CSDB monomer namespace

Please note! The statistics on this page is from 2015 (inclusively) till now, as requested

The table lists residues present in the database and their occurencies.
Click + to view occurencies and atomic patterns for different forms of each residue.
Column explanations are below the table.

To view a list of supported residue and superclass names (including those not present in the database) click here: Residue subdatabase dump


Operations on all residues: Expand all Collapse all Filter to the last years

To re-sort the list click the according column name.

Residue Size Type Abundance Structures WURCSProton count / Atom types Description
+1,2,6daraHexhexald00dd122m2211131,2,6-trideoxy-arabino-hexose (olivose in C-glycoside)
+1,3dgroTet-oltetol00m2dh31221,3-dideoxy-glycero-tetritol
+1,4dxylHexhexald157d21d2h2112121,4-dideoxy-xylo-hexose
+1,6anhGlchexald00?2122h_1-62111121,6-anhydroglucose
+1,6anhGlcNhexald00?2122h_1-6_2*N2111122-amino-1,6-anhydro-2-deoxyglucose
+1,6anhMurnon*ald11?2122h_1-6_2*N_3*OC^RCO/4=O/3C1111121031,6-anhydro-2-amino-3-[(R)-1-carboxyethyl]-2-deoxy-D-glucose (1,6-anhydromuramic acid)
+1,6dGulhexald11d2212m2111131,6-dideoxygulose
+10b1C19mvalip33*OCCCCCCCCCC^XCCCCCCCC/12C/3=O0222222221222222233tuberculostearic acid (10-methyl-octadecanoic acid)
+11HOLaunsulip147*1OCCCCCCCCCCC^XC/5O*3/3=O02222222221311-hydroxy-dodecanoic acid
+13HOBehnsulip85*1OCCCCCCCCCCCCC^XCCCCCCCCC/15O*3/3=O022222222222122222222313-hydroxy-docosanoic acid
+15,16HOPamnsulip85*1OCCCCCCCCCCCCCCC^XCO*16/17O*15/3=O022222222222221215,16-dihydroxy-hexadecanoic acid
+15HOPamnsulip53*1OCCCCCCCCCCCCCCCC/17O*15/3=O022222222222221315-hydroxy-hexadecanoic acid
+17HOBehnsulip88*1OCCCCCCCCCCCCCCCCC^XCCCCC/15O*3/3=O022222222222222212222317-hydroxy-docosanoic acid
+17HOC18={?,?}nsulip42@C18{=,=}0???????????????1317-hydroxy-octadecadienoic acid
+17HOC18={?}nsulip00@C18{=}0???????????????1317-hydroxy-octadecenoic acid
+17HOLinmvalip437*OCCCCCCCCC=^ZCCC=^ZCCCCCC/19O*17/3=O/02222222112112221317-hydroxy-linoleic acid (17-hydroxy-9Z,12Z-octadecadienoic acid)
+17HOOlensulip31279*1OCCCCCCCCC=^ZCCCCCCCC^XC/19O*17/3=O02222222112222221317-hydroxy-cis-9-octadecenoic acid
+17HOStensulip2810*1OCCCCCCCCCCCCCCCC^XCC/19O*17/3=O02222222222222221317-hydroxy-stearic acid
+18HOOlensu*lip63*1OCCCCCCCCC=^ZCCCCCCCCC/20O*18/3=O02222222112222222218-hydroxy-cis-9-octadecenoic acid
+18HOStensu*lip21*1OCCCCCCCCCCCCCCCCCC/20O*18/3=O02222222222222222218-hydroxy-stearic acid
+1dAllhexald2611d2222h2111121-deoxy-allose
+1dEry-oltetol2911m22h31121-deoxyerythritol
+1dGalhexald22d2112h2111121-deoxy-galactose (the same as linear form of 1,5-anhGal-ol, which still has 1-5 cycle)
+1dGlchexald3420d2122h2111121-deoxy-glucose (the same as linear form of 1,5-anhGlc-ol, which still has 1-5 cycle)
+1dOlihexald1010dd122m2211131,2,6-trideoxy-arabino-hexose (olivose in C-glycoside)
+1dRhahexald11d1122m2111131,6-dideoxymannose (1-deoxyrhamnose)
+1dThre-oltetol11m12h31121-deoxythreitol
+1dThre3N-oltetol00m12h_3*N31123-amino-1,3-dideoxythreitol
+2,15,16HOPamnsulip147*1OCC^XCCCCCCCCCCCCC^XCO*16/17O*15/4O*2/3=O01222222222222122,15,16-trihydroxy-hexadecanoic acid
+2,4HO3,3,4MePro-5-oxonsu 11AxCXA-2x_2-5*N*_3*C_3*C_4*C000003332,4-dihydroxy-3,3,4-trimethyl-5-oxoproline
+2,4HOButnsulip135*1OCC^XCCO*4/4O*2/3=O01222,4-dihydroxybutanoic acid (3d-glycero-tetronic acid)
+2,5anhManhexald1111A1122h_2-51111122,5-anhydromannose
+2,5anhMan-olhexol104h1122h_2-52111122,5-anhydromannitol
+2,5anhTalhexald43A1112h_2-51111122,5-anhydrotalose
+2,6daraHexhexald00?d122m1211132,6-dideoxy-arabino-hexose (olivose, 2d-Qui = 2d-Rha), 3OMe-derivative = oleandrose
+2,6daraHex3Nhexald00?12d2m_3*N1211133-amino-2,3,6-trideoxy-arabino-hexose
+2,6daraHex4Nhexald00?d122m_4*N1211134-amino-2,4,6-trideoxy-arabino-hexose
+2,6dlyxHex3Nhexald00?11d2m_3*N1211133-amino-2,3,6-trideoxy-lyxo-hexose
+2,6dxylHexhexald00?d212m1211132,6-dideoxy-xylo-hexose (sarmentose = boiviniose, 2d6d-Gul = 2d6d-Ido)
+2,7anhKdo-oloctol00Axd1122h_2-7012111122,7-anhydro-3-deoxy-D-glycero-D-galacto/talo-octonic acid
+2,7anhmanOct-onicoctopn00Axx1122h_2-7011111122,7-anhydro-manno-octonic acid
+2,7anhSedhepket00h?1222h_2-720111122,7-anhydro-altro-hept-2-ulopyranose (sedoheptulosan if D)
+27HOMonnsulip2712*1OCCCCCCCCCCCCCCCCCCCCCCCCCCC^XC/29O*27/3=O022222222222222222222222221327-hydroxy-octacosanoic acid
+27oxoMonnsu*lip22*OCCCCCCCCCCCCCCCCCCCCCCCCCCCC/29=O/3=O022222222222222222222222220327-oxo-octacosanoic acid
+2b14b1Pammva*lip31*OCC^XCC^XCCCCCCCCCC/6C/4C/3=O01212222222223332,4-dimethyl-tetradecanoic acid
+2daraHexAhexald54?d122A1211102-deoxy-arabino-hexuronic acid (2-deoxyglucuronic acid)
+2dRibpenald112?d22h121122-deoxy-erytro-pentose (2d-Rib = 2d-Ara)
+2dthrPen4Npenald55?d12h_4*N121124-amino-2,4-dideoxy-threo-pentose
+2HOAchnsulip22*1OCC^XCCCCCCCCCCCCCCCCCC/4O*3/3=O012222222222222222232-hydroxy-icosanoic acid
+2HOC13nsulip31*1OCC^XCCCCCCCCCCC/4O*3/3=O01222222222232-hydroxy-tridecanoic acid
+2HOC15nsulip105*1OCC^XCCCCCCCCCCCCC/4O*3/3=O0122222222222232-hydroxy-pentadecanoic acid
+2HOC16={t3}nsulip3513*1OC^XCC=^ECCCCCCCCCCCCC/4O*2/3=O01112222222222232-hydroxy-trans-3-hexadecenoic acid
+2HOC18={t3}nsulip5818*1OCC^XC=^ECCCCCCCCCCCCCCC/4O*2/3=O0111222222222222232-hydroxy-trans-3-octadecenoic acid
+2HOGltnsu 11*1OCC^XCCCO*5/7=O/4O*2/3=O012202-hydroxyglutaric acid
+2HOLaunsulip6639*1OCC^XCCCCCCCCCC/4O*2/3=O0122222222232-hydroxy-dodecanoic acid
+2HOLignsulip5616*1OCC^XCCCCCCCCCCCCCCCCCCCCCC/4O*2/3=O0122222222222222222222232-hydroxy-tetracosanoic acid
+2HOMarnsulip33*1OCC^XCCCCCCCCCCCCCCC/4O*3/3=O012222222222222232-hydroxy-margaric acid
+2HOMyrnsulip7327*1OCC^XCCCCCCCCCCCC/4O*2/3=O012222222222232-hydroxy-tetradecanoic acid
+2HOPamnsulip14036*1OCC^XCCCCCCCCCCCCCC/4O*2/3=O01222222222222232-hydroxy-hexadecanoic acid
+2HOStensulip10232*1OCC^XCCCCCCCCCCCCCCCC/4O*2/3=O0122222222222222232-hydroxy-stearic acid
+2HOSucnsu 84*1OCC^XCCO*4/6=O/4O*2/3=O0120malic acid (2-hydroxysuccinic acid)
+2NBznsu* 11*7OC(CC^ECC^ZCC^Z$4)/5N*2/3=O00111102-aminobenzoic acid (anthranilic acid)
+3,4,8HOPhetnsu* 44*8OCC(CC^ECC^ECC^Z$4$5)/8O*4/7O*3010011223,4,8-trihydroxy-ethylbenzene (phenylethan-3,4,8-triol, hydroxytyrosol)
+3,4HO1,3MePro-5-oxonsu 73AxXxA_2-5*N*/2C_3*C01010333,4-dihydroxy-N,3-dimethyl-5-oxoproline
+3,4HOiC15nsulip11*1OCCC^XC^XCCCCCCCCCC/15C/6O*4/5O*3/3=O0211222222221333,4-dihydroxy-iso-pentadecanoic acid
+3,5HOHexnsu*lip65*1OCCC^XCC^XC/7O*5/5O*3/3=O0212133,5-dihydroxyhexanoic acid
+3deryPenpenald739?2d2h112123-deoxy-erytro-pentose (3d-Rib = 3d-Xyl)
+3dgroTettetald00o2dh11223-deoxy-glycero-tetrose
+3dgroTet-oltetol00h2dh21223-deoxy-glycero-tetritol
+3dlyxHep-ulosarichepket11A?d112A00211103-deoxy-lyxo-hept-2-ulosaric acid (Dha_A when D)
+3dthrHex-ulosonichexket11A?d12h0021123-deoxy-threo-hex-2-ulosonic acid
+3HO2,3MePro-5-oxonsu 65AaXdA-2x_2-5*N*_2*C_3*C00020333-hydroxy-2,3-dimethyl-5-oxoproline (RR, SS, RS, SR = unknown)
+3HO3MeGltnsu 22*1OCCC^XCCO*5/7=O/5C/5O*3/3=O0202033-hydroxy-3-methylglutaric acid
+3HOAchnsulip247*1OCCC^XCCCCCCCCCCCCCCCCC/5O*3/3=O021222222222222222233-hydroxy-icosanoic acid
+3HOaiVlnsulip31*OCC^XCC/3=O/4C/5O*3011333S-hydroxy-anteisovaleric acid (2-methyl-butyric acid)
+3HOBehnsulip42*1OCCC^XCCCCCCCCCCCCCCCCCCC/5O*3/3=O02122222222222222222233-hydroxy-docosanoic acid
+3HOButnsulip316152*1OCCC^XC/5O*3/3=O02133-hydroxybutanoic acid
+3HOC13nsulip63*1OCCC^XCCCCCCCCCC/5O*3/3=O02122222222233-hydroxy-tridecanoic acid
+3HOC14={c4}nsulip65*1OCCC^XC=^XCCCCCCCCCC/5O*3/3=O021222222222233-hydroxy-tetradec-4Z-enoic acid
+3HOC15nsulip43*1OCCC^XCCCCCCCCCCCC/5O*3/3=O0212222222222233-hydroxy-pentadecanoic acid
+3HODconsulip24190*1OCCC^XCCCCCCC/5O*3/3=O02122222233-hydroxy-decanoic acid
+3HOHxonsulip117*1OCCC^XCCC/5O*3/3=O0212233-hydroxy-hexanoic acid
+3HOiC13nsulip64*1OCCC^XCCCCCCCCC/13C/5O*3/3=O02122222221333-hydroxy-iso-tridecanoic acid
+3HOiC15nsulip1711*1OCCC^XCCCCCCCCCCC/15C/5O*3/3=O0212222222221333-hydroxy-iso-pentadecanoic acid
+3HOiMarnsulip6323*1OCCC^XCCCCCCCCCCCCCC/17C/5O*3/3=O021222222222221333-hydroxy-iso-heptadecanoic acid
+3HOiMyrnsulip42*1OCCC^XCCCCCCCCCC/14C/5O*3/3=O021222222221333-hydroxy-iso-tetradecanoic acid
+3HOiVlnsu*lip11*1OCCCC/5C/5O*3/3=O020333-hydroxy-isovaleric acid
+3HOLaunsulip427128*1OCCC^XCCCCCCCCC/5O*3/3=O0212222222233-hydroxy-dodecanoic acid
+3HOMarnsulip197*1OCCC^XCCCCCCCCCCCCCC/5O*3/3=O021222222222222233-hydroxy-heptadecanoic acid
+3HOMyrnsulip1562287*1OCCC^XCCCCCCCCCCC/5O*3/3=O021222222222233-hydroxy-tetradecanoic acid
+3HOOconsulip117*1OCCC^XCCCCC/5O*3/3=O021222233-hydroxy-octanoic acid
+3HOPamnsulip33580*1OCCC^XCCCCCCCCCCCCC/5O*3/3=O02122222222222233-hydroxy-hexadecanoic acid
+3HOPronsu*lip11*1OCCCO*3/3=O022beta-lactic acid (3-hydroxypropanoic acid)
+3HOStensulip12932*1OCCC^XCCCCCCCCCCCCCCC/5O*3/3=O0212222222222222233-hydroxy-stearic acid
+3oxoMyrmva*lip1510*OCCCCCCCCCCCCCC/5=O/3=O020222222222233-oxo-tetradecanoic acid
+4,6daraHexNhexald00?12d2m_2*N1112132-amino-2,4,6-trideoxy-arabino-hexose
+4,7anhKdooct*ket207A?d1122h_4-7002111124,7-anhydro-3-deoxy-D-manno-oct-2-ulosonic acid
+4,8anhKdooct*ket32A?d1122h_4-8002111124,8-anhydro-3-deoxy-D-manno-oct-2-ulosonic acid
+4daraHexhexald158?12d2h1112124-deoxy-arabino-hexose
+4dEry-oltetol11h22m21134-deoxyerythritol (alias for 1-deoxyerythritol ?)
+4deryHex4enAhexald66?22eEA1111004-deoxy-erythro-hex-4-enuronic acid
+4deryHex4enNAhexald33?22eEA_2*N1111002-amino-2,4-dideoxy-erythro-hex-4-enuronic acid
+4dthrHex4enhexald42?12eEh1111024-deoxy-threo-hex-4-enose
+4dthrHex4enAhexald1311?12eEA1111004-deoxy-threo-hex-4-enuronic acid
+4dthrHex4enNAhexald74?12eEA_2*N1111002-amino-2,4-dideoxy-threo-hex-4-enuronic acid
+4dxylHexhexald22?21d2h1112124-deoxy-xylo-hexose
+4eLegnon*ket32A?d11122m_5*N_7*N0021111134-epilegionaminic acid (5,7-diamino-3,5,7,9-tetradeoxy-D-glycero-D-talo-non-2-ulosonic)
+4HOaiHxonsulip00*1OCCC^XC^XC/6O*4/5C/3=O0211334-hydroxy-3-methyl-pentanoic acid
+4HOButnsu*lip33*1OCCCCO*4/3=O02224-hydroxybutanoic acid
+4HOBznsu* 21*7OC(CC^ZCC^ECC^Z$4)/7O*4/3=O01101104-hydroxybenzoic acid (p-hydroxybenzoic)
+4NBznsu* 11*7OC(CC^ZCC^ECC^Z$4)/7N*4/3=O01101104-aminobenzoic acid
+6dallHephepald00?2222dh11111226-deoxy-allo-heptose
+6dAlthexald5222?1222m1111136-deoxyaltrose
+6dAltNhexald104?1222m_2*N1111132-amino-2,6-dideoxyaltrose
+6dAltN4Nhexald11?1222m_2*N_4*N1111132,4-diamino-2,4,6-trideoxyaltrose
+6daltHephepald1912?1222dh11111226-deoxy-altro-heptose
+6daraHexN-4-ulohexald11?12U2m_2*N1110132-amino-2,6-dideoxy-arabino-hexos-4-ulose
+6dgalHephepald32?2112dh11111226-deoxy-galacto-heptose
+6dglcHephepald00?2122dh11111226-deoxy-gluco-heptose
+6dgulHephepald93?2212dh11111226-deoxy-gulo-heptose
+6dIdohexald00?1212m1111136-deoxyidose
+6didoHephepald95?1212dh11111226-deoxy-ido-heptose
+6dmanHephepald4817?1122dh11111226-deoxy-manno-heptose
+6dribHex-3-ulohexald22?2U22m1101136-deoxy-ribo-hexos-3-ulose
+6dTalhexald26297?1112m1111136-deoxytalose
+6dTal3Nhexald00?1112m_3*N1111133-amino-3,6-dideoxytalose
+6dTalNhexald176?1112m_2*N1111132-amino-2,6-dideoxytalose (pneumosamine if D)
+6dxylHex-4-ulohexald22?21U2m1110136-deoxy-xylo-hexos-4-ulose
+6dxylHexN-4-ulohexald4710?21U2m_2*N1110132-amino-2,6-dideoxy-xylo-hexos-4-ulose
+8eAcinon*ket63A?d21112m_5*N_7*N0021111138-epiacinetaminic acid (5,7-diamino-3,5,7,9-tetradeoxy-D-glycero-L-altro-non-2-ulosonic)
+8eLegnon*ket2010A?d21121m_5*N_7*N0021111138-epilegionaminic (5,7-diamino-3,5,7,9-tetradeoxy-L-glycero-D-galacto-non-2-ulosonic)
+8ePsenon*ket43A?d22112m_5*N_7*N0021111138-epipseudaminic acid (5,7-diamino-3,5,7,9-tetradeoxy-D-glycero-L-manno-non-2-ulosonic)
+9b1SphdC19nsu*sph8414*1OCCCC=^ECCCC=^ECCCCCCCCCC/11C/5O*3/4N*22111122102222222233(4E,8E)-9-methyl-4,8-sphingadienine-C18
+Abehex*ald4823?2d12m1121133,6-dideoxy-D-xylo-hexose (abequose), 3dFuc=3,6dGul
+Acmva* 193323538*OCC/3=O03acetic acid
+Achmva*lip22*OCCCCCCCCCCCCCCCCCCCC/3=O02222222222222222223arachidic acid (icosanoic acid)
+Acinon*ket174A?d21111m_5*N_7*N002111113acinetaminic acid (5,7-diamino-3,5,7,9-tetradeoxy-L-glycero-L-altro-non-2-ulosonic)
+Aco3Nhex*ald00?d121m_3*N1211133-amino-2,3,6-trideoxy-L-xylo-hexose (acosamine)
+Aepnsu* 226*1OPCCN*3/3O/3=O0222-amino-ethylphosphonic acid
+aiVlmvalip124*OCC^XCC/3=O/4C01233anteisovaleric acid (2-methyl-butyric acid)
+Alansupep460137A2m_2*N013alanine
+ALKmva*alk4418@ALKYL superclass: alcohol residue (alkyl)
+All-olhexol00h2222h211112allitol
+All1N5NAhexald379?2222A_1*N_5*N1111101,5-diamino-1,5-deoxy-alluronic acid
+All5NAhexald00?2222A_5*N1111105-amino-5-deoxy-alluronic acid
+AllNhexald43?2222h_2*N1111122-amino-2-deoxyallose
+AllN3Nhexald00?2222h_2*N_3*N1111122,3-diamino-2,3-dideoxyallose
+alloInonsu*ino00112222111111allo-inositol (cis-1,2-trans-3,4,5,6-cyclohexanehexol)
+Allylmva* 95*OCC=C212allyl alcohol
+aLnnmva*lip11*OCCCCCCCCC=^XCCC=^XCCC=^XCCC/3=O/022222221121121123(9,12,15)-linolenic acid (9,12,15-octadecatrienoic acid)
+Althexald8426?1222h111112altrose
+Alt-olhexol00h1222h211112altritol
+AltAhexald4721?1222A111110altruronic acid
+AltNhexald00?1222h_2*N1111122-amino-2-deoxyaltrose
+AltN3Nhexald00?1222h_2*N_3*N1111122,3-diamino-2,3-dideoxyaltrose
+Ammva* 11665*OCC/3=N13acetimidic acid (HO-C(=NH)-CH3)
+Amihexald11?dd22m1221132,3,6-trideoxy-erythro-hexose (amicetose, default: D)
+ANY * 31 superclass: any residue
+Apipenald11?26h_3*CO11022apiose (3-C-(hydroxymethyl)-D/L-glycero-tetrose)
+Apigeninnsu* 87@apigenin~00100101000110115,7,4'-trihydroxyflavone (atom 1 is O)
+Arapenald3228175?122h11112arabinose
+Ara-olpenol6836h122h21112arabinitol
+Ara4Npenald27290?122h_4*N111124-amino-4-deoxyarabinose
+Aschex*ald96?2d11m1121133,6-dideoxy-L-arabino-hexose (ascarilose), 3dRha=3,6dAlt
+Asnnsupep8661A2dA_2*N_4*N0120asparagine
+Aspnsupep77A2dA_2*N0120aspartic acid
+aThrnsupep168A22m_2*N0113allothreonine (2S,3S)
+Behmva*lip32*OCCCCCCCCCCCCCCCCCCCCCC/3=O0222222222222222222223behenic acid (docosanoic)
+Bnmva* 298*OC(CC^ZCC^ZCC^Z$4)0111112benzoic alcohol
+Bumva*alk118*OCCCC2223butanol
+Butmva*lip5520*OCCCC/3=O0223butyric acid
+Bzmva* 51*OC(CC^ZCC^ZCC^Z$4)/3=O0111110benzoic acid
+C12={5}mva*lip227*OCCCCC=^XCCCCCCC/3=O022211222223dodec-5-enoic acid
+C12={6}mva*lip11*OCCCCCC=^XCCCCCC/3=O022221122223dodec-6-enoic acid
+C13={6}mva*lip11*OCCCCCC=^XCCCCCCC/3=O0222211222223tridec-6-enoic acid
+C13mva*lip64*OCCCCCCCCCCCCC/3=O0222222222223tridecanoic acid
+C14={5}mva*lip11*OCCCCC=^XCCCCCCCCC/3=O02221122222223tetradec-5-enoic acid
+C14={6}mva*lip53*OCCCCCC=^XCCCCCCCC/3=O02222112222223tetradec-6-enoic acid
+C14={7}mva*lip238*OCCCCCCC=^XCCCCCCC/3=O02222211222223tetradec-7-enoic acid
+C14={8}mva*lip11*OCCCCCCCC=^XCCCCCC/3=O02222221122223tetradec-8-enoic acid
+C15={6}mva*lip11*OCCCCCC=^XCCCCCCCCC/3=O022221122222223pentadec-6-enoic acid
+C15mva*lip267*OCCCCCCCCCCCCCCC/3=O022222222222223pentadecanoic acid
+C16={11}mva*lip53*OCCCCCCCCCCC=^XCCCCC/3=O0222222222112223hexadec-11-enoic acid
+C16={6}mva*lip85*OCCCCCC=^XCCCCCCCCCC/3=O0222211222222223hexadec-6-enoic acid
+C16={?,?}mva*lip22@C16{=,=}0??????????????3hexadecadienoic acid
+C17={6}mva*lip11*OCCCCCC=^XCCCCCCCCCCC/3=O02222112222222223heptadec-6-enoic acid
+C18={6}mva*lip11*OCCCCCC=^XCCCCCCCCCCCC/3=O022221122222222223octadec-6-enoic acid
+C18={?}mva*lip3013@C18{=}0????????????????3octadecenoic acid
+C18={t9}mva*lip322*OCCCCCCCCC=^ECCCCCCCCC/3=O/022222221122222223trans-9-octadecenoic acid
+C18c{9,11}mva*lip00*OCCCCCCCCCCCCCCCCC/12C$11/3=O022222221212222223cyclo-9,11-octadecanoic acid
+Cnsu* 21*OCO*/3=O carbonic acid
+Cafnsu* 33*9OCC=^EC(CC^ECC^ECC^Z$4)/9O*4/8O*3/3=O010011110caffeic acid (E-3-(3,4-dihydroxyphenyl)-2-propenoic)
+Caryophyllosedod*ald85?2d21d222m_4*1C^RC/2O*21120121113133,6,10-trideoxy-4-C-[(R)-1-hydroxyethyl]-D-erythro-D-gulo-decose
+Caryosenon*ald21?1d61215m1120111034,8-cyclo-3,9-dideoxy-L-erythro-D-ido-nonose
+Ccrmva*lip11*OCCCCCCCCCCCCCCCCCCCCCCCCCCC/3=O022222222222222222222222223carboceric acid (heptacosanoic acid)
+cdPammva*lip33*OCCCCCCCCC=^ZCCCCCCC/3=O0222222211222223cis-palmitoleic (hexadecenoic) acid
+CERnsu*lip2012@CERAMIDE superclass: ceramide (N-acylated sphyngoid)
+Ceroplasticmva*lip00*OCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC/3=O02222222222222222222222222222222223ceroplastic acid (pentatriacontanoic acid)
+CetEtNnsu 22*1OCCNC^XCO*3/7=O/6C221302-(1-carboxyethylamino)ethanol [N-(2-hydroxyethyl)alanine]
+Chonsu* 12139*OCCNC/5C/5C22?choline (2-(trimethylammonio)ethanol)
+Cinnsu* 73*OCC=^EC(CC^ZCC^ZCC^Z$4)/3=O011111110cinnamic acid (E-3-phenylprop-2-enoic)
+cis-Sphnsu*sph00*1OCC^SC^RC=^ZCCCCCCCCCC/5O*3/4N*2 any cis-sphingenine (2S,3R,4Z-2-amino-4-en-1,3-diol) (4Z-sphingenine)
+cis-SphC16nsu*sph00*1OCC^SC^RC=^ZCCCCCCCCCCCC/5O*3/4N*22111122222222223cis-hexadecasphingosine
+cis-SphC20nsu*sph00*1OCC^SC^RC=^ZCCCCCCCCCCCCCCCC/5O*3/4N*221111222222222222223cis-icosasphingosine
+cis-SphC22nsu*sph00*1OCC^SC^RC=^ZCCCCCCCCCCCCCCCCCC/5O*3/4N*22111122222222222222223cis-sphingosine C22
+cisInonsu*ino00111111111111cis-inositol (cis-1,2,3,4,5,6-cyclohexanehexol)
+Cmmva* 3214*NCO/3=O carbamic acid (H2N-COOH) (WURCS is given for N-linked Cm)
+Colhex*ald5428?1d21m1121133,6-dideoxy-L-xylo-hexose (colitose), 3dFuc=3,6dGul
+Crtmva*lip158*OCCCCCCCCCCCCCCCCCCCCCCCCCC/3=O02222222222222222222222223cerotic acid (hexacosanoic acid)
+cVacmva*lip11*OCCCCCCCCCCC=^ZCCCCCCC/3=O022222222211222223cis-vaccenic (cis-11-octadecenoic) acid
+Cyanidinnsu* 11@cyanidin~00010101000100113,3',4',5,7-pentahydroxyflavylium (atom 1 is O)
+Cysnsupep195A2h_2*N_3*S012cysteine
+d2Achmva*lip00*OCCCCCCCC=^XCCC=^XCCCCCCCCC/3=O022222211211222222238,11-icosadienoic acid
+d3Achmva*lip00*OCCCCC=^XCCC=^XCCC=^XCCCCCCCCC/3=O022211211211222222235,8,11-icosatrienoic acid
+d4Achmva*lip00*OCCCCC=^XCCC=^XCCC=^XCCC=^XCCCCCC/3=O02221121121121122223arachidonic acid (5,8,11,14-icosatetraenoic acid)
+Dcomva*lip5529*OCCCCCCCCCC/3=O0222222223capric acid (decanoic acid)
+DD3,9dgulNon5N7N-ulosonicnon*ket00A?d22122m_5*N_7*N0021111135,7-diamino-3,5,7,9-tetradeoxy-D-glycero-D-gulo-non-2-ulosonic acid
+DD3,9dthraltNon-onicnon*opn22A1d22212m0121111133,9-dideoxy-D-threo-D-altro-nononic acid
+DDaltHephep*ald44?12222h1111112D-glycero-D-altro-heptose
+DDgalHephep*ald254?21122h1111112D-glycero-D-galacto-heptose
+DDHEPhep*sug00QQQQ22Q superclass: DD-heptose
+DDidoHep-olhep*ol11h12122h2111112D-glycero-D-ido-heptitol
+DDmanHephep*ald32290?11222h1111112D-glycero-D-manno-heptose
+DDmanHep-olhep*ol61h11222h2111112D-glycero-D-manno-heptitol
+Decmva*alk74*OCCCCCCCCCC2222222223decanol
+DECdec*sug00QQQQQQQQQQ superclass: decose
+Desoct*ald00?21d2m_3*NC/2C111213333-dimethylamino-3,4,6-trideoxy-D-xylo-hexose (desosamine)
+Dighexald4917?d222m1211132,6-dideoxy-ribo-hexose (digitoxose, 2d6d-All = 2d6d-Alt), 3OMe-derivative = cymarose
+DL3,9dgalNon5N7N-ulosonicnon*ket33A?d12212m_5*N_7*N0021111135,7-diamino-3,5,7,9-tetradeoxy-D-glycero-L-galacto-non-2-ulosonic acid
+DL3,9dglcNon5N7N-ulosonicnon*ket116A?d12112m_5*N_7*N0021111135,7-diamino-3,5,7,9-tetradeoxy-D-glycero-L-gluco-nonulosonic acid
+DLglcHephep*ald3313?12112h1111112D-glycero-L-gluco-heptose
+DLmanHephep*ald00?22112h1111112D-glycero-L-manno-heptose
+dPammva*lip106*OCCCCCCCCC=^XCCCCCCC/3=O0222222211222123palmitoleic acid (hexadecenoic acid)
+epiInonsu*ino00122222111111epi-inositol (cis-1-trans-2,3,4,5,6-cyclohexanehexol)
+Erutetket00hO2h2012erythrulose
+Erwiniosedec*ald85?2d21d2m_4*1C^RC/2O*211201213133,6,8-trideoxy-4-C-[(R)-1-hydroxyethyl]-D-gulo-octose
+Ery-oltetol37261h22h2112erythritol
+Ery-onictetopn75A22h0112erythronic acid
+EryNtetald00?22h_2*N11122-amino-2-deoxyerythrose
+eryPen-4-ulopenald00?22Oh11102erythro-pentos-4-ulose (ald function at C1, keto at C4)
+eStemva*lip00*OCCCCCCCCC=^XCC=^XCC=^XCCCCC/3=O/022222221111112223eleostearic acid (9,11,13-octadecatrienoic acid)
+Etmva*alk3117*OCC23ethanol
+EtNnsu* 735306*1OCCN*2222-aminoethanol (ethanolamine)
+Etgdi*ol74hh22ethylene glycol
+Fomva* 26946*OC=O formic acid
+Fruhexket70296h?122h201112fructose (arabino-hex-2-ulose)
+Fuchexald1020420?2112m1111136-deoxygalactose (fucose)
+Fuc1N-olhexol11h2112m_1*N2111131-amino-1,6-dideoxy-D-galactitol
+Fuc3Nhexald16362?2112m_3*N1111133-amino-3,6-dideoxygalactose
+Fuc4Nhexald6323?2112m_4*N1111134-amino-4,6-dideoxygalactose (thomosamine if D)
+FucNhexald598259?2112m_2*N1111132-amino-2,6-dideoxygalactose
+FucN4Nhexald12569?2112m_2*N_4*N1111132,4-diamino-2,4,6-trideoxygalactose
+Fuclhexket00h?112m2011136-deoxy-tagatose (fucolose when L)
+Fusnon*ket125A?d12111m_5*N002111113fusaminic acid (5-amino-3,5,9-trideoxy-L-glycero-L-gluco-nonulosonic)
+Galhexald120473230?2112h111112galactose
+Gal-olhexol105h2112h211112galactitol
+Gal1Nhexald11?2112h_1*N1111121-amino-1-deoxygalactose (used for N-glycans)
+Gal3Nhexald00?2112h_3*N1111123-amino-3-deoxygalactose
+GalAhexald678293?2112A111110galacturonic acid
+GalNhexald2369932?2112h_2*N1111122-amino-2-deoxygalactose
+GalN-olhexol33h2112h_2*N2111122-amino-2-deoxygalactitol
+GalN1Nhexald55?2112h_1*N_2*N1111121,2-diamino-1,2-dideoxygalactose (used for N-glycans)
+GalN3Nhexald00?2112h_2*N_3*N1111122,3-diamino-2,3-dideoxygalactose
+GalN3NAhexald42?2112A_2*N_3*N1111102,3-diamino-2,3-dideoxygalacturonic acid
+GalNAhexald374139?2112A_2*N1111102-amino-2-deoxygalacturonic acid
+Gcnsu*lip115*1OCCO*2/3=O02glycolic acid (2-hydroxyacetic acid)
+Geddicmva*lip00*OCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC/3=O0222222222222222222222222222222223geddic acid (tetratriacontanoic acid)
+Glchexald203114271?2122h111112glucose
+Glc-olhexol8419h2122h211112glucitol
+Glc1Nhexald2319?2122h_1*N1111121-amino-1-deoxyglucose (used for N-glycans)
+Glc1Shexald102?2122m_1*S1111121-thioglucose (with C-SH bond)
+Glc3Nhexald22?2122h_3*N1111123-amino-3-deoxy-glucose (kanosamine when D)
+Glc3NAhexald11?2122A_3*N1111103-amino-3-deoxyglucuronic acid
+Glc6Nhexald22?2122h_6*N1111126-amino-6-deoxyglucose
+GlcAhexald1942803?2122A111110glucuronic acid
+GlcNhexald101453141?2122h_2*N1111122-amino-2-deoxyglucose
+GlcN-olhexol34679h2122h_2*N2111122-amino-2-deoxyglucitol
+GlcN-onichexopn73A2122h_2*N0111122-amino-2-deoxygluconic acid
+GlcN1Nhexald8460?2122h_1*N_2*N1111121,2-diamino-1,2-dideoxyglucose (used for N-glycans)
+GlcN3Nhexald17180?2122h_2*N_3*N1111122,3-diamino-2,3-dideoxyglucose
+GlcN3NAhexald18368?2122A_2*N_3*N1111102,3-diamino-2,3-dideoxyglucuronic acid
+GlcNAhexald4425?2122A_2*N1111102-amino-2-deoxyglucuronic acid
+Glnnsupep66A2ddA_2*N_5*N01220glutamine
+Gltnsu* 00*OCCCCCO*/7=O/3=O02220glutaric acid (HOOC-CH2-CH2-CH2-COOH)
+Glunsupep1911A2ddA_2*N01220glutamic acid
+Glynsu*pep8539Ah_2*N02glycine
+Grotriol1194376h2h212glycerol
+Gro-altriopn1813o2h112glyceraldehyde
+GroAnsulip4731A2h012glyceric acid (2,3-dihydroxypropanoic acid). WURCS is for 1-O(C=O)-linked Lac
+GroNtriol6524h2h_2*N2122-amino-2-deoxyglycerol (2-aminopropane-1,3-diol). Always D.
+Gulhexald11?2212h111112gulose
+Gul-olhexol00h2212h211112gulitol
+GulAhexald3112?2212A111110guluronic acid
+GulN3Nhexald00?2212h_2*N_3*N1111122,3-diamino-2,3-dideoxygulose
+GulN3NAhexald115?2212A_2*N_3*N1111102,3-diamino-2,3-dideoxyguluronic acid
+GulNAhexald1818?2212A_2*N1111102-amino-2-deoxyguluronic acid
+Hephepsug4913 alias: heptose
+HEPhep*sug81QQQQQQQ superclass: heptose
+Hexhexsug63 alias: hexose
+HEXhex*sug526QQQQQQ superclass: hexose
+Hpmva*alk00*OCCCCCCC2222223heptanol
+HSernsupep11A2dh_2*N0122homoserine
+Hxmva*alk63*OCCCCCC222223hexanol
+Hxomva*lip3314*OCCCCCC/3=O022223hexanoic acid
+iButmva*lip156*OCCC/4C/3=O0133isobutyric acid
+iC13mva*lip22*OCCCCCCCCCCCC/13C/3=O0222222222133iso-tridecanoic acid
+iC15mva*lip2411*OCCCCCCCCCCCCCC/15C/3=O022222222222133iso-pentadecanoic acid
+IdoAhexald198?1212A111110iduronic acid
+IdoN3Nhexald00?1212h_2*N_3*N1111122,3-diamino-2,3-dideoxyidose
+iGlnnsupep11Add2A_4*N_5*N02210isoglutamine
+Ilensupep11A2ddm_2*N_3*C011233isoleucine
+INOnsu* 113QQQQQQ superclass: any inositol
+iPammva*lip22*OCCCCCCCCCCCCCCC/16C/3=O0222222222222133isopalmitic acid
+iPrmva*alk11*OCC/3C133isopropanol
+iVlmva*lip43*OCCCC/5C/3=O02133isovaleric acid
+Kaempferolnsu* 55@kaempferol~00000101000110113,5,7,4'-tetrahydroxyflavone (atom 1 is O)
+Kdnnon*ket3119A?d21122h002111112ketodeoxynononic acid (3-deoxy-D-glycero-D-galacto-non-2-ulosonic)
+Kdooct*ket975404A?d1122h00211112ketodeoxyoctonic acid (3-deoxy-D-manno-oct-2-ulosonic acid)
+Kdo8Noct*ket32A?d1122h_8*N002111128-amino-3,8-dideoxy-D-manno-oct-2-ulosonic acid
+Kooct*ket4730A?11122h00111112ketooctonic acid (D-glycero-D-talo-oct-2-ulosonic acid)
+Lacnsulip14692*1OCC^XO*2/4C/3=O013lactic acid (2-hydroxypropanoic acid) (substituent for 2-ether: 1-carboxyethyl). WURCS is for 1-O-linked Lac
+Laumva*lip367177*OCCCCCCCCCCCC/3=O022222222223lauric acid (dodecanoic acid)
+LDHEPhep*sug00QQQQ21Q superclass: LD-heptose
+LDidoHephep*ald33?12121h1111112L-glycero-D-ido-heptose
+LDmanHephep*ald1205235?11221h1111112L-glycero-D-manno-heptose
+LDmanHep-olhep*ol00h11221h2111112L-glycero-D-manno-heptitol
+Legnon*ket6232A?d21122m_5*N_7*N002111113legionaminic acid (5,7-diamino-3,5,7,9-tetradeoxy-D-glycero-D-galacto-non-2-ulosonic)
+Leunsupep84A2ddm_2*N_4*C012133leucine
+Ligmva*lip54*OCCCCCCCCCCCCCCCCCCCCCCCC/3=O022222222222222222222223lignoceric acid (tetracosanoic acid)
+Linmva*lip144*OCCCCCCCCC=^ZCCC=^ZCCCCCC/3=O/022222221121122223linoleic acid (cis,cis-9,12-octadecadienoic acid)
+Lincose1SMe6Nnon*ald00a211222m_1*SC_6*N1111111336-amino-6,8-dideoxy-1-methylthio-D-erythro-D-galactose (methyl-thio-lincosamide)
+LIPnsu*lip1318206A superclass: lipid residue
+LLmanHephep*ald14412?22111h1111112L-glycero-L-manno-heptose
+Lysnsupep3315A2dddh_2*N_6*N012222lysine
+Lyxpenald54?112h11112lyxose
+Lyx-olpenol105h112h21112lyxitol
+LyxN2CMe-onichexopn00A512h_2*N_2*C0011232-amino-2-deoxy-2-C-methyllyxonic acid
+Malnsu* 137*OCCCO*/5=O/3=O020malonic acid (HOOC-CH2-COOH)
+Manhexald219292550?1122h111112mannose
+Man-olhexol10260h1122h211112mannitol
+Man-onichexopn1910A1122h011112mannonic acid
+Man1Nhexald73?1122h_1*N1111121-amino-1-deoxymannose
+ManAhexald4816?1122A111110mannuronic acid
+ManNhexald613143?1122h_2*N1111122-amino-2-deoxymannose
+ManN3Nhexald00?1122h_2*N_3*N1111122,3-diamino-2,3-dideoxymannose
+ManN3NAhexald10436?1122A_2*N_3*N1111102,3-diamino-2,3-dideoxymannuronic acid
+ManNAhexald20372?1122A_2*N1111102-amino-2-deoxymannuronic acid
+Marmva*lip276*OCCCCCCCCCCCCCCCCC/3=O02222222222222223margaric acid (heptadecanoic acid)
+Memva*alk1443619*OC3methanol
+Monmva*lip135*OCCCCCCCCCCCCCCCCCCCCCCCCCCCC/3=O0222222222222222222222222223montanic acid (octacosanoic acid)
+mPmN2nsu*pep95A2ddd1A_2*N_6*N0122210meso-diaminopimelic acid (HOOC-(S)CH(NH2)-CH2-CH2-CH2-(R)CH(NH2)-COOH)
+mucoInonsu*ino00112112111111muco-inositol (cis-1,2,4,5-trans-3,6-cyclohexanehexol)
+Murnon*ald1914?2122h_2*N_3*OC^RCO/4=O/3C1111121032-amino-3-[(R)-1-carboxyethyl]-2-deoxy-D-glucose (muramic acid)
+MVAmva* 00 superclass: any monovalent residue
+Mycoct*ald00?2122m_3*NC/2C111113333-dimethylamino-3,6-dideoxy-D-glucose (mycaminose)
+Mycolicnsu*lip19910*1OCC^XC^XCCCCCCCCCCCCCCC/5O*3/4CCCCCCCCCCCCCC/3=O01122222222222222322222222222223corynomycolic acid (C32)
+myoInonsu*ino334131111212111111myo-inositol (cis-1,2,3,5-trans-4,6-cyclohexanehexol) [2OH ax, other OH eq]