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1.
(
Organism ID:
916)
Agrobacterium
tumefaciens
C58
(
NCBI TaxID 176299
,
species name lookup
)
Later renamed to:
Agrobacterium fabrum
str. C58
Taxonomic group:
bacteria
Phylum:
Proteobacteria
The following compound(s) are assigned to this organism:
Compound ID:
1465
?%P-1)-+ | R-3HOPam-(1-2)-+ | | | 3HOMyr-(1-3)-+ | | | | | 3HOBut-(1-27)-27HOMon-(1-3)-3HOPam-(1-2)-b-D-GlcpN-(1-6)-a-D-GlcpN | | P-4)-+ 3HOMyr-(1-3)-+
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Structure type:
oligomer
Compound class:
lipid A
Glycobiology
2004, "Full structural characterization of the lipid A components from the Agrobacterium tumefaciens strain C58 lipopolysaccharide fraction"
CSDB ID 8946
(all data & tools)
Compound ID:
1466
R-3HOPam-(1-2)-+ | 3HOMyr-(1-3)-+ | | | ?%3HOBut-(1-27)-27HOMon-(1-3)-/Variants 0/-b-D-GlcpN-(1-6)-a-D-GlcpN | P-4)-+ /Variants 0/ is: 3HOPam-(1-2)- OR (exclusively) LIP-(1-2)-
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Structure type:
oligomer
Compound class:
lipid A
Glycobiology
2004, "Full structural characterization of the lipid A components from the Agrobacterium tumefaciens strain C58 lipopolysaccharide fraction"
CSDB ID 31345
(all data & tools)
Compound ID:
2347
-3)-a-L-6dTalp-(1-
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Structure type:
polymer chemical repeating unit
Compound class:
O-polysaccharide
Reference(s) to other database(s):
GTC:G06632BP, GlycomeDB:
25387
Carbohydrate Research
2003, "Elucidation of the O-chain structure from the lipopolysaccharide of Agrobacterium tumefaciens strain C58"
CSDB ID 1294
(all data & tools)
Compound ID:
6107
LIP-(1-1)-+ | S-6)-a-D-Glcp-(1-3)-Gro | LIP-(1-2)-+
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Structure type:
oligomer
Trivial name:
glycosyldiacylglycerol
Journal of Lipid Research
1994, "Occurrence of sulfoquinovosyl diacylglycerol in some members of the family Rhizobiaceae"
CSDB ID 140399
(all data & tools)
Compound ID:
7738
-3)-a-L-6dTalp4(%)Ac-(1-
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Structure type:
polymer chemical repeating unit
Compound class:
O-polysaccharide, O-antigen
Reference(s) to other database(s):
GTC:G85014VU
Carbohydrate Research
2008, "Lipopolysaccharide structures from Agrobacterium and Rhizobiaceae species"
CSDB ID 22883
(all data & tools)
Compound ID:
12540
3HOMyr-(1-3)-+ 3HOPam-(1-2)-+ | | 3HOBut-(1-27)-27HOMon-(1-3)-3HOPam-(1-2)-b-D-GlcpN-(1-6)-a-D-GlcpN-(1-P | | P-4)-+ 3HOMyr-(1-3)-+
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Structure type:
oligomer
Compound class:
lipid A
Biochimica et Biophysica Acta
2017, "Structure, biosynthesis and function of unusual lipids A from nodule-inducing and N2-fixing bacteria"
CSDB ID 12068
(all data & tools)
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