CSDB: Search results

Found 1 organism. Displayed organism 1
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1. (Organism ID: 895)

Shigella flexneri 5a

(NCBI TaxID 424718, species name lookup)

Taxonomic group: bacteria
Phylum: Proteobacteria

The following compound(s) are assigned to this organism:

Compound ID: 1420

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Compound ID: 1519

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Structure type: polymer biological repeating unit
Compound class: O-polysaccharide
Reference(s) to other database(s): GTC:G88580LT, GlycomeDB:26158

European Journal of Organic Chemistry 2002, "Convergent synthesis, NMR and conformational analysis of tetra- and pentasaccharide haptens of the Shigella flexneri serotype 5a O-specific polysaccharide"
CSDB ID 9012 (all data & tools)
Compound ID: 1520

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Structure type: oligomer
Reference(s) to other database(s): GlycomeDB:27369

European Journal of Organic Chemistry 2002, "Convergent synthesis, NMR and conformational analysis of tetra- and pentasaccharide haptens of the Shigella flexneri serotype 5a O-specific polysaccharide"
CSDB ID 9013 (all data & tools)
Compound ID: 2891

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Structure type: oligomer
Trivial name: fragments of O-specific polysaccharide
Compound class: O-polysaccharide, O-antigen
Reference(s) to other database(s): GlycomeDB:4003

Journal of Carbohydrate Chemistry 1999, "Synthesis of a tri- and tetrasaccharide fragment specific for the Shigella flexneri serotype 5a O-antigen. A reinvestigation"
CSDB ID 3713 (all data & tools)
Compound ID: 2892

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Structure type: oligomer
Trivial name: fragments of O-antigen
Reference(s) to other database(s): GlycomeDB:4033

Journal of Carbohydrate Chemistry 2000, "Linear synthesis of the methyl glycosides of tri-, tetra-, and pentasaccharide fragments of the Shigella flexneri serotype 5a O-antigen"
CSDB ID 3714 (all data & tools)

Compound ID: 2893

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Compound ID: 2894

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Structure type: oligomer
Trivial name: methyl glycoside of linear epitope
Reference(s) to other database(s): GlycomeDB:26091

Tetrahedron 2002, "Synthesis and NMR study of a linear pentasaccharide fragment of the Shigella flexneri serotype 5a O-specific polysaccharide"
CSDB ID 3717 (all data & tools)
Compound ID: 2958

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Structure type: oligomer
Reference(s) to other database(s): GlycomeDB:4034

Journal of Carbohydrate Chemistry 2000, "Linear synthesis of the methyl glycosides of tri-, tetra-, and pentasaccharide fragments of the Shigella flexneri serotype 5a O-antigen"
CSDB ID 3844 (all data & tools)

Compound ID: 2959

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Compound ID: 2964

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Structure type: polymer chemical repeating unit
Compound class: O-polysaccharide, O-antigen
Reference(s) to other database(s): GTC:G88580LT, GlycomeDB:26158

Tetrahedron 2002, "Synthesis and NMR study of a linear pentasaccharide fragment of the Shigella flexneri serotype 5a O-specific polysaccharide"
CSDB ID 3850 (all data & tools)

Journal of Carbohydrate Chemistry 1999, "Synthesis of a tri- and tetrasaccharide fragment specific for the Shigella flexneri serotype 5a O-antigen. A reinvestigation"
CSDB ID 3857 (all data & tools)

Biochemistry (Moscow) 1994, "The structure of lipopolysaccharides of gram-negative bacteria. III. The structure of O-antigens: A review"
CSDB ID 108654 (all data & tools)

Gene 1997, "Shigella flexneri type-specific antigen V: cloning, sequencing and characterization of the glucosyl transferase gene of temperate bacteriophage SfV"
CSDB ID 23911 (all data & tools)

Glycobiology 2011, "Effects of backbone substitutions on the conformational behaviour of Shigella flexneri O-antigens: implications for vaccine strategy"
CSDB ID 26500 (all data & tools)

Biochemistry (Moscow) 2015, "O-Antigen modifications providing the antigenic diversity of Shigella flexneri and the underlying genetic mechanisms"
CSDB ID 30780 (all data & tools)

Journal of Computational Chemistry 2016, "CarbBuilder: Software for building molecular models of complex oligo- and polysaccharide structures"
CSDB ID 11763 (all data & tools)

NPJ vaccines 2022, "Rapid generation of Shigella flexneri GMMA displaying natural or new and cross-reactive O-Antigens"
CSDB ID 20974 (all data & tools)
Compound ID: 2970

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Structure type: oligomer
Reference(s) to other database(s): GlycomeDB:4035

Journal of Carbohydrate Chemistry 1999, "Synthesis of a tri- and tetrasaccharide fragment specific for the Shigella flexneri serotype 5a O-antigen. A reinvestigation"
CSDB ID 3856 (all data & tools)
Compound ID: 5166

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Structure type: polymer chemical repeating unit
Compound class: LPS
Reference(s) to other database(s): GTC:G38978AK, GlycomeDB:5574

Carbohydrate Research 1987, "A 2D proton NMR study of some Shigella flexneri O-polysaccharides"
CSDB ID 115110 (all data & tools)
Compound ID: 7006

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Structure type: polymer chemical repeating unit
Compound class: O-polysaccharide, O-antigen
Reference(s) to other database(s): GTC:G70143LF, GlycomeDB:27905

Journal of Biological Chemistry 2006, "Towards a better understanding of the basis of molecular mimicry of polysaccharide antigens by peptides : The example of Shigella flexneri 5a"
CSDB ID 20227 (all data & tools)

Compound ID: 9156

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Compound ID: 10457

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Compound ID: 14499

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Structure type: suggested polymer biological repeating unit
Compound class: O-polysaccharide
Reference(s) to other database(s): GTC:G88580LT

Molecular Immunology 2020, "Specificity of human natural antibodies referred to as anti-Tn"
CSDB ID 3625 (all data & tools)

Compound ID: 14554

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