difficile
(
NCBI TaxID 1496
,
species name lookup
)
Previously named:
Clostridium difficile
Taxonomic group:
bacteria
Phylum:
Firmicutes
The following compound(s) are assigned to this organism:
Compound ID:
14831
b-D-Glcp-(1-3)-+ | -4)-a-D-Glcp-(1-4)-b-D-GalpNAc-(1-3)-a-D-Manp-(1--P--6)--b-D-Glcp-(1-3)-b-D-GalpNAc-(1-
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Structure type:
suggested polymer biological repeating unit
Trivial name:
PSII
Compound class:
cell wall polysaccharide
Reference(s) to other database(s):
GTC:G03661KQ
ACS Infectious Diseases
2020, "Clostridioides difficile cd2775 Encodes a Unique Mannosyl-1-Phosphotransferase for Polysaccharide II Biosynthesis"
CSDB ID 32157
(all data & tools)
Compound ID:
14832
b-D-Glcp-(1-3)-+ | P-6)-b-D-Glcp-(1-3)-b-D-GalpNAc-(1-4)-a-D-Glcp-(1-4)-b-D-GalpNAc-(1-3)-a-D-Manp-(1--/(->1)(CH2)3NH2 (3-aminopropyl)/
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Structure type:
oligomer
Aglycon:
(->1)(CH2)3NH2 (3-aminopropyl)
Trivial name:
PSII
Compound class:
cell wall polysaccharide
Reference(s) to other database(s):
GTC:G04246JR
ACS Infectious Diseases
2020, "Clostridioides difficile cd2775 Encodes a Unique Mannosyl-1-Phosphotransferase for Polysaccharide II Biosynthesis"
CSDB ID 3842
(all data & tools)
Compound ID:
7793
a-L-Rhap-(1-3)-+ | -4)-a-L-Rhap-(1-3)-b-D-Glcp-(1-4)-a-D-Glcp-(1-2)-a-D-Glcp-(1-P-
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Structure type:
polymer chemical repeating unit
Trivial name:
cell-surface polysaccharide, pentaglycosyl phosphate repeating unit cell-surface polysaccharide, rhamnoglucan PSI, PS1, cell-surface polysaccharide PS-I, PSI, PSI repeating unit
Compound class:
cell wall polysaccharide, lipoteichoic acid
Reference(s) to other database(s):
GTC:G60087JR, GlycomeDB:
36857
Chemical Reviews
2022, "Synthetic Glycans to Improve Current Glycoconjugate Vaccines and Fight Antimicrobial Resistance"
CSDB ID 20886
(all data & tools)
Compound ID:
7794
b-D-Glcp-(1-3)-+ | -6)-b-D-Glcp-(1-3)-b-D-GalpNAc-(1-4)-a-D-Glcp-(1-4)-b-D-GalpNAc-(1-3)-a-D-Manp-(1-P-
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Structure type:
polymer chemical repeating unit
Trivial name:
cell-surface polysaccharide, hexaglycosyl phosphate repeating unit cell-surface polysaccharide, PSII
Compound class:
CPS, cell wall polysaccharide
Reference(s) to other database(s):
GTC:G48239WN, GlycomeDB:
36946
Chemical Reviews
2022, "Synthetic Glycans to Improve Current Glycoconjugate Vaccines and Fight Antimicrobial Resistance"
CSDB ID 20887
(all data & tools)
Compound ID:
16042
GroA-(2-1)-+ | -6)-a-D-GlcpNAc-(1-3)-a-D-GlcpNAc-(6-P-
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Structure type:
polymer chemical repeating unit
Trivial name:
lipoteichoic acid-like glycan
Compound class:
cell wall polysaccharide
Chemical Reviews
2022, "Synthetic Glycans to Improve Current Glycoconjugate Vaccines and Fight Antimicrobial Resistance"
CSDB ID 20888
(all data & tools)
Compound ID:
16043
a-L-Rhap-(1-3)-+ | a-L-Rhap-(1-3)-b-D-Glcp-(1-4)-a-D-Glcp-(1-2)-a-D-Glcp-(1--/5-amino-pentyl, spacer-CRM197/
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Structure type:
oligomer
Aglycon:
5-amino-pentyl, spacer-CRM197
Compound class:
cell wall polysaccharide
Chemical Reviews
2022, "Synthetic Glycans to Improve Current Glycoconjugate Vaccines and Fight Antimicrobial Resistance"
CSDB ID 20889
(all data & tools)
Compound ID:
16044
b-D-Glcp-(1-3)-+ | P-6)-b-D-Glcp-(1-3)-b-D-GalpNAc-(1-4)-a-D-Glcp-(1-4)-b-D-GalpNAc-(1-3)-a-D-Manp-(1--/spacer-CRM197/
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Structure type:
oligomer
Aglycon:
spacer-CRM197
Trivial name:
repeating unit conjugate
Compound class:
cell wall polysaccharide
Chemical Reviews
2022, "Synthetic Glycans to Improve Current Glycoconjugate Vaccines and Fight Antimicrobial Resistance"
CSDB ID 20890
(all data & tools)
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