CSDB glycosyltransferase search
2477 glycosyltransferase activities have been found.
Please note that CSDB GT database covers only a few species: Arabidopsis thaliana, Escherichia coli, Saccharomyces cerevisiae, Acinetobacter baumannii.
| Enzyme / Gene | Activity | Object | References |
|---|---|---|---|
| Enzyme name: csh1p UniProt ID: P38287*  CAZy family: GT32 Gene name: CSH1 Gene GenBank ID: 852458* | Synthesized dimer: DManp(1-2)INO Donor (ID 35793): ?DManp(1-P-P-5)xXnucG Acceptor (ID 35886): l?2HOCrt(1-2)[INO(1-P-1)]xXphSphC18 Status: semi-direct evidence in vivo 
Confirmation methods: in silico; in vitro (membrane preparation); double mutation; supplementation ID: 1 Notes: Unlike Dcsg1 cells, the Dcsh1 mutant produced IPC-C (or IPC-D) and mannosylated IPC species at ratios similar to those in wild-type cells. In the Dcsg1Dcsh1 double mutant, however, production of MIPC and M(IP)2C was completely abolished | Organism (ID 9927,10666,10668,16382,16383,16384,16385,16386): Saccharomyces cerevisiae SEY6210, KA31-1A, SUY41, EHY227, KHY195, SUY45, SUY49, SUY53 Full structure (ID 35887): CSDB ID(s): 43539, 45004, 45512 Molecule role (precursor of): glycolipid | Lisman et al. 2004 DOI: 10.1074/jbc.M306119200 Uemura et al. 2003 DOI: 10.1074/jbc.M305498200 Beeler et al. 1997 DOI: 10.1007/s004380050530 Tanaka et al. 2018 DOI: 10.1111/febs.14509 Morimoto et al. 2015 DOI: 10.1111/mmi.12896 |
| Enzyme name: sur1p UniProt ID: P33300* CAZy family: GT32 Gene name: SUR1/CSG1/BCL21 Gene GenBank ID: 856050* | Synthesized dimer: DManp(1-2)INO Donor (ID 35793): ?DManp(1-P-P-5)xXnucG Acceptor (ID 35886): l?2HOCrt(1-2)[INO(1-P-1)]xXphSphC18 Status: indirect evidence in vivo
Confirmation methods: mutation ID: 3 Notes: SUR1/CSG1 is both genetically and biochemically related to CSG2. The csg1 mutant produced greatly reduced levels of the mannosylated sphingolipids MIPC and M(IP)2C, and accumulated IPC-C and IPC-D; note that IPC-C contains a monohydroxylated C26 fatty acid whereas the C26 fatty acid in IPC-D is dihydroxylated. | Organism (ID 16387,16388): Saccharomyces cerevisiae DBY689, CuH3 Full structure (ID 35887): CSDB ID(s): 43539, 45004, 45512 Molecule role (precursor of): glycolipid | |
| Enzyme name: stt3p UniProt ID: P39007* CAZy family: GT66 Gene name: STT3 Gene GenBank ID: 852862* | Synthesized dimer: DGlcpN1N(1-4)Asn Donor (ID 35888): ?DGlcp(1-2)?DGlcp(1-3)?DGlcp(1-3)aDManp(1-2)aDManp(1-2)aDManp(1-3)[aDManp(1-2)aDManp(1-3)[aDManp(1-2)aDManp(1-6)]aDManp(1-6)]bDManp(1-4)[Ac(1-2)]bDGlcpN(1-4)[Ac(1-2)]?DGlcpN(1-P-P-1)Subst // Subst = dolichol Acceptor (ID 35889): PEP(1-2)x?Asn(1-2)PEP // PEP = protein fragment Status: direct evidence in vivo
Confirmation methods: in vitro (purified protein); in vitro (membrane preparation); mutation; expression in E.coli; overexpression; supplementation ID: 7 Notes: Stt3p catalyzes the transfer of the oligosaccharide Glc3Man9GlcNAc2 (catalytic subunit of holoenzyme) from dolicholpyrophosphate onto asparagine residues of nascent polypeptide chains in the lumen of the endoplasmic reticulum. The C-terminal domain of the Stt3p subunit contains an acceptor protein recognition site and/or catalytic site | Organism (ID 16389,16390,16391,16392,16393,16394,16395): Saccharomyces cerevisiae SS328, YG176, YG397, YG390, YG535, D518E, YG157 Expressed in: E. coli Full structure (ID 35890): CSDB ID(s): 60995, 125811, 143794 Molecule role (precursor of): N-glycan | Spirig et al. 1997 DOI: 10.1007/s004380050611 Chavan et al. 2003 DOI: 10.1074/jbc.M310456200 Chavan et al. 2003b DOI: 10.1073 pnas.2536561100 Huang et al. 2010 DOI: 10.1021/bi902181v Harada et al. 2013 DOI: 10.1074/jbc.M113.486985 Zufferey et al. 1995 PMID: 7588624 Karaoglu et al. 1997 DOI: 10.1074/jbc.272.51.32513 |
| Synthesized dimer: DGlcpN1N(1-4)Asn Donor (ID 35888): ?DGlcp(1-2)?DGlcp(1-3)?DGlcp(1-3)aDManp(1-2)aDManp(1-2)aDManp(1-3)[aDManp(1-2)aDManp(1-3)[aDManp(1-2)aDManp(1-6)]aDManp(1-6)]bDManp(1-4)[Ac(1-2)]bDGlcpN(1-4)[Ac(1-2)]?DGlcpN(1-P-P-1)Subst // Subst = dolichol Acceptor (ID 35891): Ac(1-2)x?Asn(1-2)[Bz(7C-7)]x?Phe(1-2)x?Thr(1-1)NH2 Status: evidence in vitro
Confirmation methods: in vitro (purified protein); in vitro (membrane preparation); mutation ID: 8 Notes: The lumenal domain mainly comprises the catalytic Stt3p, the donor substrate-recognizing Wbp1p, and the acceptor substrate-recognizing Ost1p | Organism (ID 16396,16397): Saccharomyces cerevisiae N60Q, T541A Full structure (ID 35892): CSDB ID(s): 60995 Molecule role (analog of): N-glycan | Li et al. 2008 DOI: 10.1016/j.str.2007.12.013 Li et al. 2005 DOI: 10.1074/jbc.M410969200 Yan et al. 2002a DOI: 10.1074/jbc.M208136200 | |
| Synthesized dimer: DGlcpN1N(1-4)Asn Donor (ID 35888): ?DGlcp(1-2)?DGlcp(1-3)?DGlcp(1-3)aDManp(1-2)aDManp(1-2)aDManp(1-3)[aDManp(1-2)aDManp(1-3)[aDManp(1-2)aDManp(1-6)]aDManp(1-6)]bDManp(1-4)[Ac(1-2)]bDGlcpN(1-4)[Ac(1-2)]?DGlcpN(1-P-P-1)Subst // Subst = dolichol Acceptor (ID 35893): Subst(1-2)[Bz(7C-7)]x?Phe(1-2)x?Ala?(1-2)x?Asn(1-2)x?Ala?(1-2)x?Thr(1-2)x?Ala?(1-2)[Bz(7C-7)]x?Phe(1-1)NH2 // Subst = 125I Bolton-Hunter reagent = SMILES N{1}C(=O)CCC2=CC=C(C(I)=C2)O Status: evidence in vitro
Confirmation methods: in vitro (membrane preparation); mutation ID: 9 Notes: Sequence from residues 516 to 520, WWDYG in Stt3p, plays a central role in glycosylatable peptide recognition and/or the catalytic glycosylation process. Benzoylphenylalanine was labeled with 125I Bolton-Hunter reagent. | Organism (ID 13014,16396,16397,16398): Saccharomyces cerevisiae W303-1a, N60Q, T541A, W303 Full structure (ID 35894): CSDB ID(s): 60995 Molecule role (analog of): N-glycan | ||
| Synthesized dimer: DGlcpN1N(1-4)Asn Donor (ID 35888): ?DGlcp(1-2)?DGlcp(1-3)?DGlcp(1-3)aDManp(1-2)aDManp(1-2)aDManp(1-3)[aDManp(1-2)aDManp(1-3)[aDManp(1-2)aDManp(1-6)]aDManp(1-6)]bDManp(1-4)[Ac(1-2)]bDGlcpN(1-4)[Ac(1-2)]?DGlcpN(1-P-P-1)Subst // Subst = dolichol Acceptor (ID 35895): Subst(1-2)x?Asn(1-2)[Bz(7C-7)]x?Phe(1-2)x?Thr(1-2)x?Ala?(1-2)[Bz(7C-7)]x?Phe(1-1)NH2 // Subst = 125I Bolton-Hunter reagent = SMILES N{1}C(=O)CCC2=CC=C(C(I)=C2)O Status: evidence in vitro
Confirmation methods: in vitro (membrane preparation); mutation ID: 10 Notes: Sequence from residues 516 to 520, WWDYG in Stt3p, plays a central role in glycosylatable peptide recognition and/or the catalytic glycosylation process. Asparagine was labeled with 125I Bolton-Hunter reagent. | Organism (ID 13014,16396,16397,16398): Saccharomyces cerevisiae W303-1a, N60Q, T541A, W303 Full structure (ID 35896): CSDB ID(s): 60995 Molecule role (analog of): N-glycan | ||
| Synthesized dimer: DGlcpN1N(1-4)Asn Donor (ID 35888): ?DGlcp(1-2)?DGlcp(1-3)?DGlcp(1-3)aDManp(1-2)aDManp(1-2)aDManp(1-3)[aDManp(1-2)aDManp(1-3)[aDManp(1-2)aDManp(1-6)]aDManp(1-6)]bDManp(1-4)[Ac(1-2)]bDGlcpN(1-4)[Ac(1-2)]?DGlcpN(1-P-P-1)Subst // Subst = dolichol Acceptor (ID 35897): x?Tyr(1-2)x?Asn(1-2)x?Leu(1-2)x?Thr(1-2)x?Ser(1-2)x?Val Status: evidence in vitro
Confirmation methods: in vitro (purified protein) ID: 11 Notes: Depletion of the STT3 protein results in loss of transferase activity in vivo and a deficiency in the assembly of OTase complex | Organism (ID 16389,16395): Saccharomyces cerevisiae SS328, YG157 Full structure (ID 35898): CSDB ID(s): 60995 Molecule role (analog of): N-glycan | Zufferey et al. 1995 PMID: 7588624 Karaoglu et al. 1997 DOI: 10.1074/jbc.272.51.32513 | |
| Synthesized dimer: DGlcpN1N(1-4)Asn Donor (ID 35899): Ac(1-2)?DGlcpN(1-4)[Ac(1-2)]?DGlcpN(1-P-P-1)Subst // Subst = dolichol Acceptor (ID 35897): x?Tyr(1-2)x?Asn(1-2)x?Leu(1-2)x?Thr(1-2)x?Ser(1-2)x?Val Status: evidence in vitro
Confirmation methods: in vitro (purified protein) ID: 12 Notes: Depletion of the STT3 protein results in loss of transferase activity in vivo and a deficiency in the assembly of OTase complex | Organism (ID 16389,16395): Saccharomyces cerevisiae SS328, YG157 Full structure (ID 35900): CSDB ID(s): 40761, 45771, 45997 Molecule role (analog of): N-glycan | ||
| Synthesized dimer: DGlcpN1N(1-4)Asn Donor (ID 35899): Ac(1-2)?DGlcpN(1-4)[Ac(1-2)]?DGlcpN(1-P-P-1)Subst // Subst = dolichol Acceptor (ID 35889): PEP(1-2)x?Asn(1-2)PEP // PEP = protein fragment Status: direct evidence in vivo
Confirmation methods: in vitro (purified protein); mutation ID: 13 Notes: Depletion of the STT3 protein results in loss of transferase activity in vivo and a deficiency in the assembly of OTase complex | Organism (ID 16389,16395): Saccharomyces cerevisiae SS328, YG157 Full structure (ID 35901): CSDB ID(s): 40761, 41389, 45997 Molecule role (precursor of): N-glycan | Zufferey et al. 1995 PMID: 7588624 Karaoglu et al. 1997 DOI: 10.1074/jbc.272.51.32513 Kim et al. 2005 DOI: 10.1074/jbc.M412213200 | |
| Enzyme name: wbp1 UniProt ID: P33767* Gene name: WBP1 Gene GenBank ID: 856716* | Synthesized dimer: DGlcpN1N(1-4)Asn Donor (ID 35888): ?DGlcp(1-2)?DGlcp(1-3)?DGlcp(1-3)aDManp(1-2)aDManp(1-2)aDManp(1-3)[aDManp(1-2)aDManp(1-3)[aDManp(1-2)aDManp(1-6)]aDManp(1-6)]bDManp(1-4)[Ac(1-2)]bDGlcpN(1-4)[Ac(1-2)]?DGlcpN(1-P-P-1)Subst // Subst = dolichol Acceptor (ID 35889): PEP(1-2)x?Asn(1-2)PEP // PEP = protein fragment Status: indirect evidence in vivo
Confirmation methods: mutation; mutation (in recombinant protein) ID: 14 Notes: Subunit of the oligosaccharyl transferase (OST) complex that catalyzes the initial transfer of a defined glycan (Glc3Man9GlcNAc2 in eukaryotes) from the lipid carrier dolichol-pyrophosphate to an asparagine residue in polypeptides. | Organism (ID 16389,16399,16400,16401,16402,16403,16404,16405,16406,16407): Saccharomyces cerevisiae SS328, 45-C3, MA7-B, MA9-D, YG0040, YG0041, YG0042, YG0044, YG0045, YG0048 Full structure (ID 35890): CSDB ID(s): 60995, 125811, 143794 Molecule role (precursor of): N-glycan | Zufferey et al. 1995 PMID: 7588624 Dempski et al. 2004 DOI: 10.1016/j.abb.2004.07.017 Heesen et al. 1994 DOI: 10.1111/j.1432-1033.1994.tb19996.x |
| Synthesized dimer: DGlcpN1N(1-4)Asn Donor (ID 35899): Ac(1-2)?DGlcpN(1-4)[Ac(1-2)]?DGlcpN(1-P-P-1)Subst // Subst = dolichol Acceptor (ID 35897): x?Tyr(1-2)x?Asn(1-2)x?Leu(1-2)x?Thr(1-2)x?Ser(1-2)x?Val Status: evidence in vitro
Confirmation methods: in vitro (membrane preparation) ID: 15 Notes: Depletion of WBP1 correlates with a defect in transferring core oligosaccharides to carboxypeptidase Y and proteinase A in vivo | Organism (ID 9585,16389,16399,16400,16408,16409,16410): Saccharomyces cerevisiae X2180-1A, SS328, 45-C3, MA7-B, SS330, RH258-1C, MA11-D Full structure (ID 35900): CSDB ID(s): 40761, 45771, 45997 Molecule role (analog of): N-glycan | Heesen et al. 1992a DOI: 10.1002/j.1460-2075.1992.tb05265.x Heesen et al. 1992b DOI: 10.1002/yea.320081212 Silberstein et al. 1995b DOI: 10.1083/jcb.131.2.371 | |
| Synthesized dimer: DGlcpN1N(1-4)Asn Donor (ID 35899): Ac(1-2)?DGlcpN(1-4)[Ac(1-2)]?DGlcpN(1-P-P-1)Subst // Subst = dolichol Acceptor (ID 35889): PEP(1-2)x?Asn(1-2)PEP // PEP = protein fragment Status: semi-direct evidence in vivo
Confirmation methods: in vitro (membrane preparation); mutation ID: 16 Notes: Depletion of WBP1 correlates with a defect in transferring core oligosaccharides to carboxypeptidase Y and proteinase A in vivo | Organism (ID 9585,16389,16399,16400,16408,16409,16410): Saccharomyces cerevisiae X2180-1A, SS328, 45-C3, MA7-B, SS330, RH258-1C, MA11-D Full structure (ID 35901): CSDB ID(s): 40761, 41389, 45997 Molecule role (precursor of): N-glycan | Heesen et al. 1992a DOI: 10.1002/j.1460-2075.1992.tb05265.x Heesen et al. 1992b DOI: 10.1002/yea.320081212 | |
| Synthesized dimer: DGlcpN1N(1-4)Asn Donor (ID 35899): Ac(1-2)?DGlcpN(1-4)[Ac(1-2)]?DGlcpN(1-P-P-1)Subst // Subst = dolichol Acceptor (ID 35902): Bz(7C-7)x?Phe(1-2)x?Asn(1-2)x?Leu(1-2)x?Thr(1-1)Me Status: evidence in vitro
Confirmation methods: in vitro (purified protein); in vitro (inhibition) ID: 17 Notes: Wbp1p is a donor substrate-recognizing subunit. Wbp1p is associated with catalysis and the binding of the dolichylpyrophosphoryl oligosaccharide substrate in the transferase reaction. | Organism (ID 16411): Saccharomyces cerevisiae PRY46 Full structure (ID 35903): CSDB ID(s): 40761, 45771, 45997 Molecule role (analog of): N-glycan | Li et al. 2008 DOI: 10.1016/j.str.2007.12.013 Pathak et al. 1995b DOI: 10.1021/bi00013a005 | |
| Synthesized dimer: DGlcpN1N(1-4)Asn Donor (ID 35888): ?DGlcp(1-2)?DGlcp(1-3)?DGlcp(1-3)aDManp(1-2)aDManp(1-2)aDManp(1-3)[aDManp(1-2)aDManp(1-3)[aDManp(1-2)aDManp(1-6)]aDManp(1-6)]bDManp(1-4)[Ac(1-2)]bDGlcpN(1-4)[Ac(1-2)]?DGlcpN(1-P-P-1)Subst // Subst = dolichol Acceptor (ID 35891): Ac(1-2)x?Asn(1-2)[Bz(7C-7)]x?Phe(1-2)x?Thr(1-1)NH2 Status: evidence in vitro
Confirmation methods: mutation; in vitro (membrane preparation) ID: 18 Notes: Transmembrane domain of Wbp1p may mediate its association with the other subunits | Organism (ID 16396,16398,16412): Saccharomyces cerevisiae N60Q, W303, N332Q Full structure (ID 35892): CSDB ID(s): 60995, 125811, 143794 Molecule role (analog of): N-glycan | Li et al. 2008 DOI: 10.1016/j.str.2007.12.013 Li et al. 2005 DOI: 10.1074/jbc.M410969200 Li et al. 2003 DOI: 10.1021/bi034832w Hauptmann et al. 2006 DOI: 10.1111/j.1365-2958.2005.04981.x | |
| Enzyme name: Swp1p UniProt ID: Q02795* Gene name: SWP1 Gene GenBank ID: 855180* | Synthesized dimer: DGlcpN1N(1-4)Asn Donor (ID 35904): ?DGlcp(1-2)?DGlcp(1-3)?DGlcp(1-3)aDManp(1-2)aDManp(1-2)aDManp(1-3)[aDManp(1-2)aDManp(1-3)[aDManp(1-2)aDManp(1-6)]aDManp(1-6)]bDManp(1-4)[Ac(1-2)]bDGlcpN(1-4)[Ac(1-2)]?DGlcpN(1-P-P-1)LIP Acceptor (ID 35889): PEP(1-2)x?Asn(1-2)PEP // PEP = protein fragment Status: indirect evidence in vivo
Confirmation methods: mutation; overexpression ID: 19 Notes: OT enzyme complex comprises nine integral membrane proteins, five of which are essential for catalysis | Organism (ID 9585,16389,16399,16400,16401,16408,16413,16414,16415): Saccharomyces cerevisiae X2180-1A, SS328, 45-C3, MA7-B, MA9-D, SS330, ATH1, ATH7, ATH8 Full structure (ID 35890): CSDB ID(s): 60995, 125811, 143794 Molecule role (precursor of): N-glycan | Zufferey et al. 1995 PMID: 7588624 Dempski et al. 2004 DOI: 10.1016/j.abb.2004.07.017 Heesen et al. 1993 DOI: 10.1002/j.1460-2075.1993.tb05654.x |
| Synthesized dimer: DGlcpN1N(1-4)Asn Donor (ID 35899): Ac(1-2)?DGlcpN(1-4)[Ac(1-2)]?DGlcpN(1-P-P-1)Subst // Subst = dolichol Acceptor (ID 35897): x?Tyr(1-2)x?Asn(1-2)x?Leu(1-2)x?Thr(1-2)x?Ser(1-2)x?Val Status: evidence in vitro
Confirmation methods: in vitro (membrane preparation) ID: 20 Notes: Depletion of Swp1p results in reduced N-oligosaccharyl transferase activity in vivo and in vitro | Organism (ID 9585,16389,16399,16400,16401,16408,16413,16414,16415): Saccharomyces cerevisiae X2180-1A, SS328, 45-C3, MA7-B, MA9-D, SS330, ATH1, ATH7, ATH8 Full structure (ID 35900): CSDB ID(s): 40761, 45771, 45997 Molecule role (analog of): N-glycan | Heesen et al. 1993 DOI: 10.1002/j.1460-2075.1993.tb05654.x | |
| Synthesized dimer: DGlcpN1N(1-4)Asn Donor (ID 35904): ?DGlcp(1-2)?DGlcp(1-3)?DGlcp(1-3)aDManp(1-2)aDManp(1-2)aDManp(1-3)[aDManp(1-2)aDManp(1-3)[aDManp(1-2)aDManp(1-6)]aDManp(1-6)]bDManp(1-4)[Ac(1-2)]bDGlcpN(1-4)[Ac(1-2)]?DGlcpN(1-P-P-1)LIP Acceptor (ID 35891): Ac(1-2)x?Asn(1-2)[Bz(7C-7)]x?Phe(1-2)x?Thr(1-1)NH2 Status: evidence in vitro
Confirmation methods: in vitro (membrane preparation) ID: 21 Notes: The yeast OT contains nine integral membrane proteins, namely Ost1p–Ost6p, Stt3p, Swp1p, and Wbp1p. OT physically associates with translocon and ribosome, forming an efficient three-machine assembly line for protein translation, translocation, and N-glycosylation | Organism (ID 16398,16416,16417,16418,16419,16420): Saccharomyces cerevisiae W303, LY510, LY511, LY512, LY513, LY514 Full structure (ID 35892): CSDB ID(s): 60995, 125811, 143794 Molecule role (analog of): N-glycan | Li et al. 2008 DOI: 10.1016/j.str.2007.12.013 Dempski et al. 2004 DOI: 10.1016/j.abb.2004.07.017 | |
| Enzyme name: Ost1p UniProt ID: P41543* Gene name: OST1/NLT1 Gene GenBank ID: 853455* | Synthesized dimer: DGlcpN1N(1-4)Asn Donor (ID 35905): aDGlcp(1-2)aDGlcp(1-3)aDGlcp(1-3)aDManp(1-2)aDManp(1-2)aDManp(1-3)[aDManp(1-2)aDManp(1-3)[aDManp(1-2)aDManp(1-6)]aDManp(1-6)]bDManp(1-4)[Ac(1-2)]bDGlcpN(1-4)[Ac(1-2)]?DGlcpN(1-P-P-1)Subst // Subst = dolichol Acceptor (ID 35891): Ac(1-2)x?Asn(1-2)[Bz(7C-7)]x?Phe(1-2)x?Thr(1-1)NH2 Status: evidence in vitro
Confirmation methods: mutation; in vitro (membrane preparation) ID: 22 Notes: The 125I-labeled Asn-Bpa-Thr peptide served as a substrate for OST and was bound to Ost1p being part of the OST complex. Ost1p is acceptor substrate-recognizing subunit of OT | Organism (ID 13014,16398,16421,16422,16423,16424,16425,16426,16427,16428,16429,16430,16431): Saccharomyces cerevisiae W303-1a, W303, QYY101, QYY102, QYY103, QYY104, RGY330, N99Q, N217Q, N336Q, N400Q, QYY500, QYY501 Full structure (ID 35906): CSDB ID(s): 60995, 125811, 143794 Molecule role (analog of): N-glycan | Li et al. 2008 DOI: 10.1016/j.str.2007.12.013 Li et al. 2005 DOI: 10.1074/jbc.M410969200 Dempski et al. 2004 DOI: 10.1016/j.abb.2004.07.017 Pathak et al. 1995b DOI: 10.1021/bi00013a005 Yan et al. 1999 DOI: 10.1074/jbc.274.8.5021 Pathak et al. 1997 DOI: 10.1006/abbi.1996.9812 Pathak et al. 1995a DOI: 10.1016/0014-5793(95)00253-6 Yan et al. 2002b DOI: 10.1073 pnas.212637999 |
| Synthesized dimer: DGlcpN1N(1-4)Asn Donor (ID 35905): aDGlcp(1-2)aDGlcp(1-3)aDGlcp(1-3)aDManp(1-2)aDManp(1-2)aDManp(1-3)[aDManp(1-2)aDManp(1-3)[aDManp(1-2)aDManp(1-6)]aDManp(1-6)]bDManp(1-4)[Ac(1-2)]bDGlcpN(1-4)[Ac(1-2)]?DGlcpN(1-P-P-1)Subst // Subst = dolichol Acceptor (ID 35907): Ac(1-2)x?Asn(1-2)x?Tyr(1-2)x?Thr(1-1)NH2 Status: evidence in vitro
Confirmation methods: in vitro (membrane preparation) ID: 23 Notes: Ost1p is acceptor substrate-recognizing subunit of OT. Ost1 protein is essential for vegetative growth of yeast | Organism (ID 16432,16433,16434,16435,16436): Saccharomyces cerevisiae PRY238, RGY116, RGY117, RGY 101, RGY 103 Full structure (ID 35908): CSDB ID(s): 60995, 125811, 143794 Molecule role (analog of): N-glycan | Silberstein et al. 1995a DOI: 10.1083/jcb.128.4.525 | |
| Synthesized dimer: DGlcpN1N(1-4)Asn Donor (ID 35905): aDGlcp(1-2)aDGlcp(1-3)aDGlcp(1-3)aDManp(1-2)aDManp(1-2)aDManp(1-3)[aDManp(1-2)aDManp(1-3)[aDManp(1-2)aDManp(1-6)]aDManp(1-6)]bDManp(1-4)[Ac(1-2)]bDGlcpN(1-4)[Ac(1-2)]?DGlcpN(1-P-P-1)Subst // Subst = dolichol Acceptor (ID 35909): PEP(1-2)x?Asn(1-2)PEP // PEP = carboxypeptidase Y (CPY) and dipeptidyl aminopeptidase B (DPAP B) fragments Status: indirect evidence in vivo
Confirmation methods: mutation ID: 24 Notes: Ost1p is acceptor substrate-recognizing subunit of OT. Ost1 protein is essential for vegetative growth of yeast | Organism (ID 16432,16433,16434,16435,16436): Saccharomyces cerevisiae PRY238, RGY116, RGY117, RGY 101, RGY 103 Full structure (ID 35910): CSDB ID(s): 60995, 125811, 143794 Molecule role (analog of): N-glycan | ||
| Enzyme name: Ost2p UniProt ID: P46964* Gene name: OST2 Gene GenBank ID: 854270* | Synthesized dimer: DGlcpN1N(1-4)Asn Donor (ID 35905): aDGlcp(1-2)aDGlcp(1-3)aDGlcp(1-3)aDManp(1-2)aDManp(1-2)aDManp(1-3)[aDManp(1-2)aDManp(1-3)[aDManp(1-2)aDManp(1-6)]aDManp(1-6)]bDManp(1-4)[Ac(1-2)]bDGlcpN(1-4)[Ac(1-2)]?DGlcpN(1-P-P-1)Subst // Subst = dolichol Acceptor (ID 35907): Ac(1-2)x?Asn(1-2)x?Tyr(1-2)x?Thr(1-1)NH2 Status: evidence in vitro
Confirmation methods: mutation; overexpression; in vitro (membrane preparation) ID: 25 Notes: Overexpression of the Ost2 protein increases in vivo and in vitro oligosaccharyltransferase activity in a strain with mutated wbp1. Defects in the Ost2 protein cause pleiotropic underglycosylation of soluble and membrane-bound glycoproteins. Microsomal membranes isolated from ost2 mutant yeast show marked reductions in the in vitro transfer of high mannose oligosaccharide from exogenous lipid-linked oligosaccharide to a glycosylation site acceptor tripeptide. | Organism (ID 16432,16437,16438,16439,16440,16441): Saccharomyces cerevisiae PRY238, YPH274, RGY202, RGY203, RGY207, RGY208 Full structure (ID 35908): CSDB ID(s): 60995, 125811, 143794 Molecule role (analog of): N-glycan | Silberstein et al. 1995b DOI: 10.1083/jcb.131.2.371 |
| Synthesized dimer: DGlcpN1N(1-4)Asn Donor (ID 35905): aDGlcp(1-2)aDGlcp(1-3)aDGlcp(1-3)aDManp(1-2)aDManp(1-2)aDManp(1-3)[aDManp(1-2)aDManp(1-3)[aDManp(1-2)aDManp(1-6)]aDManp(1-6)]bDManp(1-4)[Ac(1-2)]bDGlcpN(1-4)[Ac(1-2)]?DGlcpN(1-P-P-1)Subst // Subst = dolichol Acceptor (ID 35911): PEP(1-2)x?Asn(1-2)PEP // PEP = carboxypeptidase Y (CPY) fragments Status: indirect evidence in vivo
Confirmation methods: mutation ID: 26 Notes: Overexpression of the Ost2 protein increases in vivo and in vitro oligosaccharyltransferase activity in a strain with mutated wbp1. Defects in the Ost2 protein cause pleiotropic underglycosylation of soluble and membrane-bound glycoproteins. Microsomal membranes isolated from ost2 mutant yeast show marked reductions in the in vitro transfer of high mannose oligosaccharide from exogenous lipid-linked oligosaccharide to a glycosylation site acceptor tripeptide. | Organism (ID 9827,16432,16437,16438,16439,16440,16441): Saccharomyces cerevisiae S288C, PRY238, YPH274, RGY202, RGY203, RGY207, RGY208 Expressed in: E. coli Full structure (ID 35912): CSDB ID(s): 60995, 125811, 143794 Molecule role (analog of): N-glycan | Silberstein et al. 1995b DOI: 10.1083/jcb.131.2.371 Hauptmann et al. 2006 DOI: 10.1111/j.1365-2958.2005.04981.x Sugiura et al. 2006 DOI: 10.1271/bbb.70.1234 | |
| Enzyme name: Ost3p UniProt ID: P48439* Gene name: OST3 Gene GenBank ID: 854252* | Synthesized dimer: DGlcpN1N(1-4)Asn Donor (ID 35905): aDGlcp(1-2)aDGlcp(1-3)aDGlcp(1-3)aDManp(1-2)aDManp(1-2)aDManp(1-3)[aDManp(1-2)aDManp(1-3)[aDManp(1-2)aDManp(1-6)]aDManp(1-6)]bDManp(1-4)[Ac(1-2)]bDGlcpN(1-4)[Ac(1-2)]?DGlcpN(1-P-P-1)Subst // Subst = dolichol Acceptor (ID 35913): Ac(1-2)x?Asn(1-2)x?Tyr(1-2)x?Thr Status: evidence in vitro
Confirmation methods: in vitro (membrane preparation) ID: 27 Notes: Loss of Ost3p reduces the in vivo and in vitro activity of the oligosaccharyltransferase. Ost3p and Ost6p can in part displace each other in the complex when overexpressed, suggesting their regulatory roles and a dynamic regulation of the complex formation. | Organism (ID 16432,16437,16442,16443,16444,16445,16446,16447,16448,16449,16450,16451): Saccharomyces cerevisiae PRY238, YPH274, RGY301, RGY302, RGY311, RGY312, RGY313, RGY314, RGY322, RGY323, RGY121, PRY98 Full structure (ID 35914): CSDB ID(s): 60995, 125811, 143794 Molecule role (analog of): N-glycan | Karaoglu et al. 1995 DOI: 10.1083/jcb.130.3.567 Schulz et al. 2009a DOI: 10.1074/mcp.M800219-MCP200 Schulz et al. 2009b DOI: 10.1073 pnas.0812515106 Schwarz et al. 2005 DOI: 10.1016/j.febslet.2005.10.063 |
| Synthesized dimer: DGlcpN1N(1-4)Asn Donor (ID 35905): aDGlcp(1-2)aDGlcp(1-3)aDGlcp(1-3)aDManp(1-2)aDManp(1-2)aDManp(1-3)[aDManp(1-2)aDManp(1-3)[aDManp(1-2)aDManp(1-6)]aDManp(1-6)]bDManp(1-4)[Ac(1-2)]bDGlcpN(1-4)[Ac(1-2)]?DGlcpN(1-P-P-1)Subst // Subst = dolichol Acceptor (ID 35915): PEP(1-2)x?Asn(1-2)PEP // PEP = carboxypeptidase Y (CPY) and dipeptidyl aminopeptidase B (DPAP B) Status: indirect evidence in vivo
Confirmation methods: mutation; supplementation; double mutation ID: 28 Notes: Loss of Ost3p reduces the in vivo and in vitro activity of the oligosaccharyltransferase. Ost3p and Ost6p can in part displace each other in the complex when overexpressed, suggesting their regulatory roles and a dynamic regulation of the complex formation. | Organism (ID 16432,16437,16442,16443,16444,16445,16446,16447,16448,16449,16450,16451): Saccharomyces cerevisiae PRY238, YPH274, RGY301, RGY302, RGY311, RGY312, RGY313, RGY314, RGY322, RGY323, RGY121, PRY98 Full structure (ID 35910): CSDB ID(s): 60995, 125811, 143794 Molecule role (analog of): N-glycan | Karaoglu et al. 1995 DOI: 10.1083/jcb.130.3.567 | |
| Synthesized dimer: DGlcpN1N(1-4)Asn Donor (ID 35905): aDGlcp(1-2)aDGlcp(1-3)aDGlcp(1-3)aDManp(1-2)aDManp(1-2)aDManp(1-3)[aDManp(1-2)aDManp(1-3)[aDManp(1-2)aDManp(1-6)]aDManp(1-6)]bDManp(1-4)[Ac(1-2)]bDGlcpN(1-4)[Ac(1-2)]?DGlcpN(1-P-P-1)Subst // Subst = dolichol Acceptor (ID 35916): Ac(1-2)x?Tyr(1-2)x?Asn(1-2)x?Leu(1-2)x?Thr(1-2)x?Ser(1-2)x?Val Status: evidence in vitro
Confirmation methods: mutation; in vitro (membrane preparation); overexpression ID: 29 Notes: Ost3p and Ost6p are not absolutely required for OTase activity, but modulate the affinity of the enzyme toward different protein substrates. Ost3p and Ost6p are not assembled in the same complex but form two different complexes. | Organism (ID 16389,16408,16452,16453,16454,16455,16456,16457,16458,16459): Saccharomyces cerevisiae SS328, SS330, YG191, YG889, W303-1A, MH272-1da, MB134-1a, RKY327, RKY346, RKY348 Full structure (ID 35917): CSDB ID(s): 60995, 125811, 143794 Molecule role (analog of): N-glycan | Spirig et al. 2005 DOI: 10.1093/glycob/cwj025 Pasikowska et al. 2012 DOI: 10.1093/glycob/cws068 Knauer et al. 1999 DOI: 10.1074/jbc.274.24.17249 | |
| Synthesized dimer: DGlcpN1N(1-4)Asn Donor (ID 35905): aDGlcp(1-2)aDGlcp(1-3)aDGlcp(1-3)aDManp(1-2)aDManp(1-2)aDManp(1-3)[aDManp(1-2)aDManp(1-3)[aDManp(1-2)aDManp(1-6)]aDManp(1-6)]bDManp(1-4)[Ac(1-2)]bDGlcpN(1-4)[Ac(1-2)]?DGlcpN(1-P-P-1)Subst // Subst = dolichol Acceptor (ID 35918): PEP(1-2)x?Asn(1-2)PEP // PEP = dipeptidyl aminopeptidase B (DPAP B) fragments Status: indirect evidence in vivo
Confirmation methods: mutation ID: 30 Notes: Ost3p and Ost6p are not absolutely required for OTase activity, but modulate the affinity of the enzyme toward different protein substrates. Ost3p and Ost6p are not assembled in the same complex but form two different complexes. | Organism (ID 9927,16389,16452,16453,16460,16461): Saccharomyces cerevisiae SEY6210, SS328, YG191, YG889, JHY1, MLY67 Full structure (ID 35919): CSDB ID(s): 60995, 125811, 143794 Molecule role (precursor of): N-glycan | Spirig et al. 2005 DOI: 10.1093/glycob/cwj025 Zatorska et al. 2017 DOI: 10.3390/ijms18061226 | |
| Enzyme name: Ost4p UniProt ID: Q99380* Gene name: OST4 Gene GenBank ID: 851366* | Synthesized dimer: DGlcpN1N(1-4)Asn Donor (ID 35905): aDGlcp(1-2)aDGlcp(1-3)aDGlcp(1-3)aDManp(1-2)aDManp(1-2)aDManp(1-3)[aDManp(1-2)aDManp(1-3)[aDManp(1-2)aDManp(1-6)]aDManp(1-6)]bDManp(1-4)[Ac(1-2)]bDGlcpN(1-4)[Ac(1-2)]?DGlcpN(1-P-P-1)Subst // Subst = dolichol Acceptor (ID 35891): Ac(1-2)x?Asn(1-2)[Bz(7C-7)]x?Phe(1-2)x?Thr(1-1)NH2 Status: evidence in vitro
Confirmation methods: mutation; in vitro (crude extract) ID: 31 Notes: Ost4p is a small membrane protein acting as a ‘‘bridge molecule’’ that holds Ost3p and Stt3p together, thereby stabilizing the whole OT complex in the ER membrane. | Organism (ID 16462): Saccharomyces cerevisiae JCY11 Full structure (ID 35906): CSDB ID(s): 60995, 125811, 143794 Molecule role (analog of): N-glycan | Kim et al. 2000 DOI: 10.1073/pnas.040556797 Kim et al. 2003 DOI: 10.1073 pnas.1332735100 |
| Synthesized dimer: DGlcpN1N(1-4)Asn Donor (ID 35905): aDGlcp(1-2)aDGlcp(1-3)aDGlcp(1-3)aDManp(1-2)aDManp(1-2)aDManp(1-3)[aDManp(1-2)aDManp(1-3)[aDManp(1-2)aDManp(1-6)]aDManp(1-6)]bDManp(1-4)[Ac(1-2)]bDGlcpN(1-4)[Ac(1-2)]?DGlcpN(1-P-P-1)Subst // Subst = dolichol Acceptor (ID 35920): Subst2(1-2)x?Asn(1-2)[Subst(7-6)]x?Lys(1-2)x?Thr(1-1)NH2 // Subst = p-azidobenzoic acid = SMILES C1=CC(=CC=C1{7}C(=O)O)N=[N+]=[N-]; Subst2 = 125I Bolton-Hunter reagent = SMILES N{1}C(=O)CCC2=CC=C(C(I)=C2)O Status: evidence in vitro
Confirmation methods: in vitro (crude extract) ID: 32 Notes: Deletion of the OST4 gene greatly diminishes OTase activity but does not abolish it. Ost4p, the smallest subunit, bridges the catalytic subunit Stt3p with Ost3p | Organism (ID 16463,16464,16465): Saccharomyces cerevisiae MCY1094, NDY17.4, NDY1.4 Full structure (ID 35921): CSDB ID(s): 60995, 125811, 143794 Molecule role (analog of): N-glycan | Chi et al. 1996 DOI: 10.1074/jbc.271.6.3132 Kumar et al. 2012 DOI: 10.1002/bip.22028 | |
| Synthesized dimer: DGlcpN1N(1-4)Asn Donor (ID 35905): aDGlcp(1-2)aDGlcp(1-3)aDGlcp(1-3)aDManp(1-2)aDManp(1-2)aDManp(1-3)[aDManp(1-2)aDManp(1-3)[aDManp(1-2)aDManp(1-6)]aDManp(1-6)]bDManp(1-4)[Ac(1-2)]bDGlcpN(1-4)[Ac(1-2)]?DGlcpN(1-P-P-1)Subst // Subst = dolichol Acceptor (ID 35922): PEP(1-2)x?Asn(1-2)PEP // PEP = carboxypeptidase Y (CPY) fragment Status: indirect evidence in vivo
Confirmation methods: mutation ID: 33 Notes: Deletion of the OST4 gene greatly diminishes OTase activity but does not abolish it. Ost4p, the smallest subunit, bridges the catalytic subunit Stt3p with Ost3p | Organism (ID 16463,16464,16465): Saccharomyces cerevisiae MCY1094, NDY17.4, NDY1.4 Full structure (ID 35923): CSDB ID(s): 60995, 125811, 143794 Molecule role (precursor of): N-glycan | ||
| Enzyme name: Ost5p UniProt ID: Q92316* Gene name: OST5 Gene GenBank ID: 852625* | Synthesized dimer: DGlcpN1N(1-4)Asn Donor (ID 35924): aDGlcp(1-2)aDGlcp(1-3)aDGlcp(1-3)aDManp(1-2)aDManp(1-2)aDManp(1-3)[aDManp(1-2)aDManp(1-3)[aDManp(1-2)aDManp(1-6)]aDManp(1-6)]bDManp(1-4)[Ac(1-2)]bDGlcpN(1-4)[Ac(1-2)]?DGlcpN(1-P-P-1)LIP Acceptor (ID 35907): Ac(1-2)x?Asn(1-2)x?Tyr(1-2)x?Thr(1-1)NH2 Status: evidence in vitro
Confirmation methods: in vitro (membrane preparation) ID: 34 Notes: OST5 protein is not essential for growth but its depletion results in a reduced OST activity. Suppression of an ost1 mutation by overexpression of OST5 indicates that this small membrane protein directly interacts with other OSTcomponents. | Organism (ID 16389,16408,16466,16467,16468,16469,16470,16471,16472,16473,16474,16475,16476,16477,16478): Saccharomyces cerevisiae SS328, SS330, YG175, YG234, YG250, YG251, YG356, YG357, YG358, YG359, YG434, YG435, YG508, YG511, YG513 Full structure (ID 35908): CSDB ID(s): 60995, 125811, 143794 Molecule role (analog of): N-glycan | Reiss et al. 1997 DOI: 10.1093/emboj/16.6.1164 |
| Synthesized dimer: DGlcpN1N(1-4)Asn Donor (ID 35924): aDGlcp(1-2)aDGlcp(1-3)aDGlcp(1-3)aDManp(1-2)aDManp(1-2)aDManp(1-3)[aDManp(1-2)aDManp(1-3)[aDManp(1-2)aDManp(1-6)]aDManp(1-6)]bDManp(1-4)[Ac(1-2)]bDGlcpN(1-4)[Ac(1-2)]?DGlcpN(1-P-P-1)LIP Acceptor (ID 35922): PEP(1-2)x?Asn(1-2)PEP // PEP = carboxypeptidase Y (CPY) fragment Status: indirect evidence in vivo
Confirmation methods: mutation; overexpression ID: 35 Notes: OST5 protein is not essential for growth but its depletion results in a reduced OST activity. Suppression of an ost1 mutation by overexpression of OST5 indicates that this small membrane protein directly interacts with other OSTcomponents. | Organism (ID 16389,16408,16466,16467,16468,16469,16470,16471,16472,16473,16474,16475,16476,16477,16478): Saccharomyces cerevisiae SS328, SS330, YG175, YG234, YG250, YG251, YG356, YG357, YG358, YG359, YG434, YG435, YG508, YG511, YG513 Full structure (ID 35923): CSDB ID(s): 60995, 125811, 143794 Molecule role (precursor of): N-glycan | ||
| Enzyme name: Ost6p UniProt ID: Q03723* Gene name: OST6 Gene GenBank ID: 854989* | Synthesized dimer: DGlcpN1N(1-4)Asn Donor (ID 35905): aDGlcp(1-2)aDGlcp(1-3)aDGlcp(1-3)aDManp(1-2)aDManp(1-2)aDManp(1-3)[aDManp(1-2)aDManp(1-3)[aDManp(1-2)aDManp(1-6)]aDManp(1-6)]bDManp(1-4)[Ac(1-2)]bDGlcpN(1-4)[Ac(1-2)]?DGlcpN(1-P-P-1)Subst // Subst = dolichol Acceptor (ID 35916): Ac(1-2)x?Tyr(1-2)x?Asn(1-2)x?Leu(1-2)x?Thr(1-2)x?Ser(1-2)x?Val Status: evidence in vitro
Confirmation methods: in vitro (membrane preparation) ID: 36 Notes: Ost3p and Ost6p are not absolutely required for OTase activity, but modulate the affinity of the enzyme toward different protein substrates. Ost3p and Ost6p are not assembled in the same complex but form two different complexes. | Organism (ID 16389,16408,16453,16457,16458,16459,16479,16480): Saccharomyces cerevisiae SS328, SS330, YG889, RKY327, RKY346, RKY348, RKY325, SKY325 Full structure (ID 35917): CSDB ID(s): 60995, 125811, 143794 Molecule role (analog of): N-glycan | Schulz et al. 2009a DOI: 10.1074/mcp.M800219-MCP200 Schulz et al. 2009b DOI: 10.1073 pnas.0812515106 Schwarz et al. 2005 DOI: 10.1016/j.febslet.2005.10.063 Spirig et al. 2005 DOI: 10.1093/glycob/cwj025 Knauer et al. 1999 DOI: 10.1074/jbc.274.24.17249 |
| Synthesized dimer: DGlcpN1N(1-4)Asn Donor (ID 35905): aDGlcp(1-2)aDGlcp(1-3)aDGlcp(1-3)aDManp(1-2)aDManp(1-2)aDManp(1-3)[aDManp(1-2)aDManp(1-3)[aDManp(1-2)aDManp(1-6)]aDManp(1-6)]bDManp(1-4)[Ac(1-2)]bDGlcpN(1-4)[Ac(1-2)]?DGlcpN(1-P-P-1)Subst // Subst = dolichol Acceptor (ID 35922): PEP(1-2)x?Asn(1-2)PEP // PEP = carboxypeptidase Y (CPY) fragment Status: indirect evidence in vivo
Confirmation methods: mutation; overexpression ID: 37 Notes: Ost3p and Ost6p is not assembled in the same complex but form two different complexes | Organism (ID 16389,16408,16453,16457,16458,16479,16480): Saccharomyces cerevisiae SS328, SS330, YG889, RKY327, RKY346, RKY325, SKY325 Full structure (ID 35923): CSDB ID(s): 60995, 125811, 143794 Molecule role (precursor of): N-glycan | Schulz et al. 2009a DOI: 10.1074/mcp.M800219-MCP200 Schulz et al. 2009b DOI: 10.1073 pnas.0812515106 Schwarz et al. 2005 DOI: 10.1016/j.febslet.2005.10.063 Spirig et al. 2005 DOI: 10.1093/glycob/cwj025 | |
| Enzyme name: pmt1p UniProt ID: P33775* CAZy family: GT39 Gene name: PMT1 Gene GenBank ID: 851462* | Synthesized dimer: DManp(1-3)Ser Donor (ID 35925): ?DManp(1-P-1)Subst // Subst = dolichol Acceptor (ID 35926): Ac(1-2)x?Tyr(1-2)x?Asn(1-2)x?Pro(1-2)x?Thr(1-2)x?Ser(1-2)x?Val Status: evidence in vitro
Confirmation methods: in vitro (purified protein); in vitro (membrane preparation) ID: 38 Notes: Overexpression of both pmt1p and pmt2p resulted in increased mannosyltransferase activity in vitro. | Organism (ID 9927,12269,16481): Saccharomyces cerevisiae SEY6210, BY4743, SEY2101 Organ/tissue: E. coli Full structure (ID 35927): CSDB ID(s): 40828 Molecule role (analog of): O-glycan | Strahl-Bolsinger et al. 1993 PMID: 8367478 Gentzsch et al. 1995 DOI: 10.1016/0014-5793(95)01324-5 Goto et al. 1999 DOI: 10.1046/j.1432-1327.1999.00207.x Hendershot et al. 2002 DOI: 10.1016/S0003-2697(02)00059-3 |
| Synthesized dimer: DManp(1-3)Ser Donor (ID 35925): ?DManp(1-P-1)Subst // Subst = dolichol Acceptor (ID 35928): PEP(1-2)x?Ser(1-2)PEP // PEP = protein fragment Status: indirect evidence in vivo
Confirmation methods: expression in E. coli; mutation (in recombinant protein); overexpression ID: 39 Notes: Overexpression of both pmt1p and pmt2p resulted in increased mannosyltransferase activity in vitro. Pmt1 shows activity in glycosylation of endogenous protein Cts1p | Organism (ID 9927,12269,16481): Saccharomyces cerevisiae SEY6210, BY4743, SEY2101 Organ/tissue: E. coli Full structure (ID 35929): CSDB ID(s): 40792 Molecule role: O-glycan | Strahl-Bolsinger et al. 1993 PMID: 8367478 Gentzsch et al. 1995 DOI: 10.1016/0014-5793(95)01324-5 Goto et al. 1999 DOI: 10.1046/j.1432-1327.1999.00207.x Hendershot et al. 2002 DOI: 10.1016/S0003-2697(02)00059-3 Strahl-Bolsinger et al. 1999 DOI: 10.1074/jbc.274.13.9068 | |
| Synthesized dimer: DManp(1-3)Thr Donor (ID 35925): ?DManp(1-P-1)Subst // Subst = dolichol Acceptor (ID 35926): Ac(1-2)x?Tyr(1-2)x?Asn(1-2)x?Pro(1-2)x?Thr(1-2)x?Ser(1-2)x?Val Status: evidence in vitro
Confirmation methods: in vitro (purified protein); in vitro (membrane preparation) ID: 40 Notes: Overexpression of both pmt1p and pmt2p resulted in increased mannosyltransferase activity in vitro. | Organism (ID 9927,12269,16481): Saccharomyces cerevisiae SEY6210, BY4743, SEY2101 Organ/tissue: E. coli Full structure (ID 35930): CSDB ID(s): 43857 Molecule role (analog of): O-glycan | Strahl-Bolsinger et al. 1993 PMID: 8367478 Gentzsch et al. 1995 DOI: 10.1016/0014-5793(95)01324-5 Goto et al. 1999 DOI: 10.1046/j.1432-1327.1999.00207.x Hendershot et al. 2002 DOI: 10.1016/S0003-2697(02)00059-3 | |
| Synthesized dimer: DManp(1-3)Thr Donor (ID 35925): ?DManp(1-P-1)Subst // Subst = dolichol Acceptor (ID 35931): PEP(1-2)x?Thr(1-2)PEP // PEP = protein fragment Status: indirect evidence in vivo
Confirmation methods: expression in E. coli; mutation (in recombinant protein); overexpression ID: 41 Notes: Overexpression of both pmt1p and pmt2p resulted in increased mannosyltransferase activity in vitro. Pmt1 shows activity in glycosylation of endogenous protein Cts1p | Organism (ID 9927,12269,16481): Saccharomyces cerevisiae SEY6210, BY4743, SEY2101 Organ/tissue: E. coli Full structure (ID 35932): CSDB ID(s): 40793 Molecule role: O-glycan | Strahl-Bolsinger et al. 1993 PMID: 8367478 Gentzsch et al. 1995 DOI: 10.1016/0014-5793(95)01324-5 Goto et al. 1999 DOI: 10.1046/j.1432-1327.1999.00207.x Hendershot et al. 2002 DOI: 10.1016/S0003-2697(02)00059-3 Strahl-Bolsinger et al. 1999 DOI: 10.1074/jbc.274.13.9068 | |
| Synthesized dimer: DMan(1-3)Ser Donor (ID 35925): ?DManp(1-P-1)Subst // Subst = dolichol Acceptor (ID 35933): Ac(1-2)/x?Ser?(1-2)/n=4/x?Ser? Status: evidence in vitro
Confirmation methods: in vitro (microsomal membrane preparation); in vitro (purified protein) ID: 42 Notes: The exact position and degree of mannosylation is unknown. Overexpression of both pmt1p and pmt2p resulted in increased mannosyltransferase activity in vitro. | Organism (ID 9927): Saccharomyces cerevisiae SEY6210 Full structure (ID 35934): Molecule role (analog of): O-glycan | Gentzsch et al. 1995 DOI: 10.1016/0014-5793(95)01324-5 Gentzsch et al. 1997 DOI: 10.1093/glycob/7.4.481 Lommel et al. 2011 DOI: 10.1074/jbc.M111.281196 Immervoll et al. 1995 DOI: 10.1002/yea.320111403 Lussier et al. 1995b DOI: 10.1074/jbc.270.6.2770 | |
| Synthesized dimer: DManp(1-3)Ser Donor (ID 35925): ?DManp(1-P-1)Subst // Subst = dolichol Acceptor (ID 35926): Ac(1-2)x?Tyr(1-2)x?Asn(1-2)x?Pro(1-2)x?Thr(1-2)x?Ser(1-2)x?Val Status: evidence in vitro
Confirmation methods: in vitro (purified protein) ID: 43 Notes: mannosyltransferase activity of dolichyl-phosphate-D-mannose : protein 0-D-mannosyltransferase demonstrated in vitro using short peptides (100% relative activity) | Organism (ID 16482): Saccharomyces cerevisiae BYS 232-31-4 Full structure (ID 35927): CSDB ID(s): 43857 Molecule role (analog of): O-glycan | Strahl-Bolsinger et al. 1991 DOI: 10.1111/j.1432-1033.1991.tb15802.x | |
| Synthesized dimer: DManp(1-3)Thr Donor (ID 35925): ?DManp(1-P-1)Subst // Subst = dolichol Acceptor (ID 35926): Ac(1-2)x?Tyr(1-2)x?Asn(1-2)x?Pro(1-2)x?Thr(1-2)x?Ser(1-2)x?Val Status: evidence in vitro
Confirmation methods: in vitro (membrane preparation); in vitro (purified protein) ID: 44 Notes: mannosyltransferase activity of dolichyl-phosphate-D-mannose : protein 0-D-mannosyltransferase demonstrated in vitro using short peptides (100% relative activity). The deletion of the protein mannosyltransferase 1 gene (PMT1) of Saccharomyces cerevisiae results in viable cells. O-mannosylation of proteins is reduced to about half of the value in comparison to wild-type cells. | Organism (ID 9927,16481,16482,16483): Saccharomyces cerevisiae SEY6210, SEY2101, BYS 232-31-4, YSC-1 Full structure (ID 35930): CSDB ID(s): 43857 Molecule role (analog of): O-glycan | Lussier et al. 1995b DOI: 10.1074/jbc.270.6.2770 Strahl-Bolsinger et al. 1991 DOI: 10.1111/j.1432-1033.1991.tb15802.x Gentzsch et al. 1995b DOI: 10.1093/glycob/5.1.77 Dotson et al. 1995 DOI: 10.1006/abbi.1995.1103 Bourdineaud et al. 1998 DOI: 10.1046/j.1365-2958.1998.00660.x | |
| Synthesized dimer: DManp(1-3)Thr Donor (ID 35925): ?DManp(1-P-1)Subst // Subst = dolichol Acceptor (ID 35935): Ac(1-2)x?Tyr(1-2)x?Ala?(1-2)x?Thr(1-2)x?Ala?(1-2)x?Val(1-1)NH2 Status: evidence in vitro
Confirmation methods: in vitro (crude extract); in vitro (membrane preparation); mutation ID: 45 Notes: The transmembrane topology of Pmt1p is revealed | Organism (ID 9927,16460,16461,16484): Saccharomyces cerevisiae SEY6210, JHY1, MLY67, STY50 Full structure (ID 35936): CSDB ID(s): 43857 Molecule role (analog of): O-glycan | Strahl-Bolsinger et al. 1999 DOI: 10.1074/jbc.274.13.9068 Lommel et al. 2011 DOI: 10.1074/jbc.M111.281196 | |
| Synthesized dimer: DManp(1-3)Thr Donor (ID 35925): ?DManp(1-P-1)Subst // Subst = dolichol Acceptor (ID 35937): PEP(1-2)< Status: indirect evidence in vivo
Confirmation methods: mutation, overexpression ID: 46 Notes: Pmt1 and Pmt2 proteins are highly similar on the sequence, as well as the structural level and act as a complex | Organism (ID 9927,16460,16461): Saccharomyces cerevisiae SEY6210, JHY1, MLY67 Full structure (ID 35938): CSDB ID(s): 40792, 40793, 40828, 43857 Molecule role (precursor of): O-glycan | Zatorska et al. 2017 DOI: 10.3390/ijms18061226 Strahl-Bolsinger et al. 1999 DOI: 10.1074/jbc.274.13.9068 Gentzsch et al. 1997 DOI: 10.1093/glycob/7.4.481 Lommel et al. 2011 DOI: 10.1074/jbc.M111.281196 Girrbach et al. 2000 DOI: 10.1074/jbc.M001771200 Girrbach et al. 2003 DOI: 10.1074/jbc.M212582200 | |
| Synthesized dimer: DManp(1-3)Ser Donor (ID 35925): ?DManp(1-P-1)Subst // Subst = dolichol Acceptor (ID 35937): PEP(1-2)< Status: indirect evidence in vivo
Confirmation methods: mutation, overexpression ID: 47 Notes: Pmt1 and Pmt2 proteins are highly similar on the sequence, as well as the structural level and act as a complex | Organism (ID 9927,16460,16461): Saccharomyces cerevisiae SEY6210, JHY1, MLY67 Full structure (ID 35939): CSDB ID(s): 40792, 40793, 40828, 43857 Molecule role (precursor of): O-glycan | ||
| Synthesized dimer: DManp(1-3)Thr Donor (ID 35925): ?DManp(1-P-1)Subst // Subst = dolichol Acceptor (ID 35940): Ac(1-2)x?Tyr(1-2)x?Ala?(1-2)x?Thr(1-2)x?Ala?(1-2)x?Val(1-2)x?Lys(1-?)Subst // Subst = biotin = SMILES C1C2{8}C(C(S1)CCCCC(=O)O)N{10}C(=O)N2 Status: evidence in vitro
Confirmation methods: in vitro (membrane preparation); mutation ID: 48 Notes: Pmt1p forms a complex with Pmt2p that is required for maximum transferase activity | Organism (ID 9605): Saccharomyces cerevisiae Full structure (ID 35941): CSDB ID(s): 43857 Molecule role (analog of): O-glycan | Lommel et al. 2011 DOI: 10.1074/jbc.M111.281196 Loibl et al. 2014 DOI: 10.1074/jbc.M113.543116 Cui et al. 2015 DOI: 10.1007/s11357-015-9788-7 Abe et al. 2016 DOI: 10.1093/glycob/cww071 | |
| Synthesized dimer: DManp(1-3)Thr Donor (ID 35925): ?DManp(1-P-1)Subst // Subst = dolichol Acceptor (ID 35942): Subst(1-2)x?Tyr(1-2)x?Ala?(1-2)x?Thr(1-2)x?Ala?(1-2)x?Val(1-1)NH2 // Subst = biotin = SMILES C1C2C(C(S1)CCCC{1}C(=O)O)NC(=O)N2 Status: evidence in vitro
Confirmation methods: in vitro (membrane preparation); mutation ID: 49 Notes: Pmt1p forms a complex with Pmt2p that is required for maximum transferase activity | Organism (ID 9605): Saccharomyces cerevisiae Full structure (ID 35943): CSDB ID(s): 43857 Molecule role (analog of): O-glycan | ||
| Synthesized dimer: DManp(1-3)Thr Donor (ID 35925): ?DManp(1-P-1)Subst // Subst = dolichol Acceptor (ID 35935): Ac(1-2)x?Tyr(1-2)x?Ala?(1-2)x?Thr(1-2)x?Ala?(1-2)x?Val(1-1)NH2 Status: evidence in vitro
Confirmation methods: in vitro (membrane preparation); mutation ID: 50 Notes: Pmt1p forms a complex with Pmt2p that is required for maximum transferase activity | Organism (ID 9605): Saccharomyces cerevisiae Full structure (ID 35936): CSDB ID(s): 43857 Molecule role (analog of): O-glycan | ||
| Synthesized dimer: DManp(1-3)Ser Donor (ID 35925): ?DManp(1-P-1)Subst // Subst = dolichol Acceptor (ID 35916): Ac(1-2)x?Tyr(1-2)x?Asn(1-2)x?Leu(1-2)x?Thr(1-2)x?Ser(1-2)x?Val Status: evidence in vitro
Confirmation methods: in vitro (purified protein) ID: 51 Notes: mannosyltransferase activity of dolichyl-phosphate-D-mannose : protein O-D-mannosyltransferase demonstrated in vitro using short peptides (102% relative activity) | Organism (ID 16482): Saccharomyces cerevisiae BYS 232-31-4 Full structure (ID 35944): CSDB ID(s): 43857 Molecule role (analog of): O-glycan | Strahl-Bolsinger et al. 1991 DOI: 10.1111/j.1432-1033.1991.tb15802.x | |
| Synthesized dimer: DManp(1-3)Thr Donor (ID 35925): ?DManp(1-P-1)Subst // Subst = dolichol Acceptor (ID 35916): Ac(1-2)x?Tyr(1-2)x?Asn(1-2)x?Leu(1-2)x?Thr(1-2)x?Ser(1-2)x?Val Status: evidence in vitro
Confirmation methods: in vitro (purified protein) ID: 52 Notes: mannosyltransferase activity of dolichyl-phosphate-D-mannose : protein O-D-mannosyltransferase demonstrated in vitro using short peptides (102% relative activity) | Organism (ID 16482): Saccharomyces cerevisiae BYS 232-31-4 Full structure (ID 35945): CSDB ID(s): 43857 Molecule role (analog of): O-glycan | ||
| Synthesized dimer: DManp(1-3)Ser Donor (ID 35925): ?DManp(1-P-1)Subst // Subst = dolichol Acceptor (ID 35946): Ac(1-2)x?Tyr(1-2)x?Asn(1-2)xXGly(1-2)x?Thr(1-2)x?Ser(1-2)x?Val Status: evidence in vitro
Confirmation methods: in vitro (purified protein) ID: 53 Notes: mannosyltransferase activity of dolichyl-phosphate-D-mannose : protein O-D-mannosyltransferase demonstrated in vitro using short peptides (2% relative activity) | Organism (ID 16482): Saccharomyces cerevisiae BYS 232-31-4 Full structure (ID 35947): CSDB ID(s): 43857 Molecule role (analog of): O-glycan | ||
| Synthesized dimer: DManp(1-3)Thr Donor (ID 35925): ?DManp(1-P-1)Subst // Subst = dolichol Acceptor (ID 35946): Ac(1-2)x?Tyr(1-2)x?Asn(1-2)xXGly(1-2)x?Thr(1-2)x?Ser(1-2)x?Val Status: evidence in vitro
Confirmation methods: in vitro (purified protein) ID: 54 Notes: mannosyltransferase activity of dolichyl-phosphate-D-mannose : protein O-D-mannosyltransferase demonstrated in vitro using short peptides (2% relative activity) | Organism (ID 16482): Saccharomyces cerevisiae BYS 232-31-4 Full structure (ID 35948): CSDB ID(s): 43857 Molecule role (analog of): O-glycan | ||
| Synthesized dimer: DManp(1-3)Thr Donor (ID 35925): ?DManp(1-P-1)Subst // Subst = dolichol Acceptor (ID 35949): Ac(1-2)x?Lys(1-2)x?Pro(1-2)x?Thr(1-2)xXGly(1-2)x?Tyr Status: evidence in vitro
Confirmation methods: in vitro (purified protein) ID: 55 Notes: mannosyltransferase activity of dolichyl-phosphate-D-mannose : protein-O-D-mannosyltransferase demonstrated in vitro using short peptides (100% relative activity) | Organism (ID 16482): Saccharomyces cerevisiae BYS 232-31-4 Full structure (ID 35950): CSDB ID(s): 43857 Molecule role (analog of): O-glycan | ||
| Synthesized dimer: DManp(1-3)Thr Donor (ID 35925): ?DManp(1-P-1)Subst // Subst = dolichol Acceptor (ID 35951): Ac(1-2)x?Lys(1-2)xXGly(1-2)x?Thr(1-2)xXGly(1-2)x?Tyr Status: evidence in vitro
Confirmation methods: in vitro (purified protein) ID: 56 Notes: mannosyltransferase activity of dolichyl-phosphate-D-mannose : protein O-D-mannosyltransferase demonstrated in vitro using short peptides (2% relative activity) | Organism (ID 16482): Saccharomyces cerevisiae BYS 232-31-4 Full structure (ID 35952): CSDB ID(s): 43857 Molecule role (analog of): O-glycan | ||
| Synthesized dimer: DManp(1-3)Thr Donor (ID 35925): ?DManp(1-P-1)Subst // Subst = dolichol Acceptor (ID 35953): Ac(1-2)x?Lys(1-2)x?Pro(1-2)x?Thr(1-2)x?Glu(1-2)x?Tyr Status: evidence in vitro
Confirmation methods: in vitro (purified protein) ID: 57 Notes: mannosyltransferase activity of dolichyl-phosphate-D-mannose : protein O-D-mannosyltransferase demonstrated in vitro using short peptides (8% relative activity) | Organism (ID 16482): Saccharomyces cerevisiae BYS 232-31-4 Full structure (ID 35954): CSDB ID(s): 43857 Molecule role (analog of): O-glycan | ||
| Synthesized dimer: DManp(1-3)Thr Donor (ID 35925): ?DManp(1-P-1)Subst // Subst = dolichol Acceptor (ID 35955): Ac(1-2)x?Lys(1-2)x?Pro(1-2)x?Thr(1-2)x?Pro(1-2)x?Tyr Status: evidence in vitro
Confirmation methods: in vitro (purified protein) ID: 58 Notes: mannosyltransferase activity of dolichyl-phosphate-D-mannose : protein O-D-mannosyltransferase demonstrated in vitro using short peptides (43% relative activity) | Organism (ID 16482): Saccharomyces cerevisiae BYS 232-31-4 Full structure (ID 35956): CSDB ID(s): 43857 Molecule role (analog of): O-glycan | ||
| Synthesized dimer: DManp(1-3)Ser Donor (ID 35925): ?DManp(1-P-1)Subst // Subst = dolichol Acceptor (ID 35957): Ac(1-2)x?Lys(1-2)x?Pro(1-2)x?Ser(1-2)xXGly(1-2)x?Tyr Status: evidence in vitro
Confirmation methods: in vitro (purified protein) ID: 59 Notes: mannosyltransferase activity of dolichyl-phosphate-D-mannose : protein O-D-mannosyltransferase demonstrated in vitro using short peptides (30% relative activity) | Organism (ID 16482): Saccharomyces cerevisiae BYS 232-31-4 Full structure (ID 35958): CSDB ID(s): 43857 Molecule role (analog of): O-glycan | ||
| Synthesized dimer: DManp(1-3)Thr Donor (ID 35925): ?DManp(1-P-1)Subst // Subst = dolichol Acceptor (ID 35959): Ac(1-2)x?Lys(1-2)x?Leu(1-2)x?Thr(1-2)xXGly(1-2)x?Tyr Status: evidence in vitro
Confirmation methods: in vitro (purified protein) ID: 60 Notes: mannosyltransferase activity of dolichyl-phosphate-D-mannose : protein O-D-mannosyltransferase demonstrated in vitro using short peptides (9% relative activity) | Organism (ID 16482): Saccharomyces cerevisiae BYS 232-31-4 Full structure (ID 35960): CSDB ID(s): 43857 Molecule role (analog of): O-glycan | ||
| Synthesized dimer: DManp(1-3)Thr Donor (ID 35925): ?DManp(1-P-1)Subst // Subst = dolichol Acceptor (ID 35961): Ac(1-2)x?Ala?(1-2)x?Asn(1-2)x?Thr(1-2)x?Ser(1-2)x?Glu(1-2)x?Pro Status: evidence in vitro
Confirmation methods: in vitro (purified protein) ID: 61 Notes: mannosyltransferase activity of dolichyl-phosphate-D-mannose : protein O-D-mannosyltransferase demonstrated in vitro using short peptides (1% relative activity) | Organism (ID 16482): Saccharomyces cerevisiae BYS 232-31-4 Full structure (ID 35962): CSDB ID(s): 43857 Molecule role (analog of): O-glycan | ||
| Synthesized dimer: DManp(1-3)Ser Donor (ID 35925): ?DManp(1-P-1)Subst // Subst = dolichol Acceptor (ID 35961): Ac(1-2)x?Ala?(1-2)x?Asn(1-2)x?Thr(1-2)x?Ser(1-2)x?Glu(1-2)x?Pro Status: evidence in vitro
Confirmation methods: in vitro (purified protein) ID: 62 Notes: mannosyltransferase activity of dolichyl-phosphate-D-mannose : protein O-D-mannosyltransferase demonstrated in vitro using short peptides (1% relative activity) | Organism (ID 16482): Saccharomyces cerevisiae BYS 232-31-4 Full structure (ID 35963): CSDB ID(s): 43857 Molecule role (analog of): O-glycan | ||
| Synthesized dimer: DManp(1-3)Thr Donor (ID 35925): ?DManp(1-P-1)Subst // Subst = dolichol Acceptor (ID 35964): Ac(1-2)x?Pro(1-2)x?Tyr(1-2)x?Thr(1-2)x?Val Status: evidence in vitro
Confirmation methods: in vitro (purified protein) ID: 63 Notes: mannosyltransferase activity of dolichyl-phosphate-D-mannose : protein O-D-mannosyltransferase demonstrated in vitro using short peptides (117% relative activity) | Organism (ID 16482): Saccharomyces cerevisiae BYS 232-31-4 Full structure (ID 35965): CSDB ID(s): 43857 Molecule role (analog of): O-glycan | ||
| Synthesized dimer: DManp(1-3)Thr Donor (ID 35925): ?DManp(1-P-1)Subst // Subst = dolichol Acceptor (ID 35966): Ac(1-2)x?Pro(1-2)x?Thr(1-2)x?Val Status: evidence in vitro
Confirmation methods: in vitro (purified protein) ID: 64 Notes: mannosyltransferase activity of dolichyl-phosphate-D-mannose : protein O-D-mannosyltransferase demonstrated in vitro using short peptides (81% relative activity) | Organism (ID 16482): Saccharomyces cerevisiae BYS 232-31-4 Full structure (ID 35967): CSDB ID(s): 43857 Molecule role (analog of): O-glycan | ||
| Synthesized dimer: DManp(1-3)Thr Donor (ID 35925): ?DManp(1-P-1)Subst // Subst = dolichol Acceptor (ID 35968): Ac(1-2)x?Tyr(1-2)x?Ala?(1-2)x?Thr(1-2)x?Ala?(1-2)x?Val Status: evidence in vitro
Confirmation methods: in vitro (crude extract); mutation (in recombinant protein); in vitro (membrane preparation) ID: 65 Notes: Pmt1p and Pmt2p together partcipate in addition of D-mannose to short peptides in vitro | Organism (ID 9927,16481,16485): Saccharomyces cerevisiae SEY6210, SEY2101, SEY6211 Full structure (ID 35969): CSDB ID(s): 43857 Molecule role (analog of): O-glycan | Gentzsch et al. 1995 DOI: 10.1016/0014-5793(95)01324-5 Lommel et al. 2011 DOI: 10.1074/jbc.M111.281196 Gentzsch et al. 1995b DOI: 10.1093/glycob/5.1.77 Dotson et al. 1995 DOI: 10.1006/abbi.1995.1103 Gentzsch et al. 1996 PMID: 8918452 | |
| Synthesized dimer: DManp(1-3)Ser Donor (ID 35925): ?DManp(1-P-1)Subst // Subst = dolichol Acceptor (ID 35970): Ac(1-2)/x?Ser(1-2)/n=4/x?Ser Status: evidence in vitro
Confirmation methods: in vitro (membrane preparation), mutation ID: 66 Notes: Pmt1p and Pmt2p together partcipate in addition of D-mannose to short peptides in vitro | Organism (ID 9927): Saccharomyces cerevisiae SEY6210 Full structure (ID 35971): CSDB ID(s): 40828 Molecule role (analog of): O-glycan | Gentzsch et al. 1995 DOI: 10.1016/0014-5793(95)01324-5 | |
| Synthesized dimer: DManp(1-3)Ser Donor (ID 35925): ?DManp(1-P-1)Subst // Subst = dolichol Acceptor (ID 35972): Ac(1-2)x?Tyr(1-2)x?Ala?(1-2)x?Ser(1-2)x?Ala?(1-2)x?Val Status: evidence in vitro
Confirmation methods: in vitro (membrane preparation) ID: 67 Notes: Using the pentapeptides YATAV and YASAV, it could be shown that the Pmt1p-deficient extract glycosylates threonine more efficiently than serine; thus the extent to which the hydroxy amino acid is used as acceptor depends on its neighbourhoodю | Organism (ID 16481): Saccharomyces cerevisiae SEY2101 Full structure (ID 35973): CSDB ID(s): 40828 Molecule role (analog of): O-glycan | Lommel et al. 2011 DOI: 10.1074/jbc.M111.281196 Gentzsch et al. 1995b DOI: 10.1093/glycob/5.1.77 Goder et al. 2011 DOI: 10.1242/jcs.072181 | |
| Synthesized dimer: DManp(1-?)Thr Donor (ID 35925): ?DManp(1-P-1)Subst // Subst = dolichol Acceptor (ID 35974): x?Arg(1-2)x?Ser(1-2)x?Pro(1-2)x?Ser(1-2)x?Pro(1-2)x?Ser(1-2)x?Thr(1-2)x?Gln Status: evidence in vitro
Confirmation methods: in vitro (purified protein) ID: 68 Notes: In peptide 4-11 only Thr10 was used as acceptor site | Organism (ID 16482): Saccharomyces cerevisiae BYS 232-31-4 Full structure (ID 35975): CSDB ID(s): 43857 Molecule role (analog of): O-glycan | Strahl-Bolsinger et al. 1991 DOI: 10.1111/j.1432-1033.1991.tb15802.x Lorenz et al. 1992 DOI: 10.1111/j.1432-1033.1992.tb16886.x | |
| Synthesized dimer: DManp(1-?)Ser Donor (ID 35925): ?DManp(1-P-1)Subst // Subst = dolichol Acceptor (ID 35976): x?Pro(1-2)x?Ser(1-2)x?Thr(1-2)x?Gln(1-2)x?Pro(1-2)x?Trp?(1-2)x?Glu(1-2)x?His Status: evidence in vitro
Confirmation methods: in vitro (purified protein) ID: 69 Notes: Peptide 8-15 is mannosylated in vitro at the residues 9 and 10. Ser9 has low acceptor activitiy | Organism (ID 16482): Saccharomyces cerevisiae BYS 232-31-4 Full structure (ID 35977): CSDB ID(s): 40828 Molecule role (analog of): O-glycan | ||
| Synthesized dimer: DManp(1-?)Thr Donor (ID 35925): ?DManp(1-P-1)Subst // Subst = dolichol Acceptor (ID 35976): x?Pro(1-2)x?Ser(1-2)x?Thr(1-2)x?Gln(1-2)x?Pro(1-2)x?Trp?(1-2)x?Glu(1-2)x?His Status: evidence in vitro
Confirmation methods: in vitro (purified protein) ID: 70 Notes: Peptide 8-15 is mannosylated in vitro at the residues 9 and 10. Ser9 has low acceptor activitiy | Organism (ID 16482): Saccharomyces cerevisiae BYS 232-31-4 Full structure (ID 35978): CSDB ID(s): 43857 Molecule role (analog of): O-glycan | ||
| Synthesized dimer: DManp(1-?)Thr Donor (ID 35925): ?DManp(1-P-1)Subst // Subst = dolichol Acceptor (ID 35976): x?Pro(1-2)x?Ser(1-2)x?Thr(1-2)x?Gln(1-2)x?Pro(1-2)x?Trp?(1-2)x?Glu(1-2)x?His Status: evidence in vitro
Confirmation methods: in vitro (purified protein) ID: 71 Notes: Peptide 8-15 is mannosylated in vitro at the residues 9 and 10. Ser9 has low acceptor activitiy | Organism (ID 16482): Saccharomyces cerevisiae BYS 232-31-4 Full structure (ID 35979): CSDB ID(s): 43857 Molecule role (analog of): O-glycan | ||
| Synthesized dimer: DManp(1-?)Thr Donor (ID 35925): ?DManp(1-P-1)Subst // Subst = dolichol Acceptor (ID 35980): x?Arg(1-2)x?Ser(1-2)x?Pro(1-2)x?Ser(1-2)x?Pro(1-2)x?Ala?(1-2)x?Thr(1-2)x?Gln Status: evidence in vitro
Confirmation methods: in vitro (purified protein) ID: 72 Notes: In peptide 4-11 (modifoed with Ala10) only Thr10 was used as acceptor site | Organism (ID 16482): Saccharomyces cerevisiae BYS 232-31-4 Full structure (ID 35981): CSDB ID(s): 43857 Molecule role (analog of): O-glycan | ||
| Synthesized dimer: DMan(1-3)Ser Donor (ID 35925): ?DManp(1-P-1)Subst // Subst = dolichol Acceptor (ID 35933): Ac(1-2)/x?Ser?(1-2)/n=4/x?Ser? Status: evidence in vitro
Confirmation methods: in vitro (membrane preparation), mutation ID: 73 Notes: Pmt3 forms a heterodimeric complex with PMT5 and more rarely with PMT1 to transfer mannose from Dol-P-mannose to Ser or Thr residues on proteins. PMT1 and PMT2 can compensate for a deleted PMT3 gene. | Organism (ID 9927,16485): Saccharomyces cerevisiae SEY6210, SEY6211 Full structure (ID 35934): CSDB ID(s): 40828 Molecule role (analog of): O-glycan | Gentzsch et al. 1997 DOI: 10.1093/glycob/7.4.481 | |
| Enzyme name: pmt2p UniProt ID: P31382* CAZy family: GT39 Gene name: PMT2 Gene GenBank ID: 851210* | Synthesized dimer: DManp(1-3)Ser Donor (ID 35925): ?DManp(1-P-1)Subst // Subst = dolichol Acceptor (ID 35933): Ac(1-2)/x?Ser?(1-2)/n=4/x?Ser? Status: evidence in vitro
Confirmation methods: in vitro (microsomal membrane preparation); in vitro (purified protein) ID: 74 Notes: The exact position and degree of mannosylation is unknown. Overexpression of both pmt1p and pmt2p resulted in increased mannosyltransferase activity in vitro. Pmt1p and Pmt2p together partcipate in addition of D-mannose to short peptides in vitro | Organism (ID 9927,16481): Saccharomyces cerevisiae SEY6210, SEY2101 Full structure (ID 35971): CSDB ID(s): 40828 Molecule role (analog of): O-glycan | Gentzsch et al. 1995 DOI: 10.1016/0014-5793(95)01324-5 Gentzsch et al. 1997 DOI: 10.1093/glycob/7.4.481 Immervoll et al. 1995 DOI: 10.1002/yea.320111403 Goder et al. 2011 DOI: 10.1242/jcs.072181 |
| Synthesized dimer: DManp(1-3)Ser Donor (ID 35925): ?DManp(1-P-1)Subst // Subst = dolichol Acceptor (ID 35982): PEP(1-2)< Status: indirect evidence in vivo
Confirmation methods: mutation (in recombinant protein); overexpression ID: 75 Notes: Overexpression of both pmt1p and pmt2p resulted in increased mannosyltransferase activity in vitro. Kre9p, Cts1p, Bar1p, Pir2p/Hsp150, a-agglutinin (Aga2p), Kex2p and Ggp1p were used as substrates. Five of the proteins tested (chitinase, aagglutinin, Kre9p, Barlp, Pir2p/hspl50) are mainly underglycosylated in pmtl and pmt2 mutants | Organism (ID 9927): Saccharomyces cerevisiae SEY6210 Full structure (ID 35929): CSDB ID(s): 40792, 40793, 40828, 43857 Molecule role: O-glycan | Gentzsch et al. 1995 DOI: 10.1016/0014-5793(95)01324-5 Gentzsch et al. 1997 DOI: 10.1093/glycob/7.4.481 | |
| Synthesized dimer: DManp(1-3)Thr Donor (ID 35925): ?DManp(1-P-1)Subst // Subst = dolichol Acceptor (ID 35982): PEP(1-2)< Status: indirect evidence in vivo
Confirmation methods: mutation (in recombinant protein); overexpression ID: 76 Notes: Overexpression of both pmt1p and pmt2p resulted in increased mannosyltransferase activity in vitro. Kre9p, Cts1p, Bar1p, Pir2p/Hsp150, a-agglutinin (Aga2p), Kex2p and Ggp1p were used as substrates. Five of the proteins tested (chitinase, aagglutinin, Kre9p, Barlp, Pir2p/hspl50) are mainly underglycosylated in pmtl and pmt2 mutants | Organism (ID 9927): Saccharomyces cerevisiae SEY6210 Full structure (ID 35932): CSDB ID(s): 40792, 40793, 40828, 43857 Molecule role: O-glycan | ||
| Synthesized dimer: DManp(1-3)Thr Donor (ID 35925): ?DManp(1-P-1)Subst // Subst = dolichol Acceptor (ID 35983): Ac(1-2)x?Tyr(1-2)x?Asn(1-2)x?Pro(1-2)x?Thr(1-2)x?Ser(1-2)x?Val(1-1)NH2 Status: evidence in vitro
Confirmation methods: in vitro (microsomal membrane preparation) ID: 77 Notes: Overexpression of both pmt1p and pmt2p resulted in increased mannosyltransferase activity in vitro. | Organism (ID 9927): Saccharomyces cerevisiae SEY6210 Full structure (ID 35984): CSDB ID(s): 43857 Molecule role (analog of): O-glycan | Gentzsch et al. 1995 DOI: 10.1016/0014-5793(95)01324-5 Lussier et al. 1995b DOI: 10.1074/jbc.270.6.2770 Harty et al. 2001 DOI: 10.1091/mbc.12.4.1093 | |
| Synthesized dimer: DManp(1-3)Ser Donor (ID 35925): ?DManp(1-P-1)Subst // Subst = dolichol Acceptor (ID 35983): Ac(1-2)x?Tyr(1-2)x?Asn(1-2)x?Pro(1-2)x?Thr(1-2)x?Ser(1-2)x?Val(1-1)NH2 Status: evidence in vitro
Confirmation methods: in vitro (microsomal membrane preparation) ID: 78 Notes: Overexpression of both pmt1p and pmt2p resulted in increased mannosyltransferase activity in vitro. | Organism (ID 9927): Saccharomyces cerevisiae SEY6210 Full structure (ID 35985): CSDB ID(s): 40828 Molecule role (analog of): O-glycan | ||
| Synthesized dimer: DManp(1-3)Thr Donor (ID 35925): ?DManp(1-P-1)Subst // Subst = dolichol Acceptor (ID 35935): Ac(1-2)x?Tyr(1-2)x?Ala?(1-2)x?Thr(1-2)x?Ala?(1-2)x?Val(1-1)NH2 Status: evidence in vitro
Confirmation methods: in vitro (crude extract); mutation (in recombinant protein) ID: 79 Notes: Pmt1p and Pmt2p together partcipate in addition of D-mannose to short peptides in vitro | Organism (ID 9927,10607,16485,16486,16487,16488,16489,16490,16491,16492,16493): Saccharomyces cerevisiae SEY6210, BY4741, SEY6211, EZY48, EZY50, EZY51, EZY52, EZY53, EZY54, EZY55, EZY58 Full structure (ID 35936): CSDB ID(s): 43857 Molecule role (analog of): O-glycan | Zatorska et al. 2017 DOI: 10.3390/ijms18061226 Gentzsch et al. 1995 DOI: 10.1016/0014-5793(95)01324-5 Lussier et al. 1995b DOI: 10.1074/jbc.270.6.2770 Gentzsch et al. 1996 PMID: 8918452 | |
| Synthesized dimer: DManp(1-3)Thr Donor (ID 35925): ?DManp(1-P-1)Subst // Subst = dolichol Acceptor (ID 35937): PEP(1-2)< Status: indirect evidence in vivo
Confirmation methods: mutation ID: 80 Notes: Pmt1 and Pmt2 proteins are highly similar on the sequence, as well as the structural level and act as a complex | Organism (ID 9927,16460,16461): Saccharomyces cerevisiae SEY6210, JHY1, MLY67 Full structure (ID 35938): CSDB ID(s): 40792, 40793, 40828, 43857 Molecule role (precursor of): O-glycan | Zatorska et al. 2017 DOI: 10.3390/ijms18061226 Gentzsch et al. 1997 DOI: 10.1093/glycob/7.4.481 | |
| Synthesized dimer: DManp(1-3)Ser Donor (ID 35925): ?DManp(1-P-1)Subst // Subst = dolichol Acceptor (ID 35937): PEP(1-2)< Status: indirect evidence in vivo
Confirmation methods: mutation ID: 81 Notes: Pmt1 and Pmt2 proteins are highly similar on the sequence, as well as the structural level and act as a complex | Organism (ID 9927,16460,16461): Saccharomyces cerevisiae SEY6210, JHY1, MLY67 Full structure (ID 35939): CSDB ID(s): 40792, 40793, 40828, 43857 Molecule role (precursor of): O-glycan | ||
| Synthesized dimer: DMan(1-3)Ser Donor (ID 35925): ?DManp(1-P-1)Subst // Subst = dolichol Acceptor (ID 35933): Ac(1-2)/x?Ser?(1-2)/n=4/x?Ser? Status: evidence in vitro
Confirmation methods: in vitro (membrane preparation), mutation ID: 82 Notes: Pmt3 forms a heterodimeric complex with PMT5 and more rarely with PMT1 to transfer mannose from Dol-P-mannose to Ser or Thr residues on proteins. PMT1 and PMT2 can compensate for a deleted PMT3 gene. | Organism (ID 9927,16485): Saccharomyces cerevisiae SEY6210, SEY6211 Full structure (ID 35934): CSDB ID(s): 40828 Molecule role (analog of): O-glycan | Gentzsch et al. 1997 DOI: 10.1093/glycob/7.4.481 | |
| Enzyme name: pmt3p UniProt ID: P47190* CAZy family: GT39 Gene name: PMT3 Gene GenBank ID: 854499* | Synthesized dimer: DManp(1-3)Thr Donor (ID 35925): ?DManp(1-P-1)Subst // Subst = dolichol Acceptor (ID 35982): PEP(1-2)< Status: indirect evidence in vivo
Confirmation methods: mutation ID: 83 Notes: Kre9p, Cts1p, Bar1p, Pir2p/Hsp150, a-agglutinin (Aga2p), Kex2p and Ggp1p were used as substrates. PMT3 mutation does affect O-mannosylation of chitinase only in the genetic background of a pmt1pmt2 double mutation, indicating that PMT1 and PMT2 can compensate for a deleted PMT3 gene | Organism (ID 9927): Saccharomyces cerevisiae SEY6210 Full structure (ID 35932): CSDB ID(s): 40792, 40793, 40828, 43857 Molecule role (precursor of): O-glycan | |
| Synthesized dimer: DManp(1-3)Ser Donor (ID 35925): ?DManp(1-P-1)Subst // Subst = dolichol Acceptor (ID 35982): PEP(1-2)< Status: indirect evidence in vivo
Confirmation methods: mutation ID: 84 Notes: Kre9p, Cts1p, Bar1p, Pir2p/Hsp150, a-agglutinin (Aga2p), Kex2p, and Ggp1p were used as substrates. PMT3 mutation does affect O-mannosylation of chitinase only in the genetic background of a pmt1pmt2 double mutation, indicating that PMT1 and PMT2 can compensate for a deleted PMT3 gene | Organism (ID 9927): Saccharomyces cerevisiae SEY6210 Full structure (ID 35929): CSDB ID(s): 40792, 40793, 40828, 43857 Molecule role (precursor of): O-glycan | ||
| Enzyme name: pmt4p UniProt ID: P46971* CAZy family: GT39 Gene name: PMT4 Gene GenBank ID: 853608* | Synthesized dimer: DManp(1-3)Thr Donor (ID 35925): ?DManp(1-P-1)Subst // Subst = dolichol Acceptor (ID 35986): Subst(1-?)x?Tyr(1-2)x?Ala?(1-2)x?Thr(1-2)x?Ala?(1-2)x?Val(1-1)Cm // Subst = biotin = SMILES C1C2C(C(S1)CCCC{1}C(=O)O)NC(=O)N2 Status: evidence in vitro
Confirmation methods: in vitro (crude extract) ID: 85 Notes: PMT1 and PMT2 mannosyltransferases form distinct heteromeric complexes, whereas Pmt4 acts as a homomeric complex. | Organism (ID 9927): Saccharomyces cerevisiae SEY6210 Full structure (ID 35987): CSDB ID(s): 43857 Molecule role (analog of): O-glycan | Lommel et al. 2011 DOI: 10.1074/jbc.M111.281196 Girrbach et al. 2003 DOI: 10.1074/jbc.M212582200 Bausewein et al. 2016 DOI: 10.1074/jbc.M116.739128 |
| Synthesized dimer: DManp(1-3)Thr Donor (ID 35925): ?DManp(1-P-1)Subst // Subst = dolichol Acceptor (ID 35988): x?His(1-2)x?Ile(1-2)x?Arg(1-2)x?Pro(1-2)x?Thr(1-2)x?Met(1-2)x?Thr(1-2)x?Ile(1-2)x?Pro(1-2)xXGly(1-2)x?Tyr(1-2)x?Val(1-2)x?Glu(1-2)x?Pro(1-2)x?Thr(1-2)x?Ala?(1-2)x?Val(1-2)x?Ala?(1-2)x?Thr(1-2)x?Pro(1-2)x?Pro(1-2)[Subst(?-?)]x?Lys(1-1)NH2 // Subst = biotin = SMILES C1C2{8}C(C(S1)CCCCC(=O)O)N{10}C(=O)N2 Status: evidence in vitro
Confirmation methods: in vitro (crude extract) ID: 86 Notes: PMT1 and PMT2 mannosyltransferases form distinct heteromeric complexes, whereas Pmt4 acts as a homomeric complex . Acceptor peptides 401-420-bio and 418-440-bio served as mannosyl acceptors for Pmt4 and Pmt1-Pmt2, although to differing degrees | Organism (ID 9927): Saccharomyces cerevisiae SEY6210 Full structure (ID 35989): CSDB ID(s): 43857 Molecule role (analog of): O-glycan | Gentzsch et al. 1997 DOI: 10.1093/glycob/7.4.481 Immervoll et al. 1995 DOI: 10.1002/yea.320111403 Bausewein et al. 2016 DOI: 10.1074/jbc.M116.739128 Lommel et al. 2004 DOI: 10.1128/MCB.24.1.46–57.2004 Proszynski et al. 2004 DOI: 10.1091/mbc.E03–07–0511 Sanders et al. 1999 DOI: 10.1083/jcb.145.6.1177 | |
| Synthesized dimer: DManp(1-3)Thr Donor (ID 35925): ?DManp(1-P-1)Subst // Subst = dolichol Acceptor (ID 35990): x?His(1-2)x?Thr(1-2)x?Pro(1-2)x?Pro(1-2)x?Thr(1-2)x?Thr(1-2)x?Thr(1-2)x?Thr(1-2)x?Lys(1-2)x?Lys(1-2)x?Pro(1-2)x?Arg(1-2)x?Val(1-2)x?Ser(1-2)x?Thr(1-2)x?Pro(1-2)x?Lys(1-2)x?Pro(1-2)x?Ala?(1-2)x?Thr(1-2)x?Pro(1-2)x?Ser(1-2)x?Thr(1-2)x?Asp?(1-2)[Subst(?-?)]x?Lys(1-1)NH2 // Subst = biotin = SMILES C1C2{8}C(C(S1)CCCCC(=O)O)N{10}C(=O)N2 Status: evidence in vitro
Confirmation methods: in vitro (crude extract) ID: 87 Notes: PMT1 and PMT2 mannosyltransferases form distinct heteromeric complexes, whereas Pmt4 acts as a homomeric complex . Acceptor peptides 401-420-bio and 418-440-bio served as mannosyl acceptors for Pmt4 and Pmt1-Pmt2, although to differing degrees | Organism (ID 9927): Saccharomyces cerevisiae SEY6210 Full structure (ID 35991): CSDB ID(s): 43857 Molecule role (analog of): O-glycan | ||
| Synthesized dimer: DManp(1-3)Ser Donor (ID 35925): ?DManp(1-P-1)Subst // Subst = dolichol Acceptor (ID 35992): x?His(1-2)x?Thr(1-2)x?Pro(1-2)x?Pro(1-2)x?Thr(1-2)x?Thr(1-2)x?Thr(1-2)x?Thr(1-2)x?Lys(1-2)x?Lys(1-2)x?Pro(1-2)x?Arg(1-2)x?Val(1-2)x?Ser(1-2)x?Thr(1-2)x?Pro(1-2)x?Lys(1-2)x?Pro(1-2)x?Ala?(1-2)x?Thr(1-2)x?Pro(1-2)x?Ser(1-2)x?Thr(1-2)x?Asp?(1-2)x?Lys(1-?)Subst // Subst = biotin = SMILES C1C2{8}C(C(S1)CCCCC(=O)O)N{10}C(=O)N2 Status: evidence in vitro
Confirmation methods: in vitro (crude extract) ID: 88 Notes: PMT1 and PMT2 mannosyltransferases form distinct heteromeric complexes, whereas Pmt4 acts as a homomeric complex . Acceptor peptides 401-420-bio and 418-440-bio served as mannosyl acceptors for Pmt4 and Pmt1-Pmt2, although to differing degrees | Organism (ID 9927): Saccharomyces cerevisiae SEY6210 Full structure (ID 35993): CSDB ID(s): 40828 Molecule role (analog of): O-glycan | ||
| Synthesized dimer: DManp(1-3)Thr Donor (ID 35925): ?DManp(1-P-1)Subst // Subst = dolichol Acceptor (ID 35982): PEP(1-2)< Status: direct evidence in vivo
Confirmation methods: mutation; double mutation; in silico, in vitro (membrane preparation) ID: 89 Notes: In yeast Pmt4p mediates O-mannosylation of Ser/Thr-rich membrane-attached proteins. Kre9p, Cts1p, Bar1p, Pir2p/Hsp150, a-agglutinin (Aga2p), Kex2p and Ggp1p were used as substrates. With alpha-dystroglycan, in vitro activity was demonstrated. | Organism (ID 9927,16494,16495): Saccharomyces cerevisiae SEY6210, SEY5188, SFNY28-6C Full structure (ID 35932): CSDB ID(s): 40792, 40793, 40828, 43857 Molecule role (precursor of): O-glycan | Gentzsch et al. 1997 DOI: 10.1093/glycob/7.4.481 Immervoll et al. 1995 DOI: 10.1002/yea.320111403 Bausewein et al. 2016 DOI: 10.1074/jbc.M116.739128 Lommel et al. 2004 DOI: 10.1128/MCB.24.1.46–57.2004 Proszynski et al. 2004 DOI: 10.1091/mbc.E03–07–0511 Sanders et al. 1999 DOI: 10.1083/jcb.145.6.1177 Hutzler et al. 2007 DOI: 10.1073pnas.0700374104 | |
| Synthesized dimer: DManp(1-3)Ser Donor (ID 35925): ?DManp(1-P-1)Subst // Subst = dolichol Acceptor (ID 35982): PEP(1-2)< Status: direct evidence in vivo
Confirmation methods: mutation; double mutation; in silico, in vitro (membrane preparation) ID: 90 Notes: In yeast Pmt4p mediates O-mannosylation of Ser/Thr-rich membrane-attached proteins. Kre9p, Cts1p, Bar1p, Pir2p/Hsp150, a-agglutinin (Aga2p), Kex2p and Ggp1p were used as substrates. With alpha-dystroglycan, in vitro activity was demonstrated. | Organism (ID 9927,16494,16495): Saccharomyces cerevisiae SEY6210, SEY5188, SFNY28-6C Full structure (ID 35929): CSDB ID(s): 40792, 40793, 40828, 43857 Molecule role (precursor of): O-glycan | ||
| Enzyme name: pmt5p UniProt ID: P52867* CAZy family: GT39 Gene name: PMT5 Gene GenBank ID: 851464* | Synthesized dimer: DManp(1-3)Thr Donor (ID 35925): ?DManp(1-P-1)Subst // Subst = dolichol Acceptor (ID 35968): Ac(1-2)x?Tyr(1-2)x?Ala?(1-2)x?Thr(1-2)x?Ala?(1-2)x?Val Status: evidence in vitro
Confirmation methods: in vitro (membrane preparation); double mutation ID: 91 Notes: Members of the PMT1 subfamily (Pmt1p and Pmt5p) interact in pairs with members of the PMT2 subfamily (Pmt2p and Pmt3p) and Pmt1p-Pmt2p and Pmt5p-Pmt3p complexes represent the predominant forms. In pmt1pmt3 and pmt2pmt5 mutants, in which Pmt5p-Pmt2p and Pmt1p-Pmt3p complexes are formed, in vitro O-mannosyltransferase activity is increased by 68.2% and 42.6%, respectively, when compared with pmt1pmt2 mutants. | Organism (ID 9927,16496): Saccharomyces cerevisiae SEY6210, CFY3 Full structure (ID 35969): CSDB ID(s): 43857 Molecule role (analog of): O-glycan | Gentzsch et al. 1997 DOI: 10.1093/glycob/7.4.481 Lommel et al. 2011 DOI: 10.1074/jbc.M111.281196 Immervoll et al. 1995 DOI: 10.1002/yea.320111403 Girrbach et al. 2003 DOI: 10.1074/jbc.M212582200 Lommel et al. 2004 DOI: 10.1128/MCB.24.1.46–57.2004 Proszynski et al. 2004 DOI: 10.1091/mbc.E03–07–0511 Sanders et al. 1999 DOI: 10.1083/jcb.145.6.1177 |
| Enzyme name: ktr1p UniProt ID: P27810* CAZy family: GT15 Gene name: KTR1 Gene GenBank ID: 854266* | Synthesized dimer: aDManp(1-2)DManp Donor (ID 35793): ?DManp(1-P-P-5)xXnucG Acceptor (ID 35994): PEP(1-2)[?DManp(1-3)]x?Ser(1-2)PEP // PEP = protein fragment Status: evidence in vitro
Confirmation methods: mutation ID: 94 Notes: Ktr1p, Ktr3p and Kre2p together participate in addition of the 2nd and 3rd alpha-1,2-linked mannoses to O-linked carbohydrate chains. | Organism (ID 9927): Saccharomyces cerevisiae SEY6210 Full structure (ID 35995): CSDB ID(s): 40797 Molecule role: O-glycan | Lussier et al. 1997a DOI: 10.1002/(SICI)1097-0061(19970315)13:3<267::AID-YEA72>3.0.CO%3B2-K |
| Synthesized dimer: aDManp(1-2)DManp Donor (ID 35793): ?DManp(1-P-P-5)xXnucG Acceptor (ID 35996): PEP(1-2)[aDManp(1-2)?DManp(1-3)]x?Ser(1-2)PEP // PEP = protein fragment Status: evidence in vitro
Confirmation methods: mutation ID: 95 Notes: Ktr1p, Ktr3p and Kre2p together participate in addition of the 2nd and 3rd alpha-1,2-linked mannoses to O-linked carbohydrate chains. | Organism (ID 9927): Saccharomyces cerevisiae SEY6210 Full structure (ID 35995): CSDB ID(s): 40797 Molecule role: O-glycan | ||
| Synthesized dimer: aDManp(1-2)aDManp Donor (ID 35793): ?DManp(1-P-P-5)xXnucG Acceptor (ID 35997): PEP(1-2)[?DManp(1-3)]x?Thr(1-2)PEP // PEP = protein fragment Status: evidence in vitro
Confirmation methods: mutation ID: 96 Notes: Ktr1p, Ktr3p and Kre2p together participate in addition of the 2nd and 3rd alpha-1,2-linked mannoses to O-linked carbohydrate chains. | Organism (ID 9927): Saccharomyces cerevisiae SEY6210 Full structure (ID 35998): CSDB ID(s): 40796 Molecule role: O-glycan | ||
| Synthesized dimer: aDManp(1-2)aDManp Donor (ID 35793): ?DManp(1-P-P-5)xXnucG Acceptor (ID 35999): PEP(1-2)[aDManp(1-2)?DManp(1-3)]x?Thr(1-2)PEP // PEP = protein fragment Status: evidence in vitro
Confirmation methods: mutation ID: 97 Notes: Ktr1p, Ktr3p and Kre2p together participate in addition of the 2nd and 3rd alpha-1,2-linked mannoses to O-linked carbohydrate chains. | Organism (ID 9927): Saccharomyces cerevisiae SEY6210 Full structure (ID 35998): CSDB ID(s): 40796 Molecule role: O-glycan | ||
| Synthesized dimer: aDManp(1-2)DManp Donor (ID 35793): ?DManp(1-P-P-5)xXnucG Acceptor (ID 36000): aDManp(1-1)Me Status: evidence in vitro
Confirmation methods: mutation; in vitro (membrane preparation) ID: 98 Notes: Ktr1p, Ktr2p, and Yur1p have mannosyltransferase activity in vitro | Organism (ID 9927): Saccharomyces cerevisiae SEY6210 Full structure (ID 36001): CSDB ID(s): 26950, 43442, 141619 Molecule role (analog of): O-glycan | Lussier et al. 1996 DOI: 10.1074/jbc.271.18.11001 | |
| Synthesized dimer: aDManp(1-2)DManp Donor (ID 35793): ?DManp(1-P-P-5)xXnucG Acceptor (ID 36002): ?DManp Status: evidence in vitro
Confirmation methods: expression in P. pastoris, in vitro (recombinant protein); mutation ID: 99 Notes: Recombinant protein Ktr1p was shown to exhibit α1,2-mannosyltransferase activity in vitro | Organism (ID 9927): Saccharomyces cerevisiae SEY6210 Expressed in: P. pastoris Full structure (ID 4414): CSDB ID(s): 825, 1331, 2567, 3073, 3519, 40436, 40447, 40605, 40642, 41202, 41278, 42182, 42206, 42962, 43250, 43545, 43560, 43633, 43637, 44106, 44129, 44962, 45762, 45860, 46357, 47120, 49831, 49858, 51634, 100209, 104350, 104617, 104755, 105503, 116241, 125683, 130518, 130519, 136630, 141618, 216783 Molecule role (analog of): O-glycan | Romero et al. 1997 DOI: 10.1042/bj3210289 | |
| Synthesized dimer: aDManp(1-2)DManp Donor (ID 35793): ?DManp(1-P-P-5)xXnucG Acceptor (ID 36000): aDManp(1-1)Me Status: evidence in vitro
Confirmation methods: expression in P. pastoris, in vitro (recombinant protein) ID: 100 Notes: Recombinant protein Ktr1p was shown to exhibit α1,2-mannosyltransferase activity in vitro | Organism (ID 9605): Saccharomyces cerevisiae Expressed in: P. pastoris Full structure (ID 36001): CSDB ID(s): 26950, 43442, 141619 Molecule role (analog of): O-glycan | Lussier et al. 1996 DOI: 10.1074/jbc.271.18.11001 Romero et al. 1997 DOI: 10.1042/bj3210289 | |
| Synthesized dimer: aDManp(1-2)DManp Donor (ID 35793): ?DManp(1-P-P-5)xXnucG Acceptor (ID 36003): aDManp(1-2)?DManp Status: evidence in vitro
Confirmation methods: expression in P. pastoris, in vitro (recombinant protein) ID: 101 Notes: Recombinant protein Ktr1p was shown to exhibit α1,2-mannosyltransferase activity in vitro | Organism (ID 9605): Saccharomyces cerevisiae Expressed in: P. pastoris Full structure (ID 36004): CSDB ID(s): 42126, 43308, 45763, 45853, 104122, 105505, 110093, 111289, 116783, 125684, 245159 Molecule role (analog of): O-glycan | Romero et al. 1997 DOI: 10.1042/bj3210289 | |
| Synthesized dimer: aDManp(1-2)DManp Donor (ID 35793): ?DManp(1-P-P-5)xXnucG Acceptor (ID 36005): aDManp(1-2)?DManp(1-1)Me Status: evidence in vitro
Confirmation methods: expression in P. pastoris, in vitro (recombinant protein) ID: 102 Notes: Recombinant protein Ktr1p was shown to exhibit α1,2-mannosyltransferase activity in vitro | Organism (ID 9605): Saccharomyces cerevisiae Expressed in: P. pastoris Full structure (ID 36006): CSDB ID(s): 43442 Molecule role (analog of): O-glycan | ||
| Synthesized dimer: aDManp(1-2)aDManp Donor (ID 35793): ?DManp(1-P-P-5)xXnucG Acceptor (ID 36007): /aDManp(1-2)/n=14-29/aDManp(1-?)[Ac(1-2)]?DGlcpN Status: evidence in vitro
Confirmation methods: expression in P. pastoris, in vitro (recombinant protein) ID: 103 Notes: Recombinant protein Ktr1p was shown to exhibit α1,2-mannosyltransferase activity in vitro | Organism (ID 9605): Saccharomyces cerevisiae Expressed in: P. pastoris Full structure (ID 36008): Molecule role (analog of): O-glycan | ||
| Enzyme name: ktr3p UniProt ID: P38130* CAZy family: GT15 Gene name: KTR3 Gene GenBank ID: 852504* | Synthesized dimer: aDManp(1-2)DManp Donor (ID 35793): ?DManp(1-P-P-5)xXnucG Acceptor (ID 35994): PEP(1-2)[?DManp(1-3)]x?Ser(1-2)PEP // PEP = protein fragment Status: indirect evidence in vivo
Confirmation methods: mutation ID: 106 Notes: Ktr1p, Ktr3p and Kre2p together participate in addition of the 2nd and 3rd alpha-1,2-linked mannoses to O-linked carbohydrate chains. | Organism (ID 9927): Saccharomyces cerevisiae SEY6210 Full structure (ID 35995): CSDB ID(s): 40797 Molecule role: O-glycan | Lussier et al. 1997 DOI: 10.1074/jbc.272.24.15527 Noda et al. 2010 DOI: 10.1074/jbc.M109.086272 |
| Synthesized dimer: aDManp(1-2)aDManp Donor (ID 35793): ?DManp(1-P-P-5)xXnucG Acceptor (ID 35996): PEP(1-2)[aDManp(1-2)?DManp(1-3)]x?Ser(1-2)PEP // PEP = protein fragment Status: indirect evidence in vivo
Confirmation methods: mutation ID: 107 Notes: Ktr1p, Ktr3p and Kre2p together participate in addition of the 2nd and 3rd alpha-1,2-linked mannoses to O-linked carbohydrate chains. | Organism (ID 9927): Saccharomyces cerevisiae SEY6210 Full structure (ID 35995): CSDB ID(s): 40797 Molecule role: O-glycan | ||
| Synthesized dimer: aDManp(1-2)DManp Donor (ID 35793): ?DManp(1-P-P-5)xXnucG Acceptor (ID 35997): PEP(1-2)[?DManp(1-3)]x?Thr(1-2)PEP // PEP = protein fragment Status: indirect evidence in vivo
Confirmation methods: mutation ID: 108 Notes: Ktr1p, Ktr3p and Kre2p together participate in addition of the 2nd and 3rd alpha-1,2-linked mannoses to O-linked carbohydrate chains. | Organism (ID 9927): Saccharomyces cerevisiae SEY6210 Full structure (ID 35998): CSDB ID(s): 40796, 108047 Molecule role: O-glycan | ||
| Synthesized dimer: aDManp(1-2)aDManp Donor (ID 35793): ?DManp(1-P-P-5)xXnucG Acceptor (ID 35999): PEP(1-2)[aDManp(1-2)?DManp(1-3)]x?Thr(1-2)PEP // PEP = protein fragment Status: indirect evidence in vivo
Confirmation methods: mutation ID: 109 Notes: Ktr1p, Ktr3p and Kre2p together participate in addition of the 2nd and 3rd alpha-1,2-linked mannoses to O-linked carbohydrate chains. | Organism (ID 9927): Saccharomyces cerevisiae SEY6210 Full structure (ID 35998): CSDB ID(s): 40796, 108047 Molecule role: O-glycan | ||
| Enzyme name: ktr4p UniProt ID: P38131 CAZy family: GT15 Gene name: KTR4 Gene GenBank ID: 852498 | Synthesized dimer: DManp(1-?)DManp Donor (ID 35793): ?DManp(1-P-P-5)xXnucG Acceptor (ID 17388): aDManp(1-2)aDManp Status: evidence in vitro
Confirmation methods: in vitro (purified protein); expression in E. coli ID: 110 Notes: Activity of Ktr4p determined in vitro using tested acceptor carbohydrates | Organism (ID 16497): Saccharomyces cerevisiae S288c Expressed in: E. coli Full structure (ID 36009): CSDB ID(s): 42126, 43308, 45763, 104122, 105505, 110093, 111289, 116783, 125684, 245159 Molecule role (precursor of): N-glycan,O-glycan | Possner et al. 2015 DOI: 10.1371/journal.pone.0136239 Mallet et al. 1994 DOI: 10.1002/yea.320100612 |
| Synthesized dimer: DManp(1-?)DManp Donor (ID 35793): ?DManp(1-P-P-5)xXnucG Acceptor (ID 36000): aDManp(1-1)Me Status: evidence in vitro
Confirmation methods: in vitro (purified protein); expression in E. coli ID: 111 Notes: Activity of Ktr4p determined in vitro using tested acceptor carbohydrates | Organism (ID 16497): Saccharomyces cerevisiae S288c Expressed in: E. coli Full structure (ID 36010): CSDB ID(s): 26950, 43442, 43443, 141619 Molecule role (precursor of): N-glycan,O-glycan | ||
| Enzyme name: ktr6p UniProt ID: P54070* CAZy family: GT15 Gene name: KTR6/MNN6 Gene GenBank ID: 856054* | Synthesized dimer: aDManp(1-2)DManp Donor (ID 35793): ?DManp(1-P-P-5)xXnucG Acceptor (ID 36011): ?DManp(1-?)Subst // Subst = lipid-linked oligosaccharide Status: indirect evidence in vivo
Confirmation methods: mutation; in silico ID: 113 Notes: Ktr5p, Ktr6p and Ktr7p do not take part in the elaboration of components of the killer K1 toxin receptor or, in their absence, other member(s) of the family are able to functionally substitute for them | Organism (ID 9927): Saccharomyces cerevisiae SEY6210 Full structure (ID 36012): CSDB ID(s): 825, 1331, 2567, 3073, 3519, 40436, 40447, 40605, 40642, 41202, 41278, 42182, 42206, 42962, 43250, 43545, 43560, 43633, 43637, 44106, 44129, 44962, 45762, 45860, 46357, 47120, 100209, 104350, 104617, 104755, 105503, 116241, 125683, 130518, 130519, 136630, 141618, 216783 Molecule role (precursor of): O-glycan | Lussier et al. 1997a DOI: 10.1002/(SICI)1097-0061(19970315)13:3<267::AID-YEA72>3.0.CO%3B2-K Wang et al. 1997 DOI: 10.1074/jbc.272.29.18117 Odani et al. 1997 DOI: 10.1016/S0014-5793(97)01513-5 |
| Synthesized dimer: DManp(1-?)P Donor (ID 35793): ?DManp(1-P-P-5)xXnucG Acceptor (ID 36013): aDManp(1-2)aDManp(1-2)aDManp(1-3)[aDManp(1-3)[aDManp(1-2)aDManp(1-6)]aDManp(1-6)]bDManp(1-4)[Ac(1-2)]bDGlcpN(1-4)[Ac(1-2)]?DGlcpN1N(1-2)Subst // Subst = aminopyridine = SMILES n1cccc{2}c1N Status: semi-direct evidence in vivo
Confirmation methods: mutation; in vitro (inhibition); in vitro (membrane preparation); complementation ID: 114 Notes: MNN6 is a structural gene encoding a mannosylphosphate transferase, which recognizes any oligosaccharides with at least one a-1,2-linked mannobiose unit | Organism (ID 16498,16499,16500,16501,16502,16503): Saccharomyces cerevisiae TO3-6D, LB1425–1B, XHW13, XW43, XW44, YS133–1D Full structure (ID 36014): CSDB ID(s): 44142 Molecule role (analog of): N-glycan | Wang et al. 1997 DOI: 10.1074/jbc.272.29.18117 Odani et al. 1997 DOI: 10.1016/S0014-5793(97)01513-5 | |
| Synthesized dimer: DManp(1-?)P Donor (ID 35793): ?DManp(1-P-P-5)xXnucG Acceptor (ID 36013): aDManp(1-2)aDManp(1-2)aDManp(1-3)[aDManp(1-3)[aDManp(1-2)aDManp(1-6)]aDManp(1-6)]bDManp(1-4)[Ac(1-2)]bDGlcpN(1-4)[Ac(1-2)]?DGlcpN1N(1-2)Subst // Subst = aminopyridine = SMILES n1cccc{2}c1N Status: semi-direct evidence in vivo
Confirmation methods: mutation; in vitro (inhibition); in vitro (membrane preparation); complementation ID: 115 Notes: MNN6 is a structural gene encoding a mannosylphosphate transferase, which recognizes any oligosaccharides with at least one a-1,2-linked mannobiose unit | Organism (ID 16498,16499,16500,16501,16502,16503): Saccharomyces cerevisiae TO3-6D, LB1425–1B, XHW13, XW43, XW44, YS133–1D Full structure (ID 36015): CSDB ID(s): 44142 Molecule role (analog of): N-glycan | ||
| Synthesized dimer: DManp(1-?)P Donor (ID 35793): ?DManp(1-P-P-5)xXnucG Acceptor (ID 36016): aDManp(1-2)aDManp(1-2)aDManp(1-3)[aDManp(1-6)]bDManp(1-4)[Ac(1-2)]bDGlcpN(1-4)[Ac(1-2)]?DGlcpN1N(1-2)Subst // Subst = aminopyridine = SMILES n1cccc{2}c1N Status: semi-direct evidence in vivo
Confirmation methods: mutation; in vitro (inhibition); in vitro (membrane preparation); complementation ID: 116 Notes: MNN6 is a structural gene encoding a mannosylphosphate transferase, which recognizes any oligosaccharides with at least one a-1,2-linked mannobiose unit | Organism (ID 16498,16499,16500,16501,16502,16503): Saccharomyces cerevisiae TO3-6D, LB1425–1B, XHW13, XW43, XW44, YS133–1D Full structure (ID 36017): Molecule role (analog of): N-glycan | ||
| Enzyme name: kre2p/mnt1p UniProt ID: P27809* CAZy family: GT15 Gene name: KRE2/MNT1 Gene GenBank ID: 852094* | Synthesized dimer: aDManp(1-2)aDManp Donor (ID 35793): ?DManp(1-P-P-5)xXnucG Acceptor (ID 35994): PEP(1-2)[?DManp(1-3)]x?Ser(1-2)PEP // PEP = protein fragment Status: indirect evidence in vivo
Confirmation methods: mutation ID: 118 Notes: Ktr1p, Ktr3p and Kre2p together participate in addition of the 2nd and 3rd alpha-1,2-linked mannoses to O-linked carbohydrate chains. | Organism (ID 9927): Saccharomyces cerevisiae SEY6210 Full structure (ID 36018): CSDB ID(s): 40797 Molecule role: O-glycan | Goto et al. 1999 DOI: 10.1046/j.1432-1327.1999.00207.x Lussier et al. 1997 DOI: 10.1074/jbc.272.24.15527 Hausler et al. 1992 PMID: 1495972 |
| Synthesized dimer: aDManp(1-2)aDManp Donor (ID 35793): ?DManp(1-P-P-5)xXnucG Acceptor (ID 35996): PEP(1-2)[aDManp(1-2)?DManp(1-3)]x?Ser(1-2)PEP // PEP = protein fragment Status: indirect evidence in vivo
Confirmation methods: mutation ID: 119 Notes: Ktr1p, Ktr3p and Kre2p together participate in addition of the 2nd and 3rd alpha-1,2-linked mannoses to O-linked carbohydrate chains. | Organism (ID 9927,16504,16505): Saccharomyces cerevisiae SEY6210, YAH115, YAH116 Full structure (ID 36018): CSDB ID(s): 40797 Molecule role: O-glycan | ||
| Synthesized dimer: aDManp(1-2)aDManp Donor (ID 35793): ?DManp(1-P-P-5)xXnucG Acceptor (ID 35997): PEP(1-2)[?DManp(1-3)]x?Thr(1-2)PEP // PEP = protein fragment Status: indirect evidence in vivo
Confirmation methods: mutation ID: 120 Notes: Ktr1p, Ktr3p and Kre2p together participate in addition of the 2nd and 3rd alpha-1,2-linked mannoses to O-linked carbohydrate chains. | Organism (ID 9927): Saccharomyces cerevisiae SEY6210 Full structure (ID 36019): CSDB ID(s): 40796 Molecule role: O-glycan | Goto et al. 1999 DOI: 10.1046/j.1432-1327.1999.00207.x Lussier et al. 1997 DOI: 10.1074/jbc.272.24.15527 Hausler et al. 1992 PMID: 1495972 Lussier et al. 1993 DOI: 10.1002/yea.320091004 | |
| Synthesized dimer: aDManp(1-2)aDManp Donor (ID 35793): ?DManp(1-P-P-5)xXnucG Acceptor (ID 35999): PEP(1-2)[aDManp(1-2)?DManp(1-3)]x?Thr(1-2)PEP // PEP = protein fragment Status: indirect evidence in vivo
Confirmation methods: mutation ID: 121 Notes: Ktr1p, Ktr3p and Kre2p together participate in addition of the 2nd and 3rd alpha-1,2-linked mannoses to O-linked carbohydrate chains. | Organism (ID 9927,16504,16505): Saccharomyces cerevisiae SEY6210, YAH115, YAH116 Full structure (ID 36019): CSDB ID(s): 40796 Molecule role: O-glycan | Lussier et al. 1997 DOI: 10.1074/jbc.272.24.15527 Hausler et al. 1992 PMID: 1495972 Lussier et al. 1993 DOI: 10.1002/yea.320091004 | |
| Synthesized dimer: aDManp(1-2)aDManp Donor (ID 35793): ?DManp(1-P-P-5)xXnucG Acceptor (ID 36000): aDManp(1-1)Me Status: evidence in vitro
Confirmation methods: mutation (in recombinant protein); expression in P. pastoris; in vitro (purified protein); in vitro (membrane preparation); overexpression, expression in E. coli ID: 122 Notes: The Mnt1p mutant strains lack mannotriose to pentaose (Man3-Man5), indicating a defect in the attachment of the third mannose, the second alpha-1,2-linked residue. Recombinant protein Ktr1p was shown to exhibit a1,2- mannosyltransferase activity in vitro. Mannosyltransferase activity of kre2 mannosyltransferase demonstrated in vitro using synthetic substrates (46% relative activity) | Organism (ID 9585,9927,16504,16505,16506,16507,16508): Saccharomyces cerevisiae X2180-1A, SEY6210, YAH115, YAH116, YPH250, DBY2068, S86 Expressed in: P. pastoris, E. coli Full structure (ID 6115): CSDB ID(s): 43442 Molecule role (analog of): O-glycan | Lussier et al. 1996 DOI: 10.1074/jbc.271.18.11001 Romero et al. 1997 DOI: 10.1042/bj3210289 Lussier et al. 1997 DOI: 10.1074/jbc.272.24.15527 Hausler et al. 1992 PMID: 1495972 Herrmann et al. 1994 DOI: 10.1021/jo00100a043 | |
| Synthesized dimer: aDManp(1-2)aDManp Donor (ID 35793): ?DManp(1-P-P-5)xXnucG Acceptor (ID 36020): aDManp(1-2)aDManp(1-1)Me Status: evidence in vitro
Confirmation methods: mutation (in recombinant protein); in vitro (membrane preparation); expression in P. pastoris, in vitro (recombinant protein) ID: 123 Notes: The Mnt1p mutant strains lack mannotriose to pentaose (Man3-Man5), indicating a defect in the attachment of the third mannose, the second alpha-1,2-linked residue. Mannosyltransferase activity of kre2 mannosyltransferase demonstrated in vitro using synthetic substrates (39% relative activity) | Organism (ID 16504,16505): Saccharomyces cerevisiae YAH115, YAH116 Expressed in: P. pastoris, E. coli Full structure (ID 18036): CSDB ID(s): 43442 Molecule role (analog of): O-glycan | Romero et al. 1997 DOI: 10.1042/bj3210289 Lussier et al. 1997 DOI: 10.1074/jbc.272.24.15527 Hausler et al. 1992 PMID: 1495972 | |
| Synthesized dimer: aDManp(1-2)aDManp Donor (ID 35793): ?DManp(1-P-P-5)xXnucG Acceptor (ID 36021): aDManp(1-3)aDManp(1-1)Me Status: evidence in vitro
Confirmation methods: mutation (in recombinant protein); in vitro (membrane preparation) ID: 124 Notes: Low activity with this substrate. The Mnt1p mutant strains lack mannotriose to pentaose (Man3-Man5), indicating a defect in the attachment of the third mannose, the second alpha-1,2-linked residue. | Organism (ID 16504,16505): Saccharomyces cerevisiae YAH115, YAH116 Full structure (ID 18037): CSDB ID(s): 43443 Molecule role (analog of): O-glycan | Lussier et al. 1997 DOI: 10.1074/jbc.272.24.15527 Hausler et al. 1992 PMID: 1495972 | |
| Synthesized dimer: aDManp(1-2)aDManp Donor (ID 35793): ?DManp(1-P-P-5)xXnucG Acceptor (ID 36022): aDManp(1-4)aDManp(1-1)Me Status: evidence in vitro
Confirmation methods: mutation (in recombinant protein); in vitro (membrane preparation) ID: 125 Notes: Low activity with this substrate. The Mnt1p mutant strains lack mannotriose to pentaose (Man3-Man5), indicating a defect in the attachment of the third mannose, the second alpha-1,2-linked residue. | Organism (ID 16504,16505): Saccharomyces cerevisiae YAH115, YAH116 Full structure (ID 36023): Molecule role (analog of): O-glycan | ||
| Synthesized dimer: aDManp(1-2)aDManp Donor (ID 35793): ?DManp(1-P-P-5)xXnucG Acceptor (ID 36024): aDManp(1-6)aDManp(1-1)Me Status: evidence in vitro
Confirmation methods: mutation (in recombinant protein); in vitro (membrane preparationt) ID: 126 Notes: Low activity with this substrate. The Mnt1p mutant strains lack mannotriose to pentaose (Man3-Man5), indicating a defect in the attachment of the third mannose, the second alpha-1,2-linked residue. | Organism (ID 16504,16505): Saccharomyces cerevisiae YAH115, YAH116 Full structure (ID 36025): Molecule role (analog of): O-glycan | ||
| Synthesized dimer: aDManp(1-2)DManp Donor (ID 35793): ?DManp(1-P-P-5)xXnucG Acceptor (ID 35994): PEP(1-2)[?DManp(1-3)]x?Ser(1-2)PEP // PEP = protein fragment Status: indirect evidence in vivo
Confirmation methods: mutation ID: 127 Notes: The Mnt1p mutant strains lack mannotriose to pentaose (Man3-Man5), indicating a defect in the attachment of the third mannose, the second alpha-1,2-linked residue. | Organism (ID 16504,16505): Saccharomyces cerevisiae YAH115, YAH116 Full structure (ID 35995): CSDB ID(s): 40797 Molecule role: O-glycan | ||
| Synthesized dimer: aDManp(1-2)aDManp Donor (ID 35793): ?DManp(1-P-P-5)xXnucG Acceptor (ID 35997): PEP(1-2)[?DManp(1-3)]x?Thr(1-2)PEP // PEP = protein fragment Status: indirect evidence in vivo
Confirmation methods: mutation ID: 128 Notes: The Mnt1p mutant strains lack mannotriose to pentaose (Man3-Man5), indicating a defect in the attachment of the third mannose, the second alpha-1,2-linked residue. | Organism (ID 16504,16505): Saccharomyces cerevisiae YAH115, YAH116 Full structure (ID 35998): CSDB ID(s): 40796 Molecule role: O-glycan | ||
| Synthesized dimer: aDManp(1-2)aDManp Donor (ID 35793): ?DManp(1-P-P-5)xXnucG Acceptor (ID 36026): -?)?DManp(1- Status: semi-direct evidence in vivo
Confirmation methods: mutation; in vitro (membrane preparation) ID: 129 Notes: Kre2p is a mannosyltransferase adding the third mannose residue on O-linked mannose carbohydrate chains | Organism (ID 9927): Saccharomyces cerevisiae SEY6210 Full structure (ID 36027): CSDB ID(s): 2571, 2572, 40473, 42023, 42948, 43618, 44133, 44266, 44363, 46359, 46361, 47178, 101335, 116244, 130427, 280516 Molecule role (analog of): O-glycan | Lussier et al. 1996 DOI: 10.1074/jbc.271.18.11001 | |
| Synthesized dimer: aDManp(1-2)aDManp Donor (ID 35793): ?DManp(1-P-P-5)xXnucG Acceptor (ID 36002): ?DManp Status: evidence in vitro
Confirmation methods: expression in P. pastoris, in vitro (recombinant protein), expression in E. coli ID: 130 Notes: Kre2p is a mannosyltransferase adding the third mannose residue on O-linked mannose carbohydrate chains. membranes.The enzyme transfers mannose to mannose (15% relative activity) | Organism (ID 9605): Saccharomyces cerevisiae Expressed in: P. pastoris, E. coli Full structure (ID 5972): CSDB ID(s): 825, 1331, 2567, 3073, 3519, 40436, 40447, 40473, 40605, 40642, 41202, 41278, 42182, 42206, 42962, 43250, 43545, 43560, 43633, 43637, 44106, 44129, 44135, 44962, 45762, 45860, 46357, 47120, 48306, 48326, 48416, 48551, 100209, 104350, 104617, 104755, 105503, 116241, 125683, 130518, 136630, 141618, 216783 Molecule role (analog of): O-glycan | Romero et al. 1997 DOI: 10.1042/bj3210289 Herrmann et al. 1994 DOI: 10.1021/jo00100a043 | |
| Synthesized dimer: aDManp(1-2)aDManp Donor (ID 35793): ?DManp(1-P-P-5)xXnucG Acceptor (ID 17388): aDManp(1-2)aDManp Status: evidence in vitro
Confirmation methods: expression in P. pastoris, in vitro (recombinant protein) ID: 131 Notes: Kre2p is a mannosyltransferase adding the third mannose residue on O-linked mannose carbohydrate chains | Organism (ID 9605): Saccharomyces cerevisiae Expressed in: P. pastoris Full structure (ID 4419): CSDB ID(s): 41203, 42126, 43308, 45763, 45853, 49832, 49859, 100215, 104122, 105505, 110093, 111289, 116783, 125684, 245159, 280514 Molecule role (analog of): O-glycan | Romero et al. 1997 DOI: 10.1042/bj3210289 | |
| Synthesized dimer: aDManp(1-2)aDManp Donor (ID 35793): ?DManp(1-P-P-5)xXnucG Acceptor (ID 36007): /aDManp(1-2)/n=14-29/aDManp(1-?)[Ac(1-2)]?DGlcpN Status: evidence in vitro
Confirmation methods: expression in P. pastoris, in vitro (recombinant protein) ID: 132 Notes: Kre2p is a mannosyltransferase adding the third mannose residue on O-linked mannose carbohydrate chains | Organism (ID 9605): Saccharomyces cerevisiae Expressed in: P. pastoris Full structure (ID 36008): Molecule role (analog of): O-glycan | ||
| Synthesized dimer: aDManp(1-2)aDManp Donor (ID 35793): ?DManp(1-P-P-5)xXnucG Acceptor (ID 36028): aDManp(1-6)bDManp(1-1)Subst // Subst = 4-nitrophenol = SMILES C1=C{1}C(=CC=C1[N+](=O)[O-])O Status: evidence in vitro
Confirmation methods: expression in E. coli, in vitro (recombinant protein) ID: 135 Notes: mannosyltransferase activity of kre2 mannosyltransferase demonstrated in vitro using synthetic substrates (3,5% relative activity) | Organism (ID 9605): Saccharomyces cerevisiae Expressed in: E. coli Full structure (ID 36029): Molecule role (analog of): N-glycan | Herrmann et al. 1994 DOI: 10.1021/jo00100a043 | |
| Synthesized dimer: aDManp(1-2)aDManp Donor (ID 35793): ?DManp(1-P-P-5)xXnucG Acceptor (ID 36030): aDManp(1-6)aDManp(1-1)Subst // Subst = 4-nitrophenol = SMILES C1=C{1}C(=CC=C1[N+](=O)[O-])O Status: evidence in vitro
Confirmation methods: expression in E. coli, in vitro (recombinant protein) ID: 136 Notes: mannosyltransferase activity of kre2 mannosyltransferase demonstrated in vitro using synthetic substrates (3,7% relative activity) | Organism (ID 9605): Saccharomyces cerevisiae Expressed in: E. coli Full structure (ID 36031): CSDB ID(s): 9452, 9453 Molecule role (analog of): N-glycan | ||
| Synthesized dimer: aDManp(1-2)aDManp Donor (ID 35793): ?DManp(1-P-P-5)xXnucG Acceptor (ID 36032): aDManp(1-2)[F(1C-6)]aDRhap(1-1)Subst // Subst = 4-nitrophenol = SMILES C1=C{1}C(=CC=C1[N+](=O)[O-])O Status: evidence in vitro
Confirmation methods: expression in E. coli, in vitro (recombinant protein) ID: 137 Notes: mannosyltransferase activity of kre2 mannosyltransferase demonstrated in vitro using synthetic substrates (25% relative activity) | Organism (ID 9605): Saccharomyces cerevisiae Expressed in: E. coli Full structure (ID 36033): Molecule role (analog of): N-glycan | ||
| Synthesized dimer: aDManp(1-2)aDManp Donor (ID 35793): ?DManp(1-P-P-5)xXnucG Acceptor (ID 36034): aDManp(1-2)bDGlc(1-1)Subst // Subst = 4-nitrophenol = SMILES C1=C{1}C(=CC=C1[N+](=O)[O-])O Status: evidence in vitro
Confirmation methods: expression in E. coli, in vitro (recombinant protein) ID: 138 Notes: mannosyltransferase activity of kre2 mannosyltransferase demonstrated in vitro using synthetic substrates (26% relative activity) | Organism (ID 9605): Saccharomyces cerevisiae Expressed in: E. coli Full structure (ID 36035): CSDB ID(s): 24976 Molecule role (analog of): N-glycan | ||
| Synthesized dimer: aDManp(1-2)Subst // Subst = SMILES OCC(NC({2}[C@H]([C@H]1O)O)=O)[C@@H]1O Donor (ID 35793): ?DManp(1-P-P-5)xXnucG Acceptor (ID 36036): Subst // Subst = SMILES OCC(NC([C@H]([C@H]1O)O)=O)[C@@H]1O Status: evidence in vitro
Confirmation methods: expression in E. coli, in vitro (recombinant protein) ID: 139 Notes: mannosyltransferase activity of kre2 mannosyltransferase demonstrated in vitro using synthetic substrates (4.8% relative activity) | Organism (ID 9605): Saccharomyces cerevisiae Expressed in: E. coli Full structure (ID 36037): Molecule role (analog of): N-glycan | ||
| Synthesized dimer: aDManp(1-2)Subst // Subst = SMILES OCC(SC{2}[C@H]([C@H]1O)O)[C@@H]1O Donor (ID 35793): ?DManp(1-P-P-5)xXnucG Acceptor (ID 36038): Subst // Subst = SMILES OCC(SC[C@H]([C@H]1O)O)[C@@H]1O Status: evidence in vitro
Confirmation methods: expression in E. coli, in vitro (recombinant protein) ID: 140 Notes: mannosyltransferase activity of kre2 mannosyltransferase demonstrated in vitro using synthetic substrates (8.2% relative activity) | Organism (ID 9605): Saccharomyces cerevisiae Expressed in: E. coli Full structure (ID 36039): Molecule role (analog of): N-glycan | ||
| Synthesized dimer: aDManp(1-2)aDManp Donor (ID 35793): ?DManp(1-P-P-5)xXnucG Acceptor (ID 36040): aDManp(1-3)[Bn(7-1)Subst(1'-2)]x?Thr(1-2)x?Val(1-1)Me // Subst = carbonic acid = SMILES {51}O{1}C(=O)O Status: evidence in vitro
Confirmation methods: expression in E. coli, in vitro (recombinant protein) ID: 141 Notes: mannosyltransferase activity of kre2 mannosyltransferase demonstrated in vitro using synthetic substrates (71% relative activity) | Organism (ID 9605): Saccharomyces cerevisiae Expressed in: E. coli Full structure (ID 36041): CSDB ID(s): 40827, 43856, 124753, 135673, 141633 Molecule role (analog of): N-glycan | ||
| Synthesized dimer: aDManp(1-2)aDManp Donor (ID 35793): ?DManp(1-P-P-5)xXnucG Acceptor (ID 36042): aDManp(1-3)x?Thr(1-2)x?Val(1-1)Me Status: evidence in vitro
Confirmation methods: expression in E. coli, in vitro (recombinant protein) ID: 142 Notes: mannosyltransferase activity of kre2 mannosyltransferase demonstrated in vitro using synthetic substrates (68% relative activity) | Organism (ID 9605): Saccharomyces cerevisiae Expressed in: E. coli Full structure (ID 36043): CSDB ID(s): 40827, 43856, 124753, 135673, 141633 Molecule role (analog of): N-glycan | ||
| Synthesized dimer: aDManp(1-2)aDManp Donor (ID 35793): ?DManp(1-P-P-5)xXnucG Acceptor (ID 36044): aDManp(1-3)[Bn(7-1)Subst(1'-2)]x?Thr(1-2)x?Val(1-2)xXGly(1-2)x?Ala?(1-1)NH2 // Subst = carbonic acid = SMILES {51}O{1}C(=O)O Status: evidence in vitro
Confirmation methods: expression in E. coli, in vitro (recombinant protein) ID: 143 Notes: mannosyltransferase activity of kre2 mannosyltransferase demonstrated in vitro using synthetic substrates (55% relative activity) | Organism (ID 9605): Saccharomyces cerevisiae Expressed in: E. coli Full structure (ID 36045): CSDB ID(s): 40827, 43856, 124753, 135673, 141633 Molecule role (analog of): N-glycan | ||
| Synthesized dimer: aDManp(1-2)aDManp Donor (ID 35793): ?DManp(1-P-P-5)xXnucG Acceptor (ID 36046): tBu(1-1)Subst(1'-2)x?Tyr(1-2)[aDManp(1-3)]x?Thr(1-2)x?Val(1-1)Me // Subst = carbonic acid = SMILES {51}O{1}C(=O)O Status: evidence in vitro
Confirmation methods: expression in E. coli, in vitro (recombinant protein) ID: 144 Notes: mannosyltransferase activity of kre2 mannosyltransferase demonstrated in vitro using synthetic substrates (35% relative activity) | Organism (ID 9605): Saccharomyces cerevisiae Expressed in: E. coli Full structure (ID 36047): CSDB ID(s): 40827, 43856, 124753, 135673, 141633 Molecule role (analog of): N-glycan | ||
| Synthesized dimer: aDManp(1-2)aDManp Donor (ID 35793): ?DManp(1-P-P-5)xXnucG Acceptor (ID 36040): aDManp(1-3)[Bn(7-1)Subst(1'-2)]x?Thr(1-2)x?Val(1-1)Me // Subst = carbonic acid = SMILES {51}O{1}C(=O)O Status: evidence in vitro
Confirmation methods: expression in E. coli, in vitro (recombinant protein) ID: 145 Notes: mannosyltransferase activity of kre2 mannosyltransferase demonstrated in vitro using synthetic substrates (17% relative activity) | Organism (ID 9605): Saccharomyces cerevisiae Expressed in: E. coli Full structure (ID 36041): CSDB ID(s): 40827, 43856, 124753, 135673, 141633 Molecule role (analog of): N-glycan | ||
| Synthesized dimer: aDManp(1-2)aDManp Donor (ID 35793): ?DManp(1-P-P-5)xXnucG Acceptor (ID 36048): aDManp(1-2)aDManp(1-2)Subst // Subst = aminopyridine = SMILES n1cccc{2}c1N Status: evidence in vitro
Confirmation methods: in vitro (recombinant protein) ID: 146 Notes: Two fusion proteins, Pir1-HA-Kre2 and Pir2-FLAG-Mnn1, were constructed to display two kinds of mannosyltransferases, which are involved in yeast O-linked oligosaccharide synthesis | Organism (ID 16509): Saccharomyces cerevisiae SSY18 Full structure (ID 36049): CSDB ID(s): 41264 Molecule role (analog of): N-glycan,O-glycan | Abe et al. 2003 DOI: 10.1093/glycob/cwg014 | |
| Enzyme name: kre5p UniProt ID: P22023* CAZy family: GT24 Gene name: KRE5 Gene GenBank ID: 854514* | Synthesized dimer: bDGlcp(1-6)bDGlcp Donor (ID 34839): ?DGlcp(1-P-P-5)xXnucU Acceptor (ID 15613): -6)bDGlcp(1- Status: indirect evidence in vivo
Confirmation methods: mutation ID: 147 Notes: Saccharomyces cerevisiae kre5 mutants lack β-1,6-glucan, a polymer required for proper cell wall assembly and architecture | Organism (ID 9927,16510,16511,16512,16513,16514,16515,16516,16517,16518,16519,16520,16521): Saccharomyces cerevisiae SEY6210, TA405, HAB927, HAB928, HAB929, HAB930, HAB931, HAB932, HAB933, HAB934, HAB935, HAB936, HAB937 Full structure (ID 6162): CSDB ID(s): 5187, 7724, 7862, 8325, 9377, 20319, 26583, 40000, 40031, 40562, 40563, 40566, 40567, 40623, 40757, 40863, 40883, 40977, 40989, 41716, 41726, 41736, 41755, 41761, 41968, 42140, 42238, 42316, 42325, 42327, 42353, 42360, 42375, 42402, 42407, 42446, 42474, 42485, 42486, 42499, 42653, 42675, 42888, 43194, 43219, 43258, 43301, 43357, 43366, 43379, 43610, 43785, 43790, 43794, 43888, 44171, 44172, 44173, 44221, 44858, 44876, 44888, 44927, 44939, 45038, 45041, 45236, 45311, 45402, 45429, 45525, 45578, 45737, 45912, 45913, 45914, 46325, 46624, 47153, 47188, 47473, 47842, 47843, 48303, 48366, 48412, 48423, 48443, 48507, 48554, 48658, 48727, 48753, 48759, 48766, 48773, 48982, 49016, 49291, 50006, 50038, 50087, 50093, 50644, 50668, 50871, 51656, 51717, 51750, 51783, 67953, 101372, 124916, 125818, 126052, 131842, 138263, 140209, 143680, 143682, 149870, 149873 Molecule role (precursor of): peptidoglycan | Levinson et al. 2002 DOI: 10.1002/yea.908 Shahinian et al. 1998 PMID: 9611196 |
| Enzyme name: mnt2p UniProt ID: P53059* CAZy family: GT71 Gene name: MNT2 Gene GenBank ID: 852635* | Synthesized dimer: aDManp(1-3)aDManp Donor (ID 35793): ?DManp(1-P-P-5)xXnucG Acceptor (ID 36050): PEP(1-2)[aDManp(1-2)aDManp(1-2)?DManp(1-3)]x?Ser(1-2)PEP // PEP = protein fragment Status: indirect evidence in vivo
Confirmation methods: mutation ID: 148 Notes: Mnn1p, Mnt2p and Mnt3p together participate in addition of the 4nd and 5rd alpha-1,3-linked mannoses to O-linked carbohydrate chains. | Organism (ID 10607,16522): Saccharomyces cerevisiae BY4741, BY4742 Full structure (ID 35995): CSDB ID(s): 40797 Molecule role: O-glycan | Romero et al. 1999 PMID: 10521541 |
| Synthesized dimer: aDManp(1-3)aDManp Donor (ID 35793): ?DManp(1-P-P-5)xXnucG Acceptor (ID 36051): PEP(1-2)[aDManp(1-2)aDManp(1-2)?DManp(1-3)]x?Thr(1-2)PEP // PEP = protein fragment Status: indirect evidence in vivo
Confirmation methods: mutation ID: 149 Notes: Mnn1p, Mnt2p and Mnt3p together participate in addition of the 4nd and 5rd alpha-1,3-linked mannoses to O-linked carbohydrate chains. | Organism (ID 10607,12269): Saccharomyces cerevisiae BY4741, BY4743 Full structure (ID 35998): CSDB ID(s): 40796 Molecule role: O-glycan | ||
| Synthesized dimer: aDManp(1-3)aDManp Donor (ID 35793): ?DManp(1-P-P-5)xXnucG Acceptor (ID 36052): PEP(1-2)[aDManp(1-3)aDManp(1-2)aDManp(1-2)?DManp(1-3)]x?Ser(1-2)PEP // PEP = protein fragment Status: indirect evidence in vivo
Confirmation methods: mutation ID: 150 Notes: Mnn1p, Mnt2p and Mnt3p together participate in addition of the 4nd and 5rd alpha-1,3-linked mannoses to O-linked carbohydrate chains. | Organism (ID 10607,16523): Saccharomyces cerevisiae BY4741, BY4744 Full structure (ID 35995): CSDB ID(s): 40797 Molecule role: O-glycan | ||
| Synthesized dimer: aDManp(1-3)aDManp Donor (ID 35793): ?DManp(1-P-P-5)xXnucG Acceptor (ID 36053): PEP(1-2)[aDManp(1-3)aDManp(1-2)aDManp(1-2)?DManp(1-3)]x?Thr(1-2)PEP // PEP = protein fragment Status: indirect evidence in vivo
Confirmation methods: mutation ID: 151 Notes: Mnn1p, Mnt2p and Mnt3p together participate in addition of the 4nd and 5rd alpha-1,3-linked mannoses to O-linked carbohydrate chains. | Organism (ID 10607,16524): Saccharomyces cerevisiae BY4741, BY4745 Full structure (ID 35998): CSDB ID(s): 40796 Molecule role: O-glycan | ||
| Enzyme name: mnt3p UniProt ID: P40549* CAZy family: GT71 Gene name: MNT3 Gene GenBank ID: 854801* | Synthesized dimer: aDManp(1-3)aDManp Donor (ID 35793): ?DManp(1-P-P-5)xXnucG Acceptor (ID 36050): PEP(1-2)[aDManp(1-2)aDManp(1-2)?DManp(1-3)]x?Ser(1-2)PEP // PEP = protein fragment Status: indirect evidence in vivo
Confirmation methods: mutation ID: 152 Notes: Mnn1p, Mnt2p and Mnt3p together participate in addition of the 4nd and 5rd alpha-1,3-linked mannoses to O-linked carbohydrate chains. | Organism (ID 10607,16525): Saccharomyces cerevisiae BY4741, BY4746 Full structure (ID 35995): CSDB ID(s): 40797 Molecule role: O-glycan | |
| Synthesized dimer: aDManp(1-3)aDManp Donor (ID 35793): ?DManp(1-P-P-5)xXnucG Acceptor (ID 36051): PEP(1-2)[aDManp(1-2)aDManp(1-2)?DManp(1-3)]x?Thr(1-2)PEP // PEP = protein fragment Status: indirect evidence in vivo
Confirmation methods: mutation ID: 153 Notes: Mnn1p, Mnt2p and Mnt3p together participate in addition of the 4nd and 5rd alpha-1,3-linked mannoses to O-linked carbohydrate chains. | Organism (ID 10607,16526): Saccharomyces cerevisiae BY4741, BY4747 Full structure (ID 35998): CSDB ID(s): 40796 Molecule role: O-glycan | ||
| Synthesized dimer: aDManp(1-3)aDManp Donor (ID 35793): ?DManp(1-P-P-5)xXnucG Acceptor (ID 36052): PEP(1-2)[aDManp(1-3)aDManp(1-2)aDManp(1-2)?DManp(1-3)]x?Ser(1-2)PEP // PEP = protein fragment Status: indirect evidence in vivo
Confirmation methods: mutation ID: 154 Notes: Mnn1p, Mnt2p and Mnt3p together participate in addition of the 4nd and 5rd alpha-1,3-linked mannoses to O-linked carbohydrate chains. | Organism (ID 10607,16527): Saccharomyces cerevisiae BY4741, BY4748 Full structure (ID 35995): CSDB ID(s): 40797 Molecule role: O-glycan | ||
| Synthesized dimer: aDManp(1-3)aDManp Donor (ID 35793): ?DManp(1-P-P-5)xXnucG Acceptor (ID 36053): PEP(1-2)[aDManp(1-3)aDManp(1-2)aDManp(1-2)?DManp(1-3)]x?Thr(1-2)PEP // PEP = protein fragment Status: indirect evidence in vivo
Confirmation methods: mutation ID: 155 Notes: Mnn1p, Mnt2p and Mnt3p together participate in addition of the 4nd and 5rd alpha-1,3-linked mannoses to O-linked carbohydrate chains. | Organism (ID 10607,16528): Saccharomyces cerevisiae BY4741, BY4749 Full structure (ID 35998): CSDB ID(s): 40796 Molecule role: O-glycan | ||
| Enzyme name: dpm1p UniProt ID: P14020* CAZy family: GT2 Gene name: DPM1/SED3 Gene GenBank ID: 856313* | Synthesized dimer: DManp(1-?)P Donor (ID 35793): ?DManp(1-P-P-5)xXnucG Acceptor (ID 36054): P-1)Subst // Subst = dolichol Status: direct evidence in vivo
Confirmation methods: mutation; overexpression; expression in E. coli; in vitro (crude extract); in vitro (recombinant protein); in vitro (inhibition); in vitro (purified protein); in vitro (membrane preparation); mutation (in recombinant protein); ID: 156 Notes: The DPM1 gene is essential for viability in yeast since disruption of the gene is lethal. Synthesis of Dol-P-Man is required for the assembly of the full-length lipid-linked oligosaccharide precursor GlcNAc2Man9Glc3. | Organism (ID 9585,16432,16507,16529,16530,16531,16532,16533,16534,16535,16536,16537,16538): Saccharomyces cerevisiae X2180-1A, PRY238, DBY2068, PP-1B, PP-1A, PP-1B-10, XD2-7C, XD2-1C, DBY1315, 9933-20C, XD6-2B, THY4-13A, JZY250 Expressed in: E. coli Exact full structure is unknown Molecule role: O-glycan | Hausler et al. 1992 PMID: 1495972 Orlean et al. 1988 PMID: 3053713 Schutzbach et al. 1993 PMID: 8226966 Juchimiuk et al. 2010 DOI: 10.1002/yea.1803 Orlean et al. 1990 PMID: 2146492 Orlean et al. 1992 DOI: 10.1139/o92-067 Banerjee et al. 2005 DOI: 10.1074/jbc.M406962200 Forsee et al. 1997 DOI: 10.1111/j.1432-1033.1997.00953.x Haselbeck et al. 1989 DOI: 10.1111/j.1432-1033.1989.tb14774.x Zimmerman et al. 1993 PMID: 8344954 Xing et al. 2000 DOI: 10.1021/bi0003240 Lamani et al. 2006 DOI: 10.1093/glycob/cwj104 Gryz et al. 2019 DOI: 10.3390/ijms20123043 |
| Enzyme name: yur1p UniProt ID: P26725* CAZy family: GT15 Gene name: YUR1 Gene GenBank ID: 853302* | Synthesized dimer: aDManp(1-2)aDManp Donor (ID 35793): ?DManp(1-P-P-5)xXnucG Acceptor (ID 36000): aDManp(1-1)Me Status: semi-direct evidence in vivo
Confirmation methods: mutation; in vitro (membrane preparation) ID: 157 Notes: Ktr1p, Ktr2p, and Yur1p have mannosyltransferase activity in vitro | Organism (ID 9927): Saccharomyces cerevisiae SEY6210 Full structure (ID 6115): CSDB ID(s): 43442 Molecule role (analog of): O-glycan | Lussier et al. 1996 DOI: 10.1074/jbc.271.18.11001 |
| Synthesized dimer: aDManp(1-2)aDManp Donor (ID 35793): ?DManp(1-P-P-5)xXnucG Acceptor (ID 36055): -?)aDManp(1- Status: semi-direct evidence in vivo
Confirmation methods: mutation; in vitro (membrane preparation) ID: 158 Notes: Ktr1p, Ktr2p, and Yur1p have mannosyltransferase activity in vitro | Organism (ID 9927): Saccharomyces cerevisiae SEY6210 Full structure (ID 36027): CSDB ID(s): 2571, 2572, 40473, 42023, 42948, 43618, 44133, 44266, 44363, 46359, 46361, 47178, 101335, 116244, 130427, 280516 Molecule role (analog of): O-glycan | ||
| Enzyme name: mnn1p UniProt ID: P39106* CAZy family: GT71 Gene name: MNN1 Gene GenBank ID: 856718* | Synthesized dimer: aDManp(1-3)aDManp Donor (ID 35793): ?DManp(1-P-P-5)xXnucG Acceptor (ID 36050): PEP(1-2)[aDManp(1-2)aDManp(1-2)?DManp(1-3)]x?Ser(1-2)PEP // PEP = protein fragment Status: indirect evidence in vivo
Confirmation methods: mutation ID: 159 Notes: Mnn1p, Mnt2p and Mnt3p together participate in addition of the 4nd and 5rd alpha-1,3-linked mannoses to O-linked carbohydrate chains. | Organism (ID 10607,16522): Saccharomyces cerevisiae BY4741, BY4742 Full structure (ID 35995): CSDB ID(s): 40797 Molecule role: O-glycan | Lussier et al. 1997 DOI: 10.1074/jbc.272.24.15527 Romero et al. 1999 PMID: 10521541 |
| Synthesized dimer: aDManp(1-3)aDManp Donor (ID 35793): ?DManp(1-P-P-5)xXnucG Acceptor (ID 36051): PEP(1-2)[aDManp(1-2)aDManp(1-2)?DManp(1-3)]x?Thr(1-2)PEP // PEP = protein fragment Status: indirect evidence in vivo
Confirmation methods: mutation ID: 160 Notes: Mnn1p, Mnt2p and Mnt3p together participate in addition of the 4nd and 5rd alpha-1,3-linked mannoses to O-linked carbohydrate chains. | Organism (ID 10607,12269): Saccharomyces cerevisiae BY4741, BY4743 Full structure (ID 35998): CSDB ID(s): 40796 Molecule role: O-glycan | ||
| Synthesized dimer: aDManp(1-3)aDManp Donor (ID 35793): ?DManp(1-P-P-5)xXnucG Acceptor (ID 36052): PEP(1-2)[aDManp(1-3)aDManp(1-2)aDManp(1-2)?DManp(1-3)]x?Ser(1-2)PEP // PEP = protein fragment Status: indirect evidence in vivo
Confirmation methods: mutation ID: 161 Notes: Mnn1p, Mnt2p and Mnt3p together participate in addition of the 4nd and 5rd alpha-1,3-linked mannoses to O-linked carbohydrate chains. | Organism (ID 10607,16523): Saccharomyces cerevisiae BY4741, BY4744 Full structure (ID 35995): CSDB ID(s): 40797 Molecule role: O-glycan | ||
| Synthesized dimer: aDManp(1-3)aDManp Donor (ID 35793): ?DManp(1-P-P-5)xXnucG Acceptor (ID 36053): PEP(1-2)[aDManp(1-3)aDManp(1-2)aDManp(1-2)?DManp(1-3)]x?Thr(1-2)PEP // PEP = protein fragment Status: indirect evidence in vivo
Confirmation methods: mutation ID: 162 Notes: Mnn1p, Mnt2p and Mnt3p together participate in addition of the 4nd and 5rd alpha-1,3-linked mannoses to O-linked carbohydrate chains. | Organism (ID 10607,16524): Saccharomyces cerevisiae BY4741, BY4745 Full structure (ID 35998): CSDB ID(s): 40796 Molecule role: O-glycan | ||
| Synthesized dimer: aDManp(1-3)aDManp Donor (ID 35793): ?DManp(1-P-P-5)xXnucG Acceptor (ID 36056): PEP(1-2)[aDManp(1-2)aDManp(1-2)aDManp(1-3)[aDManp(1-3)[aDManp(1-2)aDManp(1-6)]aDManp(1-6)]bDManp(1-4)[Ac(1-2)]bDGlcpN(1-4)[Ac(1-2)]?DGlcpN1N(1-4)]x?Asn(1-2)PEP // PEP = protein fragment Status: indirect evidence in vivo
Confirmation methods: mutation ID: 163 Notes: The structures of the N-linked oligosaccharides attached to invertase in och1 cells, Δoch1 mnn1 and Δoch1 mnn1 alg3 mutants were determined | Organism (ID 16454,16539,16540,16541,16542,16543,16544,16545,16546,16547,16548,16549,16550): Saccharomyces cerevisiae W303-1A, YN3-1D, YN5-2C, YN1-28A, YN1-28B, YN4-18A, YS57-5A, YS57-2C, YN2-12A, YN2-14A, YN2-15C, PRY90, EBY100 Full structure (ID 36057): Molecule role: N-glycan | Nakanishi-Shindo et al. 1993 PMID: 8253757 Manas et al. 1998 DOI: 10.1016/s0304-4165(97)00160-8 Zhou et al. 2007 DOI: 10.1007/s00284-006-0585-5 | |
| Synthesized dimer: aDManp(1-3)aDManp Donor (ID 35793): ?DManp(1-P-P-5)xXnucG Acceptor (ID 36058): PEP(1-2)[aDManp(1-3)aDManp(1-2)aDManp(1-2)aDManp(1-3)[aDManp(1-3)[aDManp(1-2)aDManp(1-6)]aDManp(1-6)]bDManp(1-4)[Ac(1-2)]bDGlcpN(1-4)[Ac(1-2)]?DGlcpN1N(1-4)]x?Asn(1-2)PEP // PEP = protein fragment Status: indirect evidence in vivo
Confirmation methods: mutation ID: 164 Notes: The structures of the N-linked oligosaccharides attached to invertase in och1 cells, Δoch1 mnn1 and Δoch1 mnn1 alg3 mutants were determined | Organism (ID 16539,16540,16541,16542,16543,16544,16545,16546,16547,16548,16549): Saccharomyces cerevisiae YN3-1D, YN5-2C, YN1-28A, YN1-28B, YN4-18A, YS57-5A, YS57-2C, YN2-12A, YN2-14A, YN2-15C, PRY90 Full structure (ID 36059): CSDB ID(s): 136849 Molecule role: N-glycan | Nakanishi-Shindo et al. 1993 PMID: 8253757 | |
| Synthesized dimer: aDManp(1-3)aDManp Donor (ID 35793): ?DManp(1-P-P-5)xXnucG Acceptor (ID 36060): PEP(1-2)[aDManp(1-2)aDManp(1-2)[aDManp(1-2)aDManp(1-6)]aDManp(1-3)[aDManp(1-3)[aDManp(1-2)aDManp(1-6)]aDManp(1-6)]bDManp(1-4)[Ac(1-2)]bDGlcpN(1-4)[Ac(1-2)]?DGlcpN1N(1-4)]x?Asn(1-2)PEP // PEP = protein fragment Status: indirect evidence in vivo
Confirmation methods: mutation ID: 165 Notes: The structures of the N-linked oligosaccharides attached to invertase in och1 cells, Δoch1 mnn1 and Δoch1 mnn1 alg3 mutants were determined | Organism (ID 16539,16540,16541,16542,16543,16544,16545,16546,16547,16548,16549): Saccharomyces cerevisiae YN3-1D, YN5-2C, YN1-28A, YN1-28B, YN4-18A, YS57-5A, YS57-2C, YN2-12A, YN2-14A, YN2-15C, PRY90 Full structure (ID 36061): CSDB ID(s): 136852 Molecule role: N-glycan | ||
| Synthesized dimer: aDManp(1-3)aDManp Donor (ID 35793): ?DManp(1-P-P-5)xXnucG Acceptor (ID 36062): PEP(1-2)[aDManp(1-3)aDManp(1-2)aDManp(1-2)[aDManp(1-2)aDManp(1-6)]aDManp(1-3)[aDManp(1-3)[aDManp(1-2)aDManp(1-6)]aDManp(1-6)]bDManp(1-4)[Ac(1-2)]bDGlcpN(1-4)[Ac(1-2)]?DGlcpN1N(1-4)]x?Asn(1-2)PEP // PEP = protein fragment Status: indirect evidence in vivo
Confirmation methods: mutation ID: 166 Notes: The structures of the N-linked oligosaccharides attached to invertase in och1 cells, Δoch1 mnn1 and Δoch1 mnn1 alg3 mutants were determined | Organism (ID 16539,16540,16541,16542,16543,16544,16545,16546,16547,16548,16549): Saccharomyces cerevisiae YN3-1D, YN5-2C, YN1-28A, YN1-28B, YN4-18A, YS57-5A, YS57-2C, YN2-12A, YN2-14A, YN2-15C, PRY90 Full structure (ID 36063): CSDB ID(s): 136853 Molecule role: N-glycan | ||
| Synthesized dimer: aDManp(1-3)aDManp Donor (ID 35793): ?DManp(1-P-P-5)xXnucG Acceptor (ID 36064): aDManp(1-2)aDManp(1-2)xDMan-ol Status: evidence in vitro
Confirmation methods: mutation; in vitro (membrane preparation) ID: 167 Notes: Mannosyltransferase I catalyzes the transfer of mannose units from GDP-mannose to the outer polysaccharide chain of certain secreted mannoproteins, forming a 1 -3 glycosidic linkages. The rM3 preparation used as an acceptor contained Mana1->2Mana1->2mannitol and approximately 20% Mana1->3Mana1->2mannitol (Stewart and Ballou, 1968). | Organism (ID 9585,16551,16552,16553): Saccharomyces cerevisiae X2180-1A, X2180-1B, XW451-3B, ZA396 Full structure (ID 9822): CSDB ID(s): 26452, 45859, 116788 Molecule role (analog of): N-glycan | Cunningham et al. 1989 DOI: 10.1002/yea.320050105 | |
| Synthesized dimer: aDManp(1-3)aDManp Donor (ID 35793): ?DManp(1-P-P-5)xXnucG Acceptor (ID 36065): aDManp(1-3)aDManp(1-2)xDMan-ol Status: evidence in vitro
Confirmation methods: mutation; in vitro (membrane preparation) ID: 168 Notes: Mannosyltransferase I catalyzes the transfer of mannose units from GDP-mannose to the outer polysaccharide chain of certain secreted mannoproteins, forming a 1 -3 glycosidic linkages. The rM3 preparation used as an acceptor contained Mana1->2Mana1->2mannitol and approximately 20% Mana1->3Mana1->2mannitol (Stewart and Ballou, 1968). | Organism (ID 9585,16551,16552,16553): Saccharomyces cerevisiae X2180-1A, X2180-1B, XW451-3B, ZA396 Full structure (ID 36066): CSDB ID(s): 26452, 45859, 116788 Molecule role (analog of): N-glycan | ||
| Synthesized dimer: aDManp(1-3)aDManp Donor (ID 35793): ?DManp(1-P-P-5)xXnucG Acceptor (ID 36067): -6)aDManp(1-6)[aDManp(1-2)]aDManp(1-6)[aDManp(1-2)aDManp(1-2)]aDManp(1-6)[aDManp(1-2)aDManp(1-2)]aDManp(1-6)[aDManp(1-2)[aDManp(1-P-6)]aDManp(1-2)]aDManp(1- Status: direct evidence in vivo
Confirmation methods: mutation; overexpression; in vitro (membrane preparation); in vitro (inhibition) ID: 169 Notes: The in vitro reactions were carried using endogeneous substrates. Mnn1 supposedly participates in the synthesis of side branches in the outer chain of mannoprotein carbohydrates. | Organism (ID 9585,9927,10878,16494,16554,16555,16556,16557,16558,16559,16560,16561,16562,16563,16564,16565): Saccharomyces cerevisiae X2180-1A, SEY6210, LB1-3B, SEY5188, XCY42-30D, TVY1, SF274 3A, SF294-2B, HMSF-1, SF292-1A, GPY382, GPY-383, TGY31, TGY32, TGY33, LB1-10B Full structure (ID 16661): CSDB ID(s): 44104, 117564 Molecule role: N-glycan,O-glycan | Cunningham et al. 1989 DOI: 10.1002/yea.320050105 Graham et al. 1994 DOI: 10.1083/jcb.127.3.667 Graham et al. 1995 DOI: 10.1091/mbc.6.7.809 Reynolds et al. 1998 DOI: 10.1083/jcb.143.4.935 Ballou et al. 1973 PMID: 4124122 Harrington et al. 1981 DOI: 10.1099/00221287-125-2-407 Parodi et al. 1979 PMID: 381304 Lewis et al. 1991 PMID: 2022642 | |
| Synthesized dimer: aDManp(1-3)aDManp Donor (ID 35793): ?DManp(1-P-P-5)xXnucG Acceptor (ID 17388): aDManp(1-2)aDManp Status: evidence in vitro
Confirmation methods: in vitro (mutation); in vitro (purified protein) ID: 170 Notes: Mutagenesis of Mnn1p shows that two conserved aspartate residues of the motif are absolutely essential for Mnn1p activity both in vivo and in vitro | Organism (ID 9927): Saccharomyces cerevisiae SEY6210 Full structure (ID 36068): CSDB ID(s): 40603, 40624 Molecule role: N-glycan,O-glycan | Parodi et al. 1979 PMID: 381304 Lewis et al. 1991 PMID: 2022642 Wiggins et al. 1998 DOI: 10.1073/pnas.95.14.7945 | |
| Synthesized dimer: aDManp(1-3)aDManp Donor (ID 35793): ?DManp(1-P-P-5)xXnucG Acceptor (ID 36069): aDManp(1-2)aDManp(1-2)aDManp(1-2)Subst // Subst = aminopyridine = SMILES n1cccc{2}c1N Status: evidence in vitro
Confirmation methods: in vitro (recombinant protein) ID: 171 Notes: Two fusion proteins, Pir1-HA-Kre2 and Pir2-FLAGMnn1, were constructed to display two kinds of mannosyltransferases, which are involved in yeast O-linked oligosaccharide synthesis | Organism (ID 16509): Saccharomyces cerevisiae SSY18 Full structure (ID 36070): Molecule role (analog of): N-glycan,O-glycan | Abe et al. 2003 DOI: 10.1093/glycob/cwg014 | |
| Synthesized dimer: aDManp(1-3)aDManp Donor (ID 35793): ?DManp(1-P-P-5)xXnucG Acceptor (ID 36048): aDManp(1-2)aDManp(1-2)Subst // Subst = aminopyridine = SMILES n1cccc{2}c1N Status: evidence in vitro
Confirmation methods: in vitro (recombinant protein) ID: 172 Notes: Two fusion proteins, Pir1-HA-Kre2 and Pir2-FLAGMnn1, were constructed to display two kinds of mannosyltransferases, which are involved in yeast O-linked oligosaccharide synthesis | Organism (ID 16509): Saccharomyces cerevisiae SSY18 Full structure (ID 36071): Molecule role (analog of): N-glycan,O-glycan | ||
| Enzyme name: mnn2p UniProt ID: P38069* CAZy family: GT71 Gene name: MNN2 Gene GenBank ID: 852303* | Synthesized dimer: aDManp(1-2)aDManp Donor (ID 35793): ?DManp(1-P-P-5)xXnucG Acceptor (ID 36072): aDManp(1-6)aDManp Status: evidence in vitro
Confirmation methods: in vitro (purified protein) ID: 176 Notes: Mnn2p is responsible for adding the first a-1,2-linked mannose to a-1,6-linked backbone. The exact position and degree of mannosylation is unknown | Organism (ID 9649,9927,10877,10878): Saccharomyces cerevisiae X2180, SEY6210, LB65-5D, LB1-3B Full structure (ID 36073): CSDB ID(s): 101329, 111290 Molecule role (analog of): N-glycan | Morimoto et al. 2015 DOI: 10.1111/mmi.12896 Rayner et al. 1998 DOI: 10.1074/jbc.273.41.26836 |
| Synthesized dimer: aDManp(1-2)aDManp Donor (ID 35793): ?DManp(1-P-P-5)xXnucG Status: indirect evidence in vivo
Confirmation methods: mutation ID: 177 Notes: Mnn2p is responsible for adding the first a-1,2-linked mannose to a-1,6-linked backbone. The exact position and degree of mannosylation is unknown | Organism (ID 9927,10877,10878,16566): Saccharomyces cerevisiae SEY6210, LB65-5D, LB1-3B, X2181 Full structure (ID 36074): CSDB ID(s): 44104, 45422 Molecule role (analog of): N-glycan | ||
| Synthesized dimer: aDManp(1-2)aDManp Donor (ID 35793): ?DManp(1-P-P-5)xXnucG Acceptor (ID 36075): PEP(1-2)[aDManp(1-2)aDManp(1-2)[/aDManp(1-6)/n=50/aDManp(1-6)]aDManp(1-3)[aDManp(1-3)[aDManp(1-2)aDManp(1-6)]aDManp(1-6)]bDManp(1-4)[Ac(1-2)]bDGlcpN(1-4)[Ac(1-2)]bDGlcpN1N(1-4)]x?Asn(1-2)PEP // PEP = protein fragment Status: direct evidence in vivo
Confirmation methods: mutation; complementation; in vitro (membrane preparation) ID: 179 Notes: Mnn2p catalyzes the transfer of first mannose residue to mannan main chain to form the side chain. Mnn2 mutant has unbranched mannan | Organism (ID 9585,9649,10607,16551,16567,16568,16569,16570,16571,16572): Saccharomyces cerevisiae X2180-1A, X2180, BY4741, X2180-1B, 4484-24D, X2180-1A-5, X2180-1A-7, X2180-1A-9, LBl-22D, LBI-34B Full structure (ID 36076): Molecule role (precursor of): N-glycan | Ballou et al. 1973 PMID: 4124122 Parodi et al. 1979 PMID: 381304 Hirayama et al. 2012 DOI: 10.1016/j.bbrc.2012.02.068 Raschke et al. 1973 PMID: 4578088 Ballou et al. 1975 PMID: 1097420 Cohen et al. 1982 PMID: 6802821 Orlean et al. 2012 DOI: 10.1534/genetics.112.144485 | |
| Enzyme name: mnn5p UniProt ID: P46982* CAZy family: GT71 Gene name: MNN5 Gene GenBank ID: 853253* | Synthesized dimer: aDManp(1-2)aDManp Donor (ID 35793): ?DManp(1-P-P-5)xXnucG Acceptor (ID 36077): PEP(1-2)[aDManp(1-2)aDManp(1-2)[/[aDManp(1-2)]aDManp(1-6)/n=50/aDManp(1-6)]aDManp(1-3)[aDManp(1-3)[aDManp(1-2)aDManp(1-6)]aDManp(1-6)]bDManp(1-4)[Ac(1-2)]bDGlcpN(1-4)[Ac(1-2)]bDGlcpN1N(1-4)]x?Asn(1-2)PEP // PEP = protein fragment Status: indirect evidence in vivo
Confirmation methods: mutation ID: 183 Notes: The properties of the mnn5 mutant are consistent with the loss of the a1-2-mannosyltransferase II activity that is responsible for the addition of the second mannose to the polysaccharide side chains | Organism (ID 9585,16551): Saccharomyces cerevisiae X2180-1A, X2180-1B Full structure (ID 36078): Molecule role (precursor of): N-glycan | Hirayama et al. 2012 DOI: 10.1016/j.bbrc.2012.02.068 Cohen et al. 1982 PMID: 6802821 Orlean et al. 2012 DOI: 10.1534/genetics.112.144485 Cohen et al. 1980 PMID: 6995454 |
| Synthesized dimer: aDManp(1-2)aDManp Donor (ID 35793): ?DManp(1-P-P-5)xXnucG Status: evidence in vitro
Confirmation methods: in vitro (purified protein) ID: 184 Notes: Mnn5p is responsible for adding the second a-1,2-linked mannose to a-1,6-linked backbone. The exact position and degree of mannosylation is unknown | Organism (ID 9649,9927,10877,10878): Saccharomyces cerevisiae X2180, SEY6210, LB65-5D, LB1-3B Full structure (ID 36079): CSDB ID(s): 101331 Molecule role (analog of, precursor of): N-glycan | Rayner et al. 1998 DOI: 10.1074/jbc.273.41.26836 | |
| Synthesized dimer: aDManp(1-2)aDManp Donor (ID 35793): ?DManp(1-P-P-5)xXnucG Status: indirect evidence in vivo
Confirmation methods: mutation ID: 185 Notes: Mnn5p is responsible for adding the second a-1,2-linked mannose to a-1,6-linked backbone. The exact position and degree of mannosylation is unknown | Organism (ID 9927,10877,10878,16566): Saccharomyces cerevisiae SEY6210, LB65-5D, LB1-3B, X2181 Full structure (ID 36074): CSDB ID(s): 44104, 45422 Molecule role (analog of, precursor of): N-glycan | ||
| Enzyme name: mnn9p UniProt ID: P39107* CAZy family: GT62 Gene name: MNN9 Gene GenBank ID: 856057* | Synthesized dimer: aDManp(1-6)aDManp Donor (ID 35793): ?DManp(1-P-P-5)xXnucG Acceptor (ID 36072): aDManp(1-6)aDManp Status: evidence in vitro
Confirmation methods: in vitro (purified protein); expression in P. pastoris ID: 186 Notes: Mnn9p and Van1p are subunits of M-Pol I complex, that adds up to 10 a-1,6 linked mannose residues, forming the mannan backbone | Organism (ID 16573): Saccharomyces cerevisiae X21801Bα Expressed in: P. pastoris Full structure (ID 7985): CSDB ID(s): 23161, 45423, 45854, 101328, 104620, 111291, 137234 Molecule role (analog of, precursor of): N-glycan | Rodionov et al. 2009 DOI: 10.1016/j.pep.2009.02.013 Yip et al. 1994 |
| Synthesized dimer: aDManp(1-6)aDManp Donor (ID 35793): ?DManp(1-P-P-5)xXnucG Acceptor (ID 36080): aDManp(1-6)aDManp(1-6)aDManp Status: evidence in vitro
Confirmation methods: in vitro (purified protein); expression in P. pastoris ID: 187 Notes: Mnn9p and Van1p are subunits of M-Pol I complex, that adds up to 10 a-1,6 linked mannose residues, forming the mannan backbone | Organism (ID 16573): Saccharomyces cerevisiae X21801Bα Expressed in: P. pastoris Full structure (ID 7986): CSDB ID(s): 23162, 45423, 45854, 110094, 118703, 140208, 147308, 147723 Molecule role (analog of, precursor of): N-glycan | ||
| Synthesized dimer: aDManp(1-6)aDManp Donor (ID 35793): ?DManp(1-P-P-5)xXnucG Acceptor (ID 36081): aDManp(1-6)aDManp(1-6)aDManp(1-6)aDManp Status: evidence in vitro
Confirmation methods: in vitro (purified protein); expression in P. pastoris ID: 188 Notes: Mnn9p and Van1p are subunits of M-Pol I complex, that adds up to 10 a-1,6 linked mannose residues, forming the mannan backbone | Organism (ID 16573): Saccharomyces cerevisiae X21801Bα Expressed in: P. pastoris Full structure (ID 36082): CSDB ID(s): 592, 12958, 12971, 40003, 40425, 40694, 40762, 41299, 41865, 42227, 43302, 44107, 44118, 45423, 45854, 110094, 118209, 118703, 140208, 147308, 147723 Molecule role (analog of, precursor of): N-glycan | ||
| Synthesized dimer: aDManp(1-6)aDManp Donor (ID 35793): ?DManp(1-P-P-5)xXnucG Acceptor (ID 36083): aDManp(1-6)aDManp(1-6)aDManp(1-6)aDManp(1-6)aDManp Status: evidence in vitro
Confirmation methods: in vitro (purified protein); expression in P. pastoris ID: 189 Notes: Mnn9p and Van1p are subunits of M-Pol I complex, that adds up to 10 a-1,6 linked mannose residues, forming the mannan backbone | Organism (ID 16573): Saccharomyces cerevisiae X21801Bα Expressed in: P. pastoris Full structure (ID 36084): CSDB ID(s): 592, 12958, 12971, 40003, 40425, 40694, 40762, 41299, 41865, 42227, 43302, 44107, 44118, 45423, 45854, 110094, 118209, 118703, 140208, 147308, 147723 Molecule role (analog of, precursor of): N-glycan | ||
| Synthesized dimer: aDManp(1-6)aDManp Donor (ID 35793): ?DManp(1-P-P-5)xXnucG Acceptor (ID 36085): aDManp(1-6)aDManp(1-6)aDManp(1-6)aDManp(1-6)aDManp(1-6)aDManp Status: evidence in vitro
Confirmation methods: in vitro (purified protein); expression in P. pastoris ID: 190 Notes: Mnn9p and Van1p are subunits of M-Pol I complex, that adds up to 10 a-1,6 linked mannose residues, forming the mannan backbone | Organism (ID 16573): Saccharomyces cerevisiae X21801Bα Expressed in: P. pastoris Full structure (ID 36086): CSDB ID(s): 592, 12958, 12971, 40003, 40425, 40694, 40762, 41299, 41865, 42227, 43302, 44107, 44118, 45423, 45854, 110094, 118209, 118703, 140208, 147308, 147723 Molecule role (analog of, precursor of): N-glycan | ||
| Synthesized dimer: aDManp(1-6)aDManp Donor (ID 35793): ?DManp(1-P-P-5)xXnucG Acceptor (ID 36072): aDManp(1-6)aDManp Status: evidence in vitro
Confirmation methods: in vitro (purified protein) ID: 191 Notes: Mnn9p and Anp1p are subunits of M-Pol II complex, that adds up to 50 a-1,6 linked mannose residues, forming the mannan backbone | Organism (ID 9927,16485,16574): Saccharomyces cerevisiae SEY6210, SEY6211, AA662 Full structure (ID 7985): CSDB ID(s): 23161, 45423, 45854, 101328, 104620, 111291, 117559, 137234 Molecule role (analog of, precursor of): N-glycan | Jungmann et al. 1998 DOI: 10.1093/emboj/17.2.423 | |
| Synthesized dimer: aDManp(1-6)aDManp Donor (ID 35793): ?DManp(1-P-P-5)xXnucG Acceptor (ID 36080): aDManp(1-6)aDManp(1-6)aDManp Status: evidence in vitro
Confirmation methods: in vitro (purified protein); ID: 192 Notes: Mnn9p and Anp1p are subunits of M-Pol II complex, that adds up to 50 a-1,6 linked mannose residues, forming the mannan backbone | Organism (ID 9927,16485,16575): Saccharomyces cerevisiae SEY6210, SEY6211, AA663 Full structure (ID 7986): CSDB ID(s): 23162, 45423, 45854, 110094, 117559, 118703, 140208, 147308, 147723 Molecule role (analog of, precursor of): N-glycan | ||
| Synthesized dimer: aDManp(1-6)aDManp Donor (ID 35793): ?DManp(1-P-P-5)xXnucG Acceptor (ID 36081): aDManp(1-6)aDManp(1-6)aDManp(1-6)aDManp Status: evidence in vitro
Confirmation methods: in vitro (purified protein); ID: 193 Notes: Mnn9p and Anp1p are subunits of M-Pol II complex, that adds up to 50 a-1,6 linked mannose residues, forming the mannan backbone | Organism (ID 9927,16485,16576): Saccharomyces cerevisiae SEY6210, SEY6211, AA664 Full structure (ID 36082): CSDB ID(s): 592, 12958, 12971, 40003, 40425, 40694, 40762, 41299, 41865, 42227, 43302, 44107, 44118, 45423, 45854, 110094, 118209, 118703, 140208, 147308, 147723 Molecule role (analog of, precursor of): N-glycan | ||
| Enzyme name: mnn9p UniProt ID: P39107 CAZy family: GT62 Gene name: MNN9 Gene GenBank ID: 856057 | Synthesized dimer: aDManp(1-6)DManp Donor (ID 35793): ?DManp(1-P-P-5)xXnucG Acceptor (ID 36002): ?DManp Status: semi-direct evidence in vivo
Confirmation methods: in vitro (purified protein); mutation; expression in E. coli ID: 194 Notes: Recombinant Mnn9p alone (without Van1p) is able to transfer mannose from the sugar donor onto the acceptor substrates | Organism (ID 10607,16497): Saccharomyces cerevisiae BY4741, S288c Expressed in: E. coli Full structure (ID 36087): CSDB ID(s): 22704, 26964, 26965, 40756, 42205, 104618 Molecule role (analog of, precursor of): N-glycan | Striebeck at al. 2013 DOI: 10.1098/rsob.130022 |
| Synthesized dimer: aDManp(1-6)aDManp Donor (ID 35793): ?DManp(1-P-P-5)xXnucG Acceptor (ID 36072): aDManp(1-6)aDManp Status: semi-direct evidence in vivo
Confirmation methods: in vitro (purified protein); mutation; expression in E. coli ID: 195 Notes: Recombinant Mnn9p alone (without Van1p) is able to transfer mannose from the sugar donor onto the acceptor substrates | Organism (ID 10607,16497): Saccharomyces cerevisiae BY4741, S288c Expressed in: E. coli Full structure (ID 7985): CSDB ID(s): 23161, 45423, 45854, 101328, 104620, 111291, 117559, 137234 Molecule role (analog of, precursor of): N-glycan | ||
| Enzyme name: mnn9p UniProt ID: P39107* CAZy family: GT62 Gene name: MNN9 Gene GenBank ID: 856057* | Synthesized dimer: aDManp(1-6)aDManp Donor (ID 35793): ?DManp(1-P-P-5)xXnucG Acceptor (ID 36088): PEP(1-2)[aDManp(1-2)aDManp(1-2)[aDManp(1-6)]aDManp(1-3)[aDManp(1-3)[aDManp(1-2)aDManp(1-6)]aDManp(1-6)]bDManp(1-4)[Ac(1-2)]bDGlcpN(1-4)[Ac(1-2)]bDGlcpN1N(1-4)]x?Asn(1-2)PEP // PEP = protein fragment Status: direct evidence in vivo
Confirmation methods: mutation; in vitro (purified protein) ID: 196 Notes: Both Mnn9p and Van1p participate directly in the extension of the mannan backbone by the M-Pol I complex | Organism (ID 9927,10666,16485,16577): Saccharomyces cerevisiae SEY6210, KA31-1A, SEY6211, Y190 Full structure (ID 36089): CSDB ID(s): 236854 Molecule role (precursor of): N-glycan | Nakanishi-Shindo et al. 1993 PMID: 8253757 Orlean et al. 2012 DOI: 10.1534/genetics.112.144485 Stolz et al. 2002 DOI: 10.1074/jbc.M208023200 Todorow et al. 2000 DOI: 10.1073/pnas.250472397 Okamoto et al. 2008 DOI: 10.1128/EC.00333-07 Schmidt et al. 2005 DOI: 10.1002/yea.1242 Kojima et al. 1999 DOI: 10.1271/bbb.63.1970 Hashimoto et al. 1997 DOI: 10.1006/bbrc.1997.7888 |
| Synthesized dimer: aDManp(1-6)aDManp Donor (ID 35793): ?DManp(1-P-P-5)xXnucG Acceptor (ID 36072): aDManp(1-6)aDManp Status: evidence in vitro
Confirmation methods: in vitro (mutation); in vitro (membrane preparation) ID: 198 Notes: Both Mnn9p and Van1p participate directly in the extension of the mannan backbone by the M-Pol I complex | Organism (ID 9927,16485): Saccharomyces cerevisiae SEY6210, SEY6211 Full structure (ID 7985): CSDB ID(s): 23161, 45423, 45854, 101328, 104620, 111291, 117559, 137234 Molecule role (analog of): N-glycan | Hirayama et al. 2012 DOI: 10.1016/j.bbrc.2012.02.068 Stolz et al. 2002 DOI: 10.1074/jbc.M208023200 | |
| Synthesized dimer: aDManp(1-2)aDManp Donor (ID 35793): ?DManp(1-P-P-5)xXnucG Acceptor (ID 36072): aDManp(1-6)aDManp Status: evidence in vitro
Confirmation methods: in vitro (mutation); in vitro (membrane preparation) ID: 199 Notes: Both Mnn9p and Van1p participate directly in the extension of the mannan backbone by the M-Pol I complex | Organism (ID 9927,16485): Saccharomyces cerevisiae SEY6210, SEY6211 Full structure (ID 36073): CSDB ID(s): 101329, 111290 Molecule role (analog of): N-glycan | ||
| Enzyme name: mnn10p UniProt ID: P50108* CAZy family: GT34 Gene name: MNN10/BED1 Gene GenBank ID: 851832* | Synthesized dimer: aDManp(1-6)aDManp Donor (ID 35793): ?DManp(1-P-P-5)xXnucG Acceptor (ID 36072): aDManp(1-6)aDManp Status: evidence in vitro
Confirmation methods: in vitro (purified protein); mutation ID: 200 Notes: Mnn10p and Mnn11p are parts of M-Pol II complex, that responsible for the majority of the a-1,6-polymerizing activity of the complex | Organism (ID 9927): Saccharomyces cerevisiae SEY6210 Full structure (ID 7985): CSDB ID(s): 23161, 45423, 45854, 101328, 104620, 111291, 117559, 137234 Molecule role (analog of): N-glycan | Schmidt et al. 2005 DOI: 10.1002/yea.1242 Jungmann et al. 1999 DOI: 10.1074/jbc.274.10.6579 |
| Synthesized dimer: aDManp(1-6)aDManp Donor (ID 35793): ?DManp(1-P-P-5)xXnucG Acceptor (ID 36090): PEP(1-2)[aDManp(1-2)aDManp(1-2)[/aDManp(1-6)/n=10/aDManp(1-6)]aDManp(1-3)[aDManp(1-3)[aDManp(1-2)aDManp(1-6)]aDManp(1-6)]bDManp(1-4)[Ac(1-2)]bDGlcpN(1-4)[Ac(1-2)]bDGlcpN1N(1-4)]x?Asn(1-2)PEP // PEP = protein fragment Status: semi-direct evidence in vivo
Confirmation methods: mutation; in vitro (purified protein); ID: 201 Notes: Mnn10 mutants may be defective in the activity or regulation of the a-1,6 mannosyltransferases involved in the elongation of the outer chain. Mnn10 mutant cells are truncated, containing an average of 10-14 mannose residues in outer chain as compared to 50 or more in wild type oligosaccharides. | Organism (ID 9927,16578,16579,16580,16581,16582,16583,16584): Saccharomyces cerevisiae SEY6210, NDY4, HTY10, RSY255, NH141, JPY11, JPY12, CTY182 Exact full structure is unknownCSDB ID(s): 44114 Molecule role (precursor of): N-glycan | Hirayama et al. 2012 DOI: 10.1016/j.bbrc.2012.02.068 Orlean et al. 2012 DOI: 10.1534/genetics.112.144485 Stolz et al. 2002 DOI: 10.1074/jbc.M208023200 Jungmann et al. 1999 DOI: 10.1074/jbc.274.10.6579 Dean et al. 1996 DOI: 10.1093/glycob/6.1.73 Bartkeviciute et al. 2004 DOI: 10.1016/j.femsyr.2004.03.001 Lien et al. 2013 DOI: 10.1021/bi3009483 Mondesert et al. 1996 DOI: 10.1083/jcb.132.1.137 | |
| Enzyme name: mnn11p UniProt ID: P46985* CAZy family: GT34 Gene name: MNN11 Gene GenBank ID: 853256* | Synthesized dimer: aDManp(1-6)aDManp Donor (ID 35793): ?DManp(1-P-P-5)xXnucG Acceptor (ID 36072): aDManp(1-6)aDManp Status: evidence in vitro
Confirmation methods: in vitro (purified protein); mutation; ID: 202 Notes: Mnn10p and Mnn11p are parts of M-Pol II complex, that responsible for the majority of the a-1,6-polymerizing activity of the complex | Organism (ID 9927): Saccharomyces cerevisiae SEY6210 Full structure (ID 7985): CSDB ID(s): 23161, 45423, 45854, 101328, 104620, 111291, 117559, 137234 Molecule role (analog of): N-glycan | Kojima et al. 1999 DOI: 10.1271/bbb.63.1970 Jungmann et al. 1999 DOI: 10.1074/jbc.274.10.6579 Bartkeviciute et al. 2004 DOI: 10.1016/j.femsyr.2004.03.001 |
| Synthesized dimer: aDManp(1-6)aDManp Donor (ID 35793): ?DManp(1-P-P-5)xXnucG Acceptor (ID 36090): PEP(1-2)[aDManp(1-2)aDManp(1-2)[/aDManp(1-6)/n=10/aDManp(1-6)]aDManp(1-3)[aDManp(1-3)[aDManp(1-2)aDManp(1-6)]aDManp(1-6)]bDManp(1-4)[Ac(1-2)]bDGlcpN(1-4)[Ac(1-2)]bDGlcpN1N(1-4)]x?Asn(1-2)PEP // PEP = protein fragment Status: semi-direct evidence in vivo
Confirmation methods: in vitro (purified protein); mutation ID: 203 Notes: a-1,6-linked mannose main chain is expanded by M-Pol I (Mnn9p and Van1p) and M-Pol II (Mnn9p, Mnn10p, Mnn11p, Anp1p, and Hoc1p) complexes | Organism (ID 9927,10607): Saccharomyces cerevisiae SEY6210, BY4741 Exact full structure is unknownCSDB ID(s): 236854 Molecule role (precursor of): N-glycan | Hirayama et al. 2012 DOI: 10.1016/j.bbrc.2012.02.068 Orlean et al. 2012 DOI: 10.1534/genetics.112.144485 Jungmann et al. 1999 DOI: 10.1074/jbc.274.10.6579 | |
| Enzyme name: van1p UniProt ID: P23642* CAZy family: GT62 Gene name: VAN1 Gene GenBank ID: 854925* | Synthesized dimer: aDManp(1-6)aDManp Donor (ID 35793): ?DManp(1-P-P-5)xXnucG Acceptor (ID 36072): aDManp(1-6)aDManp Status: evidence in vitro
Confirmation methods: in vitro (purified protein); expression in P. pastoris ID: 205 Notes: Mnn9p and Van1p are subunits of M-Pol I complex, that adds up to 10 a-1,6 linked mannose residues, forming the mannan backbone | Organism (ID 9927,16485,16573): Saccharomyces cerevisiae SEY6210, SEY6211, X21801Bα Expressed in: P. pastoris Full structure (ID 7985): CSDB ID(s): 23161, 45423, 45854, 101328, 104620, 111291, 137234 Molecule role (analog of): N-glycan | Rodionov et al. 2009 DOI: 10.1016/j.pep.2009.02.013 Jungmann et al. 1998 DOI: 10.1093/emboj/17.2.423 Stolz et al. 2002 DOI: 10.1074/jbc.M208023200 |
| Synthesized dimer: aDManp(1-6)aDManp Donor (ID 35793): ?DManp(1-P-P-5)xXnucG Acceptor (ID 36080): aDManp(1-6)aDManp(1-6)aDManp Status: evidence in vitro
Confirmation methods: in vitro (purified protein); expression in P. pastoris ID: 206 Notes: Mnn9p and Van1p are subunits of M-Pol I complex, that adds up to 10 a-1,6 linked mannose residues, forming the mannan backbone | Organism (ID 16573): Saccharomyces cerevisiae X21801Bα Expressed in: P. pastoris Full structure (ID 7986): CSDB ID(s): 23162, 45423, 45854, 110094, 118703, 140208, 147308, 147723 Molecule role (analog of): N-glycan | ||
| Synthesized dimer: aDManp(1-6)aDManp Donor (ID 35793): ?DManp(1-P-P-5)xXnucG Acceptor (ID 36081): aDManp(1-6)aDManp(1-6)aDManp(1-6)aDManp Status: evidence in vitro
Confirmation methods: in vitro (purified protein); expression in P. pastoris ID: 207 Notes: Mnn9p and Van1p are subunits of M-Pol I complex, that adds up to 10 a-1,6 linked mannose residues, forming the mannan backbone | Organism (ID 16573): Saccharomyces cerevisiae X21801Bα Expressed in: P. pastoris Full structure (ID 36082): CSDB ID(s): 592, 12958, 12971, 40003, 40425, 40694, 40762, 41299, 41865, 42227, 43302, 44107, 44118, 45423, 45854, 110094, 118209, 118703, 140208, 147308, 147723 Molecule role (analog of): N-glycan | ||
| Synthesized dimer: aDManp(1-6)aDManp Donor (ID 35793): ?DManp(1-P-P-5)xXnucG Acceptor (ID 36083): aDManp(1-6)aDManp(1-6)aDManp(1-6)aDManp(1-6)aDManp Status: evidence in vitro
Confirmation methods: in vitro (purified protein); expression in P. pastoris ID: 208 Notes: Mnn9p and Van1p are subunits of M-Pol I complex, that adds up to 10 a-1,6 linked mannose residues, forming the mannan backbone | Organism (ID 16573): Saccharomyces cerevisiae X21801Bα Expressed in: P. pastoris Full structure (ID 36084): CSDB ID(s): 592, 12958, 12971, 40003, 40425, 40694, 40762, 41299, 41865, 42227, 43302, 44107, 44118, 45423, 45854, 110094, 118209, 118703, 140208, 147308, 147723 Molecule role (analog of): N-glycan | ||
| Synthesized dimer: aDManp(1-6)aDManp Donor (ID 35793): ?DManp(1-P-P-5)xXnucG Acceptor (ID 36085): aDManp(1-6)aDManp(1-6)aDManp(1-6)aDManp(1-6)aDManp(1-6)aDManp Status: evidence in vitro
Confirmation methods: in vitro (purified protein); expression in P. pastoris ID: 209 Notes: Mnn9p and Van1p are subunits of M-Pol I complex, that adds up to 10 a-1,6 linked mannose residues, forming the mannan backbone | Organism (ID 16573): Saccharomyces cerevisiae X21801Bα Expressed in: P. pastoris Full structure (ID 36086): CSDB ID(s): 592, 12958, 12971, 40003, 40425, 40694, 40762, 41299, 41865, 42227, 43302, 44107, 44118, 45423, 45854, 110094, 118209, 118703, 140208, 147308, 147723 Molecule role (analog of): N-glycan | ||
| Synthesized dimer: aDManp(1-6)aDManp Donor (ID 35793): ?DManp(1-P-P-5)xXnucG Acceptor (ID 36088): PEP(1-2)[aDManp(1-2)aDManp(1-2)[aDManp(1-6)]aDManp(1-3)[aDManp(1-3)[aDManp(1-2)aDManp(1-6)]aDManp(1-6)]bDManp(1-4)[Ac(1-2)]bDGlcpN(1-4)[Ac(1-2)]bDGlcpN1N(1-4)]x?Asn(1-2)PEP // PEP = protein fragment Status: direct evidence in vivo
Confirmation methods: mutation; in vitro (purified protein); expression in P. pastoris ID: 210 Notes: Both Mnn9p and Van1p participate directly in the extension of the mannan backbone by the M-Pol I complex | Organism (ID 10666,16573): Saccharomyces cerevisiae KA31-1A, X21801Bα Full structure (ID 36089): CSDB ID(s): 236854 Molecule role (precursor of): N-glycan | Hirayama et al. 2012 DOI: 10.1016/j.bbrc.2012.02.068 Rodionov et al. 2009 DOI: 10.1016/j.pep.2009.02.013 Jungmann et al. 1998 DOI: 10.1093/emboj/17.2.423 Stolz et al. 2002 DOI: 10.1074/jbc.M208023200 Schmidt et al. 2005 DOI: 10.1002/yea.1242 Hashimoto et al. 1997 DOI: 10.1006/bbrc.1997.7888 | |
| Enzyme name: anp1p UniProt ID: P32629* CAZy family: GT62 Gene name: ANP1 Gene GenBank ID: 856675* | Synthesized dimer: aDManp(1-6)aDManp Donor (ID 35793): ?DManp(1-P-P-5)xXnucG Acceptor (ID 36072): aDManp(1-6)aDManp Status: evidence in vitro
Confirmation methods: in vitro (purified protein); ID: 211 Notes: Mnn9p and Anp1p are subunits of M-Pol II complex, that adds up to 50 a-1,6 linked mannose residues, forming the mannan backbone | Organism (ID 9927,16485,16574): Saccharomyces cerevisiae SEY6210, SEY6211, AA662 Full structure (ID 7985): CSDB ID(s): 23161, 45423, 45854, 101328, 104620, 111291, 117559, 137234 Molecule role (analog of): N-glycan | Rodionov et al. 2009 DOI: 10.1016/j.pep.2009.02.013 Jungmann et al. 1998 DOI: 10.1093/emboj/17.2.423 |
| Synthesized dimer: aDManp(1-6)aDManp Donor (ID 35793): ?DManp(1-P-P-5)xXnucG Acceptor (ID 36080): aDManp(1-6)aDManp(1-6)aDManp Status: evidence in vitro
Confirmation methods: in vitro (purified protein); ID: 212 Notes: Mnn9p and Anp1p are subunits of M-Pol II complex, that adds up to 50 a-1,6 linked mannose residues, forming the mannan backbone | Organism (ID 9927,16485,16575): Saccharomyces cerevisiae SEY6210, SEY6211, AA663 Full structure (ID 7986): CSDB ID(s): 23162, 45423, 45854, 110094, 117559, 118703, 140208, 147308, 147723 Molecule role (analog of): N-glycan | Jungmann et al. 1998 DOI: 10.1093/emboj/17.2.423 | |
| Synthesized dimer: aDManp(1-6)aDManp Donor (ID 35793): ?DManp(1-P-P-5)xXnucG Acceptor (ID 36081): aDManp(1-6)aDManp(1-6)aDManp(1-6)aDManp Status: evidence in vitro
Confirmation methods: in vitro (purified protein); ID: 213 Notes: Mnn9p and Anp1p are subunits of M-Pol II complex, that adds up to 50 a-1,6 linked mannose residues, forming the mannan backbone | Organism (ID 9927,16485,16576): Saccharomyces cerevisiae SEY6210, SEY6211, AA664 Full structure (ID 36082): CSDB ID(s): 592, 12958, 12971, 40003, 40425, 40694, 40762, 41299, 41865, 42227, 43302, 44107, 44118, 45423, 45854, 110094, 118209, 118703, 140208, 147308, 147723 Molecule role (analog of): N-glycan | ||
| Synthesized dimer: aDManp(1-6)aDManp Donor (ID 35793): ?DManp(1-P-P-5)xXnucG Acceptor (ID 36090): PEP(1-2)[aDManp(1-2)aDManp(1-2)[/aDManp(1-6)/n=10/aDManp(1-6)]aDManp(1-3)[aDManp(1-3)[aDManp(1-2)aDManp(1-6)]aDManp(1-6)]bDManp(1-4)[Ac(1-2)]bDGlcpN(1-4)[Ac(1-2)]bDGlcpN1N(1-4)]x?Asn(1-2)PEP // PEP = protein fragment Status: direct evidence in vivo
Confirmation methods: mutation; in vitro (purified protein) ID: 214 Notes: Component of the M-Pol II complex composed of ANP1, MNN9, MNN10, MNN11 and HOC1 | Organism (ID 9927,10666,16485,16576): Saccharomyces cerevisiae SEY6210, KA31-1A, SEY6211, AA664 Exact full structure is unknownCSDB ID(s): 236854 Molecule role (precursor of): N-glycan | Hirayama et al. 2012 DOI: 10.1016/j.bbrc.2012.02.068 Orlean et al. 2012 DOI: 10.1534/genetics.112.144485 Rodionov et al. 2009 DOI: 10.1016/j.pep.2009.02.013 Jungmann et al. 1998 DOI: 10.1093/emboj/17.2.423 Schmidt et al. 2005 DOI: 10.1002/yea.1242 Hashimoto et al. 1997 DOI: 10.1006/bbrc.1997.7888 | |
| Enzyme name: och1p UniProt ID: P31755* CAZy family: GT32 Gene name: OCH1 Gene GenBank ID: 852845* | Synthesized dimer: aDManp(1-6)aDManp Donor (ID 35793): ?DManp(1-P-P-5)xXnucG Acceptor (ID 36091): aDManp(1-2)aDManp(1-2)aDManp(1-3)[aDManp(1-2)aDManp(1-3)[aDManp(1-2)aDManp(1-6)]aDManp(1-6)]bDManp(1-4)[Ac(1-2)]bDGlcpN(1-4)[Ac(1-2)]?DGlcpN1N(1-2)Subst // Subst = aminopyridine = SMILES n1cccc{2}c1N Status: evidence in vitro
Confirmation methods: in vitro (purified protein); expression in P. pastoris ID: 215 Notes: Och1p has the potential to transfer two mannoses from GDP-mannose and recognizes the overall structure of high mannose type oligosaccharide | Organism (ID 10607,16454,16540,16550,16585,16586,16587,16588,16589,16590,16591,16592,16593,16594,16595): Saccharomyces cerevisiae BY4741, W303-1A, YN5-2C, EBY100, YPH500, YS52-1-1B, KK4, X-2180-1A, DBY746, 20B-12, KD115, X10-1C, X10-2A, IS428-36B, KS80-1OB Expressed in: P. pastoris Full structure (ID 36092): CSDB ID(s): 44142 Molecule role (analog of): N-glycan | Stolz et al. 2002 DOI: 10.1074/jbc.M208023200 Kitajima et al. 2006 DOI: 10.1111/j.1742-4658.2006.05505.x Nakayama et al. 1992 PMID: 1628616 Nakayama et al. 1997 DOI: 10.1016/S0014-5793(97)00634-0 |
| Synthesized dimer: aDManp(1-6)aDManp Donor (ID 35793): ?DManp(1-P-P-5)xXnucG Acceptor (ID 36093): aDManp(1-2)aDManp(1-2)[aDManp(1-6)]aDManp(1-3)[aDManp(1-2)aDManp(1-3)[aDManp(1-2)aDManp(1-6)]aDManp(1-6)]bDManp(1-4)[Ac(1-2)]bDGlcpN(1-4)[Ac(1-2)]?DGlcpN1N(1-2)Subst // Subst = aminopyridine = SMILES n1cccc{2}c1N Status: evidence in vitro
Confirmation methods: in vitro (purified protein); expression in P. pastoris ID: 216 Notes: Och1p has the potential to transfer two mannoses from GDP-mannose and recognizes the overall structure of high mannose type oligosaccharide | Organism (ID 16585): Saccharomyces cerevisiae YPH500 Expressed in: P. pastoris Full structure (ID 36094): CSDB ID(s): 44142 Molecule role (analog of): N-glycan | Stolz et al. 2002 DOI: 10.1074/jbc.M208023200 Kitajima et al. 2006 DOI: 10.1111/j.1742-4658.2006.05505.x Nakayama et al. 1992 PMID: 1628616 | |
| Synthesized dimer: aDManp(1-6)aDManp Donor (ID 35793): ?DManp(1-P-P-5)xXnucG Acceptor (ID 36095): aDManp(1-3)[aDManp(1-2)aDManp(1-3)[aDManp(1-6)]aDManp(1-6)]bDManp(1-4)[Ac(1-2)]bDGlcpN(1-4)[Ac(1-2)]?DGlcpN1N(1-2)Subst // Subst = aminopyridine = SMILES n1cccc{2}c1N Status: evidence in vitro
Confirmation methods: in vitro (purified protein); expression in P. pastoris ID: 217 Notes: Och1p has the potential to transfer two mannoses from GDP-mannose and recognizes the overall structure of high mannose type oligosaccharide | Organism (ID 16585): Saccharomyces cerevisiae YPH500 Expressed in: P. pastoris Full structure (ID 36096): CSDB ID(s): 44142 Molecule role (analog of): N-glycan | ||
| Synthesized dimer: aDManp(1-6)aDManp Donor (ID 35793): ?DManp(1-P-P-5)xXnucG Acceptor (ID 36095): aDManp(1-3)[aDManp(1-2)aDManp(1-3)[aDManp(1-6)]aDManp(1-6)]bDManp(1-4)[Ac(1-2)]bDGlcpN(1-4)[Ac(1-2)]?DGlcpN1N(1-2)Subst // Subst = aminopyridine = SMILES n1cccc{2}c1N Status: evidence in vitro
Confirmation methods: in vitro (purified protein); expression in P. pastoris ID: 218 Notes: Och1p has the potential to transfer two mannoses from GDP-mannose and recognizes the overall structure of high mannose type oligosaccharide | Organism (ID 16585): Saccharomyces cerevisiae YPH500 Expressed in: P. pastoris Full structure (ID 36097): CSDB ID(s): 44142 Molecule role (analog of): N-glycan | ||
| Synthesized dimer: aDManp(1-6)aDManp Donor (ID 35793): ?DManp(1-P-P-5)xXnucG Acceptor (ID 36098): aDManp(1-6)aDManp(1-3)[aDManp(1-2)aDManp(1-3)[aDManp(1-6)]aDManp(1-6)]bDManp(1-4)[Ac(1-2)]bDGlcpN(1-4)[Ac(1-2)]?DGlcpN1N(1-2)Subst // Subst = aminopyridine = SMILES n1cccc{2}c1N Status: evidence in vitro
Confirmation methods: in vitro (purified protein); expression in P. pastoris ID: 219 Notes: Och1p has the potential to transfer two mannoses from GDP-mannose and recognizes the overall structure of high mannose type oligosaccharide | Organism (ID 16585): Saccharomyces cerevisiae YPH500 Expressed in: P. pastoris Full structure (ID 36099): CSDB ID(s): 44142 Molecule role (analog of): N-glycan | ||
| Synthesized dimer: aDManp(1-6)aDManp Donor (ID 35793): ?DManp(1-P-P-5)xXnucG Acceptor (ID 36100): aDManp(1-3)[aDManp(1-2)[aDManp(1-6)]aDManp(1-3)[aDManp(1-6)]aDManp(1-6)]bDManp(1-4)[Ac(1-2)]bDGlcpN(1-4)[Ac(1-2)]?DGlcpN1N(1-2)Subst // Subst = aminopyridine = SMILES n1cccc{2}c1N Status: evidence in vitro
Confirmation methods: in vitro (purified protein); expression in P. pastoris ID: 220 Notes: Och1p has the potential to transfer two mannoses from GDP-mannose and recognizes the overall structure of high mannose type oligosaccharide | Organism (ID 16585): Saccharomyces cerevisiae YPH500 Expressed in: P. pastoris Full structure (ID 36099): CSDB ID(s): 44142 Molecule role (analog of): N-glycan | ||
| Synthesized dimer: aDManp(1-6)aDManp Donor (ID 35793): ?DManp(1-P-P-5)xXnucG Acceptor (ID 36056): PEP(1-2)[aDManp(1-2)aDManp(1-2)aDManp(1-3)[aDManp(1-3)[aDManp(1-2)aDManp(1-6)]aDManp(1-6)]bDManp(1-4)[Ac(1-2)]bDGlcpN(1-4)[Ac(1-2)]?DGlcpN1N(1-4)]x?Asn(1-2)PEP // PEP = protein fragment Status: direct evidence in vivo
Confirmation methods: mutation; overexpression; in vitro (purified protein) ID: 221 Notes: OCH1 gene encodes an a-1,6-mannosyltransferase that is functional in the initiation of a-1,6-polymannose outer chain addition to the N-linked core oligosaccharide in yeast. | Organism (ID 16539,16540,16541,16542,16543,16544,16545,16546,16547,16548,16549,16587,16596,16597,16598,16599): Saccharomyces cerevisiae YN3-1D, YN5-2C, YN1-28A, YN1-28B, YN4-18A, YS57-5A, YS57-2C, YN2-12A, YN2-14A, YN2-15C, PRY90, KK4, EHF-2C, EHA-1C, YS374C, EGI-103 Full structure (ID 36101): CSDB ID(s): 44114 Molecule role (precursor of): N-glycan | Nakanishi-Shindo et al. 1993 PMID: 8253757 Hirayama et al. 2012 DOI: 10.1016/j.bbrc.2012.02.068 Schmidt et al. 2005 DOI: 10.1002/yea.1242 Nakayama et al. 1992 PMID: 1628616 | |
| Synthesized dimer: aDManp(1-6)aDManp Donor (ID 35793): ?DManp(1-P-P-5)xXnucG Acceptor (ID 36102): aDManp(1-2)aDManp(1-2)aDManp(1-3)[aDManp(1-3)[aDManp(1-2)aDManp(1-6)]aDManp(1-6)]bDManp(1-4)[Ac(1-2)]bDGlcpN(1-4)[Ac(1-2)]?DGlcpN Status: evidence in vitro
Confirmation methods: in vitro (membrane preparation); in vitro (mutation) ID: 222 Notes: Membranes isolated from an och1 mutant were not able to transfer mannose from GDPmannose to MansGlcNAc2, the in vivo acceptor for building up the outer chain | Organism (ID 9585,16398,16600,16601,16602): Saccharomyces cerevisiae X2180-1A, W303, BMY 3-9A, LB2303-3A, LLY1 Full structure (ID 36103): CSDB ID(s): 41282, 42175, 43399, 43520 Molecule role (analog of): N-glycan | Nakayama et al. 1997 DOI: 10.1016/S0014-5793(97)00634-0 Lehle et al. 1995 DOI: 10.1016/0014-5793(95)00789-C Bruinsma et al. 2004 DOI: 10.1074/jbc.M405500200 Cui et al. 2002 DOI: 10.1002/yea.801 | |
| Synthesized dimer: aDManp(1-6)aDManp Donor (ID 35793): ?DManp(1-P-P-5)xXnucG Acceptor (ID 36104): aDManp(1-2)aDManp(1-2)[aDManp(1-6)]aDManp(1-3)[aDManp(1-3)[aDManp(1-2)aDManp(1-6)]aDManp(1-6)]bDManp(1-4)[Ac(1-2)]bDGlcpN(1-4)[Ac(1-2)]?DGlcpN Status: evidence in vitro
Confirmation methods: in vitro (membrane preparation); in vitro (mutation) ID: 223 Notes: Membranes isolated from an och1 mutant were not able to transfer mannose from GDPmannose to MansGlcNAc2, the in vivo acceptor for building up the outer chain | Organism (ID 9585,16398,16600,16601,16602): Saccharomyces cerevisiae X2180-1A, W303, BMY 3-9A, LB2303-3A, LLY1 Full structure (ID 36105): Molecule role (analog of): N-glycan | Nakayama et al. 1997 DOI: 10.1016/S0014-5793(97)00634-0 Lehle et al. 1995 DOI: 10.1016/0014-5793(95)00789-C | |
| Synthesized dimer: aDManp(1-6)aDManp Donor (ID 35793): ?DManp(1-P-P-5)xXnucG Acceptor (ID 36013): aDManp(1-2)aDManp(1-2)aDManp(1-3)[aDManp(1-3)[aDManp(1-2)aDManp(1-6)]aDManp(1-6)]bDManp(1-4)[Ac(1-2)]bDGlcpN(1-4)[Ac(1-2)]?DGlcpN1N(1-2)Subst // Subst = aminopyridine = SMILES n1cccc{2}c1N Status: evidence in vitro
Confirmation methods: in vitro (mutation); in vtiro (overexpression); in vitro (membrane preparation); complementation; mutation ID: 224 Notes: Och1p is an initiation specific a-l,6-mannosyltransferase that requires the intact structure of Man8GlcNAc for efficient mannose outer chain initiation. Mnn1 och1 double mutant exhibited defects in cell cytokinesis, showed a slower growth rate, and became temperature-sensitive | Organism (ID 10607,16454,16540,16550,16586,16587,16588,16589,16590,16591,16592,16593,16594,16595): Saccharomyces cerevisiae BY4741, W303-1A, YN5-2C, EBY100, YS52-1-1B, KK4, X-2180-1A, DBY746, 20B-12, KD115, X10-1C, X10-2A, IS428-36B, KS80-1OB Full structure (ID 36106): Molecule role (analog of): N-glycan | Nakanishi-Shindo et al. 1993 PMID: 8253757 Zhou et al. 2007 DOI: 10.1007/s00284-006-0585-5 Nakayama et al. 1997 DOI: 10.1016/S0014-5793(97)00634-0 Nagasu et al. 1992 DOI: 10.1002/yea.320080705 | |
| Enzyme name: alg1p UniProt ID: P16661 CAZy family: GT33 Gene name: ALG1 Gene GenBank ID: 852407 | Synthesized dimer: bDManp(1-4)bDGlcpN Donor (ID 35793): ?DManp(1-P-P-5)xXnucG Acceptor (ID 36107): Ac(1-2)bDGlcpN(1-4)[Ac(1-2)]aDGlcpN(1-P-P-1)Subst // Subst = dolichol Status: evidence in vitro
Confirmation methods: in vitro (purified protein); expression in E.coli; mutation (in recombinant protein); in vitro (crude extract); mutation ID: 232 Notes: Recombinant Alg1 overexpressed in S. cerevisiae is responsible for adding first mannose residue. Yeast cells containing the alg1-1 mutation are temperature-sensitive for growth | Organism (ID 16411,16497,16603,16604): Saccharomyces cerevisiae PRY46, S288c, DBY 640, PRY56 Expressed in: E. coli Full structure (ID 36108): CSDB ID(s): 60991, 60992, 60993, 60994, 61004, 146987, 146988, 146989, 246988 Molecule role (precursor of): N-glycan | O’Reilly et al. 2006 DOI: 10.1021/bi060878o Couto et al. 1984 PMID: 6368538 Cueva et al. 1998 DOI: 10.1002/(SICI)1097-0061(19980615)14:8<773::AID-YEA284>3.0.CO%3B2-S Gao et al. 2004 DOI: 10.1093/glycob/cwh072 |
| Enzyme name: alg1p UniProt ID: P16661* CAZy family: GT33 Gene name: ALG1 Gene GenBank ID: 852407* | Synthesized dimer: bDManp(1-4)bDGlcpN Donor (ID 35793): ?DManp(1-P-P-5)xXnucG Acceptor (ID 36107): Ac(1-2)bDGlcpN(1-4)[Ac(1-2)]aDGlcpN(1-P-P-1)Subst // Subst = dolichol Status: direct evidence in vivo
Confirmation methods: in vitro (membrane preparation); mutation (in recombinant protein), mutation ID: 233 Notes: Alg1-1 cells are unable to synthesize any mannose-containing oligosaccharide-lipids, indicating a block at the addition of the first mannose residue. The synthesis of asparagine-linked oligosaccharides involves the formation of the Glc3Man9GlcNAc2 oligosaccharide. The alg1 mutant accumulated lipid-linked GlcNAc2. | Organism (ID 9593,9632,16497,16605,16606,16607,16608,16609,16610,16611,16612,16613): Saccharomyces cerevisiae DBY640, DBY1033, S288c, DBY741, HMSF176, A364A, RS868, W303-1b, PRY55, PRY212, PRY95, RSY27 Full structure (ID 36109): CSDB ID(s): 60994 Molecule role (precursor of): N-glycan | Couto et al. 1984 PMID: 6368538 Huffaker et al. 1982 PMID: 7037780 Huffaker et al. 1983 DOI: 10.1073/pnas.80.24.7466 Roos et al. 1994 DOI: 10.1073/pnas.91.4.1485 Albright et al. 1990 PMID: 2182636 Wilson et al. 1995 DOI: 10.1042/bj3100909 |
| Synthesized dimer: bDManp(1-4)bDGlcpN Donor (ID 35793): ?DManp(1-P-P-5)xXnucG Acceptor (ID 36110): Ac(1-2)bDGlcpN(1-4)[Ac(1-2)]aDGlcpN(1-P-P-1)Phyt Status: evidence in vitro
Confirmation methods: expression in E. coli; in vitro (in recombinant protein); in vitro (crude extract); in vitro (mutation) ID: 234 Notes: A chemically synthesized dolichol-linked oligosaccharide analogue, phytanyl-pyrophosphoryl-α-N, N′-diacetylchitobioside (PPGn2), was used as the acceptor for the β-1, 4 mannosyl transfer reaction | Organism (ID 9585): Saccharomyces cerevisiae X2180-1A Expressed in: E. coli Full structure (ID 36111): Molecule role (analog of): N-glycan | Wilson et al. 1995 DOI: 10.1042/bj3100909 Li et al. 2017b DOI: 10.1016/j.bbagen.2016.09.023 Revers et al. 1994 DOI: 10.1042/bj2990023 Revers et al. 1999 DOI: 10.1016/S0304-4165(99)00048-3 Watt et al. 1998 DOI: 10.1016/S0008-6215(97)00261-9 Watt et al. 1997 DOI: 10.1002/anie.199723541 Flitsch et al. 1992 DOI: 10.1039/p19920002087 Li et al. 2019 DOI: 10.1038/s41467-019-09752-3 | |
| Synthesized dimer: bDManp(1-4)bDGlcpN Donor (ID 35793): ?DManp(1-P-P-5)xXnucG Acceptor (ID 36107): Ac(1-2)bDGlcpN(1-4)[Ac(1-2)]aDGlcpN(1-P-P-1)Subst // Subst = dolichol Status: evidence in vitro
Confirmation methods: expression in E. coli; in vitro (in recombinant protein); in vitro (membrane preparation) ID: 235 Notes: The dolichyl- and phytanyl-linked substrates were easily mannosylated to form Man5GlcNAc2 at low concentrations of lipid-linked substrate | Organism (ID 9585): Saccharomyces cerevisiae X2180-1A Expressed in: E. coli Full structure (ID 36112): CSDB ID(s): 60991, 146989 Molecule role (analog of): N-glycan | Huffaker et al. 1983 DOI: 10.1073/pnas.80.24.7466 Wilson et al. 1995 DOI: 10.1042/bj3100909 | |
| Synthesized dimer: bDManp(1-4)bDGlcpN Donor (ID 35793): ?DManp(1-P-P-5)xXnucG Acceptor (ID 36110): Ac(1-2)bDGlcpN(1-4)[Ac(1-2)]aDGlcpN(1-P-P-1)Phyt Status: evidence in vitro
Confirmation methods: expression in E. coli; in vitro (in recombinant protein); in vitro (membrane preparation) ID: 236 Notes: The dolichyl- and phytanyl-linked substrates were easily mannosylated to form Man5GlcNAc2 at low concentrations of lipid-linked substrate | Organism (ID 9585): Saccharomyces cerevisiae X2180-1A Expressed in: E. coli Full structure (ID 36113): Molecule role (analog of): N-glycan | Wilson et al. 1995 DOI: 10.1042/bj3100909 Li et al. 2019 DOI: 10.1038/s41467-019-09752-3 | |
| Enzyme name: alg2p UniProt ID: P43636* CAZy family: GT4 Gene name: ALG2 Gene GenBank ID: 852815* | Synthesized dimer: aDManp(1-3)bDManp Donor (ID 35793): ?DManp(1-P-P-5)xXnucG Acceptor (ID 36114): bDManp(1-4)[Ac(1-2)]bDGlcpN(1-4)[Ac(1-2)]?DGlcpN(1-P-P-1)Subst // Subst = dolichol Status: direct evidence in vivo
Confirmation methods: in vitro (membrane preparation); in vitro (mutation); mutation; expression in E.coli ID: 239 Notes: Alg2 is responsible for adding second and third mannose residue (presumably Man(1->3) is added first). | Organism (ID 16389,16411,16454,16614): Saccharomyces cerevisiae SS328, PRY46, W303-1A, DBY747 Full structure (ID 36115): CSDB ID(s): 60991, 60992, 60993, 122768, 146989, 246988 Molecule role (precursor of): N-glycan | O’Reilly et al. 2006 DOI: 10.1021/bi060878o Kampf et al. 2009 DOI: 10.1074/jbc.M806416200 |
| Synthesized dimer: aDManp(1-6)bDManp Donor (ID 35793): ?DManp(1-P-P-5)xXnucG Acceptor (ID 36114): bDManp(1-4)[Ac(1-2)]bDGlcpN(1-4)[Ac(1-2)]?DGlcpN(1-P-P-1)Subst // Subst = dolichol Status: direct evidence in vivo
Confirmation methods: in vitro (membrane preparation); in vitro (mutation); mutation; expression in E.coli ID: 240 Notes: Alg2 is responsible for adding second and third mannose residue (presumably Man(1->3) is added first). | Organism (ID 16389,16411,16454,16614): Saccharomyces cerevisiae SS328, PRY46, W303-1A, DBY747 Full structure (ID 36115): CSDB ID(s): 60991, 60992, 60993, 122768, 146989, 246988 Molecule role (precursor of): N-glycan | ||
| Synthesized dimer: aDManp(1-3)bDManp Donor (ID 35793): ?DManp(1-P-P-5)xXnucG Acceptor (ID 36116): bDManp(1-4)[Ac(1-2)]bDGlcpN(1-4)[Ac(1-2)]?DGlcpN(1-P-P-1)Phyt Status: evidence in vitro
Confirmation methods: expression in E. coli; in vitro (membrane preparation) ID: 241 Notes: Reconstitution of the lipid-linked oligosaccharide pathway is presented. | Organism (ID 9605): Saccharomyces cerevisiae Expressed in: E. coli Full structure (ID 36117): Molecule role (analog of): N-glycan | Li et al. 2019 DOI: 10.1038/s41467-019-09752-3 | |
| Synthesized dimer: aDManp(1-6)bDManp Donor (ID 35793): ?DManp(1-P-P-5)xXnucG Acceptor (ID 36116): bDManp(1-4)[Ac(1-2)]bDGlcpN(1-4)[Ac(1-2)]?DGlcpN(1-P-P-1)Phyt Status: evidence in vitro
Confirmation methods: expression in E. coli; in vitro (membrane preparation) ID: 242 Notes: Reconstitution of the lipid-linked oligosaccharide pathway is presented. | Organism (ID 9605): Saccharomyces cerevisiae Expressed in: E. coli Full structure (ID 36117): Molecule role (analog of): N-glycan | ||
| Enzyme name: alg11p UniProt ID: P53954* CAZy family: GT4 Gene name: ALG11 Gene GenBank ID: 855679* | Synthesized dimer: aDManp(1-2)aDManp Donor (ID 35793): ?DManp(1-P-P-5)xXnucG Acceptor (ID 36118): aDManp(1-3)[aDManp(1-6)]bDManp(1-4)[Ac(1-2)]bDGlcpN(1-4)[Ac(1-2)]?DGlcpN(1-P-P-1)Subst // Subst = dolichol Status: direct evidence in vivo
Confirmation methods: in vitro (membrane preparation); in vitro (mutation); expression in E.coli; mutation ID: 243 Notes: Alg2 and Alg11 were cloned and expressed in Escherichia coli as thioredoxin (TRX) fusions at the N terminus for improved expression. Alg11 is responsible for adding fourth and fifth mannose residue.The subtrates with synthetic aglycone (2-aminobenzamide) were also used | Organism (ID 9927,16389,16408,16411,16454,16463,16464,16615,16616): Saccharomyces cerevisiae SEY6210, SS328, SS330, PRY46, W303-1A, MCY1094, NDY17.4, NDY13.4, BAY2402 Expressed in: E. coli Full structure (ID 36119): CSDB ID(s): 60991, 60992, 60993, 146989, 246988 Molecule role (precursor of): N-glycan | O’Reilly et al. 2006 DOI: 10.1021/bi060878o Cipollo et al. 2001 DOI: 10.1074/jbc.M010896200 Absmanner et al. 2010 DOI: 10.1042/BJ20091121 |
| Synthesized dimer: aDManp(1-2)aDManp Donor (ID 35793): ?DManp(1-P-P-5)xXnucG Acceptor (ID 36120): aDManp(1-2)aDManp(1-3)[aDManp(1-6)]bDManp(1-4)[Ac(1-2)]bDGlcpN(1-4)[Ac(1-2)]?DGlcpN(1-P-P-1)Subst // Subst = dolichol Status: direct evidence in vivo
Confirmation methods: in vitro (membrane preparation); in vitro (mutation); expression in E.coli; mutation ID: 244 Notes: Alg2 and Alg11 were cloned and expressed in Escherichia coli as thioredoxin (TRX) fusions at the N terminus for improved expression. Alg11 is responsible for adding fourth and fifth mannose residue. The subtrates with synthetic aglycone (2-aminobenzamide) were also used | Organism (ID 9927,16389,16408,16411,16454,16463,16464,16615,16616): Saccharomyces cerevisiae SEY6210, SS328, SS330, PRY46, W303-1A, MCY1094, NDY17.4, NDY13.4, BAY2402 Expressed in: E. coli Full structure (ID 36121): CSDB ID(s): 60991, 146989 Molecule role (precursor of): N-glycan | ||
| Synthesized dimer: aDManp(1-2)aDManp Donor (ID 35793): ?DManp(1-P-P-5)xXnucG Acceptor (ID 36122): aDManp(1-3)[aDManp(1-6)]bDManp(1-4)[Ac(1-2)]bDGlcpN(1-4)[Ac(1-2)]?DGlcpN(1-P-P-1)Phyt Status: evidence in vitro
Confirmation methods: expression in E. coli; in vitro (membrane preparation) ID: 245 Notes: Reconstitution of the lipid-linked oligosaccharide pathway is presented. | Organism (ID 9605): Saccharomyces cerevisiae Expressed in: E. coli Full structure (ID 36123): Molecule role (analog of): N-glycan | Li et al. 2019 DOI: 10.1038/s41467-019-09752-3 | |
| Synthesized dimer: aDManp(1-2)aDManp Donor (ID 35793): ?DManp(1-P-P-5)xXnucG Acceptor (ID 36124): aDManp(1-2)aDManp(1-3)[aDManp(1-6)]bDManp(1-4)[Ac(1-2)]bDGlcpN(1-4)[Ac(1-2)]?DGlcpN(1-P-P-1)Phyt Status: evidence in vitro
Confirmation methods: expression in E. coli; in vitro (membrane preparation) ID: 246 Notes: Reconstitution of the lipid-linked oligosaccharide pathway is presented. | Organism (ID 9605): Saccharomyces cerevisiae Expressed in: E. coli Full structure (ID 36125): Molecule role (analog of): N-glycan | ||
| Enzyme name: alg13p UniProt ID: P53178* CAZy family: GT1 Gene name: ALG13 Gene GenBank ID: 852835* | Synthesized dimer: bDGlcpN(1-4)bDGlcpN Donor (ID 35226): Ac(1-2)?DGlcpN(1-P-P-5)xXnucU Acceptor (ID 36126): Ac(1-2)bDGlcpN(1-P-P-1)Subst // Subst = dolichol Status: direct evidence in vivo
Confirmation methods: mutation; overexpression; in vitro (membrane preparation); in vitro (inhibition); in vitro (purified protein) ID: 247 Notes: Alg13 and Alg14 are required for the second step of lipid-linked oligosaccharide biosynthesis in Saccharomyces cerevisiae. Alg14p functions as a membrane anchor that recruits Alg13p to the cytosolic face of the ER, where catalysis of GlcNAc2-PP-dol occurs. Alg14 is a membrane protein that recruits the soluble Alg13 catalytic subunit from the cytosol to the face of the endoplasmic reticulum. Alg13p associates with Alg14p to form an active transferase catalyzing the biosynthesis of GlcNAc(2)-PP-Dol. | Organism (ID 16408,16454,16617,16618,16619,16620,16621,16622,16623,16624,16625,16626,16627,16628,16629,16630,16631,16632,16633,16634,16635,16636,16637,16638,16639,16640,16641,16642,16643,16644,16645,16646,16647,16648,16649): Saccharomyces cerevisiae SS330, W303-1A, R1158, W303a, XGY31, XGY151, XGY154, XGY155, SKY202, SKY203, XGY156, XGY158, XGY166, XGY167A, XGY168, W303-1B, MHY1409, XGY160, NAY13, WCG4a, WCG4-11/22a, NAY19, NAY20, NAY26, NAY105-1, NAY110-10.1b, NAY110-10.5d, NAY110-12.5b, NAY111-11.9a, NAY111-11.9d, NAY111-13.7c, SKY20, XGY11, ALG13-tetOp, ALG14-tetOp Full structure (ID 36127): Molecule role (precursor of): N-glycan | O’Reilly et al. 2006 DOI: 10.1021/bi060878o Chantret et al. 2005 DOI: 10.1074/jbc.M413941200 Gao et al. 2005 DOI: 10.1074/jbc.M507569200 Averbeck et al. 2008 DOI: 10.1091/mbc.E07–10–1077 Averbeck et al. 2007 DOI: 10.1074/jbc.M704410200 Lu et al. 2012 DOI: 10.1093/glycob/cwr162 Bickel et al. 2005 DOI: 10.1074/jbc.M506358200 |
| Enzyme name: alg3p UniProt ID: P38179* CAZy family: GT58 Gene name: ALG3 Gene GenBank ID: 852196* | Synthesized dimer: aDManp(1-3)aDManp Donor (ID 35925): ?DManp(1-P-1)Subst // Subst = dolichol Acceptor (ID 36128): aDManp(1-2)aDManp(1-2)aDManp(1-3)[aDManp(1-6)]bDManp(1-4)[Ac(1-2)]bDGlcpN(1-4)[Ac(1-2)]?DGlcpN(1-P-P-1)Subst // Subst = dolichol Status: direct evidence in vivo
Confirmation methods: in vitro (membrane preparation); in vitro (mutation); overexpression; mutation ID: 248 Notes: The alg3 mutant was described to accumulate Man5GlcNAc2-PP-Dol. Alg3p represents the mannosyltransferase itself (not an accessory protein). | Organism (ID 9585,16389,16408,16549,16650,16651,16652,16653,16654,16655,16656): Saccharomyces cerevisiae X2180-1A, SS328, SS330, PRY90, YG248, YG412, YG413, YG170, YG247, BJ1824, X79-1A Full structure (ID 36129): CSDB ID(s): 60992 Molecule role (analog of): N-glycan | Huffaker et al. 1983 DOI: 10.1073/pnas.80.24.7466 Sharma et al. 2001 DOI: 10.1515/BC.2001.039 Kimura et al.1999 PMID: 10091323 Verostek et al. 1991 PMID: 2005096 Kelleher et al. 2001 DOI: 10.1093/glycob/11.4.321 Burda et al. 1999 DOI: 10.1093/glycob/9.6.617 Burda et al. 1996 DOI: 10.1073/pnas.93.14.7160 |
| Synthesized dimer: aDManp(1-3)aDManp Donor (ID 35925): ?DManp(1-P-1)Subst // Subst = dolichol Acceptor (ID 36128): aDManp(1-2)aDManp(1-2)aDManp(1-3)[aDManp(1-6)]bDManp(1-4)[Ac(1-2)]bDGlcpN(1-4)[Ac(1-2)]?DGlcpN(1-P-P-1)Subst // Subst = dolichol Status: indirect evidence in vivo
Confirmation methods: mutation ID: 249 Notes: The method for isolation and analysis of dolichol-linked oligosaccharides from Δalg3 yeast cells was developed and improved | Organism (ID 16650): Saccharomyces cerevisiae YG248 Exact full structure is unknownCSDB ID(s): 60994 Molecule role (precursor of): N-glycan | Huffaker et al. 1983 DOI: 10.1073/pnas.80.24.7466 Kelleher et al. 2001 DOI: 10.1093/glycob/11.4.321 | |
| Synthesized dimer: aDManp(1-3)aDManp Donor (ID 35793): ?DManp(1-P-P-5)xXnucG Acceptor (ID 36130): aDManp(1-2)aDManp(1-2)aDManp(1-3)[aDManp(1-6)]bDManp(1-4)[Ac(1-2)]bDGlcpN(1-4)[Ac(1-2)]?DGlcpN(1-P-P-1)Phyt Status: evidence in vitro
Confirmation methods: expression in E. coli; in vitro (membrane preparation) ID: 250 Notes: Reconstitution of the lipid-linked oligosaccharide pathway is presented. | Organism (ID 9605): Saccharomyces cerevisiae Expressed in: E. coli Full structure (ID 36131): Molecule role (analog of): N-glycan | Li et al. 2019 DOI: 10.1038/s41467-019-09752-3 | |
| Synthesized dimer: aDManp(1-3)aDManp Donor (ID 35793): ?DManp(1-P-P-5)xXnucG Acceptor (ID 36122): aDManp(1-3)[aDManp(1-6)]bDManp(1-4)[Ac(1-2)]bDGlcpN(1-4)[Ac(1-2)]?DGlcpN(1-P-P-1)Phyt Status: evidence in vitro
Confirmation methods: expression in E. coli; in vitro (membrane preparation) ID: 251 Notes: Non-physiological substrates were used. | Organism (ID 9605): Saccharomyces cerevisiae Expressed in: E. coli Full structure (ID 36132): Molecule role (analog of): N-glycan | ||
| Enzyme name: alg9p UniProt ID: P53868* CAZy family: GT22 Gene name: ALG9 Gene GenBank ID: 855502* | Synthesized dimer: aDManp(1-2)aDManp Donor (ID 35925): ?DManp(1-P-1)Subst // Subst = dolichol Acceptor (ID 36133): aDManp(1-2)aDManp(1-2)aDManp(1-3)[aDManp(1-3)aDManp(1-6)]bDManp(1-4)[Ac(1-2)]bDGlcpN(1-4)[Ac(1-2)]?DGlcpN(1-P-P-1)Subst // Subst = dolichol Status: direct evidence in vivo
Confirmation methods: mutation; in vitro (membrane preparation); overexpression ID: 252 Notes: ALG9 mannosyltransferase is required for the addition of two different -1,2-linked mannose residues to the LLO (lipid-linked oligosaccharide) | Organism (ID 10934,16389,16652,16657,16658,16659,16660,16661,16662,16663,16664,16665,16666): Saccharomyces cerevisiae YG414, SS328, YG413, YG840, YG399, YG404, YG401, YG406, YG402, YG405, YG407, YG408, YG410 Full structure (ID 36134): CSDB ID(s): 60993 Molecule role (precursor of): N-glycan | Burda et al. 1999 DOI: 10.1093/glycob/9.6.617 Burda et al. 1996 DOI: 10.1073/pnas.93.14.7160 Cipollo et al. 2000 DOI: 10.1074/jbc.275.6.4267 Cipollo et al. 2002b DOI: 10.1093/glycob/cwf083 Frank et al. 2005 DOI: 10.1093/glycob/cwj002 |
| Synthesized dimer: aDManp(1-2)aDManp Donor (ID 35925): ?DManp(1-P-1)Subst // Subst = dolichol Acceptor (ID 36135): aDManp(1-2)aDManp(1-2)aDManp(1-3)[aDManp(1-2)aDManp(1-3)[aDManp(1-6)]aDManp(1-6)]bDManp(1-4)[Ac(1-2)]bDGlcpN(1-4)[Ac(1-2)]?DGlcpN(1-P-P-1)Subst // Subst = dolichol Status: direct evidence in vivo
Confirmation methods: mutation; in vitro (membrane preparation); overexpression ID: 253 Notes: ALG9 mannosyltransferase is required for the addition of two different -1,2-linked mannose residues to the LLO (lipid-linked oligosaccharide). | Organism (ID 10934,16389,16657): Saccharomyces cerevisiae YG414, SS328, YG840 Full structure (ID 36136): CSDB ID(s): 60993 Molecule role (precursor of): N-glycan | Frank et al. 2005 DOI: 10.1093/glycob/cwj002 | |
| Synthesized dimer: aDManp(1-2)aDManp Donor (ID 35793): ?DManp(1-P-P-5)xXnucG Acceptor (ID 36137): aDManp(1-2)aDManp(1-2)aDManp(1-3)[aDManp(1-3)aDManp(1-6)]bDManp(1-4)[Ac(1-2)]bDGlcpN(1-4)[Ac(1-2)]?DGlcpN(1-P-P-1)Phyt Status: evidence in vitro
Confirmation methods: expression in E. coli; in vitro (membrane preparation) ID: 254 Notes: Reconstitution of the lipid-linked oligosaccharide pathway is presented. | Organism (ID 9605): Saccharomyces cerevisiae Expressed in: E. coli Full structure (ID 36138): Molecule role (analog of): N-glycan | Li et al. 2019 DOI: 10.1038/s41467-019-09752-3 | |
| Synthesized dimer: aDManp(1-2)aDManp Donor (ID 35793): ?DManp(1-P-P-5)xXnucG Acceptor (ID 36139): aDManp(1-2)aDManp(1-2)aDManp(1-3)[aDManp(1-2)aDManp(1-3)[aDManp(1-6)]aDManp(1-6)]bDManp(1-4)[Ac(1-2)]bDGlcpN(1-4)[Ac(1-2)]?DGlcpN(1-P-P-1)Phyt Status: evidence in vitro
Confirmation methods: expression in E. coli; in vitro (membrane preparation) ID: 255 Notes: Reconstitution of the lipid-linked oligosaccharide pathway is presented. | Organism (ID 9605): Saccharomyces cerevisiae Expressed in: E. coli Full structure (ID 36140): Molecule role (analog of): N-glycan | ||
| Synthesized dimer: aDManp(1-2)aDManp Donor (ID 35793): ?DManp(1-P-P-5)xXnucG Acceptor (ID 36141): aDManp(1-3)[aDManp(1-3)aDManp(1-6)]bDManp(1-4)[Ac(1-2)]bDGlcpN(1-4)[Ac(1-2)]?DGlcpN(1-P-P-1)Phyt Status: evidence in vitro
Confirmation methods: expression in E. coli; in vitro (membrane preparation) ID: 256 Notes: Non-physiological substrates were used. | Organism (ID 9605): Saccharomyces cerevisiae Expressed in: E. coli Full structure (ID 36142): Molecule role (analog of): N-glycan | ||
| Synthesized dimer: aDManp(1-2)aDManp Donor (ID 35793): ?DManp(1-P-P-5)xXnucG Acceptor (ID 36143): aDManp(1-3)[aDManp(1-2)aDManp(1-3)[aDManp(1-6)]aDManp(1-6)]bDManp(1-4)[Ac(1-2)]bDGlcpN(1-4)[Ac(1-2)]?DGlcpN(1-P-P-1)Phyt Status: evidence in vitro
Confirmation methods: expression in E. coli; in vitro (membrane preparation) ID: 257 Notes: Non-physiological substrates were used. | Organism (ID 9605): Saccharomyces cerevisiae Expressed in: E. coli Full structure (ID 36144): Molecule role (analog of): N-glycan | ||
| Enzyme name: alg7p UniProt ID: P07286* Gene name: ALG7 Gene GenBank ID: 852545* | Synthesized dimer: P(?-?)P Donor (ID 35226): Ac(1-2)?DGlcpN(1-P-P-5)xXnucU Acceptor (ID 36054): P-1)Subst // Subst = dolichol Status: direct evidence in vivo
Confirmation methods: mutation; in vitro (membrane preparation); in vitro (inhibition) ID: 258 Notes: ALG7 gene encodes a dolichol-P-dependent N-acetylglucosamine-1-P transferase (GPT) and functions by initiating the dolichol pathway of protein N-glycosylation. | Organism (ID 9593,9632,10607,16667,16668,16669,16670,16671,16672,16673): Saccharomyces cerevisiae DBY640, DBY1033, BY4741, JRY22, RMY2, ARB, SMKY14, SMKY16, SMKY44, Y260 Full structure (ID 36145): Molecule role (precursor of): N-glycan | Barnes et al. 1984 PMID: 6096695 Rine et al. 1983 PMID: 6316322 Mendelsohn et al. 2005 DOI: 10.1016/j.bbagen.2005.01.017 Kukuruzinska et al. 1994 DOI: 10.1093/glycob/4.4.437 Lennon et al. 1997a DOI: 10.1006/bbrc.1997.7190 Lennon et al. 1997b DOI: 10.1023/A:1006803004151 |
| Enzyme name: alg12p UniProt ID: P53730* CAZy family: GT22 Gene name: ALG12 Gene GenBank ID: 855764* | Synthesized dimer: aDManp(1-6)aDManp Donor (ID 35925): ?DManp(1-P-1)Subst // Subst = dolichol Acceptor (ID 36146): aDManp(1-2)aDManp(1-2)aDManp(1-3)[aDManp(1-3)aDManp(1-6)]bDManp(1-4)[Ac(1-2)]?DGlcpN(1-4)[Ac(1-2)]?DGlcpN(1-P-P-1)Subst // Subst = dolichol Status: indirect evidence in vivo
Confirmation methods: mutation; overexpression ID: 259 Notes: Overexpression of the ALG12 locus in a Δalg9 strain results in a novel oligosaccharide species containing one additional mannose residue which is normally not present in Δalg9 cells | Organism (ID 16674): Saccharomyces cerevisiae YG848 Full structure (ID 36147): CSDB ID(s): 246988 Molecule role (analog of): N-glycan | Burda et al. 1999 DOI: 10.1093/glycob/9.6.617 |
| Synthesized dimer: aDManp(1-6)aDManp Donor (ID 35925): ?DManp(1-P-1)Subst // Subst = dolichol Acceptor (ID 36148): aDManp(1-2)aDManp(1-2)aDManp(1-3)[aDManp(1-2)aDManp(1-3)aDManp(1-6)]bDManp(1-4)[Ac(1-2)]bDGlcpN(1-4)[Ac(1-2)]?DGlcpN(1-P-P-1)Subst // Subst = dolichol Status: direct evidence in vivo
Confirmation methods: mutation; overexpression; in vitro (membrane preparation) ID: 260 Notes: ALG12 locus encodes a novel a-1,6 mannosyltransferase involved in the biosynthesis of the lipid-linked oligosaccharide. Man7GlcNAc2 that accumulates in alg12Δ is a direct product of the alg9p 1,2-a-mannosyltransferase | Organism (ID 10934,16389,16657,16674,16675,16676,16677,16678,16679,16680,16681,16682,16683,16684): Saccharomyces cerevisiae YG414, SS328, YG840, YG848, FHEN005–02C(A), YG841, YG842, YG844, YG843, YG839, YG845, YG846, YG855, YG851 Exact full structure is unknownCSDB ID(s): 60993 Molecule role (precursor of): N-glycan | Burda et al. 1999 DOI: 10.1093/glycob/9.6.617 Cipollo et al. 2002b DOI: 10.1093/glycob/cwf083 Frank et al. 2005 DOI: 10.1093/glycob/cwj002 Cipollo et al. 2002a DOI: 10.1093/glycob/cwf082 | |
| Synthesized dimer: aDManp(1-6)aDManp Donor (ID 35793): ?DManp(1-P-P-5)xXnucG Acceptor (ID 36149): aDManp(1-2)aDManp(1-2)aDManp(1-3)[aDManp(1-2)aDManp(1-3)aDManp(1-6)]bDManp(1-4)[Ac(1-2)]bDGlcpN(1-4)[Ac(1-2)]?DGlcpN(1-P-P-1)Phyt Status: evidence in vitro
Confirmation methods: expression in E. coli; in vitro (membrane preparation) ID: 261 Notes: Reconstitution of the lipid-linked oligosaccharide pathway is presented. | Organism (ID 9605): Saccharomyces cerevisiae Expressed in: E. coli Exact full structure is unknown Molecule role (analog of): N-glycan | Li et al. 2019 DOI: 10.1038/s41467-019-09752-3 | |
| Synthesized dimer: aDManp(1-6)aDManp Donor (ID 35793): ?DManp(1-P-P-5)xXnucG Acceptor (ID 36150): aDManp(1-3)[aDManp(1-2)aDManp(1-3)aDManp(1-6)]bDManp(1-4)[Ac(1-2)]bDGlcpN(1-4)[Ac(1-2)]?DGlcpN(1-P-P-1)Phyt Status: evidence in vitro
Confirmation methods: expression in E. coli; in vitro (membrane preparation) ID: 262 Notes: Non-physiological substrates were used. | Organism (ID 9605): Saccharomyces cerevisiae Expressed in: E. coli Exact full structure is unknown Molecule role (analog of): N-glycan | ||
| Enzyme name: alg6p UniProt ID: Q12001* CAZy family: GT57 Gene name: ALG6 Gene GenBank ID: 854163* | Synthesized dimer: aDGlcp(1-3)aDManp Donor (ID 36151): bDGlcp(1-P-1)Subst // Subst = dolichol Acceptor (ID 36128): aDManp(1-2)aDManp(1-2)aDManp(1-3)[aDManp(1-6)]bDManp(1-4)[Ac(1-2)]bDGlcpN(1-4)[Ac(1-2)]?DGlcpN(1-P-P-1)Subst // Subst = dolichol Status: indirect evidence in vivo
Confirmation methods: mutation; overexpression ID: 263 Notes: Glucosylation of lipid-linked oligosaccharides is necessary for the efficient transfer of the core oligosaccharide to a protein. This structure was obtained only in a mutant strain (delta alg9). | Organism (ID 16685): Saccharomyces cerevisiae YG859 Full structure (ID 36152): CSDB ID(s): 60994, 61004 Molecule role (analog of): N-glycan | Huffaker et al. 1983 DOI: 10.1073/pnas.80.24.7466 Burda et al. 1999 DOI: 10.1093/glycob/9.6.617 Imbach et al. 1999 DOI: 10.1073/pnas.96.12.6982 |
| Synthesized dimer: aDGlcp(1-3)aDManp Donor (ID 36151): bDGlcp(1-P-1)Subst // Subst = dolichol Acceptor (ID 36153): aDManp(1-2)aDManp(1-2)aDManp(1-3)[aDManp(1-2)aDManp(1-3)[aDManp(1-2)aDManp(1-6)]aDManp(1-6)]bDManp(1-4)[Ac(1-2)]bDGlcpN(1-4)[Ac(1-2)]?DGlcpN(1-P-P-1)Subst // Subst = dolichol Status: indirect evidence in vivo
Confirmation methods: mutation; complementation; expression in MI8-5 cells ID: 264 Notes: Alg6 mutants accumulate lipid-linked Man9GlcNAc2, suggesting that this locus encodes an endoplasmic glucosyltransferase. | Organism (ID 16389,16400,16408,16686,16687,16688,16689): Saccharomyces cerevisiae SS328, MA7-B, SS330, PRY103, YG36, YG227, YG91 Organ/tissue: MI8-5 cells Full structure (ID 36154): CSDB ID(s): 60994, 61004 Molecule role (precursor of): N-glycan | Huffaker et al. 1983 DOI: 10.1073/pnas.80.24.7466 Burda et al. 1999 DOI: 10.1093/glycob/9.6.617 Imbach et al. 1999 DOI: 10.1073/pnas.96.12.6982 Reiss et al. 1996 DOI: 10.1093/glycob/6.5.493 Quellhorst et al. 1999 DOI: 10.1093/glycob/9.1.65 | |
| Enzyme name: alg5p UniProt ID: P40350* CAZy family: GT2 Gene name: ALG5 Gene GenBank ID: 855874* | Synthesized dimer: bDGlcp(1-?)P Donor (ID 34898): aDGlcp(1-P-P-5)xXnucU Acceptor (ID 36054): P-1)Subst // Subst = dolichol Status: direct evidence in vivo
Confirmation methods: mutation; in vitro (membrane preparation); overexpression; expression in E.coli ID: 265 Notes: Overexpression of Alg5p in both yeast and Escherichia coli results in an increase of UDP-glucose : dolichyl-phosphate glucosyltransferase activity. The ALG5 locus encodes Dol-P-Glc synthase, and its inactivation results in the inability of cells to synthesize Dol-P-Glc | Organism (ID 10890,16389,16451,16589,16690,16691,16692,16693,16694,16695,16696,16697,16698): Saccharomyces cerevisiae YG0091, SS328, PRY98, DBY746, SS328xSS330, YG0022, YG0092, YG0093, YG0094, YG0095, FC2a, YG92, YG409 Expressed in: E. coli Exact full structure is unknown Molecule role (precursor of): N-glycan | Heesen et al. 1994 DOI: 10.1111/j.1432-1033.1994.tb19996.x Huffaker et al. 1983 DOI: 10.1073/pnas.80.24.7466 Burda et al. 1996 DOI: 10.1073/pnas.93.14.7160 Imbach et al. 1999 DOI: 10.1073/pnas.96.12.6982 |
| Enzyme name: alg8p UniProt ID: P40351* CAZy family: GT57 Gene name: ALG8 Gene GenBank ID: 854233* | Synthesized dimer: aDGlcp(1-3)aDGlcp Donor (ID 36151): bDGlcp(1-P-1)Subst // Subst = dolichol Acceptor (ID 36155): aDGlcp(1-3)aDManp(1-2)aDManp(1-2)aDManp(1-3)[aDManp(1-2)aDManp(1-3)[aDManp(1-2)aDManp(1-6)]aDManp(1-6)]bDManp(1-4)[Ac(1-2)]?DGlcpN(1-4)[Ac(1-2)]?DGlcpN(1-P-P-1)Subst // Subst = dolichol Status: direct evidence in vivo
Confirmation methods: mutation; in vitro (membrane preparation); complimentation ID: 266 Notes: Cells carrying the alg8-1 mutation accumulate Glc1Man9GlcNAc2-lipid both in vivo and in vitro. Alg5, alg6 and alg8 mutations do not show any detectable growth defect, but introducition of these mutations into a strain with wbp1-1 mutation leads to a severe growth defect. | Organism (ID 9593,9632,16389,16699,16700): Saccharomyces cerevisiae DBY640, DBY1033, SS328, PRY107, YG0100 Full structure (ID 36156): CSDB ID(s): 60994, 61004 Molecule role (precursor of): N-glycan | Runge et al. 1986 PMID: 3536907 Stagljar et al. 1994 DOI: 10.1073/pnas.91.13.5977 |
| Enzyme name: alg10p UniProt ID: P50076* CAZy family: GT59 Gene name: DIE2 Gene GenBank ID: 853142* | Synthesized dimer: aDGlcp(1-2)aDGlcp Donor (ID 36151): bDGlcp(1-P-1)Subst // Subst = dolichol Acceptor (ID 36157): aDGlcp(1-3)aDGlcp(1-3)aDManp(1-2)aDManp(1-2)aDManp(1-3)[aDManp(1-2)aDManp(1-3)[aDManp(1-2)aDManp(1-6)]aDManp(1-6)]bDManp(1-4)[Ac(1-2)]?DGlcpN(1-4)[Ac(1-2)]?DGlcpN(1-P-P-1)Subst // Subst = dolichol Status: direct evidence in vivo
Confirmation methods: mutation; in vitro (membrane preparation); overexpression ID: 267 Notes: Hypoglycosylation of secreted proteins in alg10 deletion strains demonstrates that the terminal a-1,2-linked glucose residue is a key element in substrate recognition by the oligosaccharyltransferase. | Organism (ID 16389,16701,16702,16703,16704,16705,16706,16707): Saccharomyces cerevisiae SS328, YG428, YG651, YG654, YG653, YG650, YG730, YG125 Full structure (ID 36158): CSDB ID(s): 60994 Molecule role: N-glycan | Burda et al. 1998 DOI: 10.1093/glycob/8.5.455 |
| Enzyme name: gpi1p UniProt ID: P53306* Gene name: GPI1 Gene GenBank ID: 853130* | Synthesized dimer: aDGlcpN(1-6)myoIno Donor (ID 35041): Ac(1-2)aDGlcpN(1-P-P-5)xXnucU Acceptor (ID 36159): LIP(1-2)[LIP(1-3),xXmyoIno(1-P-1)]xDGro Status: direct evidence in vivo
Confirmation methods: mutation; in vitro (membrane preparation); expression in E. coli; complementation ID: 268 Notes: Gpi1p participates in the first step in glycosylphosphatidylinositol anchor synthesis. Overexpression of the GPI2 gene causes partial suppression of the gpi1 mutant's temperature sensitivity, a result that suggests that the Gpi1 and Gpi2 proteins interact with one another in vivo. The synthesized product is subsequently deacetylated by Gpi12p. | Organism (ID 16529,16708,16709,16710,16711,16712,16713): Saccharomyces cerevisiae PP-1B, XM37-10C, PP-1D, L5686, L5487, 9933-13A, JF1015 Full structure (ID 36160): Molecule role (precursor of): GPI | Orlean et al. 2012 DOI: 10.1534/genetics.112.144485 Leidich et al. 1996 DOI: 10.1074/jbc.271.44.27829 Leidich et al. 1995 DOI: 10.1074/jbc.270.22.13029 Fabre et al. 2005 DOI: 10.1111/j.1742-4658.2005.04551.x |
| Enzyme name: gpi2p UniProt ID: P46961* Gene name: GPI2 Gene GenBank ID: 856029* | Synthesized dimer: aDGlcpN(1-6)myoIno Donor (ID 35041): Ac(1-2)aDGlcpN(1-P-P-5)xXnucU Acceptor (ID 36159): LIP(1-2)[LIP(1-3),xXmyoIno(1-P-1)]xDGro Status: direct evidence in vivo
Confirmation methods: mutation; in vitro (membrane preparation); in vitro (complementation); overexpression; expression in C. albicans ID: 271 Notes: Overexpression of the GPI2 gene causes partial suppression of the gpi1 mutant's temperature sensitivity, a result that suggests that the Gpi1 and Gpi2 proteins interact with one another in vivo. Gpi2p is a component of the GlcNAc-PI synthase complex. GPI2 encodes for one of the six accessory subunits of the GPI-N-acetylglucosaminyltransferase (GPI-GnT) complex that catalyzes the first step of GPI biosynthesis in S. cerevisiae. The synthesized product is subsequently deacetylated by Gpi12p. | Organism (ID 16529,16585,16708,16712,16713,16714): Saccharomyces cerevisiae PP-1B, YPH500, XM37-10C, 9933-13A, JF1015, YMW3 Organ/tissue: C. albicans Full structure (ID 36160): Molecule role (precursor of): GPI | Orlean et al. 2012 DOI: 10.1534/genetics.112.144485 Leidich et al. 1996 DOI: 10.1074/jbc.271.44.27829 Leidich et al. 1995 DOI: 10.1074/jbc.270.22.13029 Kostova et al. 2000 DOI: 10.1042/bj3500815 Yadav et al. 2014 DOI: 10.1007/s10719-014-9536-8 |
| Enzyme name: gpi3p UniProt ID: P32363* CAZy family: GT4 Gene name: SPT14 Gene GenBank ID: 855928* | Synthesized dimer: aDGlcpN(1-6)myoIno Donor (ID 35041): Ac(1-2)aDGlcpN(1-P-P-5)xXnucU Acceptor (ID 36159): LIP(1-2)[LIP(1-3),xXmyoIno(1-P-1)]xDGro Status: direct evidence in vivo
Confirmation methods: mutation; in vitro (membrane preparation); in vitro (inhibition); in vitro (complementation); expression in E. coli, overexpression ID: 274 Notes: Spt14 mutant cells are defective in GPI anchoring due to a defect in the synthesis of GIcNAc-PI, the first step of GPI synthesis. Gpi3p is catalytic subunit in the complex catalyzing the transfer of N-acetylglucosamine from UDP-N-acetylglucosamine to phosphatidylinositol, the first step of GPI biosynthesis. Gpi3p is the UDP-GlcNAc-binding subunit of the yeast GlcNAc-PI synthetic complex. The synthesized product is subsequently deacetylated by Gpi12p. | Organism (ID 16529,16708,16712,16713,16714,16715,16716,16717): Saccharomyces cerevisiae PP-1B, XM37-10C, 9933-13A, JF1015, YMW3, RH329-3B, RH329-3C, RH401-7C Expressed in: E. coli Full structure (ID 36160): Molecule role (precursor of): GPI | Orlean et al. 2012 DOI: 10.1534/genetics.112.144485 Leidich et al. 1995 DOI: 10.1074/jbc.270.22.13029 Kostova et al. 2000 DOI: 10.1042/bj3500815 Schonbachler et al. 1995 DOI: 10.1002/j.1460-2075.1995.tb07152.x Kostova et al. 2003 DOI: 10.1046/j.1432-1033.2003.03844.x |
| Enzyme name: gpi7p UniProt ID: P40367* Gene name: GPI7/LAS21 Gene GenBank ID: 853384* | Synthesized dimer: P(?-6)aDManp Donor (ID 36161): LIP(1-1)[LIP(1-3),xXEtN(1-P-2)]x?Gro Acceptor (ID 36162): LIP(1-2)[LIP(1-3),aDManp(1-2)[xXEtN(1-P-6)]aDManp(1-2)aDManp(1-6)[xXEtN(1-P-2)]aDManp(1-4)aDGlcpN(1-6)[LIP(1-?)]xXmyoIno(1-P-1)]xDGro Status: direct evidence in vivo
Confirmation methods: mutation; expression in E. coli; complementation; in vitro (mutation) ID: 277 Notes: Gpi7p itself is the transferase adding a side chain to the a1,6-linked mannose of the GPI core structure | Organism (ID 9585,16606,16630,16718,16719,16720,16721,16722,16723,16724,16725,16726,16727,16728,16729): Saccharomyces cerevisiae X2180-1A, HMSF176, W303-1B, FBY11, FBY15, FBY122, FBY182, FBY49, C4, HMSF331, LB2134-3B, YNS3-7A, FBY118, FBY40, FBY43 Expressed in: E. coli Full structure (ID 36163): Molecule role (precursor of): GPI | Orlean et al. 2012 DOI: 10.1534/genetics.112.144485 Benachour et al. 1999 DOI: 10.1074/jbc.274.21.15251 Fujita et al. 2004 DOI: 10.1074/jbc.M405232200 Imhof et al. 2000 DOI: 10.1093/glycob/10.12.1271 |
| Enzyme name: gpi10p UniProt ID: P30777* CAZy family: GT22 Gene name: GPI10 Gene GenBank ID: 852735* | Synthesized dimer: aDManp(1-2)aDManp Donor (ID 35925): ?DManp(1-P-1)Subst // Subst = dolichol Acceptor (ID 36164): LIP(1-2)[LIP(1-3),aDManp(1-6)[xXEtN(1-P-2)]aDManp(1-4)[Ac(1-2)]aDGlcpN(1-6)[LIP(1-?)]xXmyoIno(1-P-1)]xDGro Status: direct evidence in vivo
Confirmation methods: mutation; in vitro (membrane preparation); overexpression; ID: 278 Notes: Gpi10p mannosyltransferases adds the third mannose of the GPI precursor. Gpi10–1 cells grow at a normal rate and make normal amounts of GPI proteins,but the microsomes of gpi10–1 are completely unable to add the third mannnoseto GPI precursor in an in vitro assay. Gpi10 deletant cells cannot attach the third mannose in an a-1,2 linkage to the GPI core-structure intermediate. | Organism (ID 16718,16730,16731,16732,16733,16734,16735,16736,16737,16738,16739,16740,16741,16742,16743,16744,16745,16746,16747,16748,16749,16750,16751,16752,16753): Saccharomyces cerevisiae FBY11, GY1450, YMW1, W303–1A, W303–1B, X2180–1A, FBY169, FBY618, FBY637, HJ000, FBY37, FBY38, FBY39, FBY310, FY1679, Cen.PK2, RH3698, RH3699, RH3994, RH3995, RH3996, RH3997, RH3998, RH3999, RH1657 Full structure (ID 36165): Molecule role: GPI | Orlean et al. 2012 DOI: 10.1534/genetics.112.144485 Imhof et al. 2000 DOI: 10.1093/glycob/10.12.1271 Canivenc-Gansel et al. 1998 DOI: 10.1093/glycob/8.8.761 Wiedman et al. 2007 DOI: 10.1111/j.1567-1364.2006.00139.x Sutterlin et al. 1998 DOI: 10.1042/bj3320153 |
| Enzyme name: gpi14p UniProt ID: P47088* CAZy family: GT50 Gene name: GPI14 Gene GenBank ID: 853470* | Synthesized dimer: aDManp(1-4)aDGlcpN Donor (ID 35925): ?DManp(1-P-1)Subst // Subst = dolichol Acceptor (ID 36166): LIP(1-2)[LIP(1-3),aDGlcpN(1-6)xXmyoIno(1-P-1)]xDGro Status: indirect evidence in vivo
Confirmation methods: mutation ID: 280 Notes: Partial inactivation of Gpi14p causes defects in the cell wall structure. Gpi14p is involved in the addition of the first mannose residue to the GPI anchor precursor. | Organism (ID 16743,16754,16755,16756,16757,16758,16759,16760,16761,16762,16763,16764,16765,16766,16767,16768): Saccharomyces cerevisiae FY1679, H1480, E0/YUG37, E37, H3204, H3205, H3211, H3212, H3213, H3238, H3263, H3293, H3296, H3302, BJ10242, BJ5410 Full structure (ID 36167): Molecule role (precursor of): GPI | Orlean et al. 2012 DOI: 10.1534/genetics.112.144485 Imhof et al. 2000 DOI: 10.1093/glycob/10.12.1271 Davydenko et al. 2005 DOI: 10.1002/yea.1286 Subramanian et al. 2006 DOI: 10.1073 pnas.0505570103 Ashida et al. 2005 DOI: 10.1091/mbc.E04–09–0802 Naik at al. 1998 PMID: 9649520 |
| Synthesized dimer: aDManp(1-4)aDGlcpN Donor (ID 35925): ?DManp(1-P-1)Subst // Subst = dolichol Acceptor (ID 36168): lXOco(1-2)[lXOco(1-3),aDGlcpN(1-6)xXmyoIno(1-P-1)]xDGro Status: evidence in vitro
Confirmation methods: in vitro (membrane preparation) ID: 281 Notes: The PIG-M homologues from humans, Plasmodium falciparum (PfPIG-M), and Saccharomyces cerevisiae (GPI14) were cloned to test whether they could complement GPI-MT-I-deficient mammalian cells | Organism (ID 9605): Saccharomyces cerevisiae Full structure (ID 36169): Molecule role (precursor of): GPI | Kim et al. 2007 PMID: 17978585 | |
| Enzyme name: gpi15p UniProt ID: P53961* Gene name: GPI15 Gene GenBank ID: 855690* | Synthesized dimer: aDGlcpN(1-6)myoIno Donor (ID 35226): Ac(1-2)?DGlcpN(1-P-P-5)xXnucU Acceptor (ID 36159): LIP(1-2)[LIP(1-3),xXmyoIno(1-P-1)]xDGro Status: direct evidence in vivo
Confirmation methods: mutation; in vitro (membrane preparation); in vitro (mutation) ID: 282 Notes: GPI15 encodes a protein subunit involved in GPI biosynthesis. The synthesized product is subsequently deacetylated by Gpi12p. | Organism (ID 16714): Saccharomyces cerevisiae YMW3 Full structure (ID 36160): Molecule role (precursor of): GPI | Orlean et al. 2012 DOI: 10.1534/genetics.112.144485 Yan et al. 2001 DOI: 10.1002/yea.783 |
| Enzyme name: gpi18p UniProt ID: P38211* CAZy family: GT76 Gene name: GPI18 Gene GenBank ID: 852289* | Synthesized dimer: aDManp(1-6)aDManp Donor (ID 35925): ?DManp(1-P-1)Subst // Subst = dolichol Acceptor (ID 36170): LIP(1-2)[LIP(1-3),xXEtN(1-P-2)aDManp(1-4)aDGlcpN(1-6)[LIP(1-?)]xXmyoIno(1-P-1)]xDGro Status: indirect evidence in vivo
Confirmation methods: mutation; in silico; complementation ID: 284 Notes: Gpi18 is required for the addition of a second Man to the GPI precursor. The human homologue of GPI18 can substitute for its S. cerevisiae counterpart in vivo | Organism (ID 10607,12269,16769,16770,16771): Saccharomyces cerevisiae BY4741, BY4743, RYY51, D9WT, KA31a Full structure (ID 36171): Molecule role (precursor of): GPI | Orlean et al. 2012 DOI: 10.1534/genetics.112.144485 Fabre et al. 2005 DOI: 10.1111/j.1742-4658.2005.04551.x Kang et al. 2005 DOI: 10.1074/jbc.M413867200 Sato et al. 2007 DOI: 10.1091/mbc.e07-03-0258 |
| Enzyme name: gpi19p UniProt ID: Q04082* Gene name: GPI19 Gene GenBank ID: 852047* | Synthesized dimer: aDGlcpN(1-6)myoIno Donor (ID 35226): Ac(1-2)?DGlcpN(1-P-P-5)xXnucU Acceptor (ID 36159): LIP(1-2)[LIP(1-3),xXmyoIno(1-P-1)]xDGro Status: direct evidence in vivo
Confirmation methods: mutation; in vitro (membrane preparation); in vitro (mutation) ID: 286 Notes: Gpi19 protein associates with the yeast GPI-GlcNAc transferase in vivo, as judged by coimmuneprecipitation with the Gpi2 subunit. The synthesized product is subsequently deacetylated by Gpi12p. | Organism (ID 16772,16773,16774,16775,16776,16777,16778,16779,16780,16781,16782,16783,16784,16785,16786,16787,16788): Saccharomyces cerevisiae DL2987, DL3050, DL3087, DL3089, DL3091, DL3093, DL3095, DL3097, DL3099, DL3102, DL3103, DL3104, DL3105, DL3106, DL3107, DL3149, DL3151 Full structure (ID 36160): Molecule role (precursor of): GPI | Orlean et al. 2012 DOI: 10.1534/genetics.112.144485 Newman et al. 2005 DOI: 10.1128/EC.4.11.1801–1807.2005 |
| Enzyme name: pga1p UniProt ID: P53896* Gene name: PGA1 Gene GenBank ID: 855564* | Synthesized dimer: aDManp(1-6)aDManp Donor (ID 35925): ?DManp(1-P-1)Subst // Subst = dolichol Acceptor (ID 36170): LIP(1-2)[LIP(1-3),xXEtN(1-P-2)aDManp(1-4)aDGlcpN(1-6)[LIP(1-?)]xXmyoIno(1-P-1)]xDGro Status: indirect evidence in vivo
Confirmation methods: mutation; overexpression ID: 287 Notes: Pga1 is an additional essential component of the yeast GPI-MT II, that collaborates with another subunit Gpi18. | Organism (ID 10607,12269,16771): Saccharomyces cerevisiae BY4741, BY4743, KA31a Full structure (ID 36171): Molecule role (precursor of): GPI | Orlean et al. 2012 DOI: 10.1534/genetics.112.144485 Sato et al. 2007 DOI: 10.1091/mbc.e07-03-0258 |
| Enzyme name: smp3p UniProt ID: Q04174* CAZy family: GT22 Gene name: SMP3 Gene GenBank ID: 854320* | Synthesized dimer: aDManp(1-2)aDManp Donor (ID 35925): ?DManp(1-P-1)Subst // Subst = dolichol Acceptor (ID 36172): LIP(1-2)[LIP(1-3),aDManp(1-2)aDManp(1-6)[xXEtN(1-P-2)]aDManp(1-4)aDGlcpN(1-6)[LIP(1-?)]xXmyoIno(1-P-1)]xDGro Status: indirect evidence in vivo
Confirmation methods: mutation ID: 288 Notes: The SMP3 gene encodes a hydrophobic protein essential for cell growth. Expression of human SMP3 in yeast complements growth and biochemical defects of smp3 mutants and permits in vivo mannosylation of trimannosyl (Man3)-GPIs | Organism (ID 16731,16769,16789,16790,16791): Saccharomyces cerevisiae YMW1, RYY51, YMW2, KH8, YJG1 Full structure (ID 36173): Molecule role (precursor of): GPI | Orlean et al. 2012 DOI: 10.1534/genetics.112.144485 Grimme et al. 2001 DOI: 10.1074/jbc.M101986200 Irie et al. 1991 DOI: 10.1007/BF00269857 Taron et al. 2004 DOI: 10.1074/jbc.M405081200 |
| Enzyme name: gas1p UniProt ID: P22146* CAZy family: CBM43; GH72 Gene name: GAS1 Gene GenBank ID: 855355* | Synthesized dimer: bDGlcp(1-3)bDGlcp Donor (ID 17430): -3)bDGlcp(1- Acceptor (ID 17430): -3)bDGlcp(1- Status: direct evidence in vivo
Confirmation methods: mutation; in vitro (membrane preparation); in vitro (purified protein); in vitro (mutation); expression in P. pastoris; expression in E. coli; overexpression; complementation; ID: 290 Notes: Gas1p is β(1,3)-glucanosyltransferase that catalyses the transfer of segments of β(1,3)-glucan to other β(1,3)-glucan chains. GAS1 splits internally a 1,3-b-glucan molecule and transfers the newly generated reducing end to the non-reducing end of another 1,3-b-glucan molecule forming a 1,3-b linkage, resulting in the elongation of 1,3-b-glucan chains. Thus, the following reactions occur: 1). E + G(x) -> E-G(y) + G(x-y); 2). E-G(y) + G(x) -> E + G(x+y). The gas1 disruption mutant shows a decrease in growth rate, formation of multibudded cells and an increase in the mannose/glucose ratio in the cell wall carbohydrate. | Organism (ID 10607,16454,16630,16792,16793,16794,16795,16796,16797,16798,16799,16800,16801,16802,16803,16804,16805,16806,16807,16808,16809,16810,16811,16812,16813,16814,16815,16816,16817,16818): Saccharomyces cerevisiae BY4741, W303-1A, W303-1B, Y604, Y1306, Y1303, WB2d, WA1d, LF7, LF8, LF9, LF10, LF11, BJ5464, NTY3, NTY9, NTY10, NTY139, LPY4916, LPY13554, LPY13559, LPY13562, LPY10362, LPY13563, LPY13568, LPY13569, LPY13570, LPY13571, LPY10129, LPY13543 Expressed in: P. pastoris; E. coli Full structure (ID 4413): CSDB ID(s): 40001, 40758, 41223, 43089, 43303, 43337, 43365, 43554, 43666, 43702, 43788, 44123, 44271, 44887, 45235, 45261, 45386, 45573, 46045, 105065, 105066, 110149, 117639, 117963, 124665, 125817, 125854, 130960, 133021, 138197, 139820, 140456, 143678, 149427, 149869, 149872, 149875 Molecule role (precursor of): glycoprotein | Mouyna et al. 2000 DOI: 10.1074/jbc.275.20.14882 Carotti et al. 2002 DOI: 10.1002/yea.905 Carotti et al. 2004 DOI: 10.1111/j.1432-1033.2004.04297.x Papaleo et al. 2006 DOI: 10.1007/s00894-005-0025-7 Tomishige et al. 2003 DOI: 10.1007/s00438-003-0864-9 Koch et al. 2009 DOI: 10.1073 pnas.0900809106 Eustice et al. 2014 DOI: 10.1534/genetics.113.158824 Ha et al. 2014 DOI: 10.1093/nar/gku570 Fujita et al. 2006 DOI: 10.1091/mbc.E05–05–0443 Gualtieri et al. 2004 DOI: 10.1002/yea.1155 Dijkgraaf et al. 2002 DOI: 10.1002/yea.866 |
| Enzyme name: chs1p UniProt ID: P08004* CAZy family: GT2 Gene name: CHS1 Gene GenBank ID: 855529* | Synthesized dimer: bDGlcpN(1-4)bDGlcpN Donor (ID 35226): Ac(1-2)?DGlcpN(1-P-P-5)xXnucU Acceptor (ID 36174): -4)[Ac(1-2)]bDGlcpN(1- Status: direct evidence in vivo
Confirmation methods: mutation; in vitro (crude extract); in vitro (membrane preparation); in vitro (inhibition) ID: 291 Notes: Chs1 has a secondary role as a repair enzyme, while Chs2 is mainly responsible for septum formation. Both Chs1 and Chs2 collaborate in the repair synthesis of chitin, whereas Chs1 cannot substitute for Chs2 in septum formation. The new UDP-GlcNAc competitor was found to competitively inhibit chitin synthetase from Saccharomyces cerevisiae with respect to UDP-GlcNAc, but displayed minimal antifungal activity | Organism (ID 9830,16819,16820,16821,16822): Saccharomyces cerevisiae D3C, ATCC 26109, D3A, D3B, D3D Full structure (ID 10041): CSDB ID(s): 4580, 10560, 40517, 40868, 40899, 40906, 41831, 42301, 42308, 42317, 42328, 42348, 42350, 42363, 42364, 42367, 42376, 42398, 42477, 42638, 43385, 44408, 44855, 44889, 44899, 44913, 44915, 44916, 44917, 44923, 44925, 44940, 44941, 46290, 46291, 46292, 46304, 46311, 46323, 46396, 46404, 46570, 46683, 48634, 48636, 48650, 48651, 48652, 48689, 48691, 48694, 48715, 48752, 48757, 48764, 48769, 48774, 48785, 48794, 48795, 48801, 48804, 48828, 48853, 48859, 48872, 48900, 48901, 48902, 49019, 49036, 49047, 49066, 49075, 49083, 49132, 49133, 49501, 49502, 49523, 49524, 49544, 49564, 49568, 49862, 49870, 49873, 50015, 50301, 50302, 50303, 50304, 50305, 50306, 50307, 50308, 50309, 50310, 50311, 50312, 50313, 50314, 50316, 50317, 50318, 50320, 50845, 51623, 68682, 101632, 111874, 118702, 121703, 131817, 139821, 139869, 143656, 143703, 145244, 146940, 147175, 147987, 149428, 149871, 149874, 149876 Molecule role: cell wall | Leal-Morales et al. 1994 DOI: 10.1099/13500872-140-9-2207 Bowen et al. 1992 DOI: 10.1073/pnas.89.2.519 Cabib et al. 1989 PMID: 2523889 Behr et al. 2001 DOI: 10.1080/14756360109162360 Bulawa 1992 DOI: 10.1128/mcb.12.4.1764 |
| Enzyme name: chs2p UniProt ID: P14180* CAZy family: GT2 Gene name: CHS2 Gene GenBank ID: 852326* | Synthesized dimer: bDGlcpN(1-4)bDGlcpN Donor (ID 35226): Ac(1-2)?DGlcpN(1-P-P-5)xXnucU Acceptor (ID 36174): -4)[Ac(1-2)]bDGlcpN(1- Status: direct evidence in vivo
Confirmation methods: mutation; in vitro (membrane preparation); in vitro (crude extract); in vitro (purified protein); overexpression ID: 292 Notes: Both Chs1 and Chs2 collaborate in the repair synthesis of chitin, whereas Chs1 cannot substitute for Chs2 in septum formation. Chitin synthase 2 has a region whose sequence is highly conserved in all chitin synthases.Substitutions of conserved amino acids in this region with alanine identified 2 domains in which any conserved amino acid could not be replaced by alanine to retain enzyme activity. Chs2 is specific for primary septum formation, whereas Chs3 is responsible for chitin in the ring at bud emergence and in the cell wall | Organism (ID 9830,9831,16820,16821,16822,16823,16824,16825,16826,16827,16828,16829,16830,16831,16832,16833,16834,16835,16836,16837,16838,16839,16840): Saccharomyces cerevisiae D3C, ECY36-3C, D3A, D3B, D3D, RRA400-1U, YMS123+, R27-7C-1C, RRA400, ECY33-16C, ECY33-18A, ECY19A2-5B, ECY36-3A, ECY36-3D, ASY2, ASY2-24A, ASY2-24B, ASY2-24C, ASY2-24D, EMY12-1C, EMY13-2C, H182-6-3, H102-3-1 Full structure (ID 10041): CSDB ID(s): 40517, 43385, 44855, 44889, 44925, 46291, 46304, 139821, 149428, 149871, 149874, 149876 Molecule role: cell wall | Leal-Morales et al. 1994 DOI: 10.1099/13500872-140-9-2207 Bowen et al. 1992 DOI: 10.1073/pnas.89.2.519 Cabib et al. 1989 PMID: 2523889 Yabe et al. 1998 DOI: 10.1046/j.1432-1327.1998.2580941.x Nagahashi et al. 1995 DOI: 10.1074/jbc.270.23.13961 Uchida et al. 1996 DOI: 10.1093/oxfordjournals.jbchem.a021293 Shaw et al. 1991 PMID: 2050738 |
| Enzyme name: chs3p UniProt ID: P29465* CAZy family: GT2 Gene name: CHS3/CAL1/CSD2/DIT101/KTI2 Gene GenBank ID: 852311* | Synthesized dimer: bDGlcpN(1-4)bDGlcpN Donor (ID 35226): Ac(1-2)?DGlcpN(1-P-P-5)xXnucU Acceptor (ID 36174): -4)[Ac(1-2)]bDGlcpN(1- Status: direct evidence in vivo
Confirmation methods: mutation; in vitro (membrane preparation); overexpression; complementation; in vitro (membrane preparation) ID: 293 Notes: Chs3 is involved in formation of the ring of chitin found at the base of an emerging bud and of the cell wall chitin. chitin synthase III (CSIII) is responsible for the synthesis of most of the chitin found in the cell. Mutants in CHS3 gene show a defect of spore wall chitosan and a drastically reduced amount of vegetative cell wall chitin. Transformation of the mutants with a plasmid carrying CAL1 restored chitin synthase 3 activity | Organism (ID 9831,16398,16437,16530,16827,16828,16829,16830,16831,16832,16833,16834,16835,16836,16837,16838,16839,16840,16841,16842,16843,16844,16845,16846,16847,16848,16849,16850,16851,16852,16853,16854,16855,16856,16857,16858,16859,16860,16861,16862,16863,16864,16865,16866): Saccharomyces cerevisiae ECY36-3C, W303, YPH274, PP-1A, ECY33-16C, ECY33-18A, ECY19A2-5B, ECY36-3A, ECY36-3D, ASY2, ASY2-24A, ASY2-24B, ASY2-24C, ASY2-24D, EMY12-1C, EMY13-2C, H182-6-3, H102-3-1, 163, 1681, 5A, 68-11, 7456-1D, AP3, CR4-2, CR4-3, HV23-3, ECY18-4B, ECY33-2A, JS163-1B, JS163-4C, JS181, JS182, PB2-1C, SHU32, TCY1, XD 1, XD 16-3B, XD 16-3D, XD16, XD17, XD18, XM33-7B, Y1170 Full structure (ID 10041): CSDB ID(s): 40517, 43385, 44855, 44889, 44925, 46291, 46304, 139821, 149428, 149871, 149874, 149876 Molecule role: cell wall | Carotti et al. 2002 DOI: 10.1002/yea.905 Bulawa 1992 DOI: 10.1128/mcb.12.4.1764 Shaw et al. 1991 PMID: 2050738 Choi et al. 1994 PMID: 8197125 Cos et al. 1998 DOI: 10.1046/j.1432-1327.1998.2560419.x Pammer et al. 1992 DOI: 10.1002/yea.320081211 Valdivieso et al. 1991 DOI: 10.1083/jcb.114.1.101 |
| Enzyme name: fks1p UniProt ID: P38631* CAZy family: GT48 Gene name: FKS1/CND1/CWH53/ETG1/GLS1/GSC1/PBR1 Gene GenBank ID: 851055* | Synthesized dimer: bDGlcp(1-3)bDGlcp Donor (ID 34898): aDGlcp(1-P-P-5)xXnucU Acceptor (ID 17430): -3)bDGlcp(1- Status: direct evidence in vivo
Confirmation methods: mutation; in vitro (crude extract); expression in E. coli; in vitro (membrane preparation); in vitro (purified protein); overexpression; in vitro (inhibition) ID: 294 Notes: Fks1p and Fks2p are related proteins thought to be catalytic subunits of the b-1,3-glucan synthase. FKS1 encodes a subunit of 1,3-f-D-glucan synthase. FKS1 and ETG1 are identical. Disruption of FKS1 leads to reduced levels of both (1,3)b-D-glucan synthase activity and the alkali-insoluble cell wall fraction. The activity of 1,3-b-D-glucan synthase, the product of which is essential for cell wall integrity, is regulated by a GTPbinding protein Rho1p | Organism (ID 9585,9927,10761,16454,16585,16867,16868,16869,16870,16871,16872,16873,16874,16875,16876,16877,16878,16879,16880,16881,16882,16883,16884,16885,16886,16887,16888,16889,16890,16891,16892,16893,16894,16895,16896,16897,16898,16899,16900,16901,16902,16903,16904,16905,16906,16907,16908,16909,16910,16911,16912,16913,16914,16915,16916,16917,16918,16919,16920,16921): Saccharomyces cerevisiae X2180-1A, SEY6210, YPH499, W303-1A, YPH500, CC1, CC10B, CC15, HAB251-15B, HAB900, HAB902, HAB904, HAB905, HAB906, HAB907, HAB909, HAB912, HAB915, HAB916, HAB917, HAB918, HAB919, HAB920, HAB921, HAB922, HV1, HV5, MS14, R560-1C, YFF2714-5B, YFF2936, YFK007, YFK016, YFK419, YOC1001, YOC1002, YOC1072, YOC1074, YOC1076, YOC1078, YOC1080, YOC1082, YOC1084, YOC1086, YOC1087, YOC1088, YOC1090, YOC4064, YOC4065, YOC4067, YOC4068, YOC4081, YOC4082, YOC4083, YOC4084, YOC4085, YOC710, YOC724, YOC792, YPH501 Expressed in: E. coli Full structure (ID 4413): CSDB ID(s): 40001, 40758, 41223, 43089, 43303, 43337, 43365, 43554, 43666, 43702, 43788, 44123, 44271, 44887, 45235, 45261, 45386, 45573, 46045, 105065, 105066, 110149, 117639, 117963, 124665, 125817, 125854, 130960, 133021, 138197, 139820, 140456, 143678, 149427, 149869, 149872, 149875 Molecule role: cell wall | Dijkgraaf et al. 2002 DOI: 10.1002/yea.866 Utsugi et al. 2002 DOI: 10.1046/j.1356-9597.2001.00495.x |
| Enzyme name: fks2p UniProt ID: P40989* CAZy family: GT48 Gene name: GSC2 Gene GenBank ID: 852920* | Synthesized dimer: bDGlcp(1-3)bDGlcp Donor (ID 34898): aDGlcp(1-P-P-5)xXnucU Acceptor (ID 17430): -3)bDGlcp(1- Status: direct evidence in vivo
Confirmation methods: expression in E. coli; in vitro (purified protein); mutation; in vitro (membrane preparation); in vitro (crude extract) ID: 295 Notes: Glucan, the major constituent of the spore wall, is synthesized by 1,3-glucan synthase, which is composed of a putative catalytic subunit encoded by FKS1 and FKS2. 1,3-glucan synthase (GS) is composed of a catalytic subunit which is an integral membrane protein encoded by the two closely related genes, Fks1p and Fks2p. Gsc2p is a 1,3-glucan synthase subunit involved in synthesizing an inner spore wall layer | Organism (ID 9927,10761,16585,16870,16879,16880,16881,16882,16883,16884,16885,16886,16891,16896,16906,16913,16917,16921,16922,16923,16924,16925,16926,16927,16928,16929,16930,16931,16932,16933,16934,16935,16936,16937,16938,16939,16940,16941,16942): Saccharomyces cerevisiae SEY6210, YPH499, YPH500, HAB251-15B, HAB915, HAB916, HAB917, HAB918, HAB919, HAB920, HAB921, HAB922, YFF2714-5B, YOC1001, YOC1087, YOC4081, YOC4085, YPH501, YOC4070, YOC4071, YOC4072, YOC4078, YOC4079, YOC4080, YOC4086, YOC4087, YFK532-7C, YFF2714, YFF2714-1A, YFF2714-10B, YFF2716, YFF2957, YFF2986, YFF2975, LH177, KBY259, HAB903, HAB9010, HAB913 Expressed in: E. coli Full structure (ID 4413): Molecule role: cell wall | Dijkgraaf et al. 2002 DOI: 10.1002/yea.866 Ishihara et al. 2007 DOI: 10.1128/EC.00200-06 Inoue et al. 1995 DOI: 10.1111/j.1432-1033.1995.0845d.x Sekiya-Kawasaki et al. 2002 PMID: 12399379 Mazur et al. 1995 DOI: 10.1128/MCB.15.10.5671 |
| Enzyme name: fks3p UniProt ID: Q04952* CAZy family: GT48 Gene name: FKS3 Gene GenBank ID: 855353* | Synthesized dimer: bDGlcp(1-3)bDGlcp Donor (ID 34898): aDGlcp(1-P-P-5)xXnucU Acceptor (ID 17430): -3)bDGlcp(1- Status: direct evidence in vivo
Confirmation methods: Expression in E. coli; in vitro (purified protein); complementation ID: 296 Notes: FKS3 is required for normal spore wall formation because it affects the upstream regulation of 1,3-glucan synthase | Organism (ID 16925,16926,16943,16944,16945,16946): Saccharomyces cerevisiae YOC4078, YOC4079, YOC4061, YOC4114, YOC4115, YOC4116 Full structure (ID 4413): CSDB ID(s): 1076, 2266, 3459, 7266, 7340, 7341, 7344, 7345, 7346, 7371, 7372, 7376, 7378, 7392, 7393, 7995, 9774, 10475, 10476, 10477, 10838, 10929, 11394, 20152, 26584, 27206, 27301, 28382, 29814, 40009, 40030, 40045, 40047, 40446, 40513, 40537, 40836, 40862, 40882, 40895, 40897, 40898, 40900, 40978, 40986, 40988, 41013, 41020, 41170, 41213, 41216, 41221, 41223, 41231, 41233, 41258, 41298, 41329, 41344, 41367, 41370, 41728, 41773, 41829, 41842, 41986, 41987, 41989, 42112, 42138, 42141, 42236, 42239, 42240, 42290, 42294, 42302, 42315, 42324, 42326, 42354, 42355, 42362, 42368, 42374, 42378, 42401, 42448, 42456, 42467, 42470, 42495, 42509, 42512, 42513, 42514, 42647, 42652, 42664, 42667, 42670, 42671, 42672, 42673, 42674, 42681, 42684, 42686, 42688, 42849, 42884, 42991, 43089, 43114, 43163, 43165, 43182, 43185, 43189, 43303, 43323, 43335, 43337, 43356, 43365, 43480, 43554, 43662, 43665, 43666, 43690, 43700, 43701, 43702, 43788, 43948, 43953, 43968, 44081, 44122, 44123, 44271, 44273, 44276, 44388, 44397, 44406, 44475, 44499, 44887, 44909, 44938, 45235, 45261, 45382, 45386, 45401, 45406, 45421, 45425, 45490, 45526, 45527, 45573, 45732, 45734, 45811, 45954, 46045, 46285, 46324, 46337, 46399, 46551, 46556, 46569, 46596, 46625, 47103, 47132, 47144, 47152, 47190, 47304, 47707, 48305, 48371, 48410, 48411, 48472, 48506, 48519, 48553, 48635, 48656, 48659, 48674, 48688, 48717, 48729, 48749, 48751, 48768, 48771, 48796, 48800, 48819, 48821, 49048, 49112, 49256, 49257, 49258, 49266, 49282, 49290, 49874, 49975, 50009, 50035, 50039, 50041, 50085, 50617, 50648, 50654, 50665, 50671, 50818, 50861, 51637, 51641, 51718, 51749, 51776, 51798, 60186, 65932, 67935, 100208, 102752, 103899, 103956, 105065, 105066, 106266, 110076, 110100, 110138, 110149, 111223, 111873, 111972, 111976, 112990, 113036, 114596, 117239, 117639, 117963, 118123, 124665, 125281, 125412, 125817, 125854, 126051, 126111, 130953, 130960, 130963, 131674, 131843, 133021, 138197, 139539, 139820, 139829, 140456, 141508, 142890, 142891, 143678, 143679, 143701, 145246, 145251, 147130, 147173, 147177, 147679, 147988, 149427, 149482, 149869, 149872, 149875, 296737 Molecule role: cell wall | Ishihara et al. 2007 DOI: 10.1128/EC.00200-06 |
| Enzyme name: ugt51p UniProt ID: Q06321* CAZy family: GT1 Gene name: ATG26/UGT51 Gene GenBank ID: 850886* | Synthesized dimer: bDGlcp(1-3)Subst // Subst = cholesterol = SMILES C[C@H](CCCC(C)C)[C@H]1CC[C@@H]2[C@@]1(CC[C@H]3[C@H]2CC=C4[C@@]3(CC{3}[C@@H](C4)O)C)C Donor (ID 34898): aDGlcp(1-P-P-5)xXnucU Acceptor (ID 35268): Subst // Subst = cholesterol = SMILES C[C@H](CCCC(C)C)[C@H]1CC[C@@H]2[C@@]1(CC[C@H]3[C@H]2CC=C4[C@@]3(CC{3}[C@@H](C4)O)C)C Status: semi-direct evidence in vivo
Confirmation methods: mutation; expression in E. coli; in vitro (homogenate); in vitro (membrane preparation); in vitro (recombinant protein) ID: 297 Notes: UGT51 gene encodes UDP-glucose:sterol glucosyltransferase which can use different sterols such as cholesterol, sitosterol, and ergosterol as sugar acceptors | Organism (ID 16947,16948): Saccharomyces cerevisiae UTL-7A, ATCC 204508 Expressed in: E. coli Full structure (ID 13451): CSDB ID(s): 45788, 60936, 64061 Molecule role: membrane glycolipid | Warnecke et al. 1999 DOI: 10.1074/jbc.274.19.13048 Malik et al. 2013 DOI: 10.1039/c3mb70303g |
| Synthesized dimer: bDGlcp(1-3)Subst // Subst = ergosterol = SMILES O{3}[C@@H]4C/C3=C/C=C1\[C@H](CC[C@]2([C@H]1CC[C@@H]2[C@@H](/C=C/[C@H](C)C(C)C)C)C)[C@@]3(C)CC4 Donor (ID 34898): aDGlcp(1-P-P-5)xXnucU Acceptor (ID 35269): Subst // Subst = ergosterol = SMILES O{3}[C@@H]4C/C3=C/C=C1\[C@H](CC[C@]2([C@H]1CC[C@@H]2[C@@H](/C=C/[C@H](C)C(C)C)C)C)[C@@]3(C)CC4 Status: semi-direct evidence in vivo
Confirmation methods: mutation; expression in E. coli; in vitro (homogenate); in vitro (membrane preparation); in vitro (purified protein) ID: 298 Notes: UGT51 gene encodes UDP-glucose:sterol glucosyltransferase which can use different sterols such as cholesterol, sitosterol, and ergosterol as sugar acceptors | Organism (ID 16947,16948): Saccharomyces cerevisiae UTL-7A, ATCC 204508 Expressed in: E. coli Full structure (ID 36175): CSDB ID(s): 41269, 45985, 46036 Molecule role: membrane glycolipid | Warnecke et al. 1999 DOI: 10.1074/jbc.274.19.13048 Malik et al. 2013 DOI: 10.1039/c3mb70303g Cao et al. 2007 DOI: 10.4161/auto.3371 | |
| Synthesized dimer: bDGlcp(1-3)Subst // Subst = β-sitosterol = SMILES O{3}[C@H](C1)CC[C@@]2(C)C1=CC[C@]3([H])[C@@]2([H])CC[C@@]4(C)[C@]3([H])CC[C@]4([C@@H](C)CC[C@@H](CC)C(C)C)[H] Donor (ID 34898): aDGlcp(1-P-P-5)xXnucU Acceptor (ID 36176): Subst // Subst = β-sitosterol = SMILES O{3}[C@H](C1)CC[C@@]2(C)C1=CC[C@]3([H])[C@@]2([H])CC[C@@]4(C)[C@]3([H])CC[C@]4([C@@H](C)CC[C@@H](CC)C(C)C)[H] Status: semi-direct evidence in vivo
Confirmation methods: mutation; expression in E. coli; in vitro (homogenate); in vitro (membrane preparation) ID: 299 Notes: UGT51 gene encodes UDP-glucose:sterol glucosyltransferase which can use different sterols such as cholesterol, sitosterol, and ergosterol as sugar acceptors | Organism (ID 16947): Saccharomyces cerevisiae UTL-7A Expressed in: E. coli Full structure (ID 20055): CSDB ID(s): 42839, 44557, 44558, 44559, 45044, 48154, 48199, 50368, 60932, 61476, 61969, 62123, 62299, 62387, 62464, 62469, 62504, 62746, 62753, 63027, 63214, 63289, 63445, 63676, 63755, 63892, 64042, 64128, 64648, 64665, 64819, 64883, 65044, 65049, 65223, 65264, 65268, 65276, 65365, 65400, 65452, 65589, 66158, 66192, 66656, 66748, 67062, 67301, 67327, 67759, 67799, 67955, 68341, 68586, 68733, 68900, 101110, 101132, 108826, 121975, 121976, 121977, 145377, 147448, 201132, 299859 Molecule role: membrane glycolipid | Warnecke et al. 1999 DOI: 10.1074/jbc.274.19.13048 | |
| Synthesized dimer: bDGlcp(1-3)Subst // Subst = stigmasterol = SMILES CC[C@H](/C=C/[C@@H](C)[C@H]1CC[C@@H]2[C@@]1(CC[C@H]3[C@H]2CC=C4[C@@]3(CC{3}[C@@H](C4)O)C)C)C(C)C Donor (ID 34898): aDGlcp(1-P-P-5)xXnucU Acceptor (ID 35253): Subst // Subst = stigmasterol = SMILES CC[C@H](/C=C/[C@@H](C)[C@H]1CC[C@@H]2[C@@]1(CC[C@H]3[C@H]2CC=C4[C@@]3(CC{3}[C@@H](C4)O)C)C)C(C)C Status: semi-direct evidence in vivo
Confirmation methods: mutation; expression in E. coli; in vitro (homogenate); in vitro (membrane preparation) ID: 300 Notes: UGT51 gene encodes UDP-glucose:sterol glucosyltransferase which can use different sterols as sugar acceptors | Organism (ID 16947): Saccharomyces cerevisiae UTL-7A Expressed in: E. coli Full structure (ID 21489): CSDB ID(s): 49612, 60933, 62647, 62747, 63102, 64012, 64092, 65045, 65250, 65773, 66899, 67265, 67303 Molecule role: membrane glycolipid | ||
| Synthesized dimer: bDGlcp(1-3)Subst // Subst = tomatidine = SMILES C[C@H]1CC[C@@]2(O[C@@]3([H])C[C@@]4([H])[C@]5([H])CC[C@@]6([H])C{3}[C@@H](O)CC[C@]6(C)[C@@]5([H])CC[C@]4(C)C3[C@@H]2C)NC1 Donor (ID 34898): aDGlcp(1-P-P-5)xXnucU Acceptor (ID 36177): Subst // Subst = tomatidine = SMILES C[C@H]1CC[C@@]2(O[C@@]3([H])C[C@@]4([H])[C@]5([H])CC[C@@]6([H])C{3}[C@@H](O)CC[C@]6(C)[C@@]5([H])CC[C@]4(C)C3[C@@H]2C)NC1 Status: semi-direct evidence in vivo
Confirmation methods: mutation; expression in E. coli; in vitro (homogenate); in vitro (membrane preparation) ID: 301 Notes: UGT51 gene encodes UDP-glucose:sterol glucosyltransferase which can use different sterols such as cholesterol, sitosterol, and ergosterol as sugar acceptors | Organism (ID 16947): Saccharomyces cerevisiae UTL-7A Expressed in: E. coli Full structure (ID 36178): Molecule role: membrane glycolipid | ||
| Enzyme name: ugt51p UniProt ID: Q06321 CAZy family: GT1 Gene name: ATG26/UGT51 Gene GenBank ID: 850886 | Synthesized dimer: bDGlcp(1-3)Subst // Subst = testosterol = SMILES C[C@]12CC[C@H]3[C@H]([C@@H]1CC[C@@H]2O)CCC4=C{3}C(O)CC[C@]34C Donor (ID 34898): aDGlcp(1-P-P-5)xXnucU Acceptor (ID 36179): Subst // Subst = testosterol = SMILES C[C@]12CC[C@H]3[C@H]([C@@H]1CC[C@@H]2O)CCC4=C{3}C(O)CC[C@]34C Status: evidence in vitro
Confirmation methods: in vitro (purified protein) ID: 302 Notes: UGT51 gene encodes UDP-glucose:sterol glucosyltransferase which can use different sterols as sugar acceptors | Organism (ID 16948): Saccharomyces cerevisiae ATCC 204508 Full structure (ID 36180): Molecule role: membrane glycolipid | Malik et al. 2013 DOI: 10.1039/c3mb70303g Cao et al. 2007 DOI: 10.4161/auto.3371 |
| Enzyme name: gde1p UniProt ID: Q06625* CAZy family: GH13; GH133 Gene name: GDB1 Gene GenBank ID: 856314* | Synthesized dimer: aDGlcp(1-4)aDGlcp Donor (ID 12376): -4)aDGlcp(1- Acceptor (ID 12376): -4)aDGlcp(1- Status: direct evidence in vivo
Confirmation methods: mutation; in vitro (purified protein); overexpression; in vitro (mutation) ID: 303 Notes: Gde1p is a(1,4)-glucanosyltransferase that catalyzes the transfer of glucan chain from one -a1,4-glucan molecule to another and is known to be able to catalyze a cyclization reaction to produce cycloamylose. GDE cannot transfer glucan to D-glucose or maltose as acceptors. Transferase and glucosidase activities of GDB1 are independent and located at different sites on the polypeptide chain. The purified wild-type enzyme transfers maltosyl and maltotriosyl residues from one Glc5-b-CD to another to form Glc7-, Glc8-b-CD and Glc2-, Glc3-b-CD. | Organism (ID 16949,16950,16951,16952,16953,16954,16955,16956,16957,16958): Saccharomyces cerevisiae KT1112, JF624, JF626, JF784, JF937, D535N, E564Q, D670N, D1086N, D1147N Full structure (ID 1265): CSDB ID(s): 75, 913, 8387, 10122, 10930, 10950, 11299, 12844, 22727, 23469, 23997, 40801, 40803, 40910, 40976, 40987, 41280, 41854, 42475, 43004, 43181, 43670, 45224, 45428, 45692, 47107, 47135, 48302, 49130, 49220, 49221, 49223, 49254, 50051, 50866, 51620, 51649, 51707, 61039, 61122, 65160, 65772, 66436, 102751, 103980, 106369, 108746, 110122, 111645, 111971, 111975, 113048, 137954, 144153, 145284, 146888, 147706, 148587 Molecule role (analog of): glycogen | Teste et al. 2000 DOI: 10.1111/j.1574-6968.2000.tb09410.x Nakayama et al. 2001 DOI: 10.1074/jbc.M102192200 Yanase et al.2002 DOI: 10.1128/AEM.68.9.4233–4239.2002 |
| Enzyme name: glg1p UniProt ID: P36143* CAZy family: GT8 Gene name: GLG1 Gene GenBank ID: 853932* | Synthesized dimer: aDGlcp(1-4)aDGlcp Donor (ID 34898): aDGlcp(1-P-P-5)xXnucU Acceptor (ID 36181): aDGlcp(1-4)bDGlcp(1-1)Dod Status: evidence in vitro
Confirmation methods: mutation; mutation (in recombinant protein); in vitro (recombinant protein); ID: 304 Notes: The self-glucosylating proteins Glg1p and Glg2p are required for glycogen synthesis. Multiple Tyr residues are important for the function of the yeast Glg proteins in vivo. Both Glg1p and Glg2p have transglucosylase activity and can transfer glucose to n-dodecyl b-D-maltoside. | Organism (ID 16959,16960,16961,16962,16963): Saccharomyces cerevisiae EG328–1A, DH3, CC6, CC8, CC9 Full structure (ID 36182): Molecule role (precursor of): glycogen | Mu et al. 1996 DOI: 10.1074/jbc.271.43.26554 Hurley et al. 2005 DOI: 10.1074/jbc.M502344200 |
| Synthesized dimer: aDGlcp(1-7)Tyr Donor (ID 34898): aDGlcp(1-P-P-5)xXnucU Acceptor (ID 36183): PEP(1-2)x?Tyr(1-2)PEP // PEP = protein fragment Status: direct evidence in vivo
Confirmation methods: mutation; in vitro (recombinant protein); in vitro (membrane preparation) ID: 305 Notes: Glg1p and glg2p are the self-glucosylating proteins that act as primers for the elongation reaction catalyzed by glycogen synthase | Organism (ID 16960,16961,16962,16963,16964,16965,16966,16967,16968,16969): Saccharomyces cerevisiae DH3, CC6, CC8, CC9, EG328-1A, CC4, CC7, JC482, JC889-14B, YPB2 Full structure (ID 36184): Molecule role (precursor of): glycogen | Cheng et al. 1995 DOI: 10.1128/MCB.15.12.6632 | |
| Enzyme name: glg2p UniProt ID: P47011* CAZy family: GT8 Gene name: GLG2 Gene GenBank ID: 853304* | Synthesized dimer: aDGlcp(1-4)aDGlcp Donor (ID 34898): aDGlcp(1-P-P-5)xXnucU Acceptor (ID 36181): aDGlcp(1-4)bDGlcp(1-1)Dod Status: evidence in vitro
Confirmation methods: mutation; mutation (in recombinant protein); in vitro (recombinant protein); Expression in E. coli ID: 306 Notes: The self-glucosylating proteins Glg1p and Glg2p are required for glycogen synthesis. Multiple Tyr residues are important for the function of the yeast Glg proteins in vivo. A complete loss of the in vivo function of Glg2p was achieved when the mutant was complemented with a triply mutated Glg2p lacking Tyr230, Tyr232 and the C-terminal Tyr362 | Organism (ID 16959,16960,16961,16962,16963): Saccharomyces cerevisiae EG328–1A, DH3, CC6, CC8, CC9 Expressed in: E. coli Full structure (ID 36182): Molecule role (precursor of): glycogen | Mu et al. 1996 DOI: 10.1074/jbc.271.43.26554 Albrecht et al. 2004 DOI: 10.1111/j.1432-1033.2004.04333.x |
| Synthesized dimer: aDGlcp(1-7)Tyr Donor (ID 34898): aDGlcp(1-P-P-5)xXnucU Acceptor (ID 36183): PEP(1-2)x?Tyr(1-2)PEP // PEP = protein fragment Status: direct evidence in vivo
Confirmation methods: mutation; in vitro (recombinant protein); in vitro (membrane preparation) ID: 307 Notes: Glg1p and glg2p are the self-glucosylating proteins that act as primers for the elongation reaction catalyzed by glycogen synthase | Organism (ID 16960,16961,16962,16963,16964,16965,16966,16967,16968,16969): Saccharomyces cerevisiae DH3, CC6, CC8, CC9, EG328-1A, CC4, CC7, JC482, JC889-14B, YPB2 Full structure (ID 36184): Molecule role (precursor of): glycogen | Cheng et al. 1995 DOI: 10.1128/MCB.15.12.6632 | |
| Enzyme name: glc3p UniProt ID: P32775* CAZy family: CBM48; GH13 Gene name: GLC3 Gene GenBank ID: 856705* | Synthesized dimer: aDGlcp(1-4)aDGlcp Donor (ID 36185): ?DGlcp(1-P Acceptor (ID 12376): -4)aDGlcp(1- Status: direct evidence in vivo
Confirmation methods: mutation; overexpression; in vitro (recombinant protein) ID: 308 Notes: Disruption of GLC3 yielded the glycogen-deficient phenotype. Glc3p ransfers a segment of a (1->4)-alpha-D-glucan chain to a primary hydroxy group in a similar glucan chain. | Organism (ID 16970,16971,16972,16973,16974,16975,16976,16977,16978,16979,16980,16981,16982): Saccharomyces cerevisiae PWO7, YRL32, YRL34, YRL39-1, YRL34-B24, YRL34-B80, 56Q-1D, YRL35, YRL36, YRL40-1, YRL42, YRL43, YRL44 Full structure (ID 1265): CSDB ID(s): 75, 913, 8387, 10122, 10930, 10950, 11299, 12844, 22727, 23469, 23997, 40801, 40803, 40910, 40976, 40987, 41280, 41854, 42475, 43004, 43181, 43670, 45224, 45428, 45692, 47107, 47135, 48302, 49130, 49220, 49221, 49223, 49254, 50051, 50866, 51620, 51649, 51707, 61039, 61122, 65160, 65772, 66436, 102751, 103980, 106369, 108746, 110122, 111645, 111971, 111975, 113048, 137954, 144153, 145284, 146888, 147706, 148587 Molecule role: glycogen | Rowen et al. 1992 DOI: 10.1128/MCB.12.1.22 |
| Enzyme name: gnt1p UniProt ID: Q12096* CAZy family: GT8 Gene name: GNT1 Gene GenBank ID: 854498* | Synthesized dimer: DGlcpN(1-?)DManp Donor (ID 35226): Ac(1-2)?DGlcpN(1-P-P-5)xXnucU Acceptor (ID 36000): aDManp(1-1)Me Status: evidence in vitro
Confirmation methods: in vitro (purified protein) ID: 309 Notes: Gnt1p has GlcNAc-transferase activity in vitro | Organism (ID 9927): Saccharomyces cerevisiae SEY6210 Full structure (ID 36186): CSDB ID(s): 26951 Molecule role (precursor of): N-glycan | Yoko-o et al. 2003 DOI: 10.1093/glycob/cwg063 |
| Synthesized dimer: DGlcpN(1-?)DManp Donor (ID 35226): Ac(1-2)?DGlcpN(1-P-P-5)xXnucU Acceptor (ID 36187): aDManp(1-3)?DManp Status: evidence in vitro
Confirmation methods: in vitro (purified protein) ID: 310 Notes: Gnt1p has GlcNAc-transferase activity in vitro | Organism (ID 9927): Saccharomyces cerevisiae SEY6210 Full structure (ID 36188): Molecule role (precursor of): N-glycan | ||
| Synthesized dimer: DGlcpN(1-?)DManp Donor (ID 35226): Ac(1-2)?DGlcpN(1-P-P-5)xXnucU Acceptor (ID 36003): aDManp(1-2)?DManp Status: evidence in vitro
Confirmation methods: in vitro (purified protein) ID: 311 Notes: Gnt1p has GlcNAc-transferase activity in vitro | Organism (ID 9927): Saccharomyces cerevisiae SEY6210 Full structure (ID 36189): Molecule role (precursor of): N-glycan | ||
| Synthesized dimer: DGlcpN(1-?)DManp Donor (ID 35226): Ac(1-2)?DGlcpN(1-P-P-5)xXnucU Acceptor (ID 36190): aDManp(1-6)?DManp Status: evidence in vitro
Confirmation methods: in vitro (purified protein) ID: 312 Notes: Gnt1p has GlcNAc-transferase activity in vitro | Organism (ID 9927): Saccharomyces cerevisiae SEY6210 Full structure (ID 36191): Molecule role (precursor of): N-glycan | ||
| Synthesized dimer: DGlcpN(1-?)aDManp Donor (ID 35226): Ac(1-2)?DGlcpN(1-P-P-5)xXnucU Acceptor (ID 36192): aDManp(1-2)aDManp(1-2)aDManp(1-3)[aDManp(1-2)aDManp(1-3)[aDManp(1-2)aDManp(1-6)]aDManp(1-6)]bDManp(1-4)[Ac(1-2)]bDGlcpN(1-4)[Ac(1-2)]?DGlcpN Status: evidence in vitro
Confirmation methods: in vitro (purified protein) ID: 313 Notes: Gnt1p has GlcNAc-transferase activity in vitro. The product is assumed. | Organism (ID 9927): Saccharomyces cerevisiae SEY6210 Full structure (ID 36193): Molecule role: N-glycan | Spirig et al. 2005 DOI: 10.1093/glycob/cwj025 Yoko-o et al. 2003 DOI: 10.1093/glycob/cwg063 | |
| Enzyme name: bgl2p UniProt ID: P15703 CAZy family: GH17 Gene name: BGL2 Gene GenBank ID: 853199 | Synthesized dimer: bDGlcp(1-6)bDGlcp Donor (ID 36194): /bDGlcp(1-3)/n=?/bDGlcp Acceptor (ID 36194): /bDGlcp(1-3)/n=?/bDGlcp Status: evidence in vitro
Confirmation methods: in vitro (purified protein) ID: 314 Notes: Bgl2p is a endoglucanase/glucanosyltransferase, which participates in cross-linking or repair of glucan within the cell wall. Purified transferase first forms an activated intermediate from a donor b-1,3 glucan, releasing free disaccharide. The activated intermediate is then transferred. | Organism (ID 16983): Saccharomyces cerevisiae SEY 2101 Full structure (ID 36195): CSDB ID(s): 40426, 41208, 41210, 41287, 44295, 111144, 112939, 140142 Molecule role (precursor of): cell wall | Goldman et al. 1995 DOI: 10.1111/j.1432-1033.1995.tb20399.x Kalebina et al. 2008b DOI: 10.4161/pri.2.2.6645 |
| Enzyme name: alg1p UniProt ID: P16661* CAZy family: GT33 Gene name: ALG1 Gene GenBank ID: 852407* | Synthesized dimer: bDManp(1-4)bDGlcpN Donor (ID 35793): ?DManp(1-P-P-5)xXnucG Acceptor (ID 36517): Ac(1-2)bDGlcpN(1-4)[Ac(1-2)]bDGlcpN(1-P-P-1)Subst // Subst = dolichol Status: indirect evidence in vivo
Confirmation methods: complementation ID: 500 Notes: Human Hmat-1 gene can complement the yeast alg1-1 mutation | Organism (ID 228): Homo sapiens Expressed in: S. cerevisiae Exact full structure is unknown Molecule role (precursor of): N-glycan | Takahashi et al. 2000 DOI: 10.1093/glycob/10.3.321 |
| Enzyme name: gpi2p UniProt ID: P46961* Gene name: GPI2 Gene GenBank ID: 856029* | Synthesized dimer: aDGlcpN(1-6)myoIno Donor (ID 35226): Ac(1-2)?DGlcpN(1-P-P-5)xXnucU Acceptor (ID 36159): LIP(1-2)[LIP(1-3),xXmyoIno(1-P-1)]xDGro Status: indirect evidence in vivo
Confirmation methods: expression in C. albicans ID: 501 Notes: GPI2 encodes for one of the six accessory subunits of the GPI-N-acetylglucosaminyltransferase (GPI-GnT) complex that catalyzes the first step of GPI biosynthesis in S. cerevisiae | Organism (ID 17046): Candida albicans YPH500 Full structure (ID 36160): Molecule role (precursor of): GPI | Yadav et al. 2014 DOI: 10.1007/s10719-014-9536-8 |
| Enzyme name: gel1p UniProt ID: B0XT72 Gene name: GEL1 Gene GenBank ID: 3506970* | Synthesized dimer: bDGlcp(1-3)bDGlcp Donor (ID 17430): -3)bDGlcp(1- Acceptor (ID 17430): -3)bDGlcp(1- Status: direct evidence in vivo
Confirmation methods: in vitro (membrane preparation); complementation; expression in P. pastoris ID: 502 Notes: GEL1 splits internally a 1,3-b-glucan molecule and transfers the newly generated reducing end to the non-reducing end of another 1,3-b-glucan molecule forming a 1,3-b linkage, resulting in the elongation of 1,3-b-glucan chains. Thus, the following reactions occur: 1). E + G(x) -> E-G(y) + G(x-y); 2). E-G(y) + G(x) -> E + G(x+y). | Organism (ID 17047): Aspergillus fumigatus CBS 144.89 Expressed in: P. pastoris Full structure (ID 4413): CSDB ID(s): 1076, 2266, 3459, 7266, 7340, 7341, 7344, 7345, 7346, 7371, 7372, 7376, 7378, 7392, 7393, 7995, 9774, 10475, 10476, 10477, 10838, 10929, 11394, 20152, 26584, 27206, 27301, 28382, 29814, 40009, 40030, 40045, 40047, 40446, 40513, 40537, 40836, 40862, 40882, 40895, 40897, 40898, 40900, 40978, 40986, 40988, 41013, 41020, 41170, 41213, 41216, 41221, 41223, 41231, 41233, 41258, 41298, 41329, 41344, 41367, 41370, 41728, 41773, 41829, 41842, 41986, 41987, 41989, 42112, 42138, 42141, 42236, 42239, 42240, 42290, 42294, 42302, 42315, 42324, 42326, 42354, 42355, 42362, 42368, 42374, 42378, 42401, 42448, 42456, 42467, 42470, 42495, 42509, 42512, 42513, 42514, 42647, 42652, 42664, 42667, 42670, 42671, 42672, 42673, 42674, 42681, 42684, 42686, 42688, 42849, 42884, 42991, 43089, 43114, 43163, 43165, 43182, 43185, 43189, 43303, 43323, 43335, 43337, 43356, 43365, 43480, 43554, 43662, 43665, 43666, 43690, 43700, 43701, 43702, 43788, 43948, 43953, 43968, 44081, 44122, 44123, 44271, 44273, 44276, 44388, 44397, 44406, 44475, 44499, 44887, 44909, 44938, 45235, 45261, 45382, 45386, 45401, 45406, 45421, 45425, 45490, 45526, 45527, 45573, 45732, 45734, 45811, 45954, 46045, 46285, 46324, 46337, 46399, 46551, 46556, 46569, 46596, 46625, 47103, 47132, 47144, 47152, 47190, 47304, 47707, 48305, 48371, 48410, 48411, 48472, 48506, 48519, 48553, 48635, 48656, 48659, 48674, 48688, 48717, 48729, 48749, 48751, 48768, 48771, 48796, 48800, 48819, 48821, 49048, 49112, 49256, 49257, 49258, 49266, 49282, 49290, 49874, 49975, 50009, 50035, 50039, 50041, 50085, 50617, 50648, 50654, 50665, 50671, 50818, 50861, 51637, 51641, 51718, 51749, 51776, 51798, 60186, 65932, 67935, 100208, 102752, 103899, 103956, 105065, 105066, 106266, 110076, 110100, 110138, 110149, 111223, 111873, 111972, 111976, 112990, 113036, 114596, 117239, 117639, 117963, 118123, 124665, 125281, 125412, 125817, 125854, 126051, 126111, 130953, 130960, 130963, 131674, 131843, 133021, 138197, 139539, 139820, 139829, 140456, 141508, 142890, 142891, 143678, 143679, 143701, 145246, 145251, 147130, 147173, 147177, 147679, 147988, 149427, 149482, 149869, 149872, 149875, 296737 Molecule role (precursor of): glycoprotein | Mouyna et al. 2000 DOI: 10.1074/jbc.275.20.14882 Mouyna et al. 1998 DOI: 10.1099/00221287-144-11-3171 |
| Enzyme name: phr1p UniProt ID: P43076* CAZy family: CBM43; GH72 Gene name: PHR1 Gene GenBank ID: 3641108* | Synthesized dimer: bDGlcp(1-3)bDGlcp Donor (ID 17430): -3)bDGlcp(1- Acceptor (ID 17430): -3)bDGlcp(1- Status: direct evidence in vivo
Confirmation methods: complementation;in vitro (membrane preparation); expression in S. cerevisiae ID: 503 Notes: PHR1 splits internally a 1,3-b-glucan molecule and transfers the newly generated reducing end to the non-reducing end of another 1,3-b-glucan molecule forming a 1,3-b linkage, resulting in the elongation of 1,3-b-glucan chains. Thus, the following reactions occur: 1). E + G(x) -> E-G(y) + G(x-y); 2). E-G(y) + G(x) -> E + G(x+y). | Organism (ID 17048): Candida albicans CAF3-1 Full structure (ID 4413): CSDB ID(s): 1076, 2266, 3459, 7266, 7340, 7341, 7344, 7345, 7346, 7371, 7372, 7376, 7378, 7392, 7393, 7995, 9774, 10475, 10476, 10477, 10838, 10929, 11394, 20152, 26584, 27206, 27301, 28382, 29814, 40009, 40030, 40045, 40047, 40446, 40513, 40537, 40836, 40862, 40882, 40895, 40897, 40898, 40900, 40978, 40986, 40988, 41013, 41020, 41170, 41213, 41216, 41221, 41223, 41231, 41233, 41258, 41298, 41329, 41344, 41367, 41370, 41728, 41773, 41829, 41842, 41986, 41987, 41989, 42112, 42138, 42141, 42236, 42239, 42240, 42290, 42294, 42302, 42315, 42324, 42326, 42354, 42355, 42362, 42368, 42374, 42378, 42401, 42448, 42456, 42467, 42470, 42495, 42509, 42512, 42513, 42514, 42647, 42652, 42664, 42667, 42670, 42671, 42672, 42673, 42674, 42681, 42684, 42686, 42688, 42849, 42884, 42991, 43089, 43114, 43163, 43165, 43182, 43185, 43189, 43303, 43323, 43335, 43337, 43356, 43365, 43480, 43554, 43662, 43665, 43666, 43690, 43700, 43701, 43702, 43788, 43948, 43953, 43968, 44081, 44122, 44123, 44271, 44273, 44276, 44388, 44397, 44406, 44475, 44499, 44887, 44909, 44938, 45235, 45261, 45382, 45386, 45401, 45406, 45421, 45425, 45490, 45526, 45527, 45573, 45732, 45734, 45811, 45954, 46045, 46285, 46324, 46337, 46399, 46551, 46556, 46569, 46596, 46625, 47103, 47132, 47144, 47152, 47190, 47304, 47707, 48305, 48371, 48410, 48411, 48472, 48506, 48519, 48553, 48635, 48656, 48659, 48674, 48688, 48717, 48729, 48749, 48751, 48768, 48771, 48796, 48800, 48819, 48821, 49048, 49112, 49256, 49257, 49258, 49266, 49282, 49290, 49874, 49975, 50009, 50035, 50039, 50041, 50085, 50617, 50648, 50654, 50665, 50671, 50818, 50861, 51637, 51641, 51718, 51749, 51776, 51798, 60186, 65932, 67935, 100208, 102752, 103899, 103956, 105065, 105066, 106266, 110076, 110100, 110138, 110149, 111223, 111873, 111972, 111976, 112990, 113036, 114596, 117239, 117639, 117963, 118123, 124665, 125281, 125412, 125817, 125854, 126051, 126111, 130953, 130960, 130963, 131674, 131843, 133021, 138197, 139539, 139820, 139829, 140456, 141508, 142890, 142891, 143678, 143679, 143701, 145246, 145251, 147130, 147173, 147177, 147679, 147988, 149427, 149482, 149869, 149872, 149875, 296737 Molecule role (precursor of): glycoprotein | Mouyna et al. 2000 DOI: 10.1074/jbc.275.20.14882 |
| Enzyme name: phr2p UniProt ID: O13318* CAZy family: CBM43; GH72 Gene name: PHR2 Gene GenBank ID: 3639334* | Synthesized dimer: bDGlcp(1-3)bDGlcp Donor (ID 17430): -3)bDGlcp(1- Acceptor (ID 17430): -3)bDGlcp(1- Status: direct evidence in vivo
Confirmation methods: complementation;in vitro (membrane preparation); expression in S. cerevisiae ID: 504 Notes: PHR2 splits internally a 1,3-b-glucan molecule and transfers the newly generated reducing end to the non-reducing end of another 1,3-b-glucan molecule forming a 1,3-b linkage, resulting in the elongation of 1,3-b-glucan chains. Thus, the following reactions occur: 1). E + G(x) -> E-G(y) + G(x-y); 2). E-G(y) + G(x) -> E + G(x+y). | Organism (ID 17048): Candida albicans CAF3-1 Full structure (ID 4413): CSDB ID(s): 1076, 2266, 3459, 7266, 7340, 7341, 7344, 7345, 7346, 7371, 7372, 7376, 7378, 7392, 7393, 7995, 9774, 10475, 10476, 10477, 10838, 10929, 11394, 20152, 26584, 27206, 27301, 28382, 29814, 40009, 40030, 40045, 40047, 40446, 40513, 40537, 40836, 40862, 40882, 40895, 40897, 40898, 40900, 40978, 40986, 40988, 41013, 41020, 41170, 41213, 41216, 41221, 41223, 41231, 41233, 41258, 41298, 41329, 41344, 41367, 41370, 41728, 41773, 41829, 41842, 41986, 41987, 41989, 42112, 42138, 42141, 42236, 42239, 42240, 42290, 42294, 42302, 42315, 42324, 42326, 42354, 42355, 42362, 42368, 42374, 42378, 42401, 42448, 42456, 42467, 42470, 42495, 42509, 42512, 42513, 42514, 42647, 42652, 42664, 42667, 42670, 42671, 42672, 42673, 42674, 42681, 42684, 42686, 42688, 42849, 42884, 42991, 43089, 43114, 43163, 43165, 43182, 43185, 43189, 43303, 43323, 43335, 43337, 43356, 43365, 43480, 43554, 43662, 43665, 43666, 43690, 43700, 43701, 43702, 43788, 43948, 43953, 43968, 44081, 44122, 44123, 44271, 44273, 44276, 44388, 44397, 44406, 44475, 44499, 44887, 44909, 44938, 45235, 45261, 45382, 45386, 45401, 45406, 45421, 45425, 45490, 45526, 45527, 45573, 45732, 45734, 45811, 45954, 46045, 46285, 46324, 46337, 46399, 46551, 46556, 46569, 46596, 46625, 47103, 47132, 47144, 47152, 47190, 47304, 47707, 48305, 48371, 48410, 48411, 48472, 48506, 48519, 48553, 48635, 48656, 48659, 48674, 48688, 48717, 48729, 48749, 48751, 48768, 48771, 48796, 48800, 48819, 48821, 49048, 49112, 49256, 49257, 49258, 49266, 49282, 49290, 49874, 49975, 50009, 50035, 50039, 50041, 50085, 50617, 50648, 50654, 50665, 50671, 50818, 50861, 51637, 51641, 51718, 51749, 51776, 51798, 60186, 65932, 67935, 100208, 102752, 103899, 103956, 105065, 105066, 106266, 110076, 110100, 110138, 110149, 111223, 111873, 111972, 111976, 112990, 113036, 114596, 117239, 117639, 117963, 118123, 124665, 125281, 125412, 125817, 125854, 126051, 126111, 130953, 130960, 130963, 131674, 131843, 133021, 138197, 139539, 139820, 139829, 140456, 141508, 142890, 142891, 143678, 143679, 143701, 145246, 145251, 147130, 147173, 147177, 147679, 147988, 149427, 149482, 149869, 149872, 149875, 296737 Molecule role (precursor of): glycoprotein | |
| Enzyme name: gma12p UniProt ID: Q09174* CAZy family: GT34 Gene name: GMA12 Gene GenBank ID: 2539101* | Synthesized dimer: DGalp(1-2)aDManp Donor (ID 35793): ?DManp(1-P-P-5)xXnucG Acceptor (ID 36048): aDManp(1-2)aDManp(1-2)Subst // Subst = aminopyridine = SMILES n1cccc{2}c1N Status: evidence in vitro
Confirmation methods: in vitro (membrane preparation) ID: 505 Notes: Two fusion proteins, Pir1-HA-Kre2 and Pir2-FLAGMnn1, were constructed to display two kinds of mannosyltransferases, which are involved in yeast O-linked oligosaccharide synthesis | Organism (ID 17049,17050): Saccharomyces pombe W303-1A, SSY18 Expressed in: S. cerevisiae Full structure (ID 36518): Molecule role: N-glycan,O-glycan | Abe et al. 2003 DOI: 10.1093/glycob/cwg014 |
| Enzyme name: stt3p UniProt ID: Q8U4D2* CAZy family: GT66 Gene name: AGLB1 Gene GenBank ID: PF_RS00795* | Synthesized dimer: DGalpN1N(1-4)Asn Donor (ID 36519): ?DManpN(1-?)?DXyl(1-?)?DXyl(1-?)?DGlcA(1-?)?DManp(1-?)?DManp(1-?)[Ac(1-2)]?DGalpN(1-?)Subst // Subst = dolichol Acceptor (ID 36520): x?Arg(1-2)xXGly(1-2)x?Asn(1-2)x?Ser(1-2)x?Thr(1-2)x?Val(1-2)x?Thr(1-2)x?Arg Status: evidence in vitro
Confirmation methods: in vitro (purified protein) ID: 506 Notes: Pyrococcus furiosus OST is composed of the STT3 protein alone, and catalyzes the transfer of a heptasaccharide, containing one hexouronate and two pentose residues, onto peptides in an Asn-X-Thr/ Ser-motif-dependent manner | Organism (ID 11889): Pyrococcus furiosus Expressed in: E. coli Full structure (ID 36521): Molecule role (precursor of): N-glycan | Igura et al. 2008 DOI: 10.1038/sj.emboj.7601940 |
| Enzyme name: gpi14p UniProt ID: P47088* CAZy family: GT50 Gene name: GPI14 Gene GenBank ID: 853470* | Synthesized dimer: aDManp(1-4)aDGlcpN Donor (ID 35925): ?DManp(1-P-1)Subst // Subst = dolichol Acceptor (ID 36522): LIP(1-2)[LIP(1-3),Ac(1-2)aDGlcpN(1-6)xXmyoIno(1-P-1)]xDGro Status: indirect evidence in vivo
Confirmation methods: mutation (in recombinant protein); expression in S. cerevisiae ID: 507 Notes: Association of PIG-X and PIG-M for GPI-MT-I activity is not interchangeable between mammals and the other lower eukaryotes | Organism (ID 17051): Homo sapiens W303 Expressed in: S. cerevisiae Full structure (ID 36167): Molecule role (precursor of): GPI | Kim et al. 2007b DOI: 10.1093/jb/mvm113 |
| Synthesized dimer: aDManp(1-4)aDGlcpN Donor (ID 35925): ?DManp(1-P-1)Subst // Subst = dolichol Acceptor (ID 36522): LIP(1-2)[LIP(1-3),Ac(1-2)aDGlcpN(1-6)xXmyoIno(1-P-1)]xDGro Status: indirect evidence in vivo
Confirmation methods: mutation (in recombinant protein); expression in S. cerevisiae ID: 508 Notes: Association of PIG-X and PIG-M for GPI-MT-I activity is not interchangeable between mammals and the other lower eukaryotes | Organism (ID 17052): Trypanosoma brucei W303 Expressed in: S. cerevisiae Full structure (ID 36167): Molecule role (precursor of): GPI | ||
| Synthesized dimer: aDManp(1-4)aDGlcpN Donor (ID 35925): ?DManp(1-P-1)Subst // Subst = dolichol Acceptor (ID 36522): LIP(1-2)[LIP(1-3),Ac(1-2)aDGlcpN(1-6)xXmyoIno(1-P-1)]xDGro Status: indirect evidence in vivo
Confirmation methods: mutation (in recombinant protein); expression in S. cerevisiae ID: 509 Notes: Association of PIG-X and PIG-M for GPI-MT-I activity is not interchangeable between mammals and the other lower eukaryotes | Organism (ID 17053): Plasmodium falciparum W303 Expressed in: S. cerevisiae Full structure (ID 36167): Molecule role (precursor of): GPI | ||
| Enzyme name: ugt51p UniProt ID: Q06321* CAZy family: GT1 Gene name: ATG26/UGT51 Gene GenBank ID: 850886* | Synthesized dimer: bDGlcp(1-3)Subst // Subst = cholesterol = SMILES C[C@H](CCCC(C)C)[C@H]1CC[C@@H]2[C@@]1(CC[C@H]3[C@H]2CC=C4[C@@]3(CC{3}[C@@H](C4)O)C)C Donor (ID 34898): aDGlcp(1-P-P-5)xXnucU Acceptor (ID 35268): Subst // Subst = cholesterol = SMILES C[C@H](CCCC(C)C)[C@H]1CC[C@@H]2[C@@]1(CC[C@H]3[C@H]2CC=C4[C@@]3(CC{3}[C@@H](C4)O)C)C Status: semi-direct evidence in vivo
Confirmation methods: mutation; expression in E. coli; in vitro (homogenate); in vitro (membrane preparation) ID: 510 Notes: UGT51 gene encodes UDP-glucose:sterol glucosyltransferase which can use different sterols such as cholesterol, sitosterol, and ergosterol as sugar acceptors | Organism (ID 11989): Avena sativa Expressed in: E. coli Full structure (ID 13451): CSDB ID(s): 45790, 64061 Molecule role: membrane glycolipid | Warnecke et al. 1999 DOI: 10.1074/jbc.274.19.13048 |
| Synthesized dimer: bDGlcp(1-3)Subst // Subst = ergosterol = SMILES O{3}[C@@H]4C/C3=C/C=C1\[C@H](CC[C@]2([C@H]1CC[C@@H]2[C@@H](/C=C/[C@H](C)C(C)C)C)C)[C@@]3(C)CC4 Donor (ID 34898): aDGlcp(1-P-P-5)xXnucU Acceptor (ID 35269): Subst // Subst = ergosterol = SMILES O{3}[C@@H]4C/C3=C/C=C1\[C@H](CC[C@]2([C@H]1CC[C@@H]2[C@@H](/C=C/[C@H](C)C(C)C)C)C)[C@@]3(C)CC4 Status: semi-direct evidence in vivo
Confirmation methods: mutation; expression in E. coli; in vitro (homogenate); in vitro (membrane preparation) ID: 511 Notes: UGT51 gene encodes UDP-glucose:sterol glucosyltransferase which can use different sterols such as cholesterol, sitosterol, and ergosterol as sugar acceptors | Organism (ID 11989): Avena sativa Expressed in: E. coli Full structure (ID 36175): Molecule role: membrane glycolipid | ||
| Synthesized dimer: bDGlcp(1-3)Subst // Subst = β-sitosterol = SMILES O{3}[C@H](C1)CC[C@@]2(C)C1=CC[C@]3([H])[C@@]2([H])CC[C@@]4(C)[C@]3([H])CC[C@]4([C@@H](C)CC[C@@H](CC)C(C)C)[H] Donor (ID 34898): aDGlcp(1-P-P-5)xXnucU Acceptor (ID 36176): Subst // Subst = β-sitosterol = SMILES O{3}[C@H](C1)CC[C@@]2(C)C1=CC[C@]3([H])[C@@]2([H])CC[C@@]4(C)[C@]3([H])CC[C@]4([C@@H](C)CC[C@@H](CC)C(C)C)[H] Status: semi-direct evidence in vivo
Confirmation methods: mutation; expression in E. coli; in vitro (homogenate); in vitro (membrane preparation) ID: 512 Notes: UGT51 gene encodes UDP-glucose:sterol glucosyltransferase which can use different sterols such as cholesterol, sitosterol, and ergosterol as sugar acceptors | Organism (ID 11989): Avena sativa Expressed in: E. coli Full structure (ID 20055): CSDB ID(s): 42839, 45044, 48154, 48199, 50368, 61476, 61969, 62123, 62299, 62387, 62464, 62469, 62504, 62746, 62753, 63027, 63214, 63289, 63445, 63676, 63755, 63892, 64042, 64128, 64648, 64665, 64819, 64883, 65044, 65049, 65223, 65264, 65268, 65276, 65365, 65400, 65452, 65589, 66158, 66192, 66656, 66748, 67062, 67301, 67327, 67759, 67799, 67955, 68341, 68586, 68733, 68900, 290698, 299859 Molecule role: membrane glycolipid | ||
| Synthesized dimer: bDGlcp(1-3)Subst // Subst = stigmasterol = SMILES CC[C@H](/C=C/[C@@H](C)[C@H]1CC[C@@H]2[C@@]1(CC[C@H]3[C@H]2CC=C4[C@@]3(CC{3}[C@@H](C4)O)C)C)C(C)C Donor (ID 34898): aDGlcp(1-P-P-5)xXnucU Acceptor (ID 35253): Subst // Subst = stigmasterol = SMILES CC[C@H](/C=C/[C@@H](C)[C@H]1CC[C@@H]2[C@@]1(CC[C@H]3[C@H]2CC=C4[C@@]3(CC{3}[C@@H](C4)O)C)C)C(C)C Status: semi-direct evidence in vivo
Confirmation methods: mutation; expression in E. coli; in vitro (homogenate); in vitro (membrane preparation) ID: 513 Notes: UGT51 gene encodes UDP-glucose:sterol glucosyltransferase which can use different sterols such as cholesterol, sitosterol, and ergosterol as sugar acceptors | Organism (ID 11989): Avena sativa Expressed in: E. coli Full structure (ID 21489): CSDB ID(s): 49612, 62647, 62747, 63102, 64012, 64092, 65045, 65250, 65773, 66899, 67265, 67303, 299860 Molecule role: membrane glycolipid | ||
| Synthesized dimer: bDGlcp(1-3)Subst // Subst = tomatidine = SMILES C[C@H]1CC[C@@]2(O[C@@]3([H])C[C@@]4([H])[C@]5([H])CC[C@@]6([H])C{3}[C@@H](O)CC[C@]6(C)[C@@]5([H])CC[C@]4(C)C3[C@@H]2C)NC1 Donor (ID 34898): aDGlcp(1-P-P-5)xXnucU Acceptor (ID 36177): Subst // Subst = tomatidine = SMILES C[C@H]1CC[C@@]2(O[C@@]3([H])C[C@@]4([H])[C@]5([H])CC[C@@]6([H])C{3}[C@@H](O)CC[C@]6(C)[C@@]5([H])CC[C@]4(C)C3[C@@H]2C)NC1 Status: semi-direct evidence in vivo
Confirmation methods: mutation; expression in E. coli; in vitro (homogenate); in vitro (membrane preparation) ID: 514 Notes: UGT51 gene encodes UDP-glucose:sterol glucosyltransferase which can use different sterols such as cholesterol, sitosterol, and ergosterol as sugar acceptors | Organism (ID 11989): Avena sativa Expressed in: E. coli Full structure (ID 36178): Molecule role: membrane glycolipid | ||
| Synthesized dimer: bDGlcp(1-3)Subst // Subst = cholesterol = SMILES C[C@H](CCCC(C)C)[C@H]1CC[C@@H]2[C@@]1(CC[C@H]3[C@H]2CC=C4[C@@]3(CC{3}[C@@H](C4)O)C)C Donor (ID 34898): aDGlcp(1-P-P-5)xXnucU Acceptor (ID 35268): Subst // Subst = cholesterol = SMILES C[C@H](CCCC(C)C)[C@H]1CC[C@@H]2[C@@]1(CC[C@H]3[C@H]2CC=C4[C@@]3(CC{3}[C@@H](C4)O)C)C Status: semi-direct evidence in vivo
Confirmation methods: mutation; expression in E. coli; in vitro (homogenate); in vitro (membrane preparation) ID: 515 Notes: UGT51 gene encodes UDP-glucose:sterol glucosyltransferase which can use different sterols such as cholesterol, sitosterol, and ergosterol as sugar acceptors | Organism (ID 9103): Dictyostelium discoideum Expressed in: E. coli Full structure (ID 13451): CSDB ID(s): 45790, 64061 Molecule role: membrane glycolipid | ||
| Synthesized dimer: bDGlcp(1-3)Subst // Subst = ergosterol = SMILES O{3}[C@@H]4C/C3=C/C=C1\[C@H](CC[C@]2([C@H]1CC[C@@H]2[C@@H](/C=C/[C@H](C)C(C)C)C)C)[C@@]3(C)CC4 Donor (ID 34898): aDGlcp(1-P-P-5)xXnucU Acceptor (ID 35269): Subst // Subst = ergosterol = SMILES O{3}[C@@H]4C/C3=C/C=C1\[C@H](CC[C@]2([C@H]1CC[C@@H]2[C@@H](/C=C/[C@H](C)C(C)C)C)C)[C@@]3(C)CC4 Status: semi-direct evidence in vivo
Confirmation methods: mutation; expression in E. coli; in vitro (homogenate); in vitro (membrane preparation) ID: 516 Notes: UGT51 gene encodes UDP-glucose:sterol glucosyltransferase which can use different sterols such as cholesterol, sitosterol, and ergosterol as sugar acceptors | Organism (ID 9103): Dictyostelium discoideum Expressed in: E. coli Full structure (ID 36175): Molecule role: membrane glycolipid | ||
| Synthesized dimer: bDGlcp(1-3)Subst // Subst = β-sitosterol = SMILES O{3}[C@H](C1)CC[C@@]2(C)C1=CC[C@]3([H])[C@@]2([H])CC[C@@]4(C)[C@]3([H])CC[C@]4([C@@H](C)CC[C@@H](CC)C(C)C)[H] Donor (ID 34898): aDGlcp(1-P-P-5)xXnucU Acceptor (ID 36176): Subst // Subst = β-sitosterol = SMILES O{3}[C@H](C1)CC[C@@]2(C)C1=CC[C@]3([H])[C@@]2([H])CC[C@@]4(C)[C@]3([H])CC[C@]4([C@@H](C)CC[C@@H](CC)C(C)C)[H] Status: semi-direct evidence in vivo
Confirmation methods: mutation; expression in E. coli; in vitro (homogenate); in vitro (membrane preparation) ID: 517 Notes: UGT51 gene encodes UDP-glucose:sterol glucosyltransferase which can use different sterols such as cholesterol, sitosterol, and ergosterol as sugar acceptors | Organism (ID 9103): Dictyostelium discoideum Expressed in: E. coli Full structure (ID 20055): CSDB ID(s): 42839, 45044, 48154, 48199, 50368, 61476, 61969, 62123, 62299, 62387, 62464, 62469, 62504, 62746, 62753, 63027, 63214, 63289, 63445, 63676, 63755, 63892, 64042, 64128, 64648, 64665, 64819, 64883, 65044, 65049, 65223, 65264, 65268, 65276, 65365, 65400, 65452, 65589, 66158, 66192, 66656, 66748, 67062, 67301, 67327, 67759, 67799, 67955, 68341, 68586, 68733, 68900, 290698, 299859 Molecule role: membrane glycolipid | ||
| Synthesized dimer: bDGlcp(1-3)Subst // Subst = stigmasterol = SMILES CC[C@H](/C=C/[C@@H](C)[C@H]1CC[C@@H]2[C@@]1(CC[C@H]3[C@H]2CC=C4[C@@]3(CC{3}[C@@H](C4)O)C)C)C(C)C Donor (ID 34898): aDGlcp(1-P-P-5)xXnucU Acceptor (ID 35253): Subst // Subst = stigmasterol = SMILES CC[C@H](/C=C/[C@@H](C)[C@H]1CC[C@@H]2[C@@]1(CC[C@H]3[C@H]2CC=C4[C@@]3(CC{3}[C@@H](C4)O)C)C)C(C)C Status: semi-direct evidence in vivo
Confirmation methods: mutation; expression in E. coli; in vitro (homogenate); in vitro (membrane preparation) ID: 518 Notes: UGT51 gene encodes UDP-glucose:sterol glucosyltransferase which can use different sterols such as cholesterol, sitosterol, and ergosterol as sugar acceptors | Organism (ID 9103): Dictyostelium discoideum Expressed in: E. coli Full structure (ID 21489): CSDB ID(s): 49612, 62647, 62747, 63102, 64012, 64092, 65045, 65250, 65773, 66899, 67265, 67303, 299860 Molecule role: membrane glycolipid | ||
| Synthesized dimer: bDGlcp(1-3)Subst // Subst = tomatidine = SMILES C[C@H]1CC[C@@]2(O[C@@]3([H])C[C@@]4([H])[C@]5([H])CC[C@@]6([H])C{3}[C@@H](O)CC[C@]6(C)[C@@]5([H])CC[C@]4(C)C3[C@@H]2C)NC1 Donor (ID 34898): aDGlcp(1-P-P-5)xXnucU Acceptor (ID 36177): Subst // Subst = tomatidine = SMILES C[C@H]1CC[C@@]2(O[C@@]3([H])C[C@@]4([H])[C@]5([H])CC[C@@]6([H])C{3}[C@@H](O)CC[C@]6(C)[C@@]5([H])CC[C@]4(C)C3[C@@H]2C)NC1 Status: semi-direct evidence in vivo
Confirmation methods: mutation; expression in E. coli; in vitro (homogenate); in vitro (membrane preparation) ID: 519 Notes: UGT51 gene encodes UDP-glucose:sterol glucosyltransferase which can use different sterols such as cholesterol, sitosterol, and ergosterol as sugar acceptors | Organism (ID 9103): Dictyostelium discoideum Expressed in: E. coli Full structure (ID 36178): Molecule role: membrane glycolipid | ||
| Synthesized dimer: bDGlcp(1-3)Subst // Subst = cholesterol = SMILES C[C@H](CCCC(C)C)[C@H]1CC[C@@H]2[C@@]1(CC[C@H]3[C@H]2CC=C4[C@@]3(CC{3}[C@@H](C4)O)C)C Donor (ID 34898): aDGlcp(1-P-P-5)xXnucU Acceptor (ID 35268): Subst // Subst = cholesterol = SMILES C[C@H](CCCC(C)C)[C@H]1CC[C@@H]2[C@@]1(CC[C@H]3[C@H]2CC=C4[C@@]3(CC{3}[C@@H](C4)O)C)C Status: semi-direct evidence in vivo
Confirmation methods: mutation; expression in E. coli; in vitro (homogenate); in vitro (membrane preparation) ID: 520 Notes: UGT51 gene encodes UDP-glucose:sterol glucosyltransferase which can use different sterols such as cholesterol, sitosterol, and ergosterol as sugar acceptors | Organism (ID 10099): Pichia pastoris Expressed in: E. coli Full structure (ID 13451): CSDB ID(s): 45790, 64061 Molecule role: membrane glycolipid | ||
| Synthesized dimer: bDGlcp(1-3)Subst // Subst = ergosterol = SMILES O{3}[C@@H]4C/C3=C/C=C1\[C@H](CC[C@]2([C@H]1CC[C@@H]2[C@@H](/C=C/[C@H](C)C(C)C)C)C)[C@@]3(C)CC4 Donor (ID 34898): aDGlcp(1-P-P-5)xXnucU Acceptor (ID 35269): Subst // Subst = ergosterol = SMILES O{3}[C@@H]4C/C3=C/C=C1\[C@H](CC[C@]2([C@H]1CC[C@@H]2[C@@H](/C=C/[C@H](C)C(C)C)C)C)[C@@]3(C)CC4 Status: semi-direct evidence in vivo
Confirmation methods: mutation; expression in E. coli; in vitro (homogenate); in vitro (membrane preparation) ID: 521 Notes: UGT51 gene encodes UDP-glucose:sterol glucosyltransferase which can use different sterols such as cholesterol, sitosterol, and ergosterol as sugar acceptors | Organism (ID 10099): Pichia pastoris Expressed in: E. coli Full structure (ID 36175): Molecule role: membrane glycolipid | ||
| Synthesized dimer: bDGlcp(1-3)Subst // Subst = β-sitosterol = SMILES O{3}[C@H](C1)CC[C@@]2(C)C1=CC[C@]3([H])[C@@]2([H])CC[C@@]4(C)[C@]3([H])CC[C@]4([C@@H](C)CC[C@@H](CC)C(C)C)[H] Donor (ID 34898): aDGlcp(1-P-P-5)xXnucU Acceptor (ID 36176): Subst // Subst = β-sitosterol = SMILES O{3}[C@H](C1)CC[C@@]2(C)C1=CC[C@]3([H])[C@@]2([H])CC[C@@]4(C)[C@]3([H])CC[C@]4([C@@H](C)CC[C@@H](CC)C(C)C)[H] Status: semi-direct evidence in vivo
Confirmation methods: mutation; expression in E. coli; in vitro (homogenate); in vitro (membrane preparation) ID: 522 Notes: UGT51 gene encodes UDP-glucose:sterol glucosyltransferase which can use different sterols such as cholesterol, sitosterol, and ergosterol as sugar acceptors | Organism (ID 10099): Pichia pastoris Expressed in: E. coli Full structure (ID 20055): CSDB ID(s): 42839, 45044, 48154, 48199, 50368, 61476, 61969, 62123, 62299, 62387, 62464, 62469, 62504, 62746, 62753, 63027, 63214, 63289, 63445, 63676, 63755, 63892, 64042, 64128, 64648, 64665, 64819, 64883, 65044, 65049, 65223, 65264, 65268, 65276, 65365, 65400, 65452, 65589, 66158, 66192, 66656, 66748, 67062, 67301, 67327, 67759, 67799, 67955, 68341, 68586, 68733, 68900, 290698, 299859 Molecule role: membrane glycolipid | ||
| Synthesized dimer: bDGlcp(1-3)Subst // Subst = stigmasterol = SMILES CC[C@H](/C=C/[C@@H](C)[C@H]1CC[C@@H]2[C@@]1(CC[C@H]3[C@H]2CC=C4[C@@]3(CC{3}[C@@H](C4)O)C)C)C(C)C Donor (ID 34898): aDGlcp(1-P-P-5)xXnucU Acceptor (ID 35253): Subst // Subst = stigmasterol = SMILES CC[C@H](/C=C/[C@@H](C)[C@H]1CC[C@@H]2[C@@]1(CC[C@H]3[C@H]2CC=C4[C@@]3(CC{3}[C@@H](C4)O)C)C)C(C)C Status: semi-direct evidence in vivo
Confirmation methods: mutation; expression in E. coli; in vitro (homogenate); in vitro (membrane preparation) ID: 523 Notes: UGT51 gene encodes UDP-glucose:sterol glucosyltransferase which can use different sterols such as cholesterol, sitosterol, and ergosterol as sugar acceptors | Organism (ID 10099): Pichia pastoris Expressed in: E. coli Full structure (ID 21489): CSDB ID(s): 49612, 62647, 62747, 63102, 64012, 64092, 65045, 65250, 65773, 66899, 67265, 67303, 299860 Molecule role: membrane glycolipid | ||
| Synthesized dimer: bDGlcp(1-3)Subst // Subst = tomatidine = SMILES C[C@H]1CC[C@@]2(O[C@@]3([H])C[C@@]4([H])[C@]5([H])CC[C@@]6([H])C{3}[C@@H](O)CC[C@]6(C)[C@@]5([H])CC[C@]4(C)C3[C@@H]2C)NC1 Donor (ID 34898): aDGlcp(1-P-P-5)xXnucU Acceptor (ID 36177): Subst // Subst = tomatidine = SMILES C[C@H]1CC[C@@]2(O[C@@]3([H])C[C@@]4([H])[C@]5([H])CC[C@@]6([H])C{3}[C@@H](O)CC[C@]6(C)[C@@]5([H])CC[C@]4(C)C3[C@@H]2C)NC1 Status: semi-direct evidence in vivo
Confirmation methods: mutation; expression in E. coli; in vitro (homogenate); in vitro (membrane preparation) ID: 524 Notes: UGT51 gene encodes UDP-glucose:sterol glucosyltransferase which can use different sterols such as cholesterol, sitosterol, and ergosterol as sugar acceptors | Organism (ID 10099): Pichia pastoris Expressed in: E. coli Full structure (ID 36178): Molecule role: membrane glycolipid | ||
| Enzyme name: glg1p UniProt ID: P36143* CAZy family: GT8 Gene name: GLG1 Gene GenBank ID: 853932* | Synthesized dimer: aDGlcp(1-4)aDGlcp Donor (ID 34839): ?DGlcp(1-P-P-5)xXnucU Acceptor (ID 35392): aDGlcp(1-4)aDGlcp Status: evidence in vitro
Confirmation methods: in vitro (mutation) ID: 525 Notes: Substitution of aspartate 159 by serine or asparagine eliminated self-glucosylation and reduced trans-glucosylation activity by 260-fold but only reduced UDP-glucose hydrolytic activity by 4–14-fold | Organism (ID 17054,17055,17056,17057): Oryctolagus cuniculus 162S, 162N, 159S, 159N Full structure (ID 20291): CSDB ID(s): 46635, 61041, 65627, 217142 Molecule role (precursor of): glycogen | Hurley et al. 2005 DOI: 10.1074/jbc.M502344200 |
| Enzyme name: glg2p UniProt ID: P47011* CAZy family: GT8 Gene name: GLG2 Gene GenBank ID: 853304* | Synthesized dimer: aDGlcp(1-4)aDGlcp Donor (ID 34839): ?DGlcp(1-P-P-5)xXnucU Acceptor (ID 35392): aDGlcp(1-4)aDGlcp Status: evidence in vitro
Confirmation methods: in vitro (mutation) ID: 526 Notes: Substitution of aspartate 159 by serine or asparagine eliminated self-glucosylation and reduced trans-glucosylation activity by 260-fold but only reduced UDP-glucose hydrolytic activity by 4–14-fold | Organism (ID 17054,17055,17056,17057): Oryctolagus cuniculus 162S, 162N, 159S, 159N Full structure (ID 20291): CSDB ID(s): 46635, 61041, 65627, 217142 Molecule role (precursor of): glycogen | |
| Enzyme name: DPM1 UniProt ID: Q9HGE2* CAZy family: GT2 Gene name: DPM1 Gene GenBank ID: AF102883.1* | Synthesized dimer: DManp(1-?)P Donor (ID 35793): ?DManp(1-P-P-5)xXnucG Acceptor (ID 36054): P-1)Subst // Subst = dolichol Status: evidence in vitro
Confirmation methods: in vitro (membrane preparation) ID: 527 | Organism (ID 10043): Trichoderma reesei Exact full structure is unknown Molecule role: O-glycan | Gryz et al. 2019 DOI: 10.3390/ijms20123043 |
| Enzyme name: Wzy_PSgc11 Enzyme GenBank ID: AHB32510.1 Gene name: wzy | Synthesized dimer: aDGalpN(1-4)bDGalpN Acceptor (ID 36254): -4)[bDGlcp(1-6),Ac(1-2)]bDGalpN(1-3)aDGalp(1-6)bDGalp(1-3)[Ac(1-2)]aDGalpN(1- Status: predicted in silico
Confirmation methods: Sequencing (gene, protein) ID: 600 Notes: PSgc11; name was augmented to make it unique | Organism (ID 17045): Acinetobacter nosocomialis LUH5541 Full structure (ID 2075): CSDB ID(s): 485, 2292, 5846, 6738, 27747, 29556, 30618, 30929 Molecule role: CPS | Hu et al. 2013 DOI: 10.1371/journal.pone.0070329 |
| Enzyme name: WafH_PSgc11 Enzyme GenBank ID: AHB32513.1 Gene name: wafH | Synthesized dimer: bDGalp(1-3)aDGalpN Acceptor (ID 36284): Ac(1-2)aDGalpN Status: predicted in silico
Confirmation methods: Sequencing (gene, protein) ID: 601 Notes: PSgc11; name was augmented to make it unique | Organism (ID 17045): Acinetobacter nosocomialis LUH5541 Full structure (ID 2075): CSDB ID(s): 485, 2292, 5846, 6738, 27747, 29556, 30618, 30929 Molecule role: CPS | |
| Enzyme name: WafG_PSgc11 Enzyme GenBank ID: AHB32512.1 Gene name: wafG | Synthesized dimer: aDGalp(1-6)bDGalp Acceptor (ID 9506): bDGalp(1-3)[Ac(1-2)]aDGalpN Status: predicted in silico
Confirmation methods: Sequencing (gene, protein) ID: 602 Notes: PSgc11; name was augmented to make it unique | Organism (ID 17045): Acinetobacter nosocomialis LUH5541 Full structure (ID 2075): CSDB ID(s): 485, 2292, 5846, 6738, 27747, 29556, 30618, 30929 Molecule role: CPS | |
| Enzyme name: WafF_PSgc11 Enzyme GenBank ID: AHB32511.1 Gene name: wafF | Synthesized dimer: bDGalpN(1-3)aDGalp Acceptor (ID 36509): aDGalp(1-6)bDGalp(1-3)[Ac(1-2)]aDGalpN Status: predicted in silico
Confirmation methods: Sequencing (gene, protein) ID: 603 Notes: PSgc11; name was augmented to make it unique | Organism (ID 17045): Acinetobacter nosocomialis LUH5541 Full structure (ID 2075): CSDB ID(s): 485, 2292, 5846, 6738, 27747, 29556, 30618, 30929 Molecule role: CPS | |
| Enzyme name: WafL Enzyme GenBank ID: AHB32509.1 Gene name: wafL | Synthesized dimer: bDGlcp(1-6)bDGalpN Acceptor (ID 36510): Ac(1-2)bDGalpN(1-3)aDGalp(1-6)bDGalp(1-3)[Ac(1-2)]aDGalpN Status: predicted in silico
Confirmation methods: Sequencing (gene, protein) ID: 604 Notes: PSgc11 | Organism (ID 17045): Acinetobacter nosocomialis LUH5541 Full structure (ID 2075): CSDB ID(s): 485, 2292, 5846, 6738, 27747, 29556, 30618, 30929 Molecule role: CPS | |
| Enzyme name: Wzy_PSgc2 Enzyme GenBank ID: AHB32538.1 Gene name: wzy | Synthesized dimer: bDGalpN(1-4)aDGalp Donor (ID 35669): Ac(1-2)?DGalpN(1-P-P-5)xXnucU Acceptor (ID 36511): -4)[l?3HOBut(1-3)bDFucp3N(1-3)[Ac(1-2)]aDGalpN(1-3)[Ac(1-2)]bDGalpN(1-3)]aDGalp(1-6)bDGalp(1-3)[Ac(1-2)]bDGalpN(1- Status: predicted in silico
Confirmation methods: Sequencing (gene, protein) ID: 605 Notes: gene cluster name: PSgc2; name was augmented to make it unique | Organism (ID 8738): Acinetobacter nosocomialis LUH3483 Full structure (ID 727): CSDB ID(s): 484, 5740, 6757, 27743, 29552 Molecule role: CPS | |
| Enzyme name: WafH_PSgc2 Enzyme GenBank ID: AHB32535.1 CAZy family: 2 Gene name: wafH | Synthesized dimer: bDGalp(1-3)bDGalpN Donor (ID 35273): ?DGalp(1-P-P-5)xXnucU Acceptor (ID 36203): Ac(1-2)bDGalpN Status: predicted in silico
Confirmation methods: Sequencing (gene, protein) ID: 606 Notes: gene cluster name: PSgc2; name was augmented to make it unique | Organism (ID 8738): Acinetobacter nosocomialis LUH3483 Full structure (ID 727): CSDB ID(s): 484, 5740, 6757, 27743, 29552 Molecule role: CPS | |
| Enzyme name: WafG_PSgc2 Enzyme GenBank ID: AHB32536.1 CAZy family: 4 Gene name: wafG | Synthesized dimer: aDGalp(1-6)bDGalp Donor (ID 35273): ?DGalp(1-P-P-5)xXnucU Acceptor (ID 36204): bDGalp(1-3)[Ac(1-2)]bDGalpN Status: predicted in silico
Confirmation methods: Sequencing (gene, protein) ID: 607 Notes: gene cluster name: PSgc2; name was augmented to make it unique | Organism (ID 8738): Acinetobacter nosocomialis LUH3483 Full structure (ID 727): CSDB ID(s): 484, 5740, 6757, 27743, 29552 Molecule role: CPS | |
| Enzyme name: WafF_PSgc2 Enzyme GenBank ID: AHB32537.1 CAZy family: 2 Gene name: wafF | Synthesized dimer: bDGalpN(1-3)aDGalp Donor (ID 35669): Ac(1-2)?DGalpN(1-P-P-5)xXnucU Acceptor (ID 36512): aDGalp(1-6)bDGalp(1-3)[Ac(1-2)]bDGalpN Status: predicted in silico
Confirmation methods: Sequencing (gene, protein) ID: 608 Notes: gene cluster name: PSgc2; name was augmented to make it unique | Organism (ID 8738): Acinetobacter nosocomialis LUH3483 Full structure (ID 727): CSDB ID(s): 484, 5740, 6757, 27743, 29552 Molecule role: CPS | |
| Enzyme name: WafE Enzyme GenBank ID: AHB32539.1 CAZy family: 4 Gene name: wafE | Synthesized dimer: aDGalpN(1-3)bDGalpN Donor (ID 35669): Ac(1-2)?DGalpN(1-P-P-5)xXnucU Acceptor (ID 36513): Ac(1-2)bDGalpN(1-3)aDGalp(1-6)bDGalp(1-3)[Ac(1-2)]bDGalpN Status: predicted in silico
Confirmation methods: Sequencing (gene, protein) ID: 609 Notes: gene cluster name: PSgc2 | Organism (ID 8738): Acinetobacter nosocomialis LUH3483 Full structure (ID 727): CSDB ID(s): 484, 5740, 6757, 27743, 29552 Molecule role: CPS | |
| Enzyme name: WafD Enzyme GenBank ID: AHB32540.1 CAZy family: 2 Gene name: wafD | Synthesized dimer: bDFucp3N(1-3)aDGalpN Donor (ID 36514): lR3HOBut(1-3)?DFucp3N(1-P-P-5)xXnucdT Acceptor (ID 36515): Ac(1-2)aDGalpN(1-3)[Ac(1-2)]bDGalpN(1-3)aDGalp(1-6)bDGalp(1-3)[Ac(1-2)]bDGalpN Status: predicted in silico
Confirmation methods: Sequencing (gene, protein) ID: 610 Notes: gene cluster name: PSgc2 | Organism (ID 8738): Acinetobacter nosocomialis LUH3483 Full structure (ID 727): CSDB ID(s): 484, 5740, 6757, 27743, 29552 Molecule role: CPS | |
| Enzyme name: FdhC UniProt ID: V5RDR9_9GAMM Gene name: fdhC | Synthesized dimer: R3HOBut(1-3)DFucp3N Acceptor (ID 36516): ?DFucp3N(1-P-P-5)xXnucdT Status: predicted in silico
Confirmation methods: Sequencing (gene, protein) ID: 611 | Organism (ID 8738): Acinetobacter nosocomialis LUH3483 Exact full structure is unknown Molecule role: activated monosaccharide | |
| Enzyme name: 71B1 UniProt ID: Q9LSY9.1 CAZy family: GT1 Gene name: UGT71B1 / AT3G21750 Gene GenBank ID: 821729 | Synthesized dimer: DGlcp(1-4)Prcat Donor (ID 34839): ?DGlcp(1-P-P-5)xXnucU Acceptor (ID 34840): xXPrcat // Prcat = 3,4-dihydroxybenzoic (protocatechuic) acid Status: evidence in vitro
Confirmation methods: in vitro (purified protein) ID: 1000 | Organism (ID 12415): Arabidopsis thaliana Full structure (ID 34841): | Lim et al. 2002 DOI: 10.1074/jbc.M109287200 |
| Synthesized dimer: DGlcp(1-4)bRes Donor (ID 34839): ?DGlcp(1-P-P-5)xXnucU Acceptor (ID 34842): xXbRes // bRes = 2,4-dihydroxybenzoic (beta-resorcyclic) acid Status: evidence in vitro
Confirmation methods: in vitro (purified protein) ID: 1001 | Organism (ID 12415): Arabidopsis thaliana Full structure (ID 34843): | ||
| Synthesized dimer: DGlcp(1-5)Gent Donor (ID 34839): ?DGlcp(1-P-P-5)xXnucU Acceptor (ID 34844): xXGent // Gent = 2,5-dihydroxybenzoic (gentisic) acid Status: evidence in vitro
Confirmation methods: in vitro (purified protein) ID: 1002 | Organism (ID 12415): Arabidopsis thaliana Full structure (ID 34845): | ||
| Synthesized dimer: bDGlcp(1-3)Quercetin Donor (ID 34839): ?DGlcp(1-P-P-5)xXnucU Acceptor (ID 34846): xXQuercetin Status: evidence in vitro
Confirmation methods: in vitro (purified protein) ID: 1003 | Organism (ID 12415): Arabidopsis thaliana Full structure (ID 19231): CSDB ID(s): 44612, 46693, 47475, 48669, 48941, 60081, 60203, 60273, 60908, 61152, 61413, 61821, 62231, 63006, 63205, 63329, 63829, 64121, 64673, 64772, 64781, 64887, 64953, 65376, 65396, 65565, 65724, 65828, 65928, 65944, 65954, 65977, 65989, 66185, 66208, 66350, 66379, 66413, 66519, 66554, 66580, 66938, 66944, 67032, 67190, 67294, 67570, 67580, 67607, 67635, 67646, 67720, 67766, 67864, 67926, 67995, 68004, 68170, 68616, 68651, 68741, 68865, 120586, 131302, 139116, 146361, 146591, 146662, 146676, 146799, 270704, 270775 | Lim et al. 2004 DOI: 10.1002/bit.20154 | |
| Synthesized dimer: DGlcp(1-7)Subst // Subst = esculetin Donor (ID 34839): ?DGlcp(1-P-P-5)xXnucU Acceptor (ID 34847): Subst // Subst = esculetin Status: evidence in vitro
Confirmation methods: in vitro (purified protein) ID: 1004 Notes: NC: chichoriin | Organism (ID 12415): Arabidopsis thaliana Full structure (ID 34848): | Lim et al. 2003a DOI: 10.1093/glycob/cwg017 | |
| Synthesized dimer: DGlcp(1-7)Subst // Subst = scopoletin Donor (ID 34839): ?DGlcp(1-P-P-5)xXnucU Acceptor (ID 34849): Subst // Subst = scopoletin Status: evidence in vitro
Confirmation methods: in vitro (purified protein) ID: 1005 Notes: NC: scopolin | Organism (ID 12415): Arabidopsis thaliana Full structure (ID 34850): | ||
| Synthesized dimer: DGlcp(1-1)Subst // Subst = 2,4,5-trichlorophenol Donor (ID 34839): ?DGlcp(1-P-P-5)xXnucU Acceptor (ID 34851): Subst // Subst = 2,4,5-trichlorophenol Status: evidence in vitro
Confirmation methods: in vitro (crude extract) ID: 1006 | Organism (ID 12415): Arabidopsis thaliana Full structure (ID 34852): | Brazier-Hicks et al. 2007 DOI: 10.1073/pnas.0706421104 | |
| Enzyme name: 71B5 UniProt ID: O23382.1 CAZy family: GT1 Gene name: UGT71B5 / AT4G15280 Gene GenBank ID: 827194 | Synthesized dimer: bDGlcp(1-3)Quercetin Donor (ID 34839): ?DGlcp(1-P-P-5)xXnucU Acceptor (ID 34846): xXQuercetin Status: evidence in vitro
Confirmation methods: in vitro (purified protein) ID: 1007 | Organism (ID 12415): Arabidopsis thaliana Full structure (ID 19231): CSDB ID(s): 44612, 46693, 47475, 48669, 48941, 60081, 60203, 60273, 60908, 61152, 61413, 61821, 62231, 63006, 63205, 63329, 63829, 64121, 64673, 64772, 64781, 64887, 64953, 65376, 65396, 65565, 65724, 65828, 65928, 65944, 65954, 65977, 65989, 66185, 66208, 66350, 66379, 66413, 66519, 66554, 66580, 66938, 66944, 67032, 67190, 67294, 67570, 67580, 67607, 67635, 67646, 67720, 67766, 67864, 67926, 67995, 68004, 68170, 68616, 68651, 68741, 68865, 120586, 131302, 139116, 146361, 146591, 146662, 146676, 146799, 270704, 270775 | Lim et al. 2004 DOI: 10.1002/bit.20154 |
| Synthesized dimer: DGlcp(1-7)Subst // Subst = esculetin Donor (ID 34839): ?DGlcp(1-P-P-5)xXnucU Acceptor (ID 34847): Subst // Subst = esculetin Status: evidence in vitro
Confirmation methods: in vitro (purified protein) ID: 1008 Notes: NC: chichoriin | Organism (ID 12415): Arabidopsis thaliana Full structure (ID 34848): | Lim et al. 2003a DOI: 10.1093/glycob/cwg017 | |
| Synthesized dimer: DGlcp(1-7)Subst // Subst = scopoletin Donor (ID 34839): ?DGlcp(1-P-P-5)xXnucU Acceptor (ID 34849): Subst // Subst = scopoletin Status: evidence in vitro
Confirmation methods: in vitro (purified protein) ID: 1009 Notes: NC: scopolin | Organism (ID 12415): Arabidopsis thaliana Full structure (ID 34850): | ||
| Enzyme name: 71B6 UniProt ID: Q9LSY6.1 CAZy family: GT1 Gene name: UGT71B6 / AT3G21780 Gene GenBank ID: 821732 | Synthesized dimer: DGlcp(1-7)Subst // Subst = scopoletin Donor (ID 34839): ?DGlcp(1-P-P-5)xXnucU Acceptor (ID 34849): Subst // Subst = scopoletin Status: evidence in vitro
Confirmation methods: in vitro (purified protein) ID: 1010 Notes: NC: scopolin | Organism (ID 12415): Arabidopsis thaliana Full structure (ID 34850): | |
| Synthesized dimer: DGlcp(1-1)Subst // Subst = (+)-abscisic acid = SMILES CC1=CC(=O)CC({51}[C@]1(/C=C/C(=C\{1}C(=O)O)/C)O)(C)C Donor (ID 34839): ?DGlcp(1-P-P-5)xXnucU Acceptor (ID 34853): Subst // Subst = (+)-abscisic acid = SMILES CC1=CC(=O)CC({51}[C@]1(/C=C/C(=C\{1}C(=O)O)/C)O)(C)C Status: direct evidence in vivo
Confirmation methods: in vitro (purified protein), expression in E.coli (as whole-cell biocatalyst), overexpression ID: 1011 | Organism (ID 12415): Arabidopsis thaliana Expressed in: E. coli Full structure (ID 34854): | Lim et al. 2005a DOI: 10.1016/j.tetasy.2004.11.062 Priest et al. 2006 DOI: 10.1111/j.1365-313X.2006.02701.x Priest et al. 2005 DOI: 10.1016/j.febslet.2005.06.084 | |
| Synthesized dimer: DGlcp(1-1)Subst // Subst = 2,4,5-trichlorophenol Donor (ID 34839): ?DGlcp(1-P-P-5)xXnucU Acceptor (ID 34851): Subst // Subst = 2,4,5-trichlorophenol Status: evidence in vitro
Confirmation methods: in vitro (crude extract) ID: 1012 | Organism (ID 12415): Arabidopsis thaliana Full structure (ID 34852): | Brazier-Hicks et al. 2007 DOI: 10.1073/pnas.0706421104 | |
| Synthesized dimer: DGlcp(1-1)Subst // Subst = 4-chlorothiophenol Donor (ID 34839): ?DGlcp(1-P-P-5)xXnucU Acceptor (ID 34855): Subst // Subst = 4-chlorothiophenol Status: evidence in vitro
Confirmation methods: in vitro (crude extract) ID: 1013 Notes: Low S-conjugating activity towards 4-chlorothiophenol | Organism (ID 12415): Arabidopsis thaliana Full structure (ID 34856): | ||
| Enzyme name: 71B8 UniProt ID: Q9LSY4.1 CAZy family: GT1 Gene name: UGT71B8 / AT3G21800 Gene GenBank ID: 821734 | Synthesized dimer: bDGlcp(1-3)Quercetin Donor (ID 34839): ?DGlcp(1-P-P-5)xXnucU Acceptor (ID 34846): xXQuercetin Status: evidence in vitro
Confirmation methods: in vitro (purified protein) ID: 1014 | Organism (ID 12415): Arabidopsis thaliana Full structure (ID 19231): CSDB ID(s): 44612, 46693, 47475, 48669, 48941, 60081, 60203, 60273, 60908, 61152, 61413, 61821, 62231, 63006, 63205, 63329, 63829, 64121, 64673, 64772, 64781, 64887, 64953, 65376, 65396, 65565, 65724, 65828, 65928, 65944, 65954, 65977, 65989, 66185, 66208, 66350, 66379, 66413, 66519, 66554, 66580, 66938, 66944, 67032, 67190, 67294, 67570, 67580, 67607, 67635, 67646, 67720, 67766, 67864, 67926, 67995, 68004, 68170, 68616, 68651, 68741, 68865, 120586, 131302, 139116, 146361, 146591, 146662, 146676, 146799, 270704, 270775 | Lim et al. 2004 DOI: 10.1002/bit.20154 |
| Synthesized dimer: bDGlcp(1-4')Quercetin Donor (ID 34839): ?DGlcp(1-P-P-5)xXnucU Acceptor (ID 34846): xXQuercetin Status: evidence in vitro
Confirmation methods: in vitro (purified protein) ID: 1015 | Organism (ID 12415): Arabidopsis thaliana Full structure (ID 30998): CSDB ID(s): 61413, 65566, 65821, 66939, 67765, 67950, 68408, 68428, 68617, 68745 | ||
| Synthesized dimer: DGlcp(1-7)Subst // Subst = esculetin Donor (ID 34839): ?DGlcp(1-P-P-5)xXnucU Acceptor (ID 34847): Subst // Subst = esculetin Status: evidence in vitro
Confirmation methods: in vitro (purified protein) ID: 1016 Notes: NC: chichoriin | Organism (ID 12415): Arabidopsis thaliana Full structure (ID 34848): | Lim et al. 2003a DOI: 10.1093/glycob/cwg017 | |
| Synthesized dimer: DGlcp(1-7)Subst // Subst = scopoletin Donor (ID 34839): ?DGlcp(1-P-P-5)xXnucU Acceptor (ID 34849): Subst // Subst = scopoletin Status: evidence in vitro
Confirmation methods: in vitro (purified protein) ID: 1017 Notes: NC: scopolin | Organism (ID 12415): Arabidopsis thaliana Full structure (ID 34850): | ||
| Enzyme name: 71C1 UniProt ID: O82381.1 CAZy family: GT1 Gene name: UGT71C1 / At2g29750 Gene GenBank ID: 817525 | Synthesized dimer: DGlcp(1-4)Prcat Donor (ID 34839): ?DGlcp(1-P-P-5)xXnucU Acceptor (ID 34840): xXPrcat // Prcat = 3,4-dihydroxybenzoic (protocatechuic) acid Status: evidence in vitro
Confirmation methods: in vitro (purified protein) ID: 1018 | Organism (ID 12415): Arabidopsis thaliana Organ/tissue: flower, seedling, stem, root Full structure (ID 34841): | Lim et al. 2002 DOI: 10.1074/jbc.M109287200 Lim et al. 2008 PMID: 18443422 |
| Synthesized dimer: bDGlcp(1-7)Quercetin Donor (ID 34839): ?DGlcp(1-P-P-5)xXnucU Acceptor (ID 34846): xXQuercetin Status: evidence in vitro
Confirmation methods: in vitro (purified protein), expression in E.coli (as whole-cell biocatalyst) ID: 1019 | Organism (ID 12415): Arabidopsis thaliana Expressed in: E. coli; flower, seedling, stem, root Full structure (ID 20812): CSDB ID(s): 48671, 48907, 62907, 65980 | Lim et al. 2004 DOI: 10.1002/bit.20154 Lim et al. 2008 PMID: 18443422 Lim et al. 2003b DOI: 10.1042/bj20021453 | |
| Synthesized dimer: bDGlcp(1-3')Quercetin Donor (ID 34839): ?DGlcp(1-P-P-5)xXnucU Acceptor (ID 34846): xXQuercetin Status: evidence in vitro
Confirmation methods: in vitro (purified protein), expression in E.coli (as whole-cell biocatalyst) ID: 1020 | Organism (ID 12415): Arabidopsis thaliana Expressed in: E. coli; flower, seedling, stem, root Full structure (ID 34857): | ||
| Synthesized dimer: bDGlcp(1-7)Quercetin Donor (ID 34839): ?DGlcp(1-P-P-5)xXnucU Acceptor (ID 34858): bDGlcp(1-3')xXQuercetin Status: evidence in vitro
Confirmation methods: in vitro (purified protein), expression in E.coli (as whole-cell biocatalyst) ID: 1021 Notes: 71C1 can produce quercetin 7,3'-di-O-glucoside; the order of the glucose addition is ambiguous. | Organism (ID 12415): Arabidopsis thaliana Expressed in: E. coli; flower, seedling, stem, root Full structure (ID 34859): | ||
| Synthesized dimer: bDGlcp(1-3')Quercetin Donor (ID 34839): ?DGlcp(1-P-P-5)xXnucU Acceptor (ID 34860): bDGlcp(1-7)xXQuercetin Status: evidence in vitro
Confirmation methods: in vitro (purified protein), expression in E.coli (as whole-cell biocatalyst) ID: 1022 Notes: 71C1 can produce quercetin 7,3'-di-O-glucoside; the order of the glucose addition is ambiguous. | Organism (ID 12415): Arabidopsis thaliana Expressed in: E. coli; flower, seedling, stem, root Full structure (ID 34859): | ||
| Synthesized dimer: DGlcp(1-7)Subst // Subst = esculetin Donor (ID 34839): ?DGlcp(1-P-P-5)xXnucU Acceptor (ID 34847): Subst // Subst = esculetin Status: evidence in vitro
Confirmation methods: in vitro (purified protein) ID: 1023 Notes: NC: chichoriin | Organism (ID 12415): Arabidopsis thaliana Organ/tissue: flower, seedling, stem, root Full structure (ID 34848): | Lim et al. 2003a DOI: 10.1093/glycob/cwg017 Lim et al. 2008 PMID: 18443422 | |
| Synthesized dimer: DGlcp(1-7)Subst // Subst = scopoletin Donor (ID 34839): ?DGlcp(1-P-P-5)xXnucU Acceptor (ID 34849): Subst // Subst = scopoletin Status: evidence in vitro
Confirmation methods: in vitro (purified protein) ID: 1024 Notes: NC: scopolin | Organism (ID 12415): Arabidopsis thaliana Organ/tissue: flower, seedling, stem, root Full structure (ID 34850): | ||
| Synthesized dimer: DGlcp(1-3)Caf Donor (ID 34839): ?DGlcp(1-P-P-5)xXnucU Acceptor (ID 34861): xXCaf? Status: direct evidence in vivo
Confirmation methods: in vitro (purified protein), in vitro (crude extracts from overexpressing plants), overexpression ID: 1025 | Organism (ID 12415): Arabidopsis thaliana Organ/tissue: flower, seedling, stem, root Full structure (ID 34862): | Lim et al. 2008 PMID: 18443422 Lim et al. 2003b DOI: 10.1042/bj20021453 | |
| Synthesized dimer: DGlcp(1-2)oCoum Donor (ID 34839): ?DGlcp(1-P-P-5)xXnucU Acceptor (ID 34863): xXoCoum Status: evidence in vitro
Confirmation methods: in vitro (purified protein) ID: 1026 | Organism (ID 12415): Arabidopsis thaliana Organ/tissue: flower, seedling, stem, root Full structure (ID 34864): | ||
| Synthesized dimer: DGlcp(1-3)mCoum Donor (ID 34839): ?DGlcp(1-P-P-5)xXnucU Acceptor (ID 34865): xXmCoum Status: evidence in vitro
Confirmation methods: in vitro (purified protein) ID: 1027 | Organism (ID 12415): Arabidopsis thaliana Organ/tissue: flower, seedling, stem, root Full structure (ID 34866): | ||
| Synthesized dimer: DGlcp(1-9)Fer Donor (ID 34839): ?DGlcp(1-P-P-5)xXnucU Acceptor (ID 34867): xXFer? Status: evidence in vitro
Confirmation methods: expression in E.coli (as whole-cell biocatalyst) ID: 1028 | Organism (ID 12415): Arabidopsis thaliana Expressed in: E. coli Full structure (ID 34868): | Han et al. 2016 DOI: 10.1007/s13765-016-0186-3 | |
| Synthesized dimer: DGlcp(1-3)Subst // Subst = isoferulic acid Donor (ID 34839): ?DGlcp(1-P-P-5)xXnucU Acceptor (ID 34869): Subst // Subst = isoferulic acid Status: evidence in vitro
Confirmation methods: in vitro (purified protein) ID: 1029 | Organism (ID 12415): Arabidopsis thaliana Organ/tissue: flower, seedling, stem, root Full structure (ID 34870): | Lim et al. 2008 PMID: 18443422 Lim et al. 2003b DOI: 10.1042/bj20021453 | |
| Synthesized dimer: DGlcp(1-?)Luteolin Donor (ID 34839): ?DGlcp(1-P-P-5)xXnucU Acceptor (ID 34871): xXLuteolin Status: evidence in vitro
Confirmation methods: in vitro (purified protein) ID: 1030 | Organism (ID 12415): Arabidopsis thaliana Organ/tissue: flower, seedling, stem, root Full structure (ID 26495): CSDB ID(s): 145285 | ||
| Synthesized dimer: bDGlcp(1-8')Subst // Subst = curcumin = SMILES COC1=CC(/C=C/C(CC(/C=C/C2=CC={8}C(C(OC)=C2)O)=O)=O)=CC={58}C1O Donor (ID 34839): ?DGlcp(1-P-P-5)xXnucU Acceptor (ID 34872): Subst // Subst = curcumin = SMILES COC1=CC(/C=C/C(CC(/C=C/C2=CC={8}C(C(OC)=C2)O)=O)=O)=CC={58}C1O Status: evidence in vitro
Confirmation methods: in vitro (purified protein) ID: 1031 | Organism (ID 12415): Arabidopsis thaliana Organ/tissue: flower, seedling, stem, root Full structure (ID 34873): | Lim et al. 2008 PMID: 18443422 Hansen et al. 2009 DOI: 10.1016/j.phytochem.2009.01.013 | |
| Synthesized dimer: bDGlcp(1-4)Subst // Subst = vanilin Donor (ID 34839): ?DGlcp(1-P-P-5)xXnucU Acceptor (ID 34874): Subst // Subst = vanilin Status: evidence in vitro
Confirmation methods: in vitro (purified protein) ID: 1032 | Organism (ID 12415): Arabidopsis thaliana Organ/tissue: flower, seedling, stem, root Full structure (ID 34875): | ||
| Synthesized dimer: bDGlcp(1-3)Subst // Subst = trans-resveratrol Donor (ID 34839): ?DGlcp(1-P-P-5)xXnucU Acceptor (ID 34876): Subst // Subst = trans-resveratrol Status: evidence in vitro
Confirmation methods: in vitro (purified protein) ID: 1033 | Organism (ID 12415): Arabidopsis thaliana Organ/tissue: flower, seedling, stem, root Full structure (ID 34877): | ||
| Synthesized dimer: bDGlcp(1-4')Subst // Subst = trans-resveratrol Donor (ID 34839): ?DGlcp(1-P-P-5)xXnucU Acceptor (ID 34876): Subst // Subst = trans-resveratrol Status: evidence in vitro
Confirmation methods: in vitro (purified protein) ID: 1034 | Organism (ID 12415): Arabidopsis thaliana Organ/tissue: flower, seedling, stem, root Full structure (ID 34878): | ||
| Synthesized dimer: bDGlcp(1-4')Subst // Subst = etoposide Donor (ID 34839): ?DGlcp(1-P-P-5)xXnucU Acceptor (ID 34879): Subst // Subst = etoposide Status: evidence in vitro
Confirmation methods: in vitro (purified protein) ID: 1035 | Organism (ID 12415): Arabidopsis thaliana Organ/tissue: flower, seedling, stem, root Full structure (ID 34880): | ||
| Synthesized dimer: DGlcp(1-?)Subst // Subst = eugenol = SMILES COC1=CC(CC=C)=CC={1}C1O Donor (ID 34839): ?DGlcp(1-P-P-5)xXnucU Acceptor (ID 34881): Subst // Subst = eugenol = SMILES COC1=CC(CC=C)=CC={1}C1O Status: evidence in vitro
Confirmation methods: in vitro (purified protein) ID: 1036 | Organism (ID 12415): Arabidopsis thaliana Organ/tissue: flower, seedling, stem, root Full structure (ID 34882): | ||
| Synthesized dimer: DGlcp(1-1)Subst // Subst = 2,4,5-trichlorophenol Donor (ID 34839): ?DGlcp(1-P-P-5)xXnucU Acceptor (ID 34851): Subst // Subst = 2,4,5-trichlorophenol Status: evidence in vitro
Confirmation methods: in vitro (purified protein), in vitro (crude extract) ID: 1037 | Organism (ID 12415): Arabidopsis thaliana Organ/tissue: flower, seedling, stem, root Full structure (ID 34852): | Brazier-Hicks et al. 2007 DOI: 10.1073/pnas.0706421104 Lim et al. 2008 PMID: 18443422 Hansen et al. 2009 DOI: 10.1016/j.phytochem.2009.01.013 | |
| Synthesized dimer: bDGlcp(1-4')Subst // Subst = pinoresinol = SMILES O{54}C1=C(OC)C=C(C2C3COC(C4=CC(OC)={104}C(O)C=C4)C3CO2)C=C1 Donor (ID 34839): ?DGlcp(1-P-P-5)xXnucU Acceptor (ID 34883): Subst // Subst = pinoresinol = SMILES O{54}C1=C(OC)C=C(C2C3COC(C4=CC(OC)={104}C(O)C=C4)C3CO2)C=C1 Status: direct evidence in vivo
Confirmation methods: in vitro (crude extract), mutation ID: 1038 | Organism (ID 12415): Arabidopsis thaliana Organ/tissue: flower, seedling, stem, root Full structure (ID 20410): CSDB ID(s): 48008, 49046, 49715 | Lim et al. 2008 PMID: 18443422 Okazawa et al. 2014 DOI: 10.5511/plantbiotechnology.14.0910a | |
| Synthesized dimer: bDGlcp(1-4')Subst // Subst = lariciresinol = SMILES O{54}C1=C(OC)C=C(C2C(C(CO2)([H])CC3=CC(OC)={104}C(O)C=C3)([H])CO)C=C1 Donor (ID 34839): ?DGlcp(1-P-P-5)xXnucU Acceptor (ID 34884): Subst // Subst = lariciresinol = SMILES O{54}C1=C(OC)C=C(C2C(C(CO2)([H])CC3=CC(OC)={104}C(O)C=C3)([H])CO)C=C1 Status: direct evidence in vivo
Confirmation methods: in vitro (crude extract), mutation ID: 1039 Notes: There are two glucoside forms of lariciresinol, lariciresinol-4''-O-β-D-glucoside and lariciresinol-4'-O-β-D-glucoside. | Organism (ID 12415): Arabidopsis thaliana Organ/tissue: flower, seedling, stem, root Full structure (ID 27550): CSDB ID(s): 60803, 61341, 62041, 62165 | ||
| Synthesized dimer: DGlcp(1-1)Subst // Subst = 4-chlorothiophenol Donor (ID 34839): ?DGlcp(1-P-P-5)xXnucU Acceptor (ID 34855): Subst // Subst = 4-chlorothiophenol Status: evidence in vitro
Confirmation methods: in vitro (crude extract) ID: 1040 Notes: S-conjugating activity towards 4-chlorothiophenol | Organism (ID 12415): Arabidopsis thaliana Full structure (ID 34856): | Brazier-Hicks et al. 2007 DOI: 10.1073/pnas.0706421104 | |
| Enzyme name: 71C2 UniProt ID: O82382.1 CAZy family: GT1 Gene name: UGT71C2 / AT2G29740 Gene GenBank ID: 817524 | Synthesized dimer: bDGlcp(1-7)Quercetin Donor (ID 34839): ?DGlcp(1-P-P-5)xXnucU Acceptor (ID 34846): xXQuercetin Status: evidence in vitro
Confirmation methods: in vitro (purified protein) ID: 1041 | Organism (ID 12415): Arabidopsis thaliana Full structure (ID 20812): CSDB ID(s): 48671, 48907, 62907, 65980 | Lim et al. 2004 DOI: 10.1002/bit.20154 |
| Synthesized dimer: bDGlcp(1-3)Quercetin Donor (ID 34839): ?DGlcp(1-P-P-5)xXnucU Acceptor (ID 34846): xXQuercetin Status: evidence in vitro
Confirmation methods: in vitro (purified protein) ID: 1042 | Organism (ID 12415): Arabidopsis thaliana Full structure (ID 19231): CSDB ID(s): 44612, 46693, 47475, 48669, 48941, 60081, 60203, 60273, 60908, 61152, 61413, 61821, 62231, 63006, 63205, 63329, 63829, 64121, 64673, 64772, 64781, 64887, 64953, 65376, 65396, 65565, 65724, 65828, 65928, 65944, 65954, 65977, 65989, 66185, 66208, 66350, 66379, 66413, 66519, 66554, 66580, 66938, 66944, 67032, 67190, 67294, 67570, 67580, 67607, 67635, 67646, 67720, 67766, 67864, 67926, 67995, 68004, 68170, 68616, 68651, 68741, 68865, 120586, 131302, 139116, 146361, 146591, 146662, 146676, 146799, 270704, 270775 | ||
| Synthesized dimer: bDGlcp(1-3')Quercetin Donor (ID 34839): ?DGlcp(1-P-P-5)xXnucU Acceptor (ID 34846): xXQuercetin Status: evidence in vitro
Confirmation methods: in vitro (purified protein) ID: 1043 | Organism (ID 12415): Arabidopsis thaliana Full structure (ID 34857): | ||
| Synthesized dimer: DGlcp(1-7)Subst // Subst = esculetin Donor (ID 34839): ?DGlcp(1-P-P-5)xXnucU Acceptor (ID 34847): Subst // Subst = esculetin Status: evidence in vitro
Confirmation methods: in vitro (purified protein) ID: 1044 Notes: NC: chichoriin | Organism (ID 12415): Arabidopsis thaliana Full structure (ID 34848): | Lim et al. 2003a DOI: 10.1093/glycob/cwg017 | |
| Synthesized dimer: DGlcp(1-7)Subst // Subst = scopoletin Donor (ID 34839): ?DGlcp(1-P-P-5)xXnucU Acceptor (ID 34849): Subst // Subst = scopoletin Status: evidence in vitro
Confirmation methods: in vitro (purified protein) ID: 1045 Notes: NC: scopolin | Organism (ID 12415): Arabidopsis thaliana Full structure (ID 34850): | ||
| Synthesized dimer: bDGlcp(1-8')Subst // Subst = curcumin = SMILES COC1=CC(/C=C/C(CC(/C=C/C2=CC={8}C(C(OC)=C2)O)=O)=O)=CC={58}C1O Donor (ID 34839): ?DGlcp(1-P-P-5)xXnucU Acceptor (ID 34872): Subst // Subst = curcumin = SMILES COC1=CC(/C=C/C(CC(/C=C/C2=CC={8}C(C(OC)=C2)O)=O)=O)=CC={58}C1O Status: evidence in vitro
Confirmation methods: in vitro (purified protein) ID: 1046 | Organism (ID 12415): Arabidopsis thaliana Full structure (ID 34873): | Hansen et al. 2009 DOI: 10.1016/j.phytochem.2009.01.013 | |
| Synthesized dimer: bDGlcp(1-4)Subst // Subst = vanilin Donor (ID 34839): ?DGlcp(1-P-P-5)xXnucU Acceptor (ID 34874): Subst // Subst = vanilin Status: evidence in vitro
Confirmation methods: in vitro (purified protein) ID: 1047 | Organism (ID 12415): Arabidopsis thaliana Full structure (ID 34875): | ||
| Synthesized dimer: bDGlcp(1-4')Subst // Subst = etoposide Donor (ID 34839): ?DGlcp(1-P-P-5)xXnucU Acceptor (ID 34879): Subst // Subst = etoposide Status: evidence in vitro
Confirmation methods: in vitro (purified protein) ID: 1048 | Organism (ID 12415): Arabidopsis thaliana Full structure (ID 34880): | ||
| Synthesized dimer: DGlcp(1-?)Subst // Subst = eugenol = SMILES COC1=CC(CC=C)=CC={1}C1O Donor (ID 34839): ?DGlcp(1-P-P-5)xXnucU Acceptor (ID 34881): Subst // Subst = eugenol = SMILES COC1=CC(CC=C)=CC={1}C1O Status: evidence in vitro
Confirmation methods: in vitro (purified protein) ID: 1049 | Organism (ID 12415): Arabidopsis thaliana Full structure (ID 34882): | ||
| Synthesized dimer: DGlcp(1-?)Subst // Subst = 2,4,5-trichlorophenol Donor (ID 34839): ?DGlcp(1-P-P-5)xXnucU Acceptor (ID 34851): Subst // Subst = 2,4,5-trichlorophenol Status: evidence in vitro
Confirmation methods: in vitro (purified protein), in vitro (crude extract) ID: 1050 | Organism (ID 12415): Arabidopsis thaliana Full structure (ID 34885): | Brazier-Hicks et al. 2007 DOI: 10.1073/pnas.0706421104 Hansen et al. 2009 DOI: 10.1016/j.phytochem.2009.01.013 | |
| Synthesized dimer: DGlcp(1-1)Subst // Subst = 3,4-dichloroaniline Donor (ID 34839): ?DGlcp(1-P-P-5)xXnucU Acceptor (ID 34886): Subst // Subst = 3,4-dichloroaniline Status: evidence in vitro
Confirmation methods: in vitro (crude extract) ID: 1051 Notes: Low N-conjugating activity towards 3,4-dichloroaniline | Organism (ID 12415): Arabidopsis thaliana Full structure (ID 34887): | Brazier-Hicks et al. 2007 DOI: 10.1073/pnas.0706421104 | |
| Synthesized dimer: DGlcp(1-1)Subst // Subst = 4-chlorothiophenol Donor (ID 34839): ?DGlcp(1-P-P-5)xXnucU Acceptor (ID 34855): Subst // Subst = 4-chlorothiophenol Status: evidence in vitro
Confirmation methods: in vitro (crude extract) ID: 1052 Notes: Low S-conjugating activity towards 4-chlorothiophenol | Organism (ID 12415): Arabidopsis thaliana Full structure (ID 34856): | ||
| Synthesized dimer: bDGlcp(1-3)Subst // Subst = trans-resveratrol Donor (ID 34839): ?DGlcp(1-P-P-5)xXnucU Acceptor (ID 34876): Subst // Subst = trans-resveratrol Status: evidence in vitro
Confirmation methods: in vitro (purified protein) ID: 1053 | Organism (ID 12415): Arabidopsis thaliana Full structure (ID 34877): | Hansen et al. 2009 DOI: 10.1016/j.phytochem.2009.01.013 | |
| Enzyme name: 71C3 UniProt ID: Q9LML7.1 CAZy family: GT1 Gene name: UGT71C3 / AT1G07260 Gene GenBank ID: 837237 | Synthesized dimer: bDGlcp(1-3)Quercetin Donor (ID 34839): ?DGlcp(1-P-P-5)xXnucU Acceptor (ID 34846): xXQuercetin Status: evidence in vitro
Confirmation methods: in vitro (purified protein) ID: 1054 | Organism (ID 12415): Arabidopsis thaliana Full structure (ID 19231): CSDB ID(s): 44612, 46693, 47475, 48669, 48941, 60081, 60203, 60273, 60908, 61152, 61413, 61821, 62231, 63006, 63205, 63329, 63829, 64121, 64673, 64772, 64781, 64887, 64953, 65376, 65396, 65565, 65724, 65828, 65928, 65944, 65954, 65977, 65989, 66185, 66208, 66350, 66379, 66413, 66519, 66554, 66580, 66938, 66944, 67032, 67190, 67294, 67570, 67580, 67607, 67635, 67646, 67720, 67766, 67864, 67926, 67995, 68004, 68170, 68616, 68651, 68741, 68865, 120586, 131302, 139116, 146361, 146591, 146662, 146676, 146799, 270704, 270775 | Lim et al. 2004 DOI: 10.1002/bit.20154 |
| Synthesized dimer: DGlcp(1-7)Subst // Subst = esculetin Donor (ID 34839): ?DGlcp(1-P-P-5)xXnucU Acceptor (ID 34847): Subst // Subst = esculetin Status: evidence in vitro
Confirmation methods: in vitro (purified protein) ID: 1055 Notes: NC: chichoriin | Organism (ID 12415): Arabidopsis thaliana Full structure (ID 34848): | Lim et al. 2003a DOI: 10.1093/glycob/cwg017 | |
| Synthesized dimer: DGlcp(1-7)Subst // Subst = scopoletin Donor (ID 34839): ?DGlcp(1-P-P-5)xXnucU Acceptor (ID 34849): Subst // Subst = scopoletin Status: evidence in vitro
Confirmation methods: in vitro (purified protein) ID: 1056 Notes: NC: scopolin | Organism (ID 12415): Arabidopsis thaliana Full structure (ID 34850): | ||
| Synthesized dimer: DGlcp(1-1)Subst // Subst = 2,4,5-trichlorophenol Donor (ID 34839): ?DGlcp(1-P-P-5)xXnucU Acceptor (ID 34851): Subst // Subst = 2,4,5-trichlorophenol Status: evidence in vitro
Confirmation methods: in vitro (crude extract) ID: 1057 | Organism (ID 12415): Arabidopsis thaliana Full structure (ID 34852): | Brazier-Hicks et al. 2007 DOI: 10.1073/pnas.0706421104 | |
| Synthesized dimer: DGlcp(1-1)Subst // Subst = 3,4-dichloroaniline Donor (ID 34839): ?DGlcp(1-P-P-5)xXnucU Acceptor (ID 34886): Subst // Subst = 3,4-dichloroaniline Status: evidence in vitro
Confirmation methods: in vitro (crude extract) ID: 1058 Notes: Low N-conjugating activity towards 3,4-dichloroaniline | Organism (ID 12415): Arabidopsis thaliana Full structure (ID 34887): | ||
| Synthesized dimer: DGlcp(1-1)Subst // Subst = 4-chlorothiophenol Donor (ID 34839): ?DGlcp(1-P-P-5)xXnucU Acceptor (ID 34855): Subst // Subst = 4-chlorothiophenol Status: evidence in vitro
Confirmation methods: in vitro (crude extract) ID: 1059 Notes: Low S-conjugating activity towards 4-chlorothiophenol | Organism (ID 12415): Arabidopsis thaliana Full structure (ID 34856): | ||
| Enzyme name: 71C4 UniProt ID: Q9LML6.2 CAZy family: GT1 Gene name: UGT71C4 / AT1G07250 Gene GenBank ID: 837236 | Synthesized dimer: DGlcp(1-3)Prcat Donor (ID 34839): ?DGlcp(1-P-P-5)xXnucU Acceptor (ID 34840): xXPrcat // Prcat = 3,4-dihydroxybenzoic (protocatechuic) acid Status: evidence in vitro
Confirmation methods: in vitro (purified protein) ID: 1060 | Organism (ID 12415): Arabidopsis thaliana Full structure (ID 34890): | Lim et al. 2002 DOI: 10.1074/jbc.M109287200 |
| Synthesized dimer: DGlcp(1-5)Gent Donor (ID 34839): ?DGlcp(1-P-P-5)xXnucU Acceptor (ID 34844): xXGent // Gent = 2,5-dihydroxybenzoic (gentisic) acid Status: evidence in vitro
Confirmation methods: in vitro (purified protein) ID: 1061 | Organism (ID 12415): Arabidopsis thaliana Full structure (ID 34845): | ||
| Synthesized dimer: bDGlcp(1-3)Quercetin Donor (ID 34839): ?DGlcp(1-P-P-5)xXnucU Acceptor (ID 34846): xXQuercetin Status: evidence in vitro
Confirmation methods: in vitro (purified protein) ID: 1062 | Organism (ID 12415): Arabidopsis thaliana Full structure (ID 19231): CSDB ID(s): 44612, 46693, 47475, 48669, 48941, 60081, 60203, 60273, 60908, 61152, 61413, 61821, 62231, 63006, 63205, 63329, 63829, 64121, 64673, 64772, 64781, 64887, 64953, 65376, 65396, 65565, 65724, 65828, 65928, 65944, 65954, 65977, 65989, 66185, 66208, 66350, 66379, 66413, 66519, 66554, 66580, 66938, 66944, 67032, 67190, 67294, 67570, 67580, 67607, 67635, 67646, 67720, 67766, 67864, 67926, 67995, 68004, 68170, 68616, 68651, 68741, 68865, 120586, 131302, 139116, 146361, 146591, 146662, 146676, 146799, 270704, 270775 | Lim et al. 2004 DOI: 10.1002/bit.20154 | |
| Synthesized dimer: bDGlcp(1-7)Quercetin Donor (ID 34839): ?DGlcp(1-P-P-5)xXnucU Acceptor (ID 34846): xXQuercetin Status: evidence in vitro
Confirmation methods: in vitro (purified protein) ID: 1063 | Organism (ID 12415): Arabidopsis thaliana Full structure (ID 20812): CSDB ID(s): 48671, 48907, 62907, 65980 | ||
| Synthesized dimer: DGlcp(1-7)Subst // Subst = esculetin Donor (ID 34839): ?DGlcp(1-P-P-5)xXnucU Acceptor (ID 34847): Subst // Subst = esculetin Status: evidence in vitro
Confirmation methods: in vitro (purified protein) ID: 1064 Notes: NC: chichoriin | Organism (ID 12415): Arabidopsis thaliana Full structure (ID 34848): | Lim et al. 2003a DOI: 10.1093/glycob/cwg017 | |
| Synthesized dimer: DGlcp(1-1)Subst // Subst = 2,4,5-trichlorophenol Donor (ID 34839): ?DGlcp(1-P-P-5)xXnucU Acceptor (ID 34851): Subst // Subst = 2,4,5-trichlorophenol Status: evidence in vitro
Confirmation methods: in vitro (crude extract) ID: 1065 | Organism (ID 12415): Arabidopsis thaliana Full structure (ID 34852): | Brazier-Hicks et al. 2007 DOI: 10.1073/pnas.0706421104 | |
| Synthesized dimer: DGlcp(1-1)Subst // Subst = 4-chlorothiophenol Donor (ID 34839): ?DGlcp(1-P-P-5)xXnucU Acceptor (ID 34855): Subst // Subst = 4-chlorothiophenol Status: evidence in vitro
Confirmation methods: in vitro (crude extract) ID: 1066 Notes: Low S-conjugating activity towards 4-chlorothiophenol | Organism (ID 12415): Arabidopsis thaliana Full structure (ID 34856): | ||
| Enzyme name: 71C5 UniProt ID: Q9FE68.1 CAZy family: GT1 Gene name: UGT71C5 / AT1G07240 Gene GenBank ID: 837235 | Synthesized dimer: bDGlcp(1-3)Quercetin Donor (ID 34839): ?DGlcp(1-P-P-5)xXnucU Acceptor (ID 34846): xXQuercetin Status: evidence in vitro
Confirmation methods: in vitro (purified protein) ID: 1067 | Organism (ID 12415): Arabidopsis thaliana Organ/tissue: leaf, root Full structure (ID 19231): CSDB ID(s): 44612, 46693, 47475, 48669, 48941, 60081, 60203, 60273, 60908, 61152, 61413, 61821, 62231, 63006, 63205, 63329, 63829, 64121, 64673, 64772, 64781, 64887, 64953, 65376, 65396, 65565, 65724, 65828, 65928, 65944, 65954, 65977, 65989, 66185, 66208, 66350, 66379, 66413, 66519, 66554, 66580, 66938, 66944, 67032, 67190, 67294, 67570, 67580, 67607, 67635, 67646, 67720, 67766, 67864, 67926, 67995, 68004, 68170, 68616, 68651, 68741, 68865, 120586, 131302, 139116, 146361, 146591, 146662, 146676, 146799, 270704, 270775 | Lim et al. 2004 DOI: 10.1002/bit.20154 Yan et al. 2010 DOI: 10.1134/S1021443710060178 |
| Synthesized dimer: DGlcp(1-1)Subst // Subst = (+)-abscisic acid = SMILES CC1=CC(=O)CC({51}[C@]1(/C=C/C(=C\{1}C(=O)O)/C)O)(C)C Donor (ID 34839): ?DGlcp(1-P-P-5)xXnucU Acceptor (ID 34853): Subst // Subst = (+)-abscisic acid = SMILES CC1=CC(=O)CC({51}[C@]1(/C=C/C(=C\{1}C(=O)O)/C)O)(C)C Status: direct evidence in vivo
Confirmation methods: in vitro (crude extract), mutation, overexpression ID: 1068 | Organism (ID 12415): Arabidopsis thaliana Organ/tissue: leaf, root Full structure (ID 34854): | Yan et al. 2010 DOI: 10.1134/S1021443710060178 Liu et al. 2015 DOI: 10.1104/pp.15.00053 | |
| Synthesized dimer: DGlcp(1-7)Subst // Subst = esculetin Donor (ID 34839): ?DGlcp(1-P-P-5)xXnucU Acceptor (ID 34847): Subst // Subst = esculetin Status: evidence in vitro
Confirmation methods: in vitro (purified protein) ID: 1069 Notes: NC: chichoriin | Organism (ID 12415): Arabidopsis thaliana Organ/tissue: leaf, root Full structure (ID 34848): | Lim et al. 2003a DOI: 10.1093/glycob/cwg017 Yan et al. 2010 DOI: 10.1134/S1021443710060178 | |
| Synthesized dimer: DGlcp(1-6)Subst // Subst = esculetin Donor (ID 34839): ?DGlcp(1-P-P-5)xXnucU Acceptor (ID 34847): Subst // Subst = esculetin Status: evidence in vitro
Confirmation methods: in vitro (purified protein) ID: 1070 Notes: NC: esculin | Organism (ID 12415): Arabidopsis thaliana Organ/tissue: leaf, root Full structure (ID 34891): | ||
| Synthesized dimer: DGlcp(1-7)Subst // Subst = scopoletin Donor (ID 34839): ?DGlcp(1-P-P-5)xXnucU Acceptor (ID 34849): Subst // Subst = scopoletin Status: evidence in vitro
Confirmation methods: in vitro (purified protein) ID: 1071 Notes: NC: scopolin | Organism (ID 12415): Arabidopsis thaliana Organ/tissue: leaf, root Full structure (ID 34850): | ||
| Synthesized dimer: DGlcp(1-1)Subst // Subst = 2,4,5-trichlorophenol Donor (ID 34839): ?DGlcp(1-P-P-5)xXnucU Acceptor (ID 34851): Subst // Subst = 2,4,5-trichlorophenol Status: evidence in vitro
Confirmation methods: in vitro (crude extract) ID: 1072 Notes: Low activity towards 2,4,5-trichlorophenol | Organism (ID 12415): Arabidopsis thaliana Full structure (ID 34852): | Brazier-Hicks et al. 2007 DOI: 10.1073/pnas.0706421104 | |
| Synthesized dimer: DGlcp(1-1)Subst // Subst = 4-chlorothiophenol Donor (ID 34839): ?DGlcp(1-P-P-5)xXnucU Acceptor (ID 34855): Subst // Subst = 4-chlorothiophenol Status: evidence in vitro
Confirmation methods: in vitro (crude extract) ID: 1073 Notes: Low S-conjugating activity towards 4-chlorothiophenol | Organism (ID 12415): Arabidopsis thaliana Full structure (ID 34856): | ||
| Enzyme name: 71D1 UniProt ID: O82383.1 CAZy family: GT1 Gene name: UGT71D1 / AT2G29730 Gene GenBank ID: 817523 | Synthesized dimer: bDGlcp(1-3)Quercetin Donor (ID 34839): ?DGlcp(1-P-P-5)xXnucU Acceptor (ID 34846): xXQuercetin Status: evidence in vitro
Confirmation methods: in vitro (purified protein) ID: 1074 | Organism (ID 12415): Arabidopsis thaliana Full structure (ID 19231): CSDB ID(s): 44612, 46693, 47475, 48669, 48941, 60081, 60203, 60273, 60908, 61152, 61413, 61821, 62231, 63006, 63205, 63329, 63829, 64121, 64673, 64772, 64781, 64887, 64953, 65376, 65396, 65565, 65724, 65828, 65928, 65944, 65954, 65977, 65989, 66185, 66208, 66350, 66379, 66413, 66519, 66554, 66580, 66938, 66944, 67032, 67190, 67294, 67570, 67580, 67607, 67635, 67646, 67720, 67766, 67864, 67926, 67995, 68004, 68170, 68616, 68651, 68741, 68865, 120586, 131302, 139116, 146361, 146591, 146662, 146676, 146799, 270704, 270775 | Lim et al. 2004 DOI: 10.1002/bit.20154 |
| Synthesized dimer: DGlcp(1-7)Subst // Subst = esculetin Donor (ID 34839): ?DGlcp(1-P-P-5)xXnucU Acceptor (ID 34847): Subst // Subst = esculetin Status: evidence in vitro
Confirmation methods: in vitro (purified protein) ID: 1075 Notes: NC: chichoriin | Organism (ID 12415): Arabidopsis thaliana Full structure (ID 34848): | Lim et al. 2003a DOI: 10.1093/glycob/cwg017 | |
| Synthesized dimer: DGlcp(1-7)Subst // Subst = scopoletin Donor (ID 34839): ?DGlcp(1-P-P-5)xXnucU Acceptor (ID 34849): Subst // Subst = scopoletin Status: evidence in vitro
Confirmation methods: in vitro (purified protein) ID: 1076 Notes: NC: scopolin | Organism (ID 12415): Arabidopsis thaliana Full structure (ID 34850): | ||
| Synthesized dimer: DGlcp(1-1)Subst // Subst = 2,4,5-trichlorophenol Donor (ID 34839): ?DGlcp(1-P-P-5)xXnucU Acceptor (ID 34851): Subst // Subst = 2,4,5-trichlorophenol Status: evidence in vitro
Confirmation methods: in vitro (crude extract) ID: 1077 | Organism (ID 12415): Arabidopsis thaliana Full structure (ID 34852): | Brazier-Hicks et al. 2007 DOI: 10.1073/pnas.0706421104 | |
| Synthesized dimer: DGlcp(1-1)Subst // Subst = 4-chlorothiophenol Donor (ID 34839): ?DGlcp(1-P-P-5)xXnucU Acceptor (ID 34855): Subst // Subst = 4-chlorothiophenol Status: evidence in vitro
Confirmation methods: in vitro (crude extract) ID: 1078 Notes: Low S-conjugating activity towards 4-chlorothiophenol | Organism (ID 12415): Arabidopsis thaliana Full structure (ID 34856): | ||
| Enzyme name: 72B1 UniProt ID: Q9M156.1 CAZy family: GT1 Gene name: UGT72B1 / AT4G01070 Gene GenBank ID: 827912 | Synthesized dimer: DGlcp(1-3)Prcat Donor (ID 34839): ?DGlcp(1-P-P-5)xXnucU Acceptor (ID 34840): xXPrcat // Prcat = 3,4-dihydroxybenzoic (protocatechuic) acid Status: evidence in vitro
Confirmation methods: in vitro (purified protein) ID: 1079 | Organism (ID 12415): Arabidopsis thaliana Organ/tissue: young stem Full structure (ID 34890): | Lim et al. 2002 DOI: 10.1074/jbc.M109287200 Yang et al. 2005 DOI: 10.1002/cbic.200400100 Lin et al. 2016 DOI: 10.1111/tpj.13229 |
| Synthesized dimer: DGlcp(1-3)3HOBz Donor (ID 34839): ?DGlcp(1-P-P-5)xXnucU Acceptor (ID 34892): xX3HOBz // 3HOBz = 3-hydroxybenzoic (m-hydroxybenzoic) acid Status: evidence in vitro
Confirmation methods: in vitro (purified protein) ID: 1080 | Organism (ID 12415): Arabidopsis thaliana Organ/tissue: young stem Full structure (ID 34893): | Lim et al. 2002 DOI: 10.1074/jbc.M109287200 Lin et al. 2016 DOI: 10.1111/tpj.13229 | |
| Synthesized dimer: DGlcp(1-3)2,3HOBz Donor (ID 34839): ?DGlcp(1-P-P-5)xXnucU Acceptor (ID 34894): xX2,3HOBz // 2,3HOBz = 2,3-hydroxybenzoic acid Status: evidence in vitro
Confirmation methods: in vitro (purified protein) ID: 1081 | Organism (ID 12415): Arabidopsis thaliana Organ/tissue: young stem Full structure (ID 34895): | ||
| Synthesized dimer: DGlcp(1-4)bRes Donor (ID 34839): ?DGlcp(1-P-P-5)xXnucU Acceptor (ID 34842): xXbRes // bRes = 2,4-dihydroxybenzoic (beta-resorcyclic) acid Status: evidence in vitro
Confirmation methods: in vitro (purified protein) ID: 1082 | Organism (ID 12415): Arabidopsis thaliana Organ/tissue: young stem Full structure (ID 34843): | ||
| Synthesized dimer: DGlcp(1-5)Gent Donor (ID 34839): ?DGlcp(1-P-P-5)xXnucU Acceptor (ID 34896): Subst // Subst = 2,5-dihydroxybenzoic (gentisic) acid Status: evidence in vitro
Confirmation methods: in vitro (purified protein) ID: 1083 | Organism (ID 12415): Arabidopsis thaliana Organ/tissue: young stem Full structure (ID 34845): | Lim et al. 2002 DOI: 10.1074/jbc.M109287200 Yang et al. 2005 DOI: 10.1002/cbic.200400100 Lin et al. 2016 DOI: 10.1111/tpj.13229 | |
| Synthesized dimer: DGlcp(1-6)Subst // Subst = esculetin Donor (ID 34839): ?DGlcp(1-P-P-5)xXnucU Acceptor (ID 34847): Subst // Subst = esculetin Status: evidence in vitro
Confirmation methods: in vitro (purified protein) ID: 1084 Notes: NC: esculin | Organism (ID 12415): Arabidopsis thaliana Organ/tissue: young stem Full structure (ID 34891): | Lim et al. 2003a DOI: 10.1093/glycob/cwg017 Yang et al. 2005 DOI: 10.1002/cbic.200400100 Lin et al. 2016 DOI: 10.1111/tpj.13229 | |
| Synthesized dimer: DGlcp(1-7)Subst // Subst = scopoletin Donor (ID 34839): ?DGlcp(1-P-P-5)xXnucU Acceptor (ID 34849): Subst // Subst = scopoletin Status: evidence in vitro
Confirmation methods: in vitro (purified protein) ID: 1085 Notes: NC: scopolin | Organism (ID 12415): Arabidopsis thaliana Organ/tissue: young stem Full structure (ID 34850): | ||
| Synthesized dimer: bDGlcp(1-1)Subst // Subst = 2,4,5-trichlorophenol Donor (ID 34839): ?DGlcp(1-P-P-5)xXnucU Acceptor (ID 34851): Subst // Subst = 2,4,5-trichlorophenol Status: direct evidence in vivo
Confirmation methods: in vitro (crude extract), in vitro (purified protein), mutation ID: 1086 | Organism (ID 12415): Arabidopsis thaliana Organ/tissue: young stem Full structure (ID 34897): | Brazier-Hicks et al. 2007 DOI: 10.1073/pnas.0706421104 Lin et al. 2016 DOI: 10.1111/tpj.13229 Brazier-Hicks et al. 2005 DOI: 10.1111/j.1365-313X.2005.02398.x Loutre et al. 2003 DOI: 10.1046/j.1365-313X.2003.01742.x | |
| Synthesized dimer: bDGlcp(1-1)Subst // Subst = 3,4-dichloroaniline Donor (ID 34898): aDGlcp(1-P-P-5)xXnucU Acceptor (ID 34886): Subst // Subst = 3,4-dichloroaniline Status: direct evidence in vivo
Confirmation methods: in vitro (crude extract), in vitro (purified protein), mutation ID: 1087 Notes: N-conjugating activity towards 3,4-dichloroaniline | Organism (ID 12415): Arabidopsis thaliana Organ/tissue: young stem Full structure (ID 34899): | Brazier-Hicks et al. 2007 DOI: 10.1073/pnas.0706421104 Yang et al. 2005 DOI: 10.1002/cbic.200400100 Lin et al. 2016 DOI: 10.1111/tpj.13229 Brazier-Hicks et al. 2005 DOI: 10.1111/j.1365-313X.2005.02398.x Loutre et al. 2003 DOI: 10.1046/j.1365-313X.2003.01742.x | |
| Synthesized dimer: DManp(1-1)Subst // Subst = 3,4-dichloroaniline Donor (ID 34900): ?DManp(1-P-P-5)xXnucU Acceptor (ID 34886): Subst // Subst = 3,4-dichloroaniline Status: evidence in vitro
Confirmation methods: in vitro (purified protein) ID: 1088 | Organism (ID 12415): Arabidopsis thaliana Organ/tissue: young stem Full structure (ID 34901): | Yang et al. 2005 DOI: 10.1002/cbic.200400100 Lin et al. 2016 DOI: 10.1111/tpj.13229 | |
| Synthesized dimer: DGlcp(1-1)Subst // Subst = 1-naphtol Donor (ID 34839): ?DGlcp(1-P-P-5)xXnucU Acceptor (ID 34902): Subst // Subst = 1-naphtol Status: indirect evidence in vivo
Confirmation methods: mutation ID: 1089 | Organism (ID 12415): Arabidopsis thaliana Organ/tissue: young stem Full structure (ID 34903): | Lin et al. 2016 DOI: 10.1111/tpj.13229 Brazier-Hicks et al. 2005 DOI: 10.1111/j.1365-313X.2005.02398.x | |
| Synthesized dimer: DGlcp(1-1)Subst // Subst = 2,4-dichloroaniline Donor (ID 34839): ?DGlcp(1-P-P-5)xXnucU Acceptor (ID 34904): Subst // Subst = 2,4-dichloroaniline Status: evidence in vitro
Confirmation methods: in vitro (purified protein), in vitro (crude extract), mutation (in recombinant protein) ID: 1090 Notes: Low N-conjugating activity towards 2,4-dichloroaniline | Organism (ID 12415): Arabidopsis thaliana Organ/tissue: young stem Full structure (ID 34905): | Brazier-Hicks et al. 2007 DOI: 10.1073/pnas.0706421104 Lin et al. 2016 DOI: 10.1111/tpj.13229 Loutre et al. 2003 DOI: 10.1046/j.1365-313X.2003.01742.x | |
| Synthesized dimer: DGlcp(1-1)Subst // Subst = 3,4,5-trichloroaniline Donor (ID 34839): ?DGlcp(1-P-P-5)xXnucU Acceptor (ID 34906): Subst // Subst = 3,4,5-trichloroaniline Status: evidence in vitro
Confirmation methods: in vitro (purified protein) ID: 1091 Notes: N-conjugating activity towards 3,4,5-trichloroaniline | Organism (ID 12415): Arabidopsis thaliana Organ/tissue: young stem Full structure (ID 34907): | Lin et al. 2016 DOI: 10.1111/tpj.13229 Loutre et al. 2003 DOI: 10.1046/j.1365-313X.2003.01742.x | |
| Synthesized dimer: DGlcp(1-1)Subst // Subst = 4-chlorothiophenol Donor (ID 34839): ?DGlcp(1-P-P-5)xXnucU Acceptor (ID 34855): Subst // Subst = 4-chlorothiophenol Status: evidence in vitro
Confirmation methods: in vitro (crude extract) ID: 1092 Notes: Low S-conjugating activity towards 4-chlorothiophenol | Organism (ID 12415): Arabidopsis thaliana Organ/tissue: young stem Full structure (ID 34856): | Brazier-Hicks et al. 2007 DOI: 10.1073/pnas.0706421104 Lin et al. 2016 DOI: 10.1111/tpj.13229 | |
| Synthesized dimer: DGlcp(1-1)Subst // Subst = 2,4,5-dichloroaniline Donor (ID 34839): ?DGlcp(1-P-P-5)xXnucU Acceptor (ID 34908): Subst // Subst = 2,4,5-dichloroaniline Status: evidence in vitro
Confirmation methods: in vitro (crude extract), mutation (in recombinant protein) ID: 1093 Notes: N-conjugating activity towards 2,4,5-trichloroaniline | Organism (ID 12415): Arabidopsis thaliana Organ/tissue: young stem Full structure (ID 34909): | ||
| Synthesized dimer: DGlcp(1-1)Subst // Subst = 2,4-dichlorophenol Donor (ID 34839): ?DGlcp(1-P-P-5)xXnucU Acceptor (ID 34910): Subst // Subst = 2,4-dichlorophenol Status: evidence in vitro
Confirmation methods: in vitro (crude extract), mutation (in recombinant protein) ID: 1094 | Organism (ID 12415): Arabidopsis thaliana Organ/tissue: young stem Full structure (ID 34911): | ||
| Synthesized dimer: DGlcp(1-1)Subst // Subst = 3,4-dichlorophenol Donor (ID 34839): ?DGlcp(1-P-P-5)xXnucU Acceptor (ID 34912): Subst // Subst = 3,4-dichlorophenol Status: evidence in vitro
Confirmation methods: in vitro (crude extract), mutation (in recombinant protein) ID: 1095 | Organism (ID 12415): Arabidopsis thaliana Organ/tissue: young stem Full structure (ID 34913): | ||
| Synthesized dimer: DGlcp(1-4)Subst // Subst = picloram Donor (ID 34839): ?DGlcp(1-P-P-5)xXnucU Acceptor (ID 34914): Subst // Subst = picloram Status: evidence in vitro
Confirmation methods: in vitro (purified protein) ID: 1096 Notes: Low N-conjugating activity towards picloram | Organism (ID 12415): Arabidopsis thaliana Organ/tissue: young stem Full structure (ID 34915): | Lin et al. 2016 DOI: 10.1111/tpj.13229 Loutre et al. 2003 DOI: 10.1046/j.1365-313X.2003.01742.x | |
| Synthesized dimer: DGlcp(1-1)Subst // Subst = 2,3,4-trichlorophenol Donor (ID 34839): ?DGlcp(1-P-P-5)xXnucU Acceptor (ID 34916): Subst // Subst = 2,3,4-trichlorophenol Status: evidence in vitro
Confirmation methods: in vitro (purified protein) ID: 1097 | Organism (ID 12415): Arabidopsis thaliana Organ/tissue: young stem Full structure (ID 34917): | ||
| Synthesized dimer: DGlcp(1-1)Subst // Subst = 2,3,6-trichlorophenol Donor (ID 34839): ?DGlcp(1-P-P-5)xXnucU Acceptor (ID 34918): Subst // Subst = 2,3,6-trichlorophenol Status: evidence in vitro
Confirmation methods: in vitro (purified protein) ID: 1098 Notes: Low activity | Organism (ID 12415): Arabidopsis thaliana Organ/tissue: young stem Full structure (ID 34919): | ||
| Synthesized dimer: DGlcp(1-1)Ph Donor (ID 34839): ?DGlcp(1-P-P-5)xXnucU Acceptor (ID 34920): Ph Status: evidence in vitro
Confirmation methods: in vitro (purified protein) ID: 1099 Notes: Low activity | Organism (ID 12415): Arabidopsis thaliana Organ/tissue: young stem Full structure (ID 34921): | ||
| Synthesized dimer: DGlcp(1-1)Subst // Subst = 4-nitrophenol = SMILES C1=C{1}C(=CC=C1[N+](=O)[O-])O Donor (ID 34839): ?DGlcp(1-P-P-5)xXnucU Acceptor (ID 34922): Subst // Subst = 4-nitrophenol = SMILES C1=C{1}C(=CC=C1[N+](=O)[O-])O Status: evidence in vitro
Confirmation methods: in vitro (purified protein) ID: 1100 | Organism (ID 12415): Arabidopsis thaliana Organ/tissue: young stem Full structure (ID 34923): | ||
| Synthesized dimer: DGlcp(1-?)Subst // Subst = 4-hydroxyphenylpyruvic acid Donor (ID 34839): ?DGlcp(1-P-P-5)xXnucU Acceptor (ID 34924): Subst // Subst = 4-hydroxyphenylpyruvic acid Status: evidence in vitro
Confirmation methods: in vitro (purified protein) ID: 1101 | Organism (ID 12415): Arabidopsis thaliana Organ/tissue: young stem Full structure (ID 34925): | ||
| Synthesized dimer: DGlcp(1-7)Subst // Subst = 7-hydroxycoumarin (umbelliferone) Donor (ID 34898): aDGlcp(1-P-P-5)xXnucU Acceptor (ID 34926): Subst // Subst = 7-hydroxycoumarin (umbelliferone) Status: evidence in vitro
Confirmation methods: in vitro (purified protein) ID: 1102 | Organism (ID 12415): Arabidopsis thaliana Organ/tissue: young stem Full structure (ID 34927): | Yang et al. 2005 DOI: 10.1002/cbic.200400100 Lin et al. 2016 DOI: 10.1111/tpj.13229 | |
| Synthesized dimer: DGlcp(1-7)Subst // Subst = 4-methyl-7-hydroxycoumarin (4-methylumbelliferone) Donor (ID 34898): aDGlcp(1-P-P-5)xXnucU Acceptor (ID 34928): Subst // Subst = 4-methyl-7-hydroxycoumarin (4-methylumbelliferone) Status: evidence in vitro
Confirmation methods: in vitro (purified protein) ID: 1103 | Organism (ID 12415): Arabidopsis thaliana Organ/tissue: young stem Full structure (ID 34929): | ||
| Synthesized dimer: DManp(1-7)Subst // Subst = 7-hydroxycoumarin (umbelliferone) Donor (ID 34900): ?DManp(1-P-P-5)xXnucU Acceptor (ID 34926): Subst // Subst = 7-hydroxycoumarin (umbelliferone) Status: evidence in vitro
Confirmation methods: in vitro (purified protein) ID: 1104 | Organism (ID 12415): Arabidopsis thaliana Organ/tissue: young stem Full structure (ID 34930): | ||
| Synthesized dimer: DGlcp(1-4)Subst // Subst = coniferyl aldehyde Donor (ID 34839): ?DGlcp(1-P-P-5)xXnucU Acceptor (ID 34931): Subst // Subst = coniferyl aldehyde Status: evidence in vitro
Confirmation methods: in vitro (purified protein) ID: 1105 | Organism (ID 12415): Arabidopsis thaliana Organ/tissue: young stem Full structure (ID 34932): | Lin et al. 2016 DOI: 10.1111/tpj.13229 | |
| Synthesized dimer: DGlcp(1-?)Subst // Subst = coniferyl alcohol = SMILES COC1=CC(/C=C/{9}CO)=C{3}C(O)={4}C1O Donor (ID 34839): ?DGlcp(1-P-P-5)xXnucU Acceptor (ID 34933): Subst // Subst = coniferyl alcohol = SMILES COC1=CC(/C=C/{9}CO)=C{3}C(O)={4}C1O Status: evidence in vitro
Confirmation methods: in vitro (purified protein) ID: 1106 | Organism (ID 12415): Arabidopsis thaliana Organ/tissue: young stem Full structure (ID 34934): | ||
| Synthesized dimer: DGlcp(1-?)Subst // Subst = dihydroconiferyl alcohol Donor (ID 34839): ?DGlcp(1-P-P-5)xXnucU Acceptor (ID 34935): Subst // Subst = dihydroconiferyl alcohol Status: evidence in vitro
Confirmation methods: in vitro (purified protein) ID: 1107 | Organism (ID 12415): Arabidopsis thaliana Organ/tissue: young stem Full structure (ID 34936): | ||
| Synthesized dimer: DGlcp(1-?)Subst // Subst = p-coumaryl alcohol Donor (ID 34839): ?DGlcp(1-P-P-5)xXnucU Acceptor (ID 34937): Subst // Subst = p-coumaryl alcohol Status: evidence in vitro
Confirmation methods: in vitro (purified protein) ID: 1108 | Organism (ID 12415): Arabidopsis thaliana Organ/tissue: young stem Full structure (ID 34938): | ||
| Synthesized dimer: DGlcp(1-4)Subst // Subst = p-coumaryl aldehyde Donor (ID 34839): ?DGlcp(1-P-P-5)xXnucU Acceptor (ID 34939): Subst // Subst = p-coumaryl aldehyde Status: evidence in vitro
Confirmation methods: in vitro (purified protein) ID: 1109 | Organism (ID 12415): Arabidopsis thaliana Organ/tissue: young stem Full structure (ID 34940): | ||
| Enzyme name: 72B3 UniProt ID: Q9LNI1.1 CAZy family: GT1 Gene name: UGT72B3 / AT1G01420 Gene GenBank ID: 837503 | Synthesized dimer: bDGlcp(1-3)Quercetin Donor (ID 34839): ?DGlcp(1-P-P-5)xXnucU Acceptor (ID 34846): xXQuercetin Status: evidence in vitro
Confirmation methods: in vitro (purified protein) ID: 1110 | Organism (ID 12415): Arabidopsis thaliana Full structure (ID 19231): CSDB ID(s): 44612, 46693, 47475, 48669, 48941, 60081, 60203, 60273, 60908, 61152, 61413, 61821, 62231, 63006, 63205, 63329, 63829, 64121, 64673, 64772, 64781, 64887, 64953, 65376, 65396, 65565, 65724, 65828, 65928, 65944, 65954, 65977, 65989, 66185, 66208, 66350, 66379, 66413, 66519, 66554, 66580, 66938, 66944, 67032, 67190, 67294, 67570, 67580, 67607, 67635, 67646, 67720, 67766, 67864, 67926, 67995, 68004, 68170, 68616, 68651, 68741, 68865, 120586, 131302, 139116, 146361, 146591, 146662, 146676, 146799, 270704, 270775 | Lim et al. 2004 DOI: 10.1002/bit.20154 |
| Synthesized dimer: DGlcp(1-7)Subst // Subst = esculetin Donor (ID 34839): ?DGlcp(1-P-P-5)xXnucU Acceptor (ID 34847): Subst // Subst = esculetin Status: evidence in vitro
Confirmation methods: in vitro (purified protein) ID: 1111 Notes: NC: chichoriin | Organism (ID 12415): Arabidopsis thaliana Full structure (ID 34848): | Lim et al. 2003a DOI: 10.1093/glycob/cwg017 | |
| Synthesized dimer: DGlcp(1-7)Subst // Subst = scopoletin Donor (ID 34839): ?DGlcp(1-P-P-5)xXnucU Acceptor (ID 34849): Subst // Subst = scopoletin Status: evidence in vitro
Confirmation methods: in vitro (purified protein) ID: 1112 Notes: NC: scopolin | Organism (ID 12415): Arabidopsis thaliana Full structure (ID 34850): | ||
| Synthesized dimer: DGlcp(1-1)Subst // Subst = 2,4,5-trichlorophenol Donor (ID 34839): ?DGlcp(1-P-P-5)xXnucU Acceptor (ID 34851): Subst // Subst = 2,4,5-trichlorophenol Status: evidence in vitro
Confirmation methods: in vitro (crude extract) ID: 1113 | Organism (ID 12415): Arabidopsis thaliana Full structure (ID 34852): | Brazier-Hicks et al. 2007 DOI: 10.1073/pnas.0706421104 | |
| Synthesized dimer: DGlcp(1-1)Subst // Subst = 3,4-dichloroaniline Donor (ID 34839): ?DGlcp(1-P-P-5)xXnucU Acceptor (ID 34886): Subst // Subst = 3,4-dichloroaniline Status: evidence in vitro
Confirmation methods: in vitro (crude extract) ID: 1114 Notes: N-conjugating activity towards 3,4-dichloroaniline | Organism (ID 12415): Arabidopsis thaliana Full structure (ID 34887): | ||
| Synthesized dimer: DGlcp(1-1)Subst // Subst = 4-chlorothiophenol Donor (ID 34839): ?DGlcp(1-P-P-5)xXnucU Acceptor (ID 34855): Subst // Subst = 4-chlorothiophenol Status: evidence in vitro
Confirmation methods: in vitro (crude extract) ID: 1115 Notes: Low S-conjugating activity towards 4-chlorothiophenol | Organism (ID 12415): Arabidopsis thaliana Full structure (ID 34856): | ||
| Synthesized dimer: DGlcp(1-4)Subst // Subst = coniferyl aldehyde Donor (ID 34839): ?DGlcp(1-P-P-5)xXnucU Acceptor (ID 34931): Subst // Subst = coniferyl aldehyde Status: evidence in vitro
Confirmation methods: in vitro (purified protein) ID: 1116 | Organism (ID 12415): Arabidopsis thaliana Organ/tissue: basal petiole, young leaf margins, floral stem Full structure (ID 34932): | Lin et al. 2016 DOI: 10.1111/tpj.13229 | |
| Synthesized dimer: DGlcp(1-4)Subst // Subst = sinapyl aldehyde Donor (ID 34839): ?DGlcp(1-P-P-5)xXnucU Acceptor (ID 34941): Subst // Subst = sinapyl aldehyde Status: evidence in vitro
Confirmation methods: in vitro (purified protein) ID: 1117 | Organism (ID 12415): Arabidopsis thaliana Organ/tissue: basal petiole, young leaf margins, floral stem Full structure (ID 34942): | ||
| Enzyme name: 72C1 UniProt ID: O23205.3 CAZy family: GT1 Gene name: AT4G36770 Gene GenBank ID: 829830 | Synthesized dimer: DGlcp(1-6)Subst // Subst = esculetin Donor (ID 34839): ?DGlcp(1-P-P-5)xXnucU Acceptor (ID 34847): Subst // Subst = esculetin Status: evidence in vitro
Confirmation methods: in vitro (purified protein) ID: 1118 Notes: NC: esculin | Organism (ID 12415): Arabidopsis thaliana Full structure (ID 34891): | Lim et al. 2003a DOI: 10.1093/glycob/cwg017 |
| Synthesized dimer: DGlcp(1-1)Subst // Subst = 2,4,5-trichlorophenol Donor (ID 34839): ?DGlcp(1-P-P-5)xXnucU Acceptor (ID 34851): Subst // Subst = 2,4,5-trichlorophenol Status: evidence in vitro
Confirmation methods: in vitro (crude extract) ID: 1119 | Organism (ID 12415): Arabidopsis thaliana Full structure (ID 34852): | Brazier-Hicks et al. 2007 DOI: 10.1073/pnas.0706421104 | |
| Synthesized dimer: DGlcp(1-1)Subst // Subst = 3,4-dichloroaniline Donor (ID 34839): ?DGlcp(1-P-P-5)xXnucU Acceptor (ID 34886): Subst // Subst = 3,4-dichloroaniline Status: evidence in vitro
Confirmation methods: in vitro (crude extract) ID: 1120 Notes: Low N-conjugating activity towards 3,4-dichloroaniline | Organism (ID 12415): Arabidopsis thaliana Full structure (ID 34887): | ||
| Synthesized dimer: DGlcp(1-1)Subst // Subst = 4-chlorothiophenol Donor (ID 34839): ?DGlcp(1-P-P-5)xXnucU Acceptor (ID 34855): Subst // Subst = 4-chlorothiophenol Status: evidence in vitro
Confirmation methods: in vitro (crude extract) ID: 1121 Notes: S-conjugating activity towards 4-chlorothiophenol | Organism (ID 12415): Arabidopsis thaliana Full structure (ID 34856): | ||
| Enzyme name: 72D1 UniProt ID: Q9ZU72.1 CAZy family: GT1 Gene name: AT2G18570 Gene GenBank ID: 816372 | Synthesized dimer: DGlcp(1-6)Subst // Subst = esculetin Donor (ID 34839): ?DGlcp(1-P-P-5)xXnucU Acceptor (ID 34847): Subst // Subst = esculetin Status: evidence in vitro
Confirmation methods: in vitro (purified protein) ID: 1122 Notes: NC: esculin | Organism (ID 12415): Arabidopsis thaliana Full structure (ID 34891): | Lim et al. 2003a DOI: 10.1093/glycob/cwg017 |
| Synthesized dimer: DGlcp(1-7)Subst // Subst = scopoletin Donor (ID 34839): ?DGlcp(1-P-P-5)xXnucU Acceptor (ID 34849): Subst // Subst = scopoletin Status: evidence in vitro
Confirmation methods: in vitro (purified protein) ID: 1123 Notes: NC: scopolin | Organism (ID 12415): Arabidopsis thaliana Full structure (ID 34850): | ||
| Synthesized dimer: DGlcp(1-1)Subst // Subst = 2,4,5-trichlorophenol Donor (ID 34839): ?DGlcp(1-P-P-5)xXnucU Acceptor (ID 34851): Subst // Subst = 2,4,5-trichlorophenol Status: evidence in vitro
Confirmation methods: in vitro (crude extract) ID: 1124 | Organism (ID 12415): Arabidopsis thaliana Full structure (ID 34852): | Brazier-Hicks et al. 2007 DOI: 10.1073/pnas.0706421104 | |
| Synthesized dimer: DGlcp(1-1)Subst // Subst = 3,4-dichloroaniline Donor (ID 34839): ?DGlcp(1-P-P-5)xXnucU Acceptor (ID 34886): Subst // Subst = 3,4-dichloroaniline Status: evidence in vitro
Confirmation methods: in vitro (crude extract) ID: 1125 Notes: Low N-conjugating activity towards 3,4-dichloroaniline | Organism (ID 12415): Arabidopsis thaliana Full structure (ID 34887): | ||
| Synthesized dimer: DGlcp(1-1)Subst // Subst = 4-chlorothiophenol Donor (ID 34839): ?DGlcp(1-P-P-5)xXnucU Acceptor (ID 34855): Subst // Subst = 4-chlorothiophenol Status: evidence in vitro
Confirmation methods: in vitro (crude extract) ID: 1126 Notes: Low N-conjugating activity towards 3,4-dichloroaniline | Organism (ID 12415): Arabidopsis thaliana Full structure (ID 34856): | ||
| Enzyme name: 72E1 UniProt ID: Q94A84.1 CAZy family: GT1 Gene name: UGT72E1 / At3g50740 Gene GenBank ID: 824238 | Synthesized dimer: DGlcp(1-4)Subst // Subst = sinapyl aldehyde Donor (ID 34839): ?DGlcp(1-P-P-5)xXnucU Acceptor (ID 34941): Subst // Subst = sinapyl aldehyde Status: evidence in vitro
Confirmation methods: in vitro (purified protein) ID: 1127 | Organism (ID 12415): Arabidopsis thaliana Organ/tissue: seedling, root, leaf Full structure (ID 34942): | Lim et al. 2005b DOI: 10.1016/j.febslet.2005.04.016 Lanot et al. 2006 DOI: 10.1111/j.1365-313X.2006.02872.x |
| Synthesized dimer: DGlcp(1-4)Subst // Subst = coniferyl aldehyde Donor (ID 34839): ?DGlcp(1-P-P-5)xXnucU Acceptor (ID 34931): Subst // Subst = coniferyl aldehyde Status: evidence in vitro
Confirmation methods: in vitro (purified protein) ID: 1128 | Organism (ID 12415): Arabidopsis thaliana Organ/tissue: seedling, root, leaf Full structure (ID 34932): | ||
| Enzyme name: 72E2 UniProt ID: Q9LVR1.1 CAZy family: GT1 Gene name: UGT72E2 / At5g66690 Gene GenBank ID: 836802 | Synthesized dimer: DGlcp(1-4)Subst // Subst = sinapyl aldehyde Donor (ID 34839): ?DGlcp(1-P-P-5)xXnucU Acceptor (ID 34941): Subst // Subst = sinapyl aldehyde Status: evidence in vitro
Confirmation methods: in vitro (purified protein) ID: 1129 | Organism (ID 12415): Arabidopsis thaliana Organ/tissue: seedling, root Full structure (ID 34942): | |
| Synthesized dimer: DGlcp(1-4)Subst // Subst = coniferyl aldehyde Donor (ID 34839): ?DGlcp(1-P-P-5)xXnucU Acceptor (ID 34931): Subst // Subst = coniferyl aldehyde Status: evidence in vitro
Confirmation methods: in vitro (purified protein) ID: 1130 | Organism (ID 12415): Arabidopsis thaliana Organ/tissue: seedling, root Full structure (ID 34932): | ||
| Synthesized dimer: DGlcp(1-4)Subst // Subst = sinapyl alcohol Donor (ID 34839): ?DGlcp(1-P-P-5)xXnucU Acceptor (ID 34943): Subst // Subst = sinapyl alcohol Status: direct evidence in vivo
Confirmation methods: in vitro (purified protein), overexpression, knockdown ID: 1131 Notes: NC: syringin | Organism (ID 12415): Arabidopsis thaliana Organ/tissue: seedling, root Full structure (ID 34944): | Lim et al. 2005b DOI: 10.1016/j.febslet.2005.04.016 Lanot et al. 2006 DOI: 10.1111/j.1365-313X.2006.02872.x Chu et al. 2014 DOI: 10.1016/j.phytochem.2014.03.003 Messner et al. 2003 DOI: 10.1007/s00425-002-0969-0 Lim et al. 2001 DOI: 10.1074/jbc.M007263200 | |
| Synthesized dimer: DGlcp(1-4)Subst // Subst = coniferyl alcohol = SMILES COC1=CC(/C=C/{9}CO)=C{3}C(O)={4}C1O Donor (ID 34839): ?DGlcp(1-P-P-5)xXnucU Acceptor (ID 34933): Subst // Subst = coniferyl alcohol = SMILES COC1=CC(/C=C/{9}CO)=C{3}C(O)={4}C1O Status: direct evidence in vivo
Confirmation methods: in vitro (purified protein), overexpression, knockdown ID: 1132 Notes: NC: coniferin | Organism (ID 12415): Arabidopsis thaliana Organ/tissue: seedling, root Full structure (ID 27557): CSDB ID(s): 60811 | Lim et al. 2005b DOI: 10.1016/j.febslet.2005.04.016 Lanot et al. 2006 DOI: 10.1111/j.1365-313X.2006.02872.x Chu et al. 2014 DOI: 10.1016/j.phytochem.2014.03.003 Lim et al. 2001 DOI: 10.1074/jbc.M007263200 | |
| Synthesized dimer: DGlcp(1-4)Sin Donor (ID 34839): ?DGlcp(1-P-P-5)xXnucU Acceptor (ID 34945): xXSin Status: evidence in vitro
Confirmation methods: in vitro (purified protein) ID: 1133 | Organism (ID 12415): Arabidopsis thaliana Organ/tissue: seedling, root Full structure (ID 34946): | Lim et al. 2005b DOI: 10.1016/j.febslet.2005.04.016 Lanot et al. 2006 DOI: 10.1111/j.1365-313X.2006.02872.x Lim et al. 2001 DOI: 10.1074/jbc.M007263200 | |
| Synthesized dimer: DGlcp(1-4)Fer Donor (ID 34839): ?DGlcp(1-P-P-5)xXnucU Acceptor (ID 34947): xXFer Status: evidence in vitro
Confirmation methods: in vitro (purified protein), expression in E.coli (as whole-cell biocatalyst) ID: 1134 | Organism (ID 12415): Arabidopsis thaliana Expressed in: E. coli; seedling, root Full structure (ID 34948): | Han et al. 2016 DOI: 10.1007/s13765-016-0186-3 Lim et al. 2005b DOI: 10.1016/j.febslet.2005.04.016 Lanot et al. 2006 DOI: 10.1111/j.1365-313X.2006.02872.x Lim et al. 2001 DOI: 10.1074/jbc.M007263200 | |
| Synthesized dimer: DGlcp(1-6)Subst // Subst = esculetin Donor (ID 34839): ?DGlcp(1-P-P-5)xXnucU Acceptor (ID 34847): Subst // Subst = esculetin Status: evidence in vitro
Confirmation methods: in vitro (purified protein) ID: 1135 Notes: NC: esculin | Organism (ID 12415): Arabidopsis thaliana Organ/tissue: seedling, root Full structure (ID 34891): | Lim et al. 2003a DOI: 10.1093/glycob/cwg017 Lanot et al. 2006 DOI: 10.1111/j.1365-313X.2006.02872.x | |
| Synthesized dimer: DGlcp(1-7)Subst // Subst = scopoletin Donor (ID 34839): ?DGlcp(1-P-P-5)xXnucU Acceptor (ID 34849): Subst // Subst = scopoletin Status: evidence in vitro
Confirmation methods: in vitro (purified protein) ID: 1136 Notes: NC: scopolin | Organism (ID 12415): Arabidopsis thaliana Organ/tissue: seedling, root Full structure (ID 34850): | ||
| Synthesized dimer: DGlcp(1-1)Subst // Subst = 2,4,5-trichlorophenol Donor (ID 34839): ?DGlcp(1-P-P-5)xXnucU Acceptor (ID 34851): Subst // Subst = 2,4,5-trichlorophenol Status: evidence in vitro
Confirmation methods: in vitro (purified protein), in vitro (crude extract) ID: 1137 | Organism (ID 12415): Arabidopsis thaliana Organ/tissue: seedling, root Full structure (ID 34852): | Brazier-Hicks et al. 2007 DOI: 10.1073/pnas.0706421104 Lanot et al. 2006 DOI: 10.1111/j.1365-313X.2006.02872.x Messner et al. 2003 DOI: 10.1007/s00425-002-0969-0 | |
| Synthesized dimer: DGlcp(1-1)Subst // Subst = 3,4-dichloroaniline Donor (ID 34839): ?DGlcp(1-P-P-5)xXnucU Acceptor (ID 34886): Subst // Subst = 3,4-dichloroaniline Status: evidence in vitro
Confirmation methods: in vitro (crude extract) ID: 1138 Notes: N-conjugating activity towards 3,4-dichloroaniline | Organism (ID 12415): Arabidopsis thaliana Full structure (ID 34887): | Brazier-Hicks et al. 2007 DOI: 10.1073/pnas.0706421104 | |
| Enzyme name: 72E3 UniProt ID: O81498.1 CAZy family: GT1 Gene name: UGT72E3 / At5g26310 Gene GenBank ID: 832700 | Synthesized dimer: DGlcp(1-4)Subst // Subst = sinapyl alcohol Donor (ID 34839): ?DGlcp(1-P-P-5)xXnucU Acceptor (ID 34943): Subst // Subst = sinapyl alcohol Status: direct evidence in vivo
Confirmation methods: in vitro (purified protein), overexpression ID: 1139 Notes: NC: syringin | Organism (ID 12415): Arabidopsis thaliana Organ/tissue: seedling, root, flower, silique Full structure (ID 34944): | Lim et al. 2005b DOI: 10.1016/j.febslet.2005.04.016 Lanot et al. 2006 DOI: 10.1111/j.1365-313X.2006.02872.x Chu et al. 2014 DOI: 10.1016/j.phytochem.2014.03.003 Lim et al. 2001 DOI: 10.1074/jbc.M007263200 |
| Synthesized dimer: DGlcp(1-4)Subst // Subst = coniferyl alcohol = SMILES COC1=CC(/C=C/{9}CO)=C{3}C(O)={4}C1O Donor (ID 34839): ?DGlcp(1-P-P-5)xXnucU Acceptor (ID 34933): Subst // Subst = coniferyl alcohol = SMILES COC1=CC(/C=C/{9}CO)=C{3}C(O)={4}C1O Status: direct evidence in vivo
Confirmation methods: in vitro (purified protein), overexpression ID: 1140 Notes: NC: coniferin | Organism (ID 12415): Arabidopsis thaliana Organ/tissue: seedling, root, flower, silique Full structure (ID 27557): CSDB ID(s): 60811 | Lim et al. 2005b DOI: 10.1016/j.febslet.2005.04.016 Lanot et al. 2006 DOI: 10.1111/j.1365-313X.2006.02872.x Chu et al. 2014 DOI: 10.1016/j.phytochem.2014.03.003 | |
| Synthesized dimer: DGlcp(1-4)Sin Donor (ID 34839): ?DGlcp(1-P-P-5)xXnucU Acceptor (ID 34945): xXSin Status: evidence in vitro
Confirmation methods: in vitro (purified protein) ID: 1141 | Organism (ID 12415): Arabidopsis thaliana Organ/tissue: seedling, root, flower, silique Full structure (ID 34946): | Lim et al. 2005b DOI: 10.1016/j.febslet.2005.04.016 Lanot et al. 2006 DOI: 10.1111/j.1365-313X.2006.02872.x Lim et al. 2001 DOI: 10.1074/jbc.M007263200 | |
| Synthesized dimer: DGlcp(1-6)Subst // Subst = esculetin Donor (ID 34839): ?DGlcp(1-P-P-5)xXnucU Acceptor (ID 34847): Subst // Subst = esculetin Status: evidence in vitro
Confirmation methods: in vitro (purified protein) ID: 1142 Notes: NC: esculin | Organism (ID 12415): Arabidopsis thaliana Organ/tissue: seedling, root, flower, silique Full structure (ID 34891): | Lim et al. 2003a DOI: 10.1093/glycob/cwg017 Lanot et al. 2006 DOI: 10.1111/j.1365-313X.2006.02872.x | |
| Synthesized dimer: DGlcp(1-7)Subst // Subst = scopoletin Donor (ID 34839): ?DGlcp(1-P-P-5)xXnucU Acceptor (ID 34849): Subst // Subst = scopoletin Status: evidence in vitro
Confirmation methods: in vitro (purified protein) ID: 1143 Notes: NC: scopolin | Organism (ID 12415): Arabidopsis thaliana Organ/tissue: seedling, root, flower, silique Full structure (ID 34850): | ||
| Enzyme name: 73B1 UniProt ID: Q8VZE9.1 CAZy family: GT1 Gene name: UGT73B1 / AT4G34138 Gene GenBank ID: 829561 | Synthesized dimer: bDGlcp(1-7)Quercetin Donor (ID 34839): ?DGlcp(1-P-P-5)xXnucU Acceptor (ID 34846): xXQuercetin Status: evidence in vitro
Confirmation methods: in vitro (purified protein) ID: 1144 | Organism (ID 12415): Arabidopsis thaliana Full structure (ID 20812): CSDB ID(s): 48671, 48907, 62907, 65980 | Lim et al. 2004 DOI: 10.1002/bit.20154 |
| Synthesized dimer: bDGlcp(1-3)Quercetin Donor (ID 34839): ?DGlcp(1-P-P-5)xXnucU Acceptor (ID 34846): xXQuercetin Status: evidence in vitro
Confirmation methods: in vitro (purified protein) ID: 1145 | Organism (ID 12415): Arabidopsis thaliana Organ/tissue: stem, leaf, flower, seedling, root Full structure (ID 19231): CSDB ID(s): 44612, 46693, 47475, 48669, 48941, 60081, 60203, 60273, 60908, 61152, 61413, 61821, 62231, 63006, 63205, 63329, 63829, 64121, 64673, 64772, 64781, 64887, 64953, 65376, 65396, 65565, 65724, 65828, 65928, 65944, 65954, 65977, 65989, 66185, 66208, 66350, 66379, 66413, 66519, 66554, 66580, 66938, 66944, 67032, 67190, 67294, 67570, 67580, 67607, 67635, 67646, 67720, 67766, 67864, 67926, 67995, 68004, 68170, 68616, 68651, 68741, 68865, 120586, 131302, 139116, 146361, 146591, 146662, 146676, 146799, 270704, 270775 | Lim et al. 2004 DOI: 10.1002/bit.20154 Langlois-Meurinne et al. 2005 DOI: 10.1104/pp.105.067223 Lim et al. 2006a DOI: 10.1007/BF03031161 Kim et al. 2006a DOI: 10.1271/bbb.60006 | |
| Synthesized dimer: DGlcp(1-7)Subst // Subst = esculetin Donor (ID 34839): ?DGlcp(1-P-P-5)xXnucU Acceptor (ID 34847): Subst // Subst = esculetin Status: evidence in vitro
Confirmation methods: in vitro (purified protein) ID: 1146 Notes: NC: cichoriin | Organism (ID 12415): Arabidopsis thaliana Organ/tissue: stem, leaf, flower, seedling, root Full structure (ID 34848): | Lim et al. 2003a DOI: 10.1093/glycob/cwg017 Langlois-Meurinne et al. 2005 DOI: 10.1104/pp.105.067223 Lim et al. 2006a DOI: 10.1007/BF03031161 | |
| Synthesized dimer: DGlcp(1-7)Subst // Subst = scopoletin Donor (ID 34839): ?DGlcp(1-P-P-5)xXnucU Acceptor (ID 34849): Subst // Subst = scopoletin Status: evidence in vitro
Confirmation methods: in vitro (purified protein) ID: 1147 Notes: NC: scopolin | Organism (ID 12415): Arabidopsis thaliana Organ/tissue: stem, leaf, flower, seedling, root Full structure (ID 34850): | ||
| Synthesized dimer: DGlcp(1-7)Subst // Subst = eriodictyol = SMILES O=C1C[C@H](OC2=C1{5}C(O)=C{7}C(O)=C2)C3=C{53}C(O)={54}C(O)C=C3 Donor (ID 34839): ?DGlcp(1-P-P-5)xXnucU Acceptor (ID 34949): Subst // Subst = eriodictyol = SMILES O=C1C[C@H](OC2=C1{5}C(O)=C{7}C(O)=C2)C3=C{53}C(O)={54}C(O)C=C3 Status: evidence in vitro
Confirmation methods: in vitro (purified protein) ID: 1148 | Organism (ID 12415): Arabidopsis thaliana Organ/tissue: stem, leaf, flower, seedling, root Full structure (ID 34950): | Langlois-Meurinne et al. 2005 DOI: 10.1104/pp.105.067223 Lim et al. 2006a DOI: 10.1007/BF03031161 Kim et al. 2006a DOI: 10.1271/bbb.60006 | |
| Synthesized dimer: DGlcp(1-7)Kaempferol Donor (ID 34839): ?DGlcp(1-P-P-5)xXnucU Acceptor (ID 34951): xXKaempferol Status: evidence in vitro
Confirmation methods: in vitro (purified protein) ID: 1149 | Organism (ID 12415): Arabidopsis thaliana Organ/tissue: stem, leaf, flower, seedling, root Full structure (ID 34952): | ||
| Synthesized dimer: DGlcp(1-7)Luteolin Donor (ID 34839): ?DGlcp(1-P-P-5)xXnucU Acceptor (ID 34871): xXLuteolin Status: evidence in vitro
Confirmation methods: in vitro (purified protein) ID: 1150 | Organism (ID 12415): Arabidopsis thaliana Organ/tissue: stem, leaf, flower, seedling, root Full structure (ID 34953): | ||
| Synthesized dimer: DGlcp(1-7)Subst // Subst = naringenin = SMILES O=C1CC(C2=CC={54}C(O)C=C2)OC3=C{7}C(O)={6}C{5}C(O)=C13 Donor (ID 34839): ?DGlcp(1-P-P-5)xXnucU Acceptor (ID 34954): Subst // Subst = naringenin = SMILES O=C1CC(C2=CC={54}C(O)C=C2)OC3=C{7}C(O)={6}C{5}C(O)=C13 Status: evidence in vitro
Confirmation methods: in vitro (purified protein) ID: 1151 | Organism (ID 12415): Arabidopsis thaliana Organ/tissue: stem, leaf, flower, seedling, root Full structure (ID 34955): | ||
| Synthesized dimer: DXylp(1-7)Subst // Subst = naringenin = SMILES O=C1CC(C2=CC={54}C(O)C=C2)OC3=C{7}C(O)={6}C{5}C(O)=C13 Donor (ID 34956): aDXylp(1-P-P-5)xXnucU Acceptor (ID 34954): Subst // Subst = naringenin = SMILES O=C1CC(C2=CC={54}C(O)C=C2)OC3=C{7}C(O)={6}C{5}C(O)=C13 Status: evidence in vitro
Confirmation methods: expression in E.coli (as whole-cell biocatalyst) ID: 1152 | Organism (ID 12415): Arabidopsis thaliana Expressed in: E. coli Full structure (ID 34957): | Simkhada et al. 2009 DOI: 10.1007/s10059-009-0135-7 | |
| Synthesized dimer: DGlcp(1-7)Apigenin Donor (ID 34839): ?DGlcp(1-P-P-5)xXnucU Acceptor (ID 34958): xXApigenin Status: evidence in vitro
Confirmation methods: in vitro (purified protein) ID: 1153 | Organism (ID 12415): Arabidopsis thaliana Organ/tissue: stem, leaf, flower, seedling, root Full structure (ID 34959): | Langlois-Meurinne et al. 2005 DOI: 10.1104/pp.105.067223 Lim et al. 2006a DOI: 10.1007/BF03031161 Kim et al. 2006a DOI: 10.1271/bbb.60006 | |
| Synthesized dimer: DGlcp(1-1)Subst // Subst = 2,4,5-trichlorophenol Donor (ID 34839): ?DGlcp(1-P-P-5)xXnucU Acceptor (ID 34851): Subst // Subst = 2,4,5-trichlorophenol Status: evidence in vitro
Confirmation methods: in vitro (crude extract) ID: 1154 | Organism (ID 12415): Arabidopsis thaliana Full structure (ID 34852): | Brazier-Hicks et al. 2007 DOI: 10.1073/pnas.0706421104 | |
| Synthesized dimer: DGlcp(1-1)Subst // Subst = 4-chlorothiophenol Donor (ID 34839): ?DGlcp(1-P-P-5)xXnucU Acceptor (ID 34855): Subst // Subst = 4-chlorothiophenol Status: evidence in vitro
Confirmation methods: in vitro (crude extract) ID: 1155 Notes: S-conjugating activity towards 4-chlorothiophenol | Organism (ID 12415): Arabidopsis thaliana Full structure (ID 34856): | ||
| Enzyme name: 73B2 UniProt ID: Q94C57.1 CAZy family: GT1 Gene name: UGT73B2 / At4g34135 Gene GenBank ID: 829560 | Synthesized dimer: bDGlcp(1-7)Quercetin Donor (ID 34839): ?DGlcp(1-P-P-5)xXnucU Acceptor (ID 34846): xXQuercetin Status: evidence in vitro
Confirmation methods: in vitro (purified protein) ID: 1156 | Organism (ID 12415): Arabidopsis thaliana Organ/tissue: leaf,root, flower ,seedling Full structure (ID 20812): CSDB ID(s): 48671, 48907, 62907, 65980 | Lim et al. 2004 DOI: 10.1002/bit.20154 Langlois-Meurinne et al. 2005 DOI: 10.1104/pp.105.067223 Lim et al. 2006a DOI: 10.1007/BF03031161 Kim et al. 2006b DOI: 10.1016/j.plantsci.2005.12.013 Willits et al. 2004 DOI: 10.1016/j.phytochem.2003.10.005 |
| Synthesized dimer: DGlcp(1-3)Quercetin Donor (ID 34839): ?DGlcp(1-P-P-5)xXnucU Acceptor (ID 34846): xXQuercetin Status: evidence in vitro
Confirmation methods: in vitro (purified protein) ID: 1157 Notes: Although the predominant activity was specific for the C-7 position, a 20-fold lower activity could also be identified for the C-3 position. | Organism (ID 12415): Arabidopsis thaliana Organ/tissue: leaf,root, flower ,seedling Full structure (ID 34960): | Langlois-Meurinne et al. 2005 DOI: 10.1104/pp.105.067223 Lim et al. 2006a DOI: 10.1007/BF03031161 Kim et al. 2006b DOI: 10.1016/j.plantsci.2005.12.013 Willits et al. 2004 DOI: 10.1016/j.phytochem.2003.10.005 | |
| Synthesized dimer: DGlcp(1-7)Subst // Subst = naringenin = SMILES O=C1CC(C2=CC={54}C(O)C=C2)OC3=C{7}C(O)={6}C{5}C(O)=C13 Donor (ID 34839): ?DGlcp(1-P-P-5)xXnucU Acceptor (ID 34954): Subst // Subst = naringenin = SMILES O=C1CC(C2=CC={54}C(O)C=C2)OC3=C{7}C(O)={6}C{5}C(O)=C13 Status: evidence in vitro
Confirmation methods: in vitro (purified protein) ID: 1158 | Organism (ID 12415): Arabidopsis thaliana Organ/tissue: leaf,root, flower ,seedling Full structure (ID 34955): | ||
| Synthesized dimer: DGlcp(1-7)Subst // Subst = eriodictyol = SMILES O=C1C[C@H](OC2=C1{5}C(O)=C{7}C(O)=C2)C3=C{53}C(O)={54}C(O)C=C3 Donor (ID 34839): ?DGlcp(1-P-P-5)xXnucU Acceptor (ID 34949): Subst // Subst = eriodictyol = SMILES O=C1C[C@H](OC2=C1{5}C(O)=C{7}C(O)=C2)C3=C{53}C(O)={54}C(O)C=C3 Status: evidence in vitro
Confirmation methods: in vitro (purified protein) ID: 1159 | Organism (ID 12415): Arabidopsis thaliana Organ/tissue: leaf,root, flower ,seedling Full structure (ID 34950): | Langlois-Meurinne et al. 2005 DOI: 10.1104/pp.105.067223 Lim et al. 2006a DOI: 10.1007/BF03031161 Kim et al. 2006b DOI: 10.1016/j.plantsci.2005.12.013 | |
| Synthesized dimer: DGlcp(1-7)Apigenin Donor (ID 34839): ?DGlcp(1-P-P-5)xXnucU Acceptor (ID 34958): xXApigenin Status: evidence in vitro
Confirmation methods: in vitro (purified protein) ID: 1160 | Organism (ID 12415): Arabidopsis thaliana Organ/tissue: leaf,root, flower ,seedling Full structure (ID 34959): | Langlois-Meurinne et al. 2005 DOI: 10.1104/pp.105.067223 Lim et al. 2006a DOI: 10.1007/BF03031161 Kim et al. 2006b DOI: 10.1016/j.plantsci.2005.12.013 Willits et al. 2004 DOI: 10.1016/j.phytochem.2003.10.005 | |
| Synthesized dimer: DGlcp(1-7)Luteolin Donor (ID 34839): ?DGlcp(1-P-P-5)xXnucU Acceptor (ID 34871): xXLuteolin Status: evidence in vitro
Confirmation methods: in vitro (purified protein) ID: 1161 | Organism (ID 12415): Arabidopsis thaliana Organ/tissue: leaf,root, flower ,seedling Full structure (ID 34953): | ||
| Synthesized dimer: DGlcp(1-7)Kaempferol Donor (ID 34839): ?DGlcp(1-P-P-5)xXnucU Acceptor (ID 34951): xXKaempferol Status: evidence in vitro
Confirmation methods: in vitro (purified protein) ID: 1162 | Organism (ID 12415): Arabidopsis thaliana Organ/tissue: leaf,root, flower ,seedling Full structure (ID 34952): | Langlois-Meurinne et al. 2005 DOI: 10.1104/pp.105.067223 Lim et al. 2006a DOI: 10.1007/BF03031161 Willits et al. 2004 DOI: 10.1016/j.phytochem.2003.10.005 | |
| Synthesized dimer: DGlcp(1-3)Kaempferol Donor (ID 34839): ?DGlcp(1-P-P-5)xXnucU Acceptor (ID 34951): xXKaempferol Status: evidence in vitro
Confirmation methods: in vitro (purified protein) ID: 1163 Notes: Although the predominant activity was specific for the C-7 position, a 15-fold lower activity could also be identified for the C-3 position. | Organism (ID 12415): Arabidopsis thaliana Organ/tissue: leaf,root, flower ,seedling Full structure (ID 34961): | Langlois-Meurinne et al. 2005 DOI: 10.1104/pp.105.067223 Lim et al. 2006a DOI: 10.1007/BF03031161 Kim et al. 2006b DOI: 10.1016/j.plantsci.2005.12.013 Willits et al. 2004 DOI: 10.1016/j.phytochem.2003.10.005 | |
| Synthesized dimer: DGlcp(1-7)Subst // Subst = esculetin Donor (ID 34839): ?DGlcp(1-P-P-5)xXnucU Acceptor (ID 34847): Subst // Subst = esculetin Status: evidence in vitro
Confirmation methods: in vitro (purified protein) ID: 1164 Notes: NC: cichoriin | Organism (ID 12415): Arabidopsis thaliana Organ/tissue: leaf,root, flower ,seedling Full structure (ID 34848): | Lim et al. 2003a DOI: 10.1093/glycob/cwg017 Langlois-Meurinne et al. 2005 DOI: 10.1104/pp.105.067223 Lim et al. 2006a DOI: 10.1007/BF03031161 Kim et al. 2006b DOI: 10.1016/j.plantsci.2005.12.013 | |
| Synthesized dimer: DGlcp(1-7)Subst // Subst = scopoletin Donor (ID 34839): ?DGlcp(1-P-P-5)xXnucU Acceptor (ID 34849): Subst // Subst = scopoletin Status: evidence in vitro
Confirmation methods: in vitro (purified protein) ID: 1165 Notes: NC: scopolin | Organism (ID 12415): Arabidopsis thaliana Organ/tissue: leaf,root, flower ,seedling Full structure (ID 34850): | ||
| Synthesized dimer: DGlcp(1-4)Subst // Subst = 4-hydroxylaminodinitrotoluene Donor (ID 34839): ?DGlcp(1-P-P-5)xXnucU Acceptor (ID 34962): Subst // Subst = 4-hydroxylaminodinitrotoluene Status: evidence in vitro
Confirmation methods: in vitro (purified protein) ID: 1166 Notes: Glc is linked via N-O bond. | Organism (ID 12415): Arabidopsis thaliana Organ/tissue: leaf,root, flower ,seedling Full structure (ID 34963): | Langlois-Meurinne et al. 2005 DOI: 10.1104/pp.105.067223 Lim et al. 2006a DOI: 10.1007/BF03031161 Kim et al. 2006b DOI: 10.1016/j.plantsci.2005.12.013 Gandia-Herrero et al. 2008 DOI: 10.1111/j.1365-313X.2008.03653.x | |
| Synthesized dimer: D1dGlcp(1C-3)Subst // Subst = 4-hydroxylaminodinitrotoluene Donor (ID 34839): ?DGlcp(1-P-P-5)xXnucU Acceptor (ID 34962): Subst // Subst = 4-hydroxylaminodinitrotoluene Status: evidence in vitro
Confirmation methods: in vitro (purified protein) ID: 1167 | Organism (ID 12415): Arabidopsis thaliana Organ/tissue: leaf,root, flower ,seedling Full structure (ID 34964): | ||
| Synthesized dimer: DGlcp(1-7)Subst // Subst = isorhamnetin = SMILES O{3}C1=C(C2=CC={54}C(O)C(OC)=C2)OC3=C({5}C(O)=C{7}C(O)=C3)C1=O Donor (ID 34839): ?DGlcp(1-P-P-5)xXnucU Acceptor (ID 34965): Subst // Subst = isorhamnetin = SMILES O{3}C1=C(C2=CC={54}C(O)C(OC)=C2)OC3=C({5}C(O)=C{7}C(O)=C3)C1=O Status: evidence in vitro
Confirmation methods: in vitro (purified protein) ID: 1168 Notes: Although the predominant activity was specific for the C-7 position, a 15-fold lower activity could also be identified for the C-3 position. | Organism (ID 12415): Arabidopsis thaliana Organ/tissue: leaf,root, flower ,seedling Full structure (ID 34966): | Langlois-Meurinne et al. 2005 DOI: 10.1104/pp.105.067223 Lim et al. 2006a DOI: 10.1007/BF03031161 Kim et al. 2006b DOI: 10.1016/j.plantsci.2005.12.013 Willits et al. 2004 DOI: 10.1016/j.phytochem.2003.10.005 | |
| Synthesized dimer: DGlcp(1-3)Subst // Subst = isorhamnetin = SMILES O{3}C1=C(C2=CC={54}C(O)C(OC)=C2)OC3=C({5}C(O)=C{7}C(O)=C3)C1=O Donor (ID 34839): ?DGlcp(1-P-P-5)xXnucU Acceptor (ID 34965): Subst // Subst = isorhamnetin = SMILES O{3}C1=C(C2=CC={54}C(O)C(OC)=C2)OC3=C({5}C(O)=C{7}C(O)=C3)C1=O Status: evidence in vitro
Confirmation methods: in vitro (purified protein) ID: 1169 Notes: Although the predominant activity was specific for the C-7 position, a 15-fold lower activity could also be identified for the C-3 position. | Organism (ID 12415): Arabidopsis thaliana Organ/tissue: leaf,root, flower ,seedling Full structure (ID 34967): | ||
| Synthesized dimer: DGlcp(1-7)Subst // Subst = quercitrin Donor (ID 34839): ?DGlcp(1-P-P-5)xXnucU Acceptor (ID 34968): aLRhap(1-3)Subst // Subst = quercitin Status: evidence in vitro
Confirmation methods: in vitro (purified protein) ID: 1170 Notes: Substrate common name: quercitrin | Organism (ID 12415): Arabidopsis thaliana Organ/tissue: leaf,root, flower ,seedling Full structure (ID 34969): | ||
| Synthesized dimer: DGlcp(1-7)Subst // Subst = isoquercitrin Donor (ID 34839): ?DGlcp(1-P-P-5)xXnucU Acceptor (ID 34970): bDGlcp(1-3)Subst // Subst = quercitin Status: evidence in vitro
Confirmation methods: in vitro (purified protein) ID: 1171 Notes: Substrate common name: isoquercitrin | Organism (ID 12415): Arabidopsis thaliana Organ/tissue: leaf,root, flower ,seedling Full structure (ID 34971): | ||
| Synthesized dimer: DGlcp(1-7)Quercetin Donor (ID 34839): ?DGlcp(1-P-P-5)xXnucU Acceptor (ID 34972): aLRhap(1-6)bDGlcp(1-3)xXQuercetin Status: evidence in vitro
Confirmation methods: in vitro (purified protein) ID: 1172 Notes: NC: rutin (substrate) | Organism (ID 12415): Arabidopsis thaliana Organ/tissue: leaf,root, flower ,seedling Full structure (ID 34973): | ||
| Synthesized dimer: DGlcp(1-7)Subst // Subst = taxifolin Donor (ID 34839): ?DGlcp(1-P-P-5)xXnucU Acceptor (ID 34974): Subst // Subst = taxifolin Status: evidence in vitro
Confirmation methods: in vitro (purified protein) ID: 1173 | Organism (ID 12415): Arabidopsis thaliana Organ/tissue: leaf,root, flower ,seedling Full structure (ID 34975): | ||
| Synthesized dimer: DGlcp(1-7)Subst // Subst = hesperetin = SMILES O=C(C1=C(O/2)C={7}C(O)C={5}C1O)CC2=C3C={54}C(C(OC)=CC/3)O Donor (ID 34839): ?DGlcp(1-P-P-5)xXnucU Acceptor (ID 34976): Subst // Subst = hesperetin = SMILES O=C(C1=C(O/2)C={7}C(O)C={5}C1O)CC2=C3C={54}C(C(OC)=CC/3)O Status: evidence in vitro
Confirmation methods: in vitro (purified protein) ID: 1174 | Organism (ID 12415): Arabidopsis thaliana Organ/tissue: leaf,root, flower ,seedling Full structure (ID 34977): | ||
| Synthesized dimer: DGlcp(1-7)Subst // Subst = genistein = SMILES O=C1C(C2=CC={54}C(O)C=C2)=COC3=C1{5}C(O)={6}C{7}C(O)={8}C3 Donor (ID 34839): ?DGlcp(1-P-P-5)xXnucU Acceptor (ID 34978): Subst // Subst = genistein = SMILES O=C1C(C2=CC={54}C(O)C=C2)=COC3=C1{5}C(O)={6}C{7}C(O)={8}C3 Status: evidence in vitro
Confirmation methods: in vitro (purified protein) ID: 1175 | Organism (ID 12415): Arabidopsis thaliana Organ/tissue: leaf,root, flower ,seedling Full structure (ID 26203): CSDB ID(s): 131328 | ||
| Synthesized dimer: DGlcp(1-7)Subst // Subst = daidzein = SMILES O=C1C(C2=CC={54}C(O)C=C2)=COC3=C1C=C{7}C(O)={8}C3 Donor (ID 34839): ?DGlcp(1-P-P-5)xXnucU Acceptor (ID 34979): Subst // Subst = daidzein = SMILES O=C1C(C2=CC={54}C(O)C=C2)=COC3=C1C=C{7}C(O)={8}C3 Status: evidence in vitro
Confirmation methods: in vitro (purified protein) ID: 1176 | Organism (ID 12415): Arabidopsis thaliana Organ/tissue: leaf,root, flower ,seedling Full structure (ID 26200): CSDB ID(s): 131327 | ||
| Synthesized dimer: DGlcp(1-4)Subst // Subst = isoliquiritigenin = SMILES O=C(C(C=C{54}C(O)=C1)={52}C1O)/C=C/C2=CC={4}C(O)C=C2 Donor (ID 34839): ?DGlcp(1-P-P-5)xXnucU Acceptor (ID 34980): Subst // Subst = isoliquiritigenin = SMILES O=C(C(C=C{54}C(O)=C1)={52}C1O)/C=C/C2=CC={4}C(O)C=C2 Status: evidence in vitro
Confirmation methods: in vitro (purified protein) ID: 1177 | Organism (ID 12415): Arabidopsis thaliana Organ/tissue: leaf,root, flower ,seedling Full structure (ID 34981): | ||
| Synthesized dimer: DGlcp(1-1)Subst // Subst = 2,4,5-trichlorophenol Donor (ID 34839): ?DGlcp(1-P-P-5)xXnucU Acceptor (ID 34851): Subst // Subst = 2,4,5-trichlorophenol Status: evidence in vitro
Confirmation methods: in vitro (crude extract) ID: 1178 | Organism (ID 12415): Arabidopsis thaliana Full structure (ID 34852): | Brazier-Hicks et al. 2007 DOI: 10.1073/pnas.0706421104 | |
| Synthesized dimer: DGlcp(1-1)Subst // Subst = 4-chlorothiophenol Donor (ID 34839): ?DGlcp(1-P-P-5)xXnucU Acceptor (ID 34855): Subst // Subst = 4-chlorothiophenol Status: evidence in vitro
Confirmation methods: in vitro (crude extract) ID: 1179 Notes: S-conjugating activity towards 4-chlorothiophenol | Organism (ID 12415): Arabidopsis thaliana Full structure (ID 34856): | ||
| Enzyme name: 73B3 UniProt ID: Q8W491.1 CAZy family: GT1 Gene name: UGT73B3 / AT4G34131 Gene GenBank ID: 829559 | Synthesized dimer: DGlcp(1-4)Prcat Donor (ID 34839): ?DGlcp(1-P-P-5)xXnucU Acceptor (ID 34840): xXPrcat // Prcat = 3,4-dihydroxybenzoic (protocatechuic) acid Status: evidence in vitro
Confirmation methods: in vitro (purified protein) ID: 1180 | Organism (ID 12415): Arabidopsis thaliana Organ/tissue: root, leaf, stem, flower Full structure (ID 34841): | Lim et al. 2002 DOI: 10.1074/jbc.M109287200 Langlois-Meurinne et al. 2005 DOI: 10.1104/pp.105.067223 |
| Synthesized dimer: DGlcp(1-4)4HOBz Donor (ID 34839): ?DGlcp(1-P-P-5)xXnucU Acceptor (ID 34982): xX4HOBz // 4HOBz = 4-hydroxybenzoic (p-hydroxybenzoic) acidz Status: evidence in vitro
Confirmation methods: in vitro (purified protein) ID: 1181 | Organism (ID 12415): Arabidopsis thaliana Organ/tissue: root, leaf, stem, flower Full structure (ID 34983): | ||
| Synthesized dimer: DGlcp(1-4)bRes Donor (ID 34839): ?DGlcp(1-P-P-5)xXnucU Acceptor (ID 34842): xXbRes // bRes = 2,4-dihydroxybenzoic (beta-resorcyclic) acid Status: evidence in vitro
Confirmation methods: in vitro (purified protein) ID: 1182 | Organism (ID 12415): Arabidopsis thaliana Organ/tissue: root, leaf, stem, flower Full structure (ID 34843): | ||
| Synthesized dimer: DGlcp(1-5)Gent Donor (ID 34839): ?DGlcp(1-P-P-5)xXnucU Acceptor (ID 34844): xXGent // Gent = 2,5-dihydroxybenzoic (gentisic) acid Status: evidence in vitro
Confirmation methods: in vitro (purified protein) ID: 1183 | Organism (ID 12415): Arabidopsis thaliana Organ/tissue: root, leaf, stem, flower Full structure (ID 34845): | ||
| Synthesized dimer: DGlcp(1-3)Quercetin Donor (ID 34839): ?DGlcp(1-P-P-5)xXnucU Acceptor (ID 34846): xXQuercetin Status: evidence in vitro
Confirmation methods: in vitro (purified protein), expression in E.coli (as whole-cell biocatalyst) ID: 1184 | Organism (ID 12415): Arabidopsis thaliana Expressed in: E. coli; root, leaf, stem, flower Full structure (ID 34960): | Lim et al. 2004 DOI: 10.1002/bit.20154 Langlois-Meurinne et al. 2005 DOI: 10.1104/pp.105.067223 | |
| Synthesized dimer: DGlcp(1-7)Subst // Subst = esculetin Donor (ID 34839): ?DGlcp(1-P-P-5)xXnucU Acceptor (ID 34847): Subst // Subst = esculetin Status: evidence in vitro
Confirmation methods: in vitro (purified protein) ID: 1185 Notes: NC: cichoriin | Organism (ID 12415): Arabidopsis thaliana Organ/tissue: root, leaf, stem, flower Full structure (ID 34848): | Lim et al. 2003a DOI: 10.1093/glycob/cwg017 Langlois-Meurinne et al. 2005 DOI: 10.1104/pp.105.067223 | |
| Synthesized dimer: DGlcp(1-7)Subst // Subst = scopoletin Donor (ID 34839): ?DGlcp(1-P-P-5)xXnucU Acceptor (ID 34849): Subst // Subst = scopoletin Status: evidence in vitro
Confirmation methods: in vitro (purified protein) ID: 1186 Notes: NC: scopolin | Organism (ID 12415): Arabidopsis thaliana Organ/tissue: root, leaf, stem, flower Full structure (ID 34850): | ||
| Synthesized dimer: DGlcp(1-1)Subst // Subst = 2,4,5-trichlorophenol Donor (ID 34839): ?DGlcp(1-P-P-5)xXnucU Acceptor (ID 34851): Subst // Subst = 2,4,5-trichlorophenol Status: evidence in vitro
Confirmation methods: in vitro (crude extract) ID: 1187 | Organism (ID 12415): Arabidopsis thaliana Full structure (ID 34852): | Brazier-Hicks et al. 2007 DOI: 10.1073/pnas.0706421104 | |
| Synthesized dimer: DGlcp(1-1)Subst // Subst = 3,4-dichloroaniline Donor (ID 34839): ?DGlcp(1-P-P-5)xXnucU Acceptor (ID 34886): Subst // Subst = 3,4-dichloroaniline Status: evidence in vitro
Confirmation methods: in vitro (crude extract) ID: 1188 Notes: Low N-conjugating activity towards 3,4-dichloroaniline | Organism (ID 12415): Arabidopsis thaliana Full structure (ID 34887): | ||
| Synthesized dimer: DGlcp(1-1)Subst // Subst = 4-chlorothiophenol Donor (ID 34839): ?DGlcp(1-P-P-5)xXnucU Acceptor (ID 34855): Subst // Subst = 4-chlorothiophenol Status: evidence in vitro
Confirmation methods: in vitro (crude extract) ID: 1189 Notes: S-conjugating activity towards 4-chlorothiophenol | Organism (ID 12415): Arabidopsis thaliana Full structure (ID 34856): | ||
| Enzyme name: 73B4 UniProt ID: Q7Y232.1 CAZy family: GT1 Gene name: UGT73B4 / At2g15490 Gene GenBank ID: 816041 | Synthesized dimer: DGlcp(1-4)Prcat Donor (ID 34839): ?DGlcp(1-P-P-5)xXnucU Acceptor (ID 34840): xXPrcat // Prcat = 3,4-dihydroxybenzoic (protocatechuic) acid Status: evidence in vitro
Confirmation methods: in vitro (purified protein) ID: 1190 | Organism (ID 12415): Arabidopsis thaliana Organ/tissue: root Full structure (ID 34841): | Lim et al. 2002 DOI: 10.1074/jbc.M109287200 Langlois-Meurinne et al. 2005 DOI: 10.1104/pp.105.067223 |
| Synthesized dimer: DGlcp(1-3)Prcat Donor (ID 34839): ?DGlcp(1-P-P-5)xXnucU Acceptor (ID 34840): xXPrcat // Prcat = 3,4-dihydroxybenzoic (protocatechuic) acid Status: evidence in vitro
Confirmation methods: in vitro (purified protein) ID: 1191 | Organism (ID 12415): Arabidopsis thaliana Organ/tissue: root Full structure (ID 34890): | ||
| Synthesized dimer: DGlcp(1-4)4HOBz Donor (ID 34839): ?DGlcp(1-P-P-5)xXnucU Acceptor (ID 34982): xX4HOBz // 4HOBz = 4-hydroxybenzoic (p-hydroxybenzoic) acidz Status: evidence in vitro
Confirmation methods: in vitro (purified protein) ID: 1192 | Organism (ID 12415): Arabidopsis thaliana Organ/tissue: root Full structure (ID 34983): | ||
| Synthesized dimer: DGlcp(1-4)bRes Donor (ID 34839): ?DGlcp(1-P-P-5)xXnucU Acceptor (ID 34842): xXbRes // bRes = 2,4-dihydroxybenzoic (beta-resorcyclic) acid Status: evidence in vitro
Confirmation methods: in vitro (purified protein) ID: 1193 | Organism (ID 12415): Arabidopsis thaliana Organ/tissue: root Full structure (ID 34843): | ||
| Synthesized dimer: DGlcp(1-5)Gent Donor (ID 34839): ?DGlcp(1-P-P-5)xXnucU Acceptor (ID 34844): xXGent // Gent = 2,5-dihydroxybenzoic (gentisic) acid Status: evidence in vitro
Confirmation methods: in vitro (purified protein) ID: 1194 | Organism (ID 12415): Arabidopsis thaliana Organ/tissue: root Full structure (ID 34845): | ||
| Synthesized dimer: DGlcp(1-3)Quercetin Donor (ID 34839): ?DGlcp(1-P-P-5)xXnucU Acceptor (ID 34846): xXQuercetin Status: evidence in vitro
Confirmation methods: in vitro (purified protein) ID: 1195 | Organism (ID 12415): Arabidopsis thaliana Organ/tissue: root Full structure (ID 34960): | Lim et al. 2004 DOI: 10.1002/bit.20154 Langlois-Meurinne et al. 2005 DOI: 10.1104/pp.105.067223 | |
| Synthesized dimer: DGlcp(1-7)Quercetin Donor (ID 34839): ?DGlcp(1-P-P-5)xXnucU Acceptor (ID 34846): xXQuercetin Status: evidence in vitro
Confirmation methods: in vitro (purified protein) ID: 1196 | Organism (ID 12415): Arabidopsis thaliana Organ/tissue: root Full structure (ID 34984): | ||
| Synthesized dimer: DGlcp(1-6)Subst // Subst = esculetin Donor (ID 34839): ?DGlcp(1-P-P-5)xXnucU Acceptor (ID 34847): Subst // Subst = esculetin Status: evidence in vitro
Confirmation methods: in vitro (purified protein) ID: 1197 Notes: NC: esculin | Organism (ID 12415): Arabidopsis thaliana Organ/tissue: root Full structure (ID 34891): | Lim et al. 2003a DOI: 10.1093/glycob/cwg017 Langlois-Meurinne et al. 2005 DOI: 10.1104/pp.105.067223 | |
| Synthesized dimer: DGlcp(1-7)Subst // Subst = esculetin Donor (ID 34839): ?DGlcp(1-P-P-5)xXnucU Acceptor (ID 34847): Subst // Subst = esculetin Status: evidence in vitro
Confirmation methods: in vitro (purified protein) ID: 1198 Notes: NC: cichoriin | Organism (ID 12415): Arabidopsis thaliana Organ/tissue: root Full structure (ID 34848): | ||
| Synthesized dimer: DGlcp(1-7)Subst // Subst = scopoletin Donor (ID 34839): ?DGlcp(1-P-P-5)xXnucU Acceptor (ID 34849): Subst // Subst = scopoletin Status: evidence in vitro
Confirmation methods: in vitro (purified protein) ID: 1199 Notes: NC: scopolin | Organism (ID 12415): Arabidopsis thaliana Organ/tissue: root Full structure (ID 34850): | ||
| Synthesized dimer: DGlcp(1-2)Subst // Subst = 2-hydroxylaminodinitrotoluene Donor (ID 34839): ?DGlcp(1-P-P-5)xXnucU Acceptor (ID 34985): Subst // Subst = 2-hydroxylaminodinitrotoluene Status: evidence in vitro
Confirmation methods: in vitro (purified protein) ID: 1200 Notes: Glc is linked via N-O bond. | Organism (ID 12415): Arabidopsis thaliana Organ/tissue: root Full structure (ID 34986): | Langlois-Meurinne et al. 2005 DOI: 10.1104/pp.105.067223 Gandia-Herrero et al. 2008 DOI: 10.1111/j.1365-313X.2008.03653.x | |
| Synthesized dimer: DGlcp(1-4)Subst // Subst = 4-hydroxylaminodinitrotoluene Donor (ID 34839): ?DGlcp(1-P-P-5)xXnucU Acceptor (ID 34962): Subst // Subst = 4-hydroxylaminodinitrotoluene Status: evidence in vitro
Confirmation methods: in vitro (purified protein) ID: 1201 Notes: Glc is linked via N-O bond. | Organism (ID 12415): Arabidopsis thaliana Organ/tissue: root Full structure (ID 34963): | ||
| Synthesized dimer: D1dGlcp(1C-3)Subst // Subst = 4-hydroxylaminodinitrotoluene Donor (ID 34839): ?DGlcp(1-P-P-5)xXnucU Acceptor (ID 34962): Subst // Subst = 4-hydroxylaminodinitrotoluene Status: evidence in vitro
Confirmation methods: in vitro (purified protein) ID: 1202 | Organism (ID 12415): Arabidopsis thaliana Organ/tissue: root Full structure (ID 34964): | ||
| Synthesized dimer: DGlcp(1-1)Subst // Subst = 2,4,5-trichlorophenol Donor (ID 34839): ?DGlcp(1-P-P-5)xXnucU Acceptor (ID 34851): Subst // Subst = 2,4,5-trichlorophenol Status: evidence in vitro
Confirmation methods: in vitro (crude extract) ID: 1203 | Organism (ID 12415): Arabidopsis thaliana Full structure (ID 34852): | Brazier-Hicks et al. 2007 DOI: 10.1073/pnas.0706421104 | |
| Synthesized dimer: DGlcp(1-1)Subst // Subst = 4-chlorothiophenol Donor (ID 34839): ?DGlcp(1-P-P-5)xXnucU Acceptor (ID 34855): Subst // Subst = 4-chlorothiophenol Status: evidence in vitro
Confirmation methods: in vitro (crude extract) ID: 1204 Notes: Low S-conjugating activity towards 4-chlorothiophenol | Organism (ID 12415): Arabidopsis thaliana Full structure (ID 34856): | ||
| Enzyme name: 73B5 UniProt ID: Q9ZQG4.1 CAZy family: GT1 Gene name: UGT73B5 / At2g15480 Gene GenBank ID: 816040 | Synthesized dimer: DGlcp(1-3)Quercetin Donor (ID 34839): ?DGlcp(1-P-P-5)xXnucU Acceptor (ID 34846): xXQuercetin Status: evidence in vitro
Confirmation methods: in vitro (purified protein) ID: 1205 | Organism (ID 12415): Arabidopsis thaliana Organ/tissue: root, leaf, stem, flower Full structure (ID 34960): | Lim et al. 2004 DOI: 10.1002/bit.20154 Langlois-Meurinne et al. 2005 DOI: 10.1104/pp.105.067223 |
| Synthesized dimer: DGlcp(1-7)Subst // Subst = esculetin Donor (ID 34839): ?DGlcp(1-P-P-5)xXnucU Acceptor (ID 34847): Subst // Subst = esculetin Status: evidence in vitro
Confirmation methods: in vitro (purified protein) ID: 1206 Notes: NC: cichoriin | Organism (ID 12415): Arabidopsis thaliana Organ/tissue: root, leaf, stem, flower Full structure (ID 34848): | Lim et al. 2003a DOI: 10.1093/glycob/cwg017 Langlois-Meurinne et al. 2005 DOI: 10.1104/pp.105.067223 | |
| Synthesized dimer: DGlcp(1-7)Subst // Subst = scopoletin Donor (ID 34839): ?DGlcp(1-P-P-5)xXnucU Acceptor (ID 34849): Subst // Subst = scopoletin Status: evidence in vitro
Confirmation methods: in vitro (purified protein) ID: 1207 Notes: NC: scopolin | Organism (ID 12415): Arabidopsis thaliana Organ/tissue: root, leaf, stem, flower Full structure (ID 34850): | ||
| Synthesized dimer: DGlcp(1-2)Subst // Subst = 2-hydroxylaminodinitrotoluene Donor (ID 34839): ?DGlcp(1-P-P-5)xXnucU Acceptor (ID 34985): Subst // Subst = 2-hydroxylaminodinitrotoluene Status: evidence in vitro
Confirmation methods: in vitro (purified protein) ID: 1208 Notes: Glc is linked via N-O bond. | Organism (ID 12415): Arabidopsis thaliana Organ/tissue: root Full structure (ID 34986): | Langlois-Meurinne et al. 2005 DOI: 10.1104/pp.105.067223 Gandia-Herrero et al. 2008 DOI: 10.1111/j.1365-313X.2008.03653.x | |
| Synthesized dimer: DGlcp(1-4)Subst // Subst = 4-hydroxylaminodinitrotoluene Donor (ID 34839): ?DGlcp(1-P-P-5)xXnucU Acceptor (ID 34962): Subst // Subst = 4-hydroxylaminodinitrotoluene Status: evidence in vitro
Confirmation methods: in vitro (purified protein) ID: 1209 Notes: Glc is linked via N-O bond. | Organism (ID 12415): Arabidopsis thaliana Organ/tissue: root Full structure (ID 34963): | ||
| Synthesized dimer: D1dGlcp(1C-3)Subst // Subst = 4-hydroxylaminodinitrotoluene Donor (ID 34839): ?DGlcp(1-P-P-5)xXnucU Acceptor (ID 34962): Subst // Subst = 4-hydroxylaminodinitrotoluene Status: evidence in vitro
Confirmation methods: in vitro (purified protein) ID: 1210 | Organism (ID 12415): Arabidopsis thaliana Organ/tissue: root Full structure (ID 34964): | ||
| Synthesized dimer: DGlcp(1-1)Subst // Subst = 2,4,5-trichlorophenol Donor (ID 34839): ?DGlcp(1-P-P-5)xXnucU Acceptor (ID 34851): Subst // Subst = 2,4,5-trichlorophenol Status: evidence in vitro
Confirmation methods: in vitro (crude extract) ID: 1211 | Organism (ID 12415): Arabidopsis thaliana Full structure (ID 34852): | Brazier-Hicks et al. 2007 DOI: 10.1073/pnas.0706421104 | |
| Synthesized dimer: DGlcp(1-1)Subst // Subst = 4-chlorothiophenol Donor (ID 34839): ?DGlcp(1-P-P-5)xXnucU Acceptor (ID 34855): Subst // Subst = 4-chlorothiophenol Status: evidence in vitro
Confirmation methods: in vitro (crude extract) ID: 1212 Notes: Low S-conjugating activity towards 4-chlorothiophenol | Organism (ID 12415): Arabidopsis thaliana Full structure (ID 34856): | ||
| Enzyme name: 73C1 UniProt ID: Q9ZQ99.1 CAZy family: GT1 Gene name: UGT73C1 / At2g36750 Gene GenBank ID: 818247 | Synthesized dimer: DGlcp(1-13)Subst // Subst = trans-zeatin = SMILES C/C(=C\CNC1=NC=NC2=C1{7}NC=N2)/{13}CO Donor (ID 34839): ?DGlcp(1-P-P-5)xXnucU Acceptor (ID 34987): Subst // Subst = trans-zeatin = SMILES C/C(=C\CNC1=NC=NC2=C1{7}NC=N2)/{13}CO Status: evidence in vitro
Confirmation methods: in vitro (purified protein) ID: 1213 Notes: Glc is linked to terminal OH group. | Organism (ID 12415): Arabidopsis thaliana Organ/tissue: flower Full structure (ID 34988): | Langlois-Meurinne et al. 2005 DOI: 10.1104/pp.105.067223 Hou et al. 2004 DOI: 10.1074/jbc.M409569200 |
| Synthesized dimer: DGlcp(1-13)Subst // Subst = dihydrozeatin = SMILES C/C(CCNC1=NC=NC2=C1{7}NC=N2)/{13}CO Donor (ID 34839): ?DGlcp(1-P-P-5)xXnucU Acceptor (ID 34989): Subst // Subst = dihydrozeatin = SMILES C/C(CCNC1=NC=NC2=C1{7}NC=N2)/{13}CO Status: evidence in vitro
Confirmation methods: in vitro (purified protein) ID: 1214 Notes: Glc is linked to terminal OH group. | Organism (ID 12415): Arabidopsis thaliana Organ/tissue: flower Full structure (ID 34990): | ||
| Synthesized dimer: DGlcp(1-14)Subst // Subst = cis-zeatin = SMILES C/C(=C/CNC1=NC=NC2=C1{7}NC=N2)/{14}CO Donor (ID 34839): ?DGlcp(1-P-P-5)xXnucU Acceptor (ID 34991): Subst // Subst = cis-zeatin = SMILES C/C(=C/CNC1=NC=NC2=C1{7}NC=N2)/{14}CO Status: evidence in vitro
Confirmation methods: in vitro (purified protein) ID: 1215 Notes: Glc is linked to terminal OH group. | Organism (ID 12415): Arabidopsis thaliana Organ/tissue: flower Full structure (ID 27620): CSDB ID(s): 60882, 60887 | ||
| Synthesized dimer: DGlcp(1-13)Subst // Subst = dihydrozeatin (9-protonated) = SMILES O{13}CC(C)CCNC1=C2{7}NC={9}[N+]([H])C2=NC=N1 Donor (ID 34839): ?DGlcp(1-P-P-5)xXnucU Acceptor (ID 34992): ?DGlc(1-9)Subst // Subst = dihydrozeatin (9-protonated) = SMILES O{13}CC(C)CCNC1=C2{7}NC={9}[N+]([H])C2=NC=N1 Status: evidence in vitro
Confirmation methods: in vitro (purified protein) ID: 1216 Notes: Glc is linked to terminal OH group. | Organism (ID 12415): Arabidopsis thaliana Organ/tissue: flower Full structure (ID 34993): | ||
| Synthesized dimer: DGlcp(1-20)Subst // Subst = olomoucine Donor (ID 34839): ?DGlcp(1-P-P-5)xXnucU Acceptor (ID 34994): Subst // Subst = olomoucine Status: evidence in vitro
Confirmation methods: in vitro (purified protein) ID: 1217 Notes: Glc is linked to terminal OH group. | Organism (ID 12415): Arabidopsis thaliana Organ/tissue: flower Full structure (ID 34995): | ||
| Synthesized dimer: DGlcp(1-6)Subst // Subst = esculetin Donor (ID 34839): ?DGlcp(1-P-P-5)xXnucU Acceptor (ID 34847): Subst // Subst = esculetin Status: evidence in vitro
Confirmation methods: in vitro (purified protein) ID: 1218 Notes: NC: esculin | Organism (ID 12415): Arabidopsis thaliana Organ/tissue: flower Full structure (ID 34891): | Lim et al. 2003a DOI: 10.1093/glycob/cwg017 Langlois-Meurinne et al. 2005 DOI: 10.1104/pp.105.067223 | |
| Synthesized dimer: DGlcp(1-7)Subst // Subst = esculetin Donor (ID 34839): ?DGlcp(1-P-P-5)xXnucU Acceptor (ID 34847): Subst // Subst = esculetin Status: evidence in vitro
Confirmation methods: in vitro (purified protein) ID: 1219 Notes: NC: cichoriin | Organism (ID 12415): Arabidopsis thaliana Organ/tissue: flower Full structure (ID 34848): | ||
| Synthesized dimer: DGlcp(1-7)Subst // Subst = scopoletin Donor (ID 34839): ?DGlcp(1-P-P-5)xXnucU Acceptor (ID 34849): Subst // Subst = scopoletin Status: evidence in vitro
Confirmation methods: in vitro (purified protein) ID: 1220 Notes: NC: scopolin | Organism (ID 12415): Arabidopsis thaliana Organ/tissue: flower Full structure (ID 34850): | ||
| Synthesized dimer: DGlcp(1-2)Subst // Subst = 2-hydroxylaminodinitrotoluene Donor (ID 34839): ?DGlcp(1-P-P-5)xXnucU Acceptor (ID 34985): Subst // Subst = 2-hydroxylaminodinitrotoluene Status: evidence in vitro
Confirmation methods: in vitro (purified protein) ID: 1221 Notes: Glc is linked via N-O bond. | Organism (ID 12415): Arabidopsis thaliana Organ/tissue: flower Full structure (ID 34986): | Langlois-Meurinne et al. 2005 DOI: 10.1104/pp.105.067223 Gandia-Herrero et al. 2008 DOI: 10.1111/j.1365-313X.2008.03653.x | |
| Synthesized dimer: DGlcp(1-4)Subst // Subst = 4-hydroxylaminodinitrotoluene Donor (ID 34839): ?DGlcp(1-P-P-5)xXnucU Acceptor (ID 34962): Subst // Subst = 4-hydroxylaminodinitrotoluene Status: evidence in vitro
Confirmation methods: in vitro (purified protein) ID: 1222 Notes: Glc is linked via N-O bond. | Organism (ID 12415): Arabidopsis thaliana Organ/tissue: flower Full structure (ID 34963): | ||
| Synthesized dimer: D1dGlcp(1C-3)Subst // Subst = 4-hydroxylaminodinitrotoluene Donor (ID 34839): ?DGlcp(1-P-P-5)xXnucU Acceptor (ID 34962): Subst // Subst = 4-hydroxylaminodinitrotoluene Status: evidence in vitro
Confirmation methods: in vitro (purified protein) ID: 1223 | Organism (ID 12415): Arabidopsis thaliana Organ/tissue: flower Full structure (ID 34964): | ||
| Synthesized dimer: DGlcp(1-1)Subst // Subst = 2,4,5-trichlorophenol Donor (ID 34839): ?DGlcp(1-P-P-5)xXnucU Acceptor (ID 34851): Subst // Subst = 2,4,5-trichlorophenol Status: evidence in vitro
Confirmation methods: in vitro (crude extract) ID: 1224 | Organism (ID 12415): Arabidopsis thaliana Full structure (ID 34852): | Brazier-Hicks et al. 2007 DOI: 10.1073/pnas.0706421104 | |
| Synthesized dimer: DGlcp(1-1)Subst // Subst = 4-chlorothiophenol Donor (ID 34839): ?DGlcp(1-P-P-5)xXnucU Acceptor (ID 34855): Subst // Subst = 4-chlorothiophenol Status: evidence in vitro
Confirmation methods: in vitro (crude extract) ID: 1225 Notes: Low S-conjugating activity towards 4-chlorothiophenol | Organism (ID 12415): Arabidopsis thaliana Full structure (ID 34856): | ||
| Enzyme name: 73C2 UniProt ID: Q9ZQ98.1 CAZy family: GT1 Gene name: UGT73C2 / AT2G36760 Gene GenBank ID: 818248 | Synthesized dimer: DGlcp(1-1)Subst // Subst = 2,4,5-trichlorophenol Donor (ID 34839): ?DGlcp(1-P-P-5)xXnucU Acceptor (ID 34851): Subst // Subst = 2,4,5-trichlorophenol Status: evidence in vitro
Confirmation methods: in vitro (crude extract) ID: 1226 | Organism (ID 12415): Arabidopsis thaliana Full structure (ID 34852): | |
| Synthesized dimer: DGlcp(1-1)Subst // Subst = 3,4-dichloroaniline Donor (ID 34839): ?DGlcp(1-P-P-5)xXnucU Acceptor (ID 34886): Subst // Subst = 3,4-dichloroaniline Status: evidence in vitro
Confirmation methods: in vitro (crude extract) ID: 1227 Notes: Low N-conjugating activity towards 3,4-dichloroaniline | Organism (ID 12415): Arabidopsis thaliana Full structure (ID 34887): | ||
| Synthesized dimer: DGlcp(1-1)Subst // Subst = 4-chlorothiophenol Donor (ID 34839): ?DGlcp(1-P-P-5)xXnucU Acceptor (ID 34855): Subst // Subst = 4-chlorothiophenol Status: evidence in vitro
Confirmation methods: in vitro (crude extract) ID: 1228 Notes: Low S-conjugating activity towards 4-chlorothiophenol | Organism (ID 12415): Arabidopsis thaliana Full structure (ID 34856): | ||
| Enzyme name: 73C3 UniProt ID: Q9ZQ96.1 CAZy family: GT1 Gene name: AT2G36780 Gene GenBank ID: 818250 | Synthesized dimer: DGlcp(1-7)Subst // Subst = esculetin Donor (ID 34839): ?DGlcp(1-P-P-5)xXnucU Acceptor (ID 34847): Subst // Subst = esculetin Status: evidence in vitro
Confirmation methods: in vitro (purified protein) ID: 1229 Notes: NC: cichoriin | Organism (ID 12415): Arabidopsis thaliana Organ/tissue: leaf, flower Full structure (ID 34848): | Lim et al. 2003a DOI: 10.1093/glycob/cwg017 Langlois-Meurinne et al. 2005 DOI: 10.1104/pp.105.067223 |
| Synthesized dimer: DGlcp(1-7)Subst // Subst = scopoletin Donor (ID 34839): ?DGlcp(1-P-P-5)xXnucU Acceptor (ID 34849): Subst // Subst = scopoletin Status: evidence in vitro
Confirmation methods: in vitro (purified protein) ID: 1230 Notes: NC: scopolin | Organism (ID 12415): Arabidopsis thaliana Organ/tissue: leaf, flower Full structure (ID 34850): | ||
| Synthesized dimer: DGlcp(1-1)Subst // Subst = 2,4,5-trichlorophenol Donor (ID 34839): ?DGlcp(1-P-P-5)xXnucU Acceptor (ID 34851): Subst // Subst = 2,4,5-trichlorophenol Status: evidence in vitro
Confirmation methods: in vitro (crude extract) ID: 1231 | Organism (ID 12415): Arabidopsis thaliana Full structure (ID 34852): | Brazier-Hicks et al. 2007 DOI: 10.1073/pnas.0706421104 | |
| Synthesized dimer: DGlcp(1-1)Subst // Subst = 3,4-dichloroaniline Donor (ID 34839): ?DGlcp(1-P-P-5)xXnucU Acceptor (ID 34886): Subst // Subst = 3,4-dichloroaniline Status: evidence in vitro
Confirmation methods: in vitro (crude extract) ID: 1232 Notes: Low N-conjugating activity towards 3,4-dichloroaniline | Organism (ID 12415): Arabidopsis thaliana Full structure (ID 34887): | ||
| Synthesized dimer: DGlcp(1-1)Subst // Subst = 4-chlorothiophenol Donor (ID 34839): ?DGlcp(1-P-P-5)xXnucU Acceptor (ID 34855): Subst // Subst = 4-chlorothiophenol Status: evidence in vitro
Confirmation methods: in vitro (crude extract) ID: 1233 Notes: S-conjugating activity towards 4-chlorothiophenol | Organism (ID 12415): Arabidopsis thaliana Full structure (ID 34856): | ||
| Enzyme name: 73C4 UniProt ID: Q9ZQ97.1 CAZy family: GT1 Gene name: AT2G36770 Gene GenBank ID: 818249 | Synthesized dimer: DGlcp(1-7)Subst // Subst = esculetin Donor (ID 34839): ?DGlcp(1-P-P-5)xXnucU Acceptor (ID 34847): Subst // Subst = esculetin Status: evidence in vitro
Confirmation methods: in vitro (purified protein) ID: 1234 Notes: NC: cichoriin | Organism (ID 12415): Arabidopsis thaliana Full structure (ID 34848): | Lim et al. 2003a DOI: 10.1093/glycob/cwg017 |
| Synthesized dimer: DGlcp(1-7)Subst // Subst = scopoletin Donor (ID 34839): ?DGlcp(1-P-P-5)xXnucU Acceptor (ID 34849): Subst // Subst = scopoletin Status: evidence in vitro
Confirmation methods: in vitro (purified protein) ID: 1235 Notes: NC: scopolin | Organism (ID 12415): Arabidopsis thaliana Full structure (ID 34850): | ||
| Synthesized dimer: DGlcp(1-1)Subst // Subst = 2,4,5-trichlorophenol Donor (ID 34839): ?DGlcp(1-P-P-5)xXnucU Acceptor (ID 34851): Subst // Subst = 2,4,5-trichlorophenol Status: evidence in vitro
Confirmation methods: in vitro (crude extract) ID: 1236 | Organism (ID 12415): Arabidopsis thaliana Full structure (ID 34852): | Brazier-Hicks et al. 2007 DOI: 10.1073/pnas.0706421104 | |
| Synthesized dimer: DGlcp(1-1)Subst // Subst = 3,4-dichloroaniline Donor (ID 34839): ?DGlcp(1-P-P-5)xXnucU Acceptor (ID 34886): Subst // Subst = 3,4-dichloroaniline Status: evidence in vitro
Confirmation methods: in vitro (crude extract) ID: 1237 Notes: Low N-conjugating activity towards 3,4-dichloroaniline | Organism (ID 12415): Arabidopsis thaliana Full structure (ID 34887): | ||
| Synthesized dimer: DGlcp(1-1)Subst // Subst = 4-chlorothiophenol Donor (ID 34839): ?DGlcp(1-P-P-5)xXnucU Acceptor (ID 34855): Subst // Subst = 4-chlorothiophenol Status: evidence in vitro
Confirmation methods: in vitro (crude extract) ID: 1238 Notes: Low S-conjugating activity towards 4-chlorothiophenol | Organism (ID 12415): Arabidopsis thaliana Full structure (ID 34856): | ||
| Enzyme name: 73C5 UniProt ID: Q9ZQ94.1 CAZy family: GT1 Gene name: DOGT1 / At2g36800 Gene GenBank ID: 818252 | Synthesized dimer: DGlcp(1-7)Quercetin Donor (ID 34839): ?DGlcp(1-P-P-5)xXnucU Acceptor (ID 34846): xXQuercetin Status: evidence in vitro
Confirmation methods: in vitro (purified protein) ID: 1239 | Organism (ID 12415): Arabidopsis thaliana Full structure (ID 34984): | Lim et al. 2004 DOI: 10.1002/bit.20154 |
| Synthesized dimer: DGlcp(1-4')Quercetin Donor (ID 34839): ?DGlcp(1-P-P-5)xXnucU Acceptor (ID 34846): xXQuercetin Status: evidence in vitro
Confirmation methods: in vitro (purified protein) ID: 1240 | Organism (ID 12415): Arabidopsis thaliana Full structure (ID 34996): | ||
| Synthesized dimer: DGlcp(1-7)Subst // Subst = esculetin Donor (ID 34839): ?DGlcp(1-P-P-5)xXnucU Acceptor (ID 34847): Subst // Subst = esculetin Status: evidence in vitro
Confirmation methods: in vitro (purified protein) ID: 1241 Notes: NC: cichoriin | Organism (ID 12415): Arabidopsis thaliana Full structure (ID 34848): | Lim et al. 2003a DOI: 10.1093/glycob/cwg017 | |
| Synthesized dimer: DGlcp(1-7)Subst // Subst = scopoletin Donor (ID 34839): ?DGlcp(1-P-P-5)xXnucU Acceptor (ID 34849): Subst // Subst = scopoletin Status: evidence in vitro
Confirmation methods: in vitro (purified protein) ID: 1242 Notes: NC: scopolin | Organism (ID 12415): Arabidopsis thaliana Full structure (ID 34850): | ||
| Synthesized dimer: bDGlcp(1-3)Subst // Subst = 4-deoxynivalenol Donor (ID 34839): ?DGlcp(1-P-P-5)xXnucU Acceptor (ID 34997): Subst // Subst = 4-deoxynivalenol Status: evidence in vitro
Confirmation methods: in vitro (purified protein), expression in yeast (as whole-cell biocatalyst) ID: 1243 Notes: Expression is developmentally regulated and is induced by deoxynivalenol. | Organism (ID 12415): Arabidopsis thaliana Expressed in: S. cerevisiae Full structure (ID 34998): | Poppenberger et al. 2003 DOI: 10.1074/jbc.M307552200 | |
| Synthesized dimer: bDGlcp(1-3)Subst // Subst = 15-acetyl-4-deoxynivalenol Donor (ID 34839): ?DGlcp(1-P-P-5)xXnucU Acceptor (ID 34999): Subst // Subst = 15-acetyl-4-deoxynivalenol Status: evidence in vitro
Confirmation methods: expression in yeast (as whole-cell biocatalyst) ID: 1244 | Organism (ID 12415): Arabidopsis thaliana Expressed in: S. cerevisiae Full structure (ID 35000): | ||
| Synthesized dimer: DGlcp(1-23)Subst // Subst = brassinolide = SMILES O{3}[C@@H](C[C@]12[H]){2}[C@@H](C[C@]2(C)[C@@]3([H])CC[C@]4(C)[C@@H]([C@H](C){22}[C@H]({23}[C@@H]([C@H](C(C)C)C)O)O)CC[C@@]4([H])[C@]3([H])COC1=O)O Donor (ID 34839): ?DGlcp(1-P-P-5)xXnucU Acceptor (ID 35001): Subst // Subst = brassinolide = SMILES O{3}[C@@H](C[C@]12[H]){2}[C@@H](C[C@]2(C)[C@@]3([H])CC[C@]4(C)[C@@H]([C@H](C){22}[C@H]({23}[C@@H]([C@H](C(C)C)C)O)O)CC[C@@]4([H])[C@]3([H])COC1=O)O Status: indirect evidence in vivo
Confirmation methods: overexpression, mutation ID: 1245 | Organism (ID 12415): Arabidopsis thaliana Organ/tissue: elongating hypocotyl Full structure (ID 27558): CSDB ID(s): 60812, 60822 | Poppenberger et al. 2005 DOI: 10.1073/pnas.0504279102 | |
| Synthesized dimer: DGlcp(1-23)Subst // Subst = castasterone = SMILES C[C@H]({22}[C@@H](O){23}[C@H](O)[C@H](C(C)C)C)[C@H]1CC[C@@H]2[C@]1(C)CC[C@H]3[C@H]2CC([C@@H]4[C@]3(C)C{2}[C@@H](O){3}[C@@H](O)C4)=O Donor (ID 34839): ?DGlcp(1-P-P-5)xXnucU Acceptor (ID 35002): Subst // Subst = castasterone = SMILES C[C@H]({22}[C@@H](O){23}[C@H](O)[C@H](C(C)C)C)[C@H]1CC[C@@H]2[C@]1(C)CC[C@H]3[C@H]2CC([C@@H]4[C@]3(C)C{2}[C@@H](O){3}[C@@H](O)C4)=O Status: indirect evidence in vivo
Confirmation methods: overexpression ID: 1246 | Organism (ID 12415): Arabidopsis thaliana Organ/tissue: elongating hypocotyl Full structure (ID 27559): CSDB ID(s): 60813, 60823 | ||
| Synthesized dimer: DGlcp(1-13)Subst // Subst = trans-zeatin = SMILES C/C(=C\CNC1=NC=NC2=C1{7}NC=N2)/{13}CO Donor (ID 34839): ?DGlcp(1-P-P-5)xXnucU Acceptor (ID 34987): Subst // Subst = trans-zeatin = SMILES C/C(=C\CNC1=NC=NC2=C1{7}NC=N2)/{13}CO Status: evidence in vitro
Confirmation methods: in vitro (purified protein) ID: 1247 Notes: Glc is linked to terminal OH group. | Organism (ID 12415): Arabidopsis thaliana Full structure (ID 34988): | Hou et al. 2004 DOI: 10.1074/jbc.M409569200 | |
| Synthesized dimer: DGlcp(1-13)Subst // Subst = dihydrozeatin = SMILES C/C(CCNC1=NC=NC2=C1{7}NC=N2)/{13}CO Donor (ID 34839): ?DGlcp(1-P-P-5)xXnucU Acceptor (ID 34989): Subst // Subst = dihydrozeatin = SMILES C/C(CCNC1=NC=NC2=C1{7}NC=N2)/{13}CO Status: evidence in vitro
Confirmation methods: in vitro (purified protein) ID: 1248 Notes: Glc is linked to terminal OH group. | Organism (ID 12415): Arabidopsis thaliana Full structure (ID 34990): | ||
| Synthesized dimer: DGlcp(1-14)Subst // Subst = cis-zeatin = SMILES C/C(=C/CNC1=NC=NC2=C1{7}NC=N2)/{14}CO Donor (ID 34839): ?DGlcp(1-P-P-5)xXnucU Acceptor (ID 34991): Subst // Subst = cis-zeatin = SMILES C/C(=C/CNC1=NC=NC2=C1{7}NC=N2)/{14}CO Status: evidence in vitro
Confirmation methods: in vitro (purified protein) ID: 1249 Notes: Glc is linked to terminal OH group. | Organism (ID 12415): Arabidopsis thaliana Full structure (ID 27620): CSDB ID(s): 60882, 60887 | ||
| Synthesized dimer: DGlcp(1-13)Subst // Subst = dihydrozeatin (9-protonated) = SMILES O{13}CC(C)CCNC1=C2{7}NC={9}[N+]([H])C2=NC=N1 Donor (ID 34839): ?DGlcp(1-P-P-5)xXnucU Acceptor (ID 35003): ?DGlcp(1-9)Subst // Subst = dihydrozeatin (9-protonated) = SMILES O{13}CC(C)CCNC1=C2{7}NC={9}[N+]([H])C2=NC=N1 Status: evidence in vitro
Confirmation methods: in vitro (purified protein) ID: 1250 Notes: Glc is linked to terminal OH group. | Organism (ID 12415): Arabidopsis thaliana Full structure (ID 34993): | ||
| Synthesized dimer: DGlcp(1-20)Subst // Subst = olomoucine Donor (ID 34839): ?DGlcp(1-P-P-5)xXnucU Acceptor (ID 34994): Subst // Subst = olomoucine Status: evidence in vitro
Confirmation methods: in vitro (purified protein) ID: 1251 Notes: Glc is linked to terminal OH group. | Organism (ID 12415): Arabidopsis thaliana Full structure (ID 34995): | ||
| Synthesized dimer: DGlcp(1-1)Subst // Subst = 2,4,5-trichlorophenol Donor (ID 34839): ?DGlcp(1-P-P-5)xXnucU Acceptor (ID 34851): Subst // Subst = 2,4,5-trichlorophenol Status: evidence in vitro
Confirmation methods: in vitro (crude extract) ID: 1252 | Organism (ID 12415): Arabidopsis thaliana Full structure (ID 34852): | Brazier-Hicks et al. 2007 DOI: 10.1073/pnas.0706421104 | |
| Synthesized dimer: DGlcp(1-1)Subst // Subst = 3,4-dichloroaniline Donor (ID 34839): ?DGlcp(1-P-P-5)xXnucU Acceptor (ID 34886): Subst // Subst = 3,4-dichloroaniline Status: evidence in vitro
Confirmation methods: in vitro (crude extract) ID: 1253 Notes: N-conjugating activity towards 3,4-dichloroaniline | Organism (ID 12415): Arabidopsis thaliana Full structure (ID 34887): | ||
| Synthesized dimer: DGlcp(1-1)Subst // Subst = 4-chlorothiophenol Donor (ID 34839): ?DGlcp(1-P-P-5)xXnucU Acceptor (ID 34855): Subst // Subst = 4-chlorothiophenol Status: evidence in vitro
Confirmation methods: in vitro (crude extract) ID: 1254 Notes: S-conjugating activity towards 4-chlorothiophenol | Organism (ID 12415): Arabidopsis thaliana Full structure (ID 34856): | ||
| Synthesized dimer: bDGlcp(1-9)Subst // Subst = cinnamyl alcohol Donor (ID 34839): ?DGlcp(1-P-P-5)xXnucU Acceptor (ID 35004): Subst // Subst = cinnamic alcohol Status: evidence in vitro
Confirmation methods: expression in E.coli (as whole-cell biocatalyst) ID: 1255 Notes: Product common name: rosin. | Organism (ID 12415): Arabidopsis thaliana Expressed in: E. coli Full structure (ID 35005): | Zhou et al. 2017 DOI: 10.1021/acs.jafc.7b00076 Bi et al. 2019 DOI: 10.1021/acssynbio.9b00219 | |
| Enzyme name: 73C6 UniProt ID: Q9ZQ95.1 CAZy family: GT1 Gene name: UGT73C6 / At2g36790 Gene GenBank ID: 818251 | Synthesized dimer: DGlcp(1-7)Quercetin Donor (ID 34839): ?DGlcp(1-P-P-5)xXnucU Acceptor (ID 34846): xXQuercetin Status: evidence in vitro
Confirmation methods: in vitro (purified protein) ID: 1256 | Organism (ID 12415): Arabidopsis thaliana Organ/tissue: leaf, stem, flower Full structure (ID 34984): | Lim et al. 2004 DOI: 10.1002/bit.20154 Langlois-Meurinne et al. 2005 DOI: 10.1104/pp.105.067223 |
| Synthesized dimer: DGlcp(1-3)Quercetin Donor (ID 34839): ?DGlcp(1-P-P-5)xXnucU Acceptor (ID 34846): xXQuercetin Status: evidence in vitro
Confirmation methods: in vitro (purified protein) ID: 1257 | Organism (ID 12415): Arabidopsis thaliana Organ/tissue: leaf, stem, flower Full structure (ID 34960): | ||
| Synthesized dimer: DGlcp(1-4')Quercetin Donor (ID 34839): ?DGlcp(1-P-P-5)xXnucU Acceptor (ID 34846): xXQuercetin Status: evidence in vitro
Confirmation methods: in vitro (purified protein) ID: 1258 | Organism (ID 12415): Arabidopsis thaliana Organ/tissue: leaf, stem, flower Full structure (ID 34996): | ||
| Synthesized dimer: DGlcp(1-?)Quercetin Donor (ID 34839): ?DGlcp(1-P-P-5)xXnucU Acceptor (ID 35010): ?DGlcp(1-?)xXQuercetin Status: evidence in vitro
Confirmation methods: in vitro (crude extract) ID: 1259 | Organism (ID 12415): Arabidopsis thaliana Organ/tissue: leaf, stem, flower Full structure (ID 35011): | Langlois-Meurinne et al. 2005 DOI: 10.1104/pp.105.067223 Jones et al. 2003 DOI: 10.1074/jbc.M303523200 | |
| Synthesized dimer: DGlcp(1-7)Quercetin Donor (ID 34839): ?DGlcp(1-P-P-5)xXnucU Acceptor (ID 35012): ??Rhap(1-3)xXQuercetin Status: direct evidence in vivo
Confirmation methods: in vitro (crude extract), mutation ID: 1260 | Organism (ID 12415): Arabidopsis thaliana Organ/tissue: leaf, stem, flower Full structure (ID 27560): CSDB ID(s): 60814 | ||
| Synthesized dimer: DGlcp(1-7)Subst // Subst = esculetin Donor (ID 34839): ?DGlcp(1-P-P-5)xXnucU Acceptor (ID 34847): Subst // Subst = esculetin Status: evidence in vitro
Confirmation methods: in vitro (purified protein) ID: 1261 Notes: NC: cichoriin | Organism (ID 12415): Arabidopsis thaliana Organ/tissue: leaf, stem, flower Full structure (ID 34848): | Lim et al. 2003a DOI: 10.1093/glycob/cwg017 Langlois-Meurinne et al. 2005 DOI: 10.1104/pp.105.067223 | |
| Synthesized dimer: DGlcp(1-7)Subst // Subst = scopoletin Donor (ID 34839): ?DGlcp(1-P-P-5)xXnucU Acceptor (ID 34849): Subst // Subst = scopoletin Status: evidence in vitro
Confirmation methods: in vitro (purified protein) ID: 1262 Notes: NC: scopolin | Organism (ID 12415): Arabidopsis thaliana Organ/tissue: leaf, stem, flower Full structure (ID 34850): | ||
| Synthesized dimer: DGlcp(1-?)Kaempferol Donor (ID 34839): ?DGlcp(1-P-P-5)xXnucU Acceptor (ID 34951): xXKaempferol Status: evidence in vitro
Confirmation methods: in vitro (crude extract) ID: 1263 | Organism (ID 12415): Arabidopsis thaliana Organ/tissue: leaf, stem, flower Full structure (ID 35013): | Langlois-Meurinne et al. 2005 DOI: 10.1104/pp.105.067223 Jones et al. 2003 DOI: 10.1074/jbc.M303523200 | |
| Synthesized dimer: DGlcp(1-?)Kaempferol Donor (ID 34839): ?DGlcp(1-P-P-5)xXnucU Acceptor (ID 35014): ?DGlcp(1-?)xXKaempferol Status: evidence in vitro
Confirmation methods: in vitro (crude extract) ID: 1264 | Organism (ID 12415): Arabidopsis thaliana Organ/tissue: leaf, stem, flower Full structure (ID 35015): | ||
| Synthesized dimer: DGlcp(1-?)Kaempferol Donor (ID 34839): ?DGlcp(1-P-P-5)xXnucU Acceptor (ID 35016): ?DGlcp(1-3)xXKaempferol Status: evidence in vitro
Confirmation methods: in vitro (crude extract) ID: 1265 | Organism (ID 12415): Arabidopsis thaliana Organ/tissue: leaf, stem, flower Full structure (ID 35017): | ||
| Synthesized dimer: DGlcp(1-?)Apigenin Donor (ID 34839): ?DGlcp(1-P-P-5)xXnucU Acceptor (ID 34958): xXApigenin Status: evidence in vitro
Confirmation methods: in vitro (crude extract) ID: 1266 | Organism (ID 12415): Arabidopsis thaliana Organ/tissue: leaf, stem, flower Full structure (ID 35018): | ||
| Synthesized dimer: DGlcp(1-?)Apigenin Donor (ID 34839): ?DGlcp(1-P-P-5)xXnucU Acceptor (ID 35019): ?DGlcp(1-?)xXApigenin Status: evidence in vitro
Confirmation methods: in vitro (crude extract) ID: 1267 | Organism (ID 12415): Arabidopsis thaliana Organ/tissue: leaf, stem, flower Full structure (ID 35020): | ||
| Synthesized dimer: DGlcp(1-?)Apigenin Donor (ID 34839): ?DGlcp(1-P-P-5)xXnucU Acceptor (ID 35021): ?DGlcp(1-7)xXApigenin Status: evidence in vitro
Confirmation methods: in vitro (crude extract) ID: 1268 | Organism (ID 12415): Arabidopsis thaliana Organ/tissue: leaf, stem, flower Full structure (ID 35022): | ||
| Synthesized dimer: DGlcp(1-?)Subst // Subst = genistein = SMILES O=C1C(C2=CC={54}C(O)C=C2)=COC3=C1{5}C(O)={6}C{7}C(O)={8}C3 Donor (ID 34839): ?DGlcp(1-P-P-5)xXnucU Acceptor (ID 34978): Subst // Subst = genistein = SMILES O=C1C(C2=CC={54}C(O)C=C2)=COC3=C1{5}C(O)={6}C{7}C(O)={8}C3 Status: evidence in vitro
Confirmation methods: in vitro (crude extract) ID: 1269 | Organism (ID 12415): Arabidopsis thaliana Organ/tissue: leaf, stem, flower Full structure (ID 35023): | ||
| Synthesized dimer: DGlcp(1-6)Subst // Subst = 6-hydroxyflavone = SMILES O=C1C=C(OC2=C1C={6}C(O)C=C2)C3=CC=CC=C3 Donor (ID 34839): ?DGlcp(1-P-P-5)xXnucU Acceptor (ID 35024): Subst // Subst = 6-hydroxyflavone = SMILES O=C1C=C(OC2=C1C={6}C(O)C=C2)C3=CC=CC=C3 Status: evidence in vitro
Confirmation methods: in vitro (crude extract) ID: 1270 | Organism (ID 12415): Arabidopsis thaliana Organ/tissue: leaf, stem, flower Full structure (ID 35025): | ||
| Synthesized dimer: DGlcp(1-7)Subst // Subst = 7-hydroxyflavone = SMILES O=C1C=C(OC2=C1C=C{7}C(O)=C2)C3=CC=CC=C3 Donor (ID 34839): ?DGlcp(1-P-P-5)xXnucU Acceptor (ID 35026): Subst // Subst = 7-hydroxyflavone = SMILES O=C1C=C(OC2=C1C=C{7}C(O)=C2)C3=CC=CC=C3 Status: evidence in vitro
Confirmation methods: in vitro (crude extract) ID: 1271 | Organism (ID 12415): Arabidopsis thaliana Organ/tissue: leaf, stem, flower Full structure (ID 35027): | ||
| Synthesized dimer: DGlcp(1-?)Subst // Subst = chrysin = SMILES O=C1C=C(OC2=C1{5}C(O)=C{7}C(O)=C2)C3=CC=CC=C3 Donor (ID 34839): ?DGlcp(1-P-P-5)xXnucU Acceptor (ID 35028): Subst // Subst = chrysin = SMILES O=C1C=C(OC2=C1{5}C(O)=C{7}C(O)=C2)C3=CC=CC=C3 Status: evidence in vitro
Confirmation methods: in vitro (crude extract) ID: 1272 | Organism (ID 12415): Arabidopsis thaliana Organ/tissue: leaf, stem, flower Full structure (ID 35029): | ||
| Synthesized dimer: DGlcp(1-2)Subst // Subst = 2-hydroxylaminodinitrotoluene Donor (ID 34839): ?DGlcp(1-P-P-5)xXnucU Acceptor (ID 34985): Subst // Subst = 2-hydroxylaminodinitrotoluene Status: evidence in vitro
Confirmation methods: in vitro (purified protein) ID: 1273 Notes: Glc is linked via N-O bond. | Organism (ID 12415): Arabidopsis thaliana Organ/tissue: leaf, stem, flower Full structure (ID 34986): | Langlois-Meurinne et al. 2005 DOI: 10.1104/pp.105.067223 Gandia-Herrero et al. 2008 DOI: 10.1111/j.1365-313X.2008.03653.x | |
| Synthesized dimer: DGlcp(1-4)Subst // Subst = 4-hydroxylaminodinitrotoluene Donor (ID 34839): ?DGlcp(1-P-P-5)xXnucU Acceptor (ID 34962): Subst // Subst = 4-hydroxylaminodinitrotoluene Status: evidence in vitro
Confirmation methods: in vitro (purified protein) ID: 1274 Notes: Glc is linked via N-O bond. | Organism (ID 12415): Arabidopsis thaliana Organ/tissue: leaf, stem, flower Full structure (ID 34963): | ||
| Synthesized dimer: DGlcp(1-23)Subst // Subst = brassinolide = SMILES O{3}[C@@H](C[C@]12[H]){2}[C@@H](C[C@]2(C)[C@@]3([H])CC[C@]4(C)[C@@H]([C@H](C){22}[C@H]({23}[C@@H]([C@H](C(C)C)C)O)O)CC[C@@]4([H])[C@]3([H])COC1=O)O Donor (ID 34839): ?DGlcp(1-P-P-5)xXnucU Acceptor (ID 35001): Subst // Subst = brassinolide = SMILES O{3}[C@@H](C[C@]12[H]){2}[C@@H](C[C@]2(C)[C@@]3([H])CC[C@]4(C)[C@@H]([C@H](C){22}[C@H]({23}[C@@H]([C@H](C(C)C)C)O)O)CC[C@@]4([H])[C@]3([H])COC1=O)O Status: indirect evidence in vivo
Confirmation methods: overexpression ID: 1275 | Organism (ID 12415): Arabidopsis thaliana Organ/tissue: leaf, stem, flower Full structure (ID 27558): CSDB ID(s): 60812, 60822 | Langlois-Meurinne et al. 2005 DOI: 10.1104/pp.105.067223 Husar et al. 2011 DOI: 10.1186/1471-2229-11-51 | |
| Synthesized dimer: DGlcp(1-23)Subst // Subst = castasterone = SMILES C[C@H]({22}[C@@H](O){23}[C@H](O)[C@H](C(C)C)C)[C@H]1CC[C@@H]2[C@]1(C)CC[C@H]3[C@H]2CC([C@@H]4[C@]3(C)C{2}[C@@H](O){3}[C@@H](O)C4)=O Donor (ID 34839): ?DGlcp(1-P-P-5)xXnucU Acceptor (ID 35002): Subst // Subst = castasterone = SMILES C[C@H]({22}[C@@H](O){23}[C@H](O)[C@H](C(C)C)C)[C@H]1CC[C@@H]2[C@]1(C)CC[C@H]3[C@H]2CC([C@@H]4[C@]3(C)C{2}[C@@H](O){3}[C@@H](O)C4)=O Status: indirect evidence in vivo
Confirmation methods: overexpression ID: 1276 | Organism (ID 12415): Arabidopsis thaliana Organ/tissue: leaf, stem, flower Full structure (ID 27559): CSDB ID(s): 60813, 60823 | ||
| Synthesized dimer: bDGlcp(1-4)Subst // Subst = alpha-zearalenol Donor (ID 34839): ?DGlcp(1-P-P-5)xXnucU Acceptor (ID 35030): Subst // Subst = alpha-zearalenol Status: evidence in vitro
Confirmation methods: expression in yeast (as whole-cell biocatalyst) ID: 1277 | Organism (ID 12415): Arabidopsis thaliana Organ/tissue: S.cerevisiae; leaf, stem, flower Full structure (ID 35031): | Langlois-Meurinne et al. 2005 DOI: 10.1104/pp.105.067223 Poppenberger et al. 2006 DOI: 10.1128/AEM.02544-05 | |
| Synthesized dimer: bDGlcp(1-4)Subst // Subst = beta-zearalenol Donor (ID 34839): ?DGlcp(1-P-P-5)xXnucU Acceptor (ID 35032): Subst // Subst = beta-zearalenol Status: evidence in vitro
Confirmation methods: expression in yeast (as whole-cell biocatalyst) ID: 1278 | Organism (ID 12415): Arabidopsis thaliana Organ/tissue: S.cerevisiae; leaf, stem, flower Full structure (ID 35033): | ||
| Synthesized dimer: bDGlcp(1-4)Subst // Subst = zearalenone = SMILES C[C@H]1CCCC(CCC/C=C/C2=C{4}C(O)=C{2}C(O)=C2C(O1)=O)=O Donor (ID 34839): ?DGlcp(1-P-P-5)xXnucU Acceptor (ID 35034): Subst // Subst = zearalenone = SMILES C[C@H]1CCCC(CCC/C=C/C2=C{4}C(O)=C{2}C(O)=C2C(O1)=O)=O Status: evidence in vitro
Confirmation methods: expression in yeast (as whole-cell biocatalyst) ID: 1279 | Organism (ID 12415): Arabidopsis thaliana Organ/tissue: S.cerevisiae; leaf, stem, flower Full structure (ID 18644): CSDB ID(s): 44212, 45587, 50161, 50370, 50396 | ||
| Synthesized dimer: DGlcp(1-1)Subst // Subst = 2,4,5-trichlorophenol Donor (ID 34839): ?DGlcp(1-P-P-5)xXnucU Acceptor (ID 34851): Subst // Subst = 2,4,5-trichlorophenol Status: evidence in vitro
Confirmation methods: in vitro (crude extract) ID: 1280 | Organism (ID 12415): Arabidopsis thaliana Full structure (ID 34852): | Brazier-Hicks et al. 2007 DOI: 10.1073/pnas.0706421104 | |
| Synthesized dimer: DGlcp(1-1)Subst // Subst = 3,4-dichloroaniline Donor (ID 34839): ?DGlcp(1-P-P-5)xXnucU Acceptor (ID 34886): Subst // Subst = 3,4-dichloroaniline Status: evidence in vitro
Confirmation methods: in vitro (crude extract) ID: 1281 Notes: N-conjugating activity towards 3,4-dichloroaniline | Organism (ID 12415): Arabidopsis thaliana Full structure (ID 34887): | ||
| Synthesized dimer: DGlcp(1-1)Subst // Subst = 4-chlorothiophenol Donor (ID 34839): ?DGlcp(1-P-P-5)xXnucU Acceptor (ID 34855): Subst // Subst = 4-chlorothiophenol Status: evidence in vitro
Confirmation methods: in vitro (crude extract) ID: 1282 Notes: S-conjugating activity towards 4-chlorothiophenol | Organism (ID 12415): Arabidopsis thaliana Full structure (ID 34856): | ||
| Enzyme name: 73C7 UniProt ID: Q9SCP5.1 CAZy family: GT1 Gene name: UGT73C7 / AT3G53160 Gene GenBank ID: 824482 | Synthesized dimer: DGlcp(1-7)Subst // Subst = esculetin Donor (ID 34839): ?DGlcp(1-P-P-5)xXnucU Acceptor (ID 34847): Subst // Subst = esculetin Status: evidence in vitro
Confirmation methods: in vitro (purified protein) ID: 1283 Notes: NC: cichoriin | Organism (ID 12415): Arabidopsis thaliana Organ/tissue: flower Full structure (ID 34848): | Lim et al. 2003a DOI: 10.1093/glycob/cwg017 Langlois-Meurinne et al. 2005 DOI: 10.1104/pp.105.067223 |
| Synthesized dimer: DGlcp(1-6)Subst // Subst = esculetin Donor (ID 34839): ?DGlcp(1-P-P-5)xXnucU Acceptor (ID 34847): Subst // Subst = esculetin Status: evidence in vitro
Confirmation methods: in vitro (purified protein) ID: 1284 Notes: NC: esculin | Organism (ID 12415): Arabidopsis thaliana Organ/tissue: flower Full structure (ID 34891): | ||
| Enzyme name: 74B1 UniProt ID: O48676 CAZy family: GT1 Gene name: UGT74B1 / AT1G24100 Gene GenBank ID: 839022 | Synthesized dimer: DGlcp(1-7)Subst // Subst = esculetin Donor (ID 34839): ?DGlcp(1-P-P-5)xXnucU Acceptor (ID 34847): Subst // Subst = esculetin Status: evidence in vitro
Confirmation methods: in vitro (purified protein) ID: 1285 Notes: NC: cichoriin | Organism (ID 12415): Arabidopsis thaliana Organ/tissue: leaf, silique, stem, root Full structure (ID 34848): | Lim et al. 2003a DOI: 10.1093/glycob/cwg017 Grubb et al. 2004 DOI: 10.1111/j.1365-313X.2004.02261.x |
| Synthesized dimer: bDGlcp(1-1')Subst // Subst = phenylacetothiohydroximate = SMILES {151}O/N=C({51}S)/CC1=CC=CC=C1 Donor (ID 34898): aDGlcp(1-P-P-5)xXnucU Acceptor (ID 35035): Subst // Subst = phenylacetothiohydroximate = SMILES {151}O/N=C({51}S)/CC1=CC=CC=C1 Status: evidence in vitro
Confirmation methods: in vitro (purified protein) ID: 1286 | Organism (ID 12415): Arabidopsis thaliana Full structure (ID 35036): | Marroun et al. 2016 DOI: 10.1039/c6ob01003b | |
| Synthesized dimer: bDGlcp(1-1')Subst // Subst = benzylacetothiohydroximate = SMILES {151}O/N=C({51}S)/CCC1=CC=CC=C1 Donor (ID 34898): aDGlcp(1-P-P-5)xXnucU Acceptor (ID 35037): Subst // Subst = benzylacetothiohydroximate = SMILES {151}O/N=C({51}S)/CCC1=CC=CC=C1 Status: evidence in vitro
Confirmation methods: in vitro (purified protein) ID: 1287 | Organism (ID 12415): Arabidopsis thaliana Full structure (ID 35038): | ||
| Synthesized dimer: bDGalp(1-1')Subst // Subst = phenylacetothiohydroximate = SMILES {151}O/N=C({51}S)/CC1=CC=CC=C1 Donor (ID 35039): aDGalp(1-P-P-5)xXnucU Acceptor (ID 35035): Subst // Subst = phenylacetothiohydroximate = SMILES {151}O/N=C({51}S)/CC1=CC=CC=C1 Status: evidence in vitro
Confirmation methods: in vitro (purified protein) ID: 1288 Notes: minor activity | Organism (ID 12415): Arabidopsis thaliana Full structure (ID 35040): | ||
| Synthesized dimer: bDGlcpN(1-1')Subst // Subst = phenylacetothiohydroximate = SMILES {151}O/N=C({51}S)/CC1=CC=CC=C1 Donor (ID 35041): Ac(1-2)aDGlcpN(1-P-P-5)xXnucU Acceptor (ID 35035): Subst // Subst = phenylacetothiohydroximate = SMILES {151}O/N=C({51}S)/CC1=CC=CC=C1 Status: evidence in vitro
Confirmation methods: in vitro (purified protein) ID: 1289 Notes: minor activity | Organism (ID 12415): Arabidopsis thaliana Full structure (ID 35042): | ||
| Synthesized dimer: DGlcp(1-1')Subst // Subst = phenylacetothiohydroximate = SMILES {151}O/N=C({51}S)/CC1=CC=CC=C1 Donor (ID 34839): ?DGlcp(1-P-P-5)xXnucU Acceptor (ID 35035): Subst // Subst = phenylacetothiohydroximate = SMILES {151}O/N=C({51}S)/CC1=CC=CC=C1 Status: direct evidence in vivo
Confirmation methods: in vitro (purified protein), in vitro (crude extract), mutation, mutation (in vitro) ID: 1290 Notes: Glc C1 is linked to S atom at -C(=NOH)S. | Organism (ID 12415): Arabidopsis thaliana Organ/tissue: leaf, silique, stem, root Full structure (ID 27572): CSDB ID(s): 60826 | Grubb et al. 2004 DOI: 10.1111/j.1365-313X.2004.02261.x Grubb et al. 2014 DOI: 10.1111/tpj.12541 Kopycki et al. 2013 DOI: 10.1042/BJ20121403 Latife et al. 2019 DOI: 10.1016/j.mcat.2019.110631 | |
| Synthesized dimer: DGlcp(1-1')Subst // Subst = 1-methylindolyl-3-acetothiohydroximate Donor (ID 34839): ?DGlcp(1-P-P-5)xXnucU Acceptor (ID 35043): Subst // Subst = 1-methylindolyl-3-acetothiohydroximate Status: evidence in vitro
Confirmation methods: in vitro (purified protein), in vitro (crude extract) ID: 1291 Notes: Glc C1 is linked to S atom at -C(=NOH)S. | Organism (ID 12415): Arabidopsis thaliana Organ/tissue: leaf, silique, stem, root Full structure (ID 35044): | Grubb et al. 2004 DOI: 10.1111/j.1365-313X.2004.02261.x Grubb et al. 2014 DOI: 10.1111/tpj.12541 | |
| Synthesized dimer: DGlcp(1-1')Subst // Subst = 4-methylthiobutylthiohydroximate Donor (ID 34839): ?DGlcp(1-P-P-5)xXnucU Acceptor (ID 35045): Subst // Subst = 4-methylthiobutylthiohydroximate Status: evidence in vitro
Confirmation methods: in vitro (purified protein), in vitro (crude extract) ID: 1292 Notes: Glc C1 is linked to S atom at -C(=NOH)S. | Organism (ID 12415): Arabidopsis thaliana Organ/tissue: leaf, silique, stem, root Full structure (ID 35046): | ||
| Synthesized dimer: DGlcp(1-1)Subst // Subst = 2,4,5-trichlorophenol Donor (ID 34839): ?DGlcp(1-P-P-5)xXnucU Acceptor (ID 34851): Subst // Subst = 2,4,5-trichlorophenol Status: evidence in vitro
Confirmation methods: in vitro (purified protein), in vitro (crude extract) ID: 1293 | Organism (ID 12415): Arabidopsis thaliana Full structure (ID 34852): | Brazier-Hicks et al. 2007 DOI: 10.1073/pnas.0706421104 Latife et al. 2019 DOI: 10.1016/j.mcat.2019.110631 | |
| Synthesized dimer: DGlcp(1-1)Subst // Subst = 4-chlorothiophenol Donor (ID 34839): ?DGlcp(1-P-P-5)xXnucU Acceptor (ID 34855): Subst // Subst = 4-chlorothiophenol Status: evidence in vitro
Confirmation methods: in vitro (purified protein), in vitro (crude extract) ID: 1294 Notes: S-conjugating activity towards 4-chlorothiophenol | Organism (ID 12415): Arabidopsis thaliana Full structure (ID 34856): | ||
| Enzyme name: 74C1 UniProt ID: Q9SKC1.1 CAZy family: GT1 Gene name: AT2G31790 Gene GenBank ID: 817736 | Synthesized dimer: DGlcp(1-1')Subst // Subst = phenylacetothiohydroximate = SMILES {151}O/N=C({51}S)/CC1=CC=CC=C1 Donor (ID 34839): ?DGlcp(1-P-P-5)xXnucU Acceptor (ID 35035): Subst // Subst = phenylacetothiohydroximate = SMILES {151}O/N=C({51}S)/CC1=CC=CC=C1 Status: evidence in vitro
Confirmation methods: in vitro (purified protein) ID: 1295 Notes: Glc C1 is linked to S atom at -C(=NOH)S. | Organism (ID 12415): Arabidopsis thaliana Full structure (ID 27572): CSDB ID(s): 60826 | Grubb et al. 2014 DOI: 10.1111/tpj.12541 |
| Enzyme name: 74D1 UniProt ID: Q9SKC5.1 CAZy family: GT1 Gene name: UGT74D1 / AT2G31750 Gene GenBank ID: 817732 | Synthesized dimer: DGlcp(1-1')Subst // Subst = phenylacetothiohydroximate = SMILES {151}O/N=C({51}S)/CC1=CC=CC=C1 Donor (ID 34839): ?DGlcp(1-P-P-5)xXnucU Acceptor (ID 35035): Subst // Subst = phenylacetothiohydroximate = SMILES {151}O/N=C({51}S)/CC1=CC=CC=C1 Status: evidence in vitro
Confirmation methods: in vitro (purified protein) ID: 1296 Notes: Glc C1 is linked to S atom at -C(=NOH)S. | Organism (ID 12415): Arabidopsis thaliana Organ/tissue: leaf Full structure (ID 27572): CSDB ID(s): 60826 | Grubb et al. 2014 DOI: 10.1111/tpj.12541 Song et al. 2005 DOI: 10.1007/BF03030584 |
| Synthesized dimer: bDGlcp(1-13)Subst // Subst = hormodin = SMILES O={13}C(O)CCCC1=CNC2=C1C=CC=C2 Donor (ID 34839): ?DGlcp(1-P-P-5)xXnucU Acceptor (ID 35061): Subst // Subst = hormodin = SMILES O={13}C(O)CCCC1=CNC2=C1C=CC=C2 Status: evidence in vitro
Confirmation methods: in vitro (purified protein) ID: 1297 | Organism (ID 12415): Arabidopsis thaliana Organ/tissue: leaf Full structure (ID 27583): CSDB ID(s): 60839, 60841 | Song et al. 2005 DOI: 10.1007/BF03030584 Jin et al. 2013a DOI: 10.1371/journal.pone.0061705 | |
| Synthesized dimer: bDGlcp(1-12)Subst // Subst = indole-3-propionate Donor (ID 34839): ?DGlcp(1-P-P-5)xXnucU Acceptor (ID 35062): Subst // Subst = indole-3-propionic acid Status: evidence in vitro
Confirmation methods: in vitro (purified protein) ID: 1298 | Organism (ID 12415): Arabidopsis thaliana Organ/tissue: leaf Full structure (ID 35063): | ||
| Synthesized dimer: bDGlcp(1-11)Subst // Subst = indole-3-acetate Donor (ID 34839): ?DGlcp(1-P-P-5)xXnucU Acceptor (ID 35064): Subst // Subst = indole-3-acetic acid Status: evidence in vitro
Confirmation methods: in vitro (purified protein) ID: 1299 | Organism (ID 12415): Arabidopsis thaliana Organ/tissue: leaf Full structure (ID 35065): | Song et al. 2005 DOI: 10.1007/BF03030584 Jin et al. 2013a DOI: 10.1371/journal.pone.0061705 Tanaka et al. 2014 DOI: 10.1093/pcp/pct173 | |
| Synthesized dimer: bDGlcp(1-12)Subst // Subst = naphthaleneacetate Donor (ID 34839): ?DGlcp(1-P-P-5)xXnucU Acceptor (ID 35066): Subst // Subst = naphthaleneacetic acid Status: evidence in vitro
Confirmation methods: in vitro (purified protein) ID: 1300 | Organism (ID 12415): Arabidopsis thaliana Organ/tissue: leaf Full structure (ID 35067): | Song et al. 2005 DOI: 10.1007/BF03030584 Jin et al. 2013a DOI: 10.1371/journal.pone.0061705 | |
| Synthesized dimer: bDGlcp(1-8)Subst // Subst = indole-3-carboxylic acid = SMILES O={8}C(O)C1=CNC2=CC=CC=C21 Donor (ID 34839): ?DGlcp(1-P-P-5)xXnucU Acceptor (ID 35068): Subst // Subst = indole-3-carboxylic acid = SMILES O={8}C(O)C1=CNC2=CC=CC=C21 Status: evidence in vitro
Confirmation methods: in vitro (purified protein) ID: 1301 | Organism (ID 12415): Arabidopsis thaliana Organ/tissue: leaf Full structure (ID 35069): | ||
| Synthesized dimer: bDGlcp(1-8)Subst // Subst = 2,4-dichlorophenoxyacetate Donor (ID 34839): ?DGlcp(1-P-P-5)xXnucU Acceptor (ID 35070): Subst // Subst = 2,4-dichlorophenoxyacetic acid Status: evidence in vitro
Confirmation methods: in vitro (purified protein) ID: 1302 | Organism (ID 12415): Arabidopsis thaliana Organ/tissue: leaf Full structure (ID 35071): | ||
| Synthesized dimer: bDGlcp(1-11)Subst // Subst = 2-oxindole-3-acetate Donor (ID 34839): ?DGlcp(1-P-P-5)xXnucU Acceptor (ID 35072): Subst // Subst = 2-oxindole-3-acetic acid Status: direct evidence in vivo
Confirmation methods: in vitro (purified protein), mutation ID: 1303 | Organism (ID 12415): Arabidopsis thaliana Organ/tissue: leaf Full structure (ID 35073): | Song et al. 2005 DOI: 10.1007/BF03030584 Tanaka et al. 2014 DOI: 10.1093/pcp/pct173 | |
| Synthesized dimer: DGlcp(1-7)Subst // Subst = jasmonate Donor (ID 34839): ?DGlcp(1-P-P-5)xXnucU Acceptor (ID 35074): Subst // Subst = jasmonic acid Status: evidence in vitro
Confirmation methods: in vitro (purified protein) ID: 1304 | Organism (ID 12415): Arabidopsis thaliana Organ/tissue: leaf Full structure (ID 35075): | Song et al. 2005 DOI: 10.1007/BF03030584 | |
| Synthesized dimer: DGlcp(1-7)Subst // Subst = dihydrojasmonate Donor (ID 34839): ?DGlcp(1-P-P-5)xXnucU Acceptor (ID 35076): Subst // Subst = dihydrojasmonic acid Status: evidence in vitro
Confirmation methods: in vitro (purified protein) ID: 1305 | Organism (ID 12415): Arabidopsis thaliana Organ/tissue: leaf Full structure (ID 35077): | ||
| Synthesized dimer: DGlcp(1-1)Subst // Subst = linolenate or linoleate Donor (ID 34839): ?DGlcp(1-P-P-5)xXnucU Acceptor (ID 35078): Subst // Subst = linolenic acid or linoleic acid Status: evidence in vitro
Confirmation methods: in vitro (purified protein) ID: 1306 Notes: In the paper, both linoleic and linolenic acids are mentioned, and it is impossible to distinguish between them. | Organism (ID 12415): Arabidopsis thaliana Organ/tissue: leaf Full structure (ID 35079): | ||
| Synthesized dimer: DGlcp(1-9)Cin Donor (ID 34839): ?DGlcp(1-P-P-5)xXnucU Acceptor (ID 35080): xXCin? Status: evidence in vitro
Confirmation methods: in vitro (purified protein) ID: 1307 | Organism (ID 12415): Arabidopsis thaliana Organ/tissue: leaf Full structure (ID 35081): | ||
| Synthesized dimer: DGlcp(1-9)pCoum Donor (ID 34839): ?DGlcp(1-P-P-5)xXnucU Acceptor (ID 35082): xXpCoum Status: evidence in vitro
Confirmation methods: in vitro (purified protein) ID: 1308 | Organism (ID 12415): Arabidopsis thaliana Organ/tissue: leaf Full structure (ID 35083): | ||
| Synthesized dimer: DGlcp(1-9)Caf Donor (ID 34839): ?DGlcp(1-P-P-5)xXnucU Acceptor (ID 34861): xXCaf? Status: evidence in vitro
Confirmation methods: in vitro (purified protein) ID: 1309 | Organism (ID 12415): Arabidopsis thaliana Organ/tissue: leaf Full structure (ID 35084): | ||
| Synthesized dimer: DGlcp(1-1)Subst // Subst = 2,4,5-trichlorophenol Donor (ID 34839): ?DGlcp(1-P-P-5)xXnucU Acceptor (ID 34851): Subst // Subst = 2,4,5-trichlorophenol Status: evidence in vitro
Confirmation methods: in vitro (crude extract) ID: 1310 | Organism (ID 12415): Arabidopsis thaliana Full structure (ID 34852): | Brazier-Hicks et al. 2007 DOI: 10.1073/pnas.0706421104 | |
| Synthesized dimer: DGlcp(1-1)Subst // Subst = 3,4-dichloroaniline Donor (ID 34839): ?DGlcp(1-P-P-5)xXnucU Acceptor (ID 34886): Subst // Subst = 3,4-dichloroaniline Status: evidence in vitro
Confirmation methods: in vitro (crude extract) ID: 1311 Notes: Low N-conjugating activity towards 3,4-dichloroaniline | Organism (ID 12415): Arabidopsis thaliana Full structure (ID 34887): | ||
| Synthesized dimer: DGlcp(1-1)Subst // Subst = 4-chlorothiophenol Donor (ID 34839): ?DGlcp(1-P-P-5)xXnucU Acceptor (ID 34855): Subst // Subst = 4-chlorothiophenol Status: evidence in vitro
Confirmation methods: in vitro (crude extract) ID: 1312 Notes: Low S-conjugating activity towards 4-chlorothiophenol | Organism (ID 12415): Arabidopsis thaliana Full structure (ID 34856): | ||
| Enzyme name: 74E2 UniProt ID: Q9SYK9.1 CAZy family: GT1 Gene name: UGT74E2 / AT1G05680 Gene GenBank ID: 837075 | Synthesized dimer: DGlcp(1-1')Subst // Subst = phenylacetothiohydroximate = SMILES {151}O/N=C({51}S)/CC1=CC=CC=C1 Donor (ID 34839): ?DGlcp(1-P-P-5)xXnucU Acceptor (ID 35035): Subst // Subst = phenylacetothiohydroximate = SMILES {151}O/N=C({51}S)/CC1=CC=CC=C1 Status: evidence in vitro
Confirmation methods: in vitro (purified protein) ID: 1313 Notes: Glc C1 is linked to S atom at -C(=NOH)S. | Organism (ID 12415): Arabidopsis thaliana Organ/tissue: leaf, root Full structure (ID 27572): CSDB ID(s): 60826 | Grubb et al. 2014 DOI: 10.1111/tpj.12541 Tognetti et al. 2010 DOI: 10.1105/tpc.109.071316 |
| Synthesized dimer: bDGlcp(1-13)Subst // Subst = hormodin = SMILES O={13}C(O)CCCC1=CNC2=C1C=CC=C2 Donor (ID 34839): ?DGlcp(1-P-P-5)xXnucU Acceptor (ID 35061): Subst // Subst = hormodin = SMILES O={13}C(O)CCCC1=CNC2=C1C=CC=C2 Status: direct evidence in vivo
Confirmation methods: in vitro (purified protein), overexpression ID: 1314 | Organism (ID 12415): Arabidopsis thaliana Organ/tissue: leaf, root Full structure (ID 27583): CSDB ID(s): 60839, 60841 | Tognetti et al. 2010 DOI: 10.1105/tpc.109.071316 | |
| Synthesized dimer: DGlcp(1-2)Subst // Subst = 2-hydroxylaminodinitrotoluene Donor (ID 34839): ?DGlcp(1-P-P-5)xXnucU Acceptor (ID 34985): Subst // Subst = 2-hydroxylaminodinitrotoluene Status: evidence in vitro
Confirmation methods: in vitro (purified protein) ID: 1315 Notes: Glc is linked via N-O bond. | Organism (ID 12415): Arabidopsis thaliana Organ/tissue: leaf, root Full structure (ID 34986): | Gandia-Herrero et al. 2008 DOI: 10.1111/j.1365-313X.2008.03653.x Tognetti et al. 2010 DOI: 10.1105/tpc.109.071316 | |
| Synthesized dimer: D1dGlcp(1C-3)Subst // Subst = 2-hydroxylaminodinitrotoluene Donor (ID 34839): ?DGlcp(1-P-P-5)xXnucU Acceptor (ID 34985): Subst // Subst = 2-hydroxylaminodinitrotoluene Status: evidence in vitro
Confirmation methods: in vitro (purified protein) ID: 1316 | Organism (ID 12415): Arabidopsis thaliana Organ/tissue: leaf, root Full structure (ID 35085): | ||
| Synthesized dimer: DGlcp(1-4)Subst // Subst = 4-hydroxylaminodinitrotoluene Donor (ID 34839): ?DGlcp(1-P-P-5)xXnucU Acceptor (ID 34962): Subst // Subst = 4-hydroxylaminodinitrotoluene Status: evidence in vitro
Confirmation methods: in vitro (purified protein) ID: 1317 Notes: Glc is linked via N-O bond. | Organism (ID 12415): Arabidopsis thaliana Organ/tissue: leaf, root Full structure (ID 34963): | ||
| Synthesized dimer: D1dGlcp(1C-3)Subst // Subst = 4-hydroxylaminodinitrotoluene Donor (ID 34839): ?DGlcp(1-P-P-5)xXnucU Acceptor (ID 34962): Subst // Subst = 4-hydroxylaminodinitrotoluene Status: evidence in vitro
Confirmation methods: in vitro (purified protein) ID: 1318 | Organism (ID 12415): Arabidopsis thaliana Organ/tissue: leaf, root Full structure (ID 34964): | ||
| Enzyme name: 74F1 UniProt ID: O22820.1 CAZy family: GT1 Gene name: UGT74F1 / AT2G43840 Gene GenBank ID: 818988 | Synthesized dimer: bDGlcp(1-2)Sal Donor (ID 34839): ?DGlcp(1-P-P-5)xXnucU Acceptor (ID 35086): xXSal // Sal = 2-hydroxybenzoic (salicylic) acid Status: direct evidence in vivo
Confirmation methods: in vitro (purified protein), mutation ID: 1319 | Organism (ID 12415): Arabidopsis thaliana Organ/tissue: leaf Full structure (ID 27584): CSDB ID(s): 60842, 60845, 60849 | Lim et al. 2002 DOI: 10.1074/jbc.M109287200 Dean et al. 2008 DOI: 10.1111/j.1399-3054.2007.01041.x Boachon et al. 2014 DOI: 10.1007/s10658-014-0424-7 Li et al. 2015 DOI: 10.1105/tpc.15.00223 Haroth et al. 2019 DOI: 10.1074/jbc.RA119.007600 |
| Synthesized dimer: DGlcp(1-7)Bz Donor (ID 34839): ?DGlcp(1-P-P-5)xXnucU Acceptor (ID 35087): Bz Status: evidence in vitro
Confirmation methods: in vitro (purified protein) ID: 1320 | Organism (ID 12415): Arabidopsis thaliana Full structure (ID 35088): | Lim et al. 2002 DOI: 10.1074/jbc.M109287200 Li et al. 2015 DOI: 10.1105/tpc.15.00223 | |
| Synthesized dimer: DGlcp(1-7)3HOBz Donor (ID 34839): ?DGlcp(1-P-P-5)xXnucU Acceptor (ID 34892): xX3HOBz // 3HOBz = 3-hydroxybenzoic (m-hydroxybenzoic) acid Status: evidence in vitro
Confirmation methods: in vitro (purified protein) ID: 1321 | Organism (ID 12415): Arabidopsis thaliana Full structure (ID 35089): | Lim et al. 2002 DOI: 10.1074/jbc.M109287200 | |
| Synthesized dimer: DGlcp(1-7)Quercetin Donor (ID 34839): ?DGlcp(1-P-P-5)xXnucU Acceptor (ID 34846): xXQuercetin Status: evidence in vitro
Confirmation methods: in vitro (purified protein), expression in E.coli (as whole-cell biocatalyst) ID: 1322 | Organism (ID 12415): Arabidopsis thaliana Expressed in: E. coli Full structure (ID 34984): | Lim et al. 2004 DOI: 10.1002/bit.20154 | |
| Synthesized dimer: DGlcp(1-4')Quercetin Donor (ID 34839): ?DGlcp(1-P-P-5)xXnucU Acceptor (ID 34846): xXQuercetin Status: evidence in vitro
Confirmation methods: in vitro (purified protein), expression in E.coli (as whole-cell biocatalyst) ID: 1323 | Organism (ID 12415): Arabidopsis thaliana Expressed in: E. coli Full structure (ID 34996): | ||
| Synthesized dimer: DGlcp(1-1')Subst // Subst = phenylacetothiohydroximate = SMILES {151}O/N=C({51}S)/CC1=CC=CC=C1 Donor (ID 34839): ?DGlcp(1-P-P-5)xXnucU Acceptor (ID 35035): Subst // Subst = phenylacetothiohydroximate = SMILES {151}O/N=C({51}S)/CC1=CC=CC=C1 Status: evidence in vitro
Confirmation methods: in vitro (purified protein) ID: 1324 Notes: Glc C1 is linked to S atom at -C(=NOH)S. | Organism (ID 12415): Arabidopsis thaliana Full structure (ID 27572): CSDB ID(s): 60826 | Grubb et al. 2014 DOI: 10.1111/tpj.12541 | |
| Synthesized dimer: DGlcp(1-7)4NBz Donor (ID 34839): ?DGlcp(1-P-P-5)xXnucU Acceptor (ID 35090): xX4NBz // 4NBz = 4-aminobenzoic acid Status: evidence in vitro
Confirmation methods: in vitro (purified protein) ID: 1325 | Organism (ID 12415): Arabidopsis thaliana Full structure (ID 35091): | Eudes et al. 2008 DOI: 10.1074/jbc.M709591200 | |
| Synthesized dimer: bDGlcp(1-7)2NBz Donor (ID 34839): ?DGlcp(1-P-P-5)xXnucU Acceptor (ID 35092): xX2NBz // 2NBz = 2-aminobenzoic (anthranilic) acid Status: evidence in vitro
Confirmation methods: in vitro (purified protein) ID: 1326 | Organism (ID 12415): Arabidopsis thaliana Full structure (ID 35093): | Li et al. 2015 DOI: 10.1105/tpc.15.00223 Quiel et al. 2003 DOI: 10.1074/jbc.M211822200 | |
| Synthesized dimer: DGlcp(1-7)Subst // Subst = esculetin Donor (ID 34839): ?DGlcp(1-P-P-5)xXnucU Acceptor (ID 34847): Subst // Subst = esculetin Status: evidence in vitro
Confirmation methods: in vitro (purified protein) ID: 1327 Notes: NC: cichoriin | Organism (ID 12415): Arabidopsis thaliana Full structure (ID 34848): | Lim et al. 2003a DOI: 10.1093/glycob/cwg017 | |
| Synthesized dimer: DGlcp(1-7)Subst // Subst = scopoletin Donor (ID 34839): ?DGlcp(1-P-P-5)xXnucU Acceptor (ID 34849): Subst // Subst = scopoletin Status: evidence in vitro
Confirmation methods: in vitro (purified protein) ID: 1328 Notes: NC: scopolin | Organism (ID 12415): Arabidopsis thaliana Full structure (ID 34850): | ||
| Synthesized dimer: DGlcp(1-1)Subst // Subst = 2,4,5-trichlorophenol Donor (ID 34839): ?DGlcp(1-P-P-5)xXnucU Acceptor (ID 34851): Subst // Subst = 2,4,5-trichlorophenol Status: evidence in vitro
Confirmation methods: in vitro (crude extract) ID: 1329 | Organism (ID 12415): Arabidopsis thaliana Full structure (ID 34852): | Brazier-Hicks et al. 2007 DOI: 10.1073/pnas.0706421104 | |
| Synthesized dimer: DGlcp(1-1)Subst // Subst = 4-chlorothiophenol Donor (ID 34839): ?DGlcp(1-P-P-5)xXnucU Acceptor (ID 34855): Subst // Subst = 4-chlorothiophenol Status: evidence in vitro
Confirmation methods: in vitro (crude extract) ID: 1330 Notes: S-conjugating activity towards 4-chlorothiophenol | Organism (ID 12415): Arabidopsis thaliana Full structure (ID 34856): | ||
| Enzyme name: 74F2 UniProt ID: O22822.1 CAZy family: GT1 Gene name: UGT74F2 / AtSAGT1 / AT2G43820 Gene GenBank ID: 818986 | Synthesized dimer: bDGlcp(1-2)Sal Donor (ID 34839): ?DGlcp(1-P-P-5)xXnucU Acceptor (ID 35086): xXSal // Sal = 2-hydroxybenzoic (salicylic) acid Status: direct evidence in vivo
Confirmation methods: in vitro (purified protein), mutation ID: 1331 | Organism (ID 12415): Arabidopsis thaliana Organ/tissue: leaf, seed, seedling, stem, silique Full structure (ID 27584): CSDB ID(s): 60842, 60845, 60849 | Lim et al. 2002 DOI: 10.1074/jbc.M109287200 Dean et al. 2008 DOI: 10.1111/j.1399-3054.2007.01041.x Boachon et al. 2014 DOI: 10.1007/s10658-014-0424-7 Li et al. 2015 DOI: 10.1105/tpc.15.00223 Song 2006 PMID: 17085977 Song et al. 2008 DOI: 10.1016/j.phytochem.2007.12.010 Song et al. 2009 DOI: 10.1007/s10059-009-0108-x |
| Synthesized dimer: bDGlcp(1-7)Sal Donor (ID 34839): ?DGlcp(1-P-P-5)xXnucU Acceptor (ID 35086): xXSal // Sal = 2-hydroxybenzoic (salicylic) acid Status: direct evidence in vivo
Confirmation methods: in vitro (purified protein), mutation ID: 1332 | Organism (ID 12415): Arabidopsis thaliana Organ/tissue: leaf, seed, seedling, stem, silique Full structure (ID 27587): CSDB ID(s): 60846, 60851 | ||
| Synthesized dimer: bDGlcp(1-2)Sal Donor (ID 34839): ?DGlcp(1-P-P-5)xXnucU Acceptor (ID 35096): Me(1-7)xXSal // Sal = 2-hydroxybenzoic (salicylic) acid Status: indirect evidence in vivo
Confirmation methods: overexpression ID: 1333 | Organism (ID 12415): Arabidopsis thaliana Organ/tissue: leaf, seed, seedling, stem, silique Full structure (ID 27590): CSDB ID(s): 60850 | Li et al. 2015 DOI: 10.1105/tpc.15.00223 Song 2006 PMID: 17085977 Song et al. 2008 DOI: 10.1016/j.phytochem.2007.12.010 Song et al. 2009 DOI: 10.1007/s10059-009-0108-x | |
| Synthesized dimer: DGlcp(1-7)Bz Donor (ID 34839): ?DGlcp(1-P-P-5)xXnucU Acceptor (ID 35087): Bz Status: evidence in vitro
Confirmation methods: in vitro (purified protein) ID: 1334 | Organism (ID 12415): Arabidopsis thaliana Organ/tissue: leaf, seed, seedling, stem, silique Full structure (ID 35088): | Lim et al. 2002 DOI: 10.1074/jbc.M109287200 Li et al. 2015 DOI: 10.1105/tpc.15.00223 Song 2006 PMID: 17085977 | |
| Synthesized dimer: DGlcp(1-7)3HOBz Donor (ID 34839): ?DGlcp(1-P-P-5)xXnucU Acceptor (ID 34892): xX3HOBz // 3HOBz = 3-hydroxybenzoic (m-hydroxybenzoic) acid Status: evidence in vitro
Confirmation methods: in vitro (purified protein) ID: 1335 | Organism (ID 12415): Arabidopsis thaliana Organ/tissue: leaf, seed, seedling, stem, silique Full structure (ID 35089): | ||
| Synthesized dimer: DGlcp(1-1)Subst // Subst = nicotinic acid = SMILES O={1}C(O)C1=CN=CC=C1 Donor (ID 34839): ?DGlcp(1-P-P-5)xXnucU Acceptor (ID 35097): Subst // Subst = nicotinic acid = SMILES O={1}C(O)C1=CN=CC=C1 Status: direct evidence in vivo
Confirmation methods: in vitro (purified protein), mutation ID: 1336 | Organism (ID 12415): Arabidopsis thaliana Organ/tissue: leaf, seed, seedling, stem, silique Full structure (ID 27589): CSDB ID(s): 60848 | Li et al. 2015 DOI: 10.1105/tpc.15.00223 | |
| Synthesized dimer: bDGlcp(1-7)2NBz Donor (ID 34839): ?DGlcp(1-P-P-5)xXnucU Acceptor (ID 35092): xX2NBz // 2NBz = 2-aminobenzoic (anthranilic) acid Status: evidence in vitro
Confirmation methods: in vitro (purified protein) ID: 1337 | Organism (ID 12415): Arabidopsis thaliana Organ/tissue: leaf, seed, seedling, stem, silique Full structure (ID 35093): | Li et al. 2015 DOI: 10.1105/tpc.15.00223 Quiel et al. 2003 DOI: 10.1074/jbc.M211822200 | |
| Synthesized dimer: DGlcp(1-7)4NBz Donor (ID 34839): ?DGlcp(1-P-P-5)xXnucU Acceptor (ID 35090): xX4NBz // 4NBz = 4-aminobenzoic acid Status: evidence in vitro
Confirmation methods: in vitro (purified protein) ID: 1338 | Organism (ID 12415): Arabidopsis thaliana Organ/tissue: leaf, seed, seedling, stem, silique Full structure (ID 35091): | Li et al. 2015 DOI: 10.1105/tpc.15.00223 Eudes et al. 2008 DOI: 10.1074/jbc.M709591200 | |
| Synthesized dimer: DGlcp(1-7)Subst // Subst = esculetin Donor (ID 34839): ?DGlcp(1-P-P-5)xXnucU Acceptor (ID 34847): Subst // Subst = esculetin Status: evidence in vitro
Confirmation methods: in vitro (purified protein) ID: 1339 Notes: NC: cichoriin | Organism (ID 12415): Arabidopsis thaliana Organ/tissue: leaf, seed, seedling, stem, silique Full structure (ID 34848): | Lim et al. 2003a DOI: 10.1093/glycob/cwg017 Li et al. 2015 DOI: 10.1105/tpc.15.00223 | |
| Synthesized dimer: DGlcp(1-7)Subst // Subst = scopoletin Donor (ID 34839): ?DGlcp(1-P-P-5)xXnucU Acceptor (ID 34849): Subst // Subst = scopoletin Status: evidence in vitro
Confirmation methods: in vitro (purified protein) ID: 1340 Notes: NC: scopolin | Organism (ID 12415): Arabidopsis thaliana Organ/tissue: leaf, seed, seedling, stem, silique Full structure (ID 34850): | ||
| Synthesized dimer: DGlcp(1-1)Subst // Subst = 2,4,5-trichlorophenol Donor (ID 34839): ?DGlcp(1-P-P-5)xXnucU Acceptor (ID 34851): Subst // Subst = 2,4,5-trichlorophenol Status: evidence in vitro
Confirmation methods: in vitro (crude extract) ID: 1341 | Organism (ID 12415): Arabidopsis thaliana Full structure (ID 34852): | Brazier-Hicks et al. 2007 DOI: 10.1073/pnas.0706421104 | |
| Synthesized dimer: DGlcp(1-1)Subst // Subst = 4-chlorothiophenol Donor (ID 34839): ?DGlcp(1-P-P-5)xXnucU Acceptor (ID 34855): Subst // Subst = 4-chlorothiophenol Status: evidence in vitro
Confirmation methods: in vitro (crude extract) ID: 1342 Notes: S-conjugating activity towards 4-chlorothiophenol | Organism (ID 12415): Arabidopsis thaliana Full structure (ID 34856): | ||
| Enzyme name: 75B1 UniProt ID: Q9LR44.1 CAZy family: GT1 Gene name: UGT75B1 / At1g05560 Gene GenBank ID: 837058 | Synthesized dimer: DGlcp(1-7)Prcat Donor (ID 34839): ?DGlcp(1-P-P-5)xXnucU Acceptor (ID 34840): xXPrcat // Prcat = 3,4-dihydroxybenzoic (protocatechuic) acid Status: evidence in vitro
Confirmation methods: in vitro (purified protein) ID: 1343 | Organism (ID 12415): Arabidopsis thaliana Organ/tissue: leaf, stem, flower, silique Full structure (ID 35098): | Lim et al. 2002 DOI: 10.1074/jbc.M109287200 Messner et al. 2003 DOI: 10.1007/s00425-002-0969-0 |
| Synthesized dimer: DGlcp(1-7)4HOBz Donor (ID 34839): ?DGlcp(1-P-P-5)xXnucU Acceptor (ID 34982): xX4HOBz // 4HOBz = 4-hydroxybenzoic (p-hydroxybenzoic) acidz Status: evidence in vitro
Confirmation methods: in vitro (purified protein) ID: 1344 | Organism (ID 12415): Arabidopsis thaliana Organ/tissue: leaf, stem, flower, silique Full structure (ID 35099): | ||
| Synthesized dimer: DGlcp(1-7)Sal Donor (ID 34839): ?DGlcp(1-P-P-5)xXnucU Acceptor (ID 35086): xXSal // Sal = 2-hydroxybenzoic (salicylic) acid Status: evidence in vitro
Confirmation methods: in vitro (purified protein) ID: 1345 | Organism (ID 12415): Arabidopsis thaliana Organ/tissue: leaf, stem, flower, silique Full structure (ID 27585): CSDB ID(s): 60843 | ||
| Synthesized dimer: DGlcp(1-7)Bz Donor (ID 34839): ?DGlcp(1-P-P-5)xXnucU Acceptor (ID 35087): Bz Status: evidence in vitro
Confirmation methods: in vitro (purified protein) ID: 1346 | Organism (ID 12415): Arabidopsis thaliana Organ/tissue: leaf, stem, flower, silique Full structure (ID 35088): | ||
| Synthesized dimer: DGlcp(1-7)3HOBz Donor (ID 34839): ?DGlcp(1-P-P-5)xXnucU Acceptor (ID 34892): xX3HOBz // 3HOBz = 3-hydroxybenzoic (m-hydroxybenzoic) acid Status: evidence in vitro
Confirmation methods: in vitro (purified protein) ID: 1347 | Organism (ID 12415): Arabidopsis thaliana Organ/tissue: leaf, stem, flower, silique Full structure (ID 35089): | ||
| Synthesized dimer: bDGlcp(1-11)Subst // Subst = indole-3-acetate Donor (ID 34839): ?DGlcp(1-P-P-5)xXnucU Acceptor (ID 35064): Subst // Subst = indole-3-acetic acid Status: evidence in vitro
Confirmation methods: in vitro (purified protein) ID: 1348 Notes: Low activity | Organism (ID 12415): Arabidopsis thaliana Organ/tissue: leaf, stem, flower, silique Full structure (ID 35065): | Messner et al. 2003 DOI: 10.1007/s00425-002-0969-0 Jackson et al. 2001 DOI: 10.1074/jbc.M006185200 | |
| Synthesized dimer: bDGlcp(1-12)Subst // Subst = indole-3-propionate Donor (ID 34839): ?DGlcp(1-P-P-5)xXnucU Acceptor (ID 35062): Subst // Subst = indole-3-propionic acid Status: evidence in vitro
Confirmation methods: in vitro (purified protein) ID: 1349 | Organism (ID 12415): Arabidopsis thaliana Organ/tissue: leaf, stem, flower, silique Full structure (ID 35063): | ||
| Synthesized dimer: bDGlcp(1-13)Subst // Subst = hormodin = SMILES O={13}C(O)CCCC1=CNC2=C1C=CC=C2 Donor (ID 34839): ?DGlcp(1-P-P-5)xXnucU Acceptor (ID 35061): Subst // Subst = hormodin = SMILES O={13}C(O)CCCC1=CNC2=C1C=CC=C2 Status: evidence in vitro
Confirmation methods: in vitro (purified protein) ID: 1350 | Organism (ID 12415): Arabidopsis thaliana Organ/tissue: leaf, stem, flower, silique Full structure (ID 27583): CSDB ID(s): 60839, 60841 | ||
| Synthesized dimer: bDGlcp(1-11)Subst // Subst = 5-hydroxy-indole-3-acetate Donor (ID 34839): ?DGlcp(1-P-P-5)xXnucU Acceptor (ID 35100): Subst // Subst = 5-hydroxy-indole-3-acetic acid Status: evidence in vitro
Confirmation methods: in vitro (purified protein) ID: 1351 Notes: Low activity | Organism (ID 12415): Arabidopsis thaliana Organ/tissue: leaf, stem, flower, silique Full structure (ID 35101): | ||
| Synthesized dimer: bDGlcp(1-9)Cin Donor (ID 34839): ?DGlcp(1-P-P-5)xXnucU Acceptor (ID 35080): xXCin? Status: evidence in vitro
Confirmation methods: in vitro (purified protein) ID: 1352 | Organism (ID 12415): Arabidopsis thaliana Organ/tissue: leaf, stem, flower, silique Full structure (ID 30700): CSDB ID(s): 64951, 66356 | ||
| Synthesized dimer: bDGlcp(1-12)Subst // Subst = naphthaleneacetate Donor (ID 34839): ?DGlcp(1-P-P-5)xXnucU Acceptor (ID 35066): Subst // Subst = naphthaleneacetic acid Status: evidence in vitro
Confirmation methods: in vitro (purified protein) ID: 1353 Notes: Low activity | Organism (ID 12415): Arabidopsis thaliana Organ/tissue: leaf, stem, flower, silique Full structure (ID 35067): | ||
| Synthesized dimer: DGlcp(1-7)4NBz Donor (ID 34839): ?DGlcp(1-P-P-5)xXnucU Acceptor (ID 35090): xX4NBz // 4NBz = 4-aminobenzoic acid Status: evidence in vitro
Confirmation methods: in vitro (purified protein) ID: 1354 | Organism (ID 12415): Arabidopsis thaliana Organ/tissue: leaf, stem, flower, silique Full structure (ID 35091): | Messner et al. 2003 DOI: 10.1007/s00425-002-0969-0 Eudes et al. 2008 DOI: 10.1074/jbc.M709591200 | |
| Synthesized dimer: DGlcp(1-7)Subst // Subst = esculetin Donor (ID 34839): ?DGlcp(1-P-P-5)xXnucU Acceptor (ID 34847): Subst // Subst = esculetin Status: evidence in vitro
Confirmation methods: in vitro (purified protein) ID: 1355 Notes: NC: cichoriin | Organism (ID 12415): Arabidopsis thaliana Organ/tissue: leaf, stem, flower, silique Full structure (ID 34848): | Lim et al. 2003a DOI: 10.1093/glycob/cwg017 Messner et al. 2003 DOI: 10.1007/s00425-002-0969-0 | |
| Synthesized dimer: DGlcp(1-1)Subst // Subst = 2,4,5-trichlorophenol Donor (ID 34839): ?DGlcp(1-P-P-5)xXnucU Acceptor (ID 34851): Subst // Subst = 2,4,5-trichlorophenol Status: evidence in vitro
Confirmation methods: in vitro (purified protein), in vitro (crude extract) ID: 1356 | Organism (ID 12415): Arabidopsis thaliana Organ/tissue: leaf, stem, flower, silique Full structure (ID 34852): | Brazier-Hicks et al. 2007 DOI: 10.1073/pnas.0706421104 Messner et al. 2003 DOI: 10.1007/s00425-002-0969-0 | |
| Synthesized dimer: DGlcp(1-1)Subst // Subst = 3,4-dichloroaniline Donor (ID 34839): ?DGlcp(1-P-P-5)xXnucU Acceptor (ID 34886): Subst // Subst = 3,4-dichloroaniline Status: evidence in vitro
Confirmation methods: in vitro (crude extract) ID: 1357 Notes: Low N-conjugating activity towards 3,4-dichloroaniline | Organism (ID 12415): Arabidopsis thaliana Full structure (ID 34887): | Brazier-Hicks et al. 2007 DOI: 10.1073/pnas.0706421104 | |
| Synthesized dimer: DGlcp(1-1)Subst // Subst = 4-chlorothiophenol Donor (ID 34839): ?DGlcp(1-P-P-5)xXnucU Acceptor (ID 34855): Subst // Subst = 4-chlorothiophenol Status: evidence in vitro
Confirmation methods: in vitro (crude extract) ID: 1358 Notes: S-conjugating activity towards 4-chlorothiophenol | Organism (ID 12415): Arabidopsis thaliana Full structure (ID 34856): | ||
| Synthesized dimer: DGlcp(1-1)Subst // Subst = (+)-abscisic acid = SMILES CC1=CC(=O)CC({51}[C@]1(/C=C/C(=C\{1}C(=O)O)/C)O)(C)C Donor (ID 34839): ?DGlcp(1-P-P-5)xXnucU Acceptor (ID 34853): Subst // Subst = (+)-abscisic acid = SMILES CC1=CC(=O)CC({51}[C@]1(/C=C/C(=C\{1}C(=O)O)/C)O)(C)C Status: direct evidence in vivo
Confirmation methods: in vitro (purified protein), overexpression ID: 1359 Notes: UGT75B1 is significantly upregulated by adverse conditions, such as osmotic stress, salinity and abscisic acid. UGT75B1 enantioselectively glucosylates (+)-abscisic acid, but not (-)-abscisic acid | Organism (ID 12415): Arabidopsis thaliana Organ/tissue: leaf, stem, flower, silique Full structure (ID 34854): | Lim et al. 2005a DOI: 10.1016/j.tetasy.2004.11.062 Messner et al. 2003 DOI: 10.1007/s00425-002-0969-0 Chen et al. 2020b DOI: 10.1007/s11103-019-00953-4 | |
| Enzyme name: 75B2 UniProt ID: Q9ZVY5.1 CAZy family: GT1 Gene name: UGT75B2 / AT1G05530 Gene GenBank ID: 837055 | Synthesized dimer: DGlcp(1-7)Prcat Donor (ID 34839): ?DGlcp(1-P-P-5)xXnucU Acceptor (ID 34840): xXPrcat // Prcat = 3,4-dihydroxybenzoic (protocatechuic) acid Status: evidence in vitro
Confirmation methods: in vitro (purified protein) ID: 1360 | Organism (ID 12415): Arabidopsis thaliana Full structure (ID 35098): | Lim et al. 2002 DOI: 10.1074/jbc.M109287200 |
| Synthesized dimer: DGlcp(1-7)4HOBz Donor (ID 34839): ?DGlcp(1-P-P-5)xXnucU Acceptor (ID 34982): xX4HOBz // 4HOBz = 4-hydroxybenzoic (p-hydroxybenzoic) acidz Status: evidence in vitro
Confirmation methods: in vitro (purified protein) ID: 1361 | Organism (ID 12415): Arabidopsis thaliana Full structure (ID 35099): | ||
| Synthesized dimer: bDGlcp(1-11)Subst // Subst = indole-3-acetate Donor (ID 34839): ?DGlcp(1-P-P-5)xXnucU Acceptor (ID 35064): Subst // Subst = indole-3-acetic acid Status: evidence in vitro
Confirmation methods: in vitro (purified protein) ID: 1362 | Organism (ID 12415): Arabidopsis thaliana Full structure (ID 35065): | Jackson et al. 2001 DOI: 10.1074/jbc.M006185200 | |
| Synthesized dimer: bDGlcp(1-12)Subst // Subst = indole-3-propionate Donor (ID 34839): ?DGlcp(1-P-P-5)xXnucU Acceptor (ID 35062): Subst // Subst = indole-3-propionic acid Status: evidence in vitro
Confirmation methods: in vitro (purified protein) ID: 1363 | Organism (ID 12415): Arabidopsis thaliana Full structure (ID 35063): | ||
| Synthesized dimer: bDGlcp(1-13)Subst // Subst = hormodin = SMILES O={13}C(O)CCCC1=CNC2=C1C=CC=C2 Donor (ID 34839): ?DGlcp(1-P-P-5)xXnucU Acceptor (ID 35061): Subst // Subst = hormodin = SMILES O={13}C(O)CCCC1=CNC2=C1C=CC=C2 Status: evidence in vitro
Confirmation methods: in vitro (purified protein) ID: 1364 | Organism (ID 12415): Arabidopsis thaliana Full structure (ID 27583): CSDB ID(s): 60839, 60841 | ||
| Synthesized dimer: bDGlcp(1-11)Subst // Subst = 5-hydroxy-indole-3-acetate Donor (ID 34839): ?DGlcp(1-P-P-5)xXnucU Acceptor (ID 35100): Subst // Subst = 5-hydroxy-indole-3-acetic acid Status: evidence in vitro
Confirmation methods: in vitro (purified protein) ID: 1365 | Organism (ID 12415): Arabidopsis thaliana Full structure (ID 35101): | ||
| Synthesized dimer: bDGlcp(1-9)Cin Donor (ID 34839): ?DGlcp(1-P-P-5)xXnucU Acceptor (ID 35080): xXCin? Status: evidence in vitro
Confirmation methods: in vitro (purified protein) ID: 1366 | Organism (ID 12415): Arabidopsis thaliana Full structure (ID 30700): CSDB ID(s): 64951, 66356 | ||
| Synthesized dimer: bDGlcp(1-12)Subst // Subst = naphthaleneacetate Donor (ID 34839): ?DGlcp(1-P-P-5)xXnucU Acceptor (ID 35066): Subst // Subst = naphthaleneacetic acid Status: evidence in vitro
Confirmation methods: in vitro (purified protein) ID: 1367 | Organism (ID 12415): Arabidopsis thaliana Full structure (ID 35067): | ||
| Synthesized dimer: DGlcp(1-7)Subst // Subst = esculetin Donor (ID 34839): ?DGlcp(1-P-P-5)xXnucU Acceptor (ID 34847): Subst // Subst = esculetin Status: evidence in vitro
Confirmation methods: in vitro (purified protein) ID: 1368 Notes: NC: cichoriin | Organism (ID 12415): Arabidopsis thaliana Full structure (ID 34848): | Lim et al. 2003a DOI: 10.1093/glycob/cwg017 | |
| Synthesized dimer: DGlcp(1-1)Subst // Subst = (+)-abscisic acid = SMILES CC1=CC(=O)CC({51}[C@]1(/C=C/C(=C\{1}C(=O)O)/C)O)(C)C Donor (ID 34839): ?DGlcp(1-P-P-5)xXnucU Acceptor (ID 34853): Subst // Subst = (+)-abscisic acid = SMILES CC1=CC(=O)CC({51}[C@]1(/C=C/C(=C\{1}C(=O)O)/C)O)(C)C Status: evidence in vitro
Confirmation methods: in vitro (purified protein) ID: 1369 | Organism (ID 12415): Arabidopsis thaliana Full structure (ID 34854): | Lim et al. 2005a DOI: 10.1016/j.tetasy.2004.11.062 | |
| Enzyme name: 75C1 UniProt ID: Q0WW21.2 CAZy family: GT1 Gene name: At4g14090 Gene GenBank ID: 827046 | Synthesized dimer: bDGlcp(1-5)Cyanidin Donor (ID 34839): ?DGlcp(1-P-P-5)xXnucU Acceptor (ID 35102): bDXylp(1-2)[xXpCoum(9-6)]bDGlcp(1-3)xXCyanidin Status: indirect evidence in vivo
Confirmation methods: mutation ID: 1370 Notes: NC: A3. 75C1 is required for synthesis of bDXylp(1-2)bDGlcp(1-3)[bDGlcp(1-5)]xXCyanidin (A1), xXSin?(9-2)bDXylp(1-2)bDGlcp(1-3)[bDGlcp(1-5)]xXCyanidin (A4), bDXylp(1-2)[xXpCoum(9-6)]bDGlcp(1-3)[xXMal(1-6)bDGlcp(1-5)]xXCyanidin (A5), xXSin?(9-2)bDXylp(1-2)[xXpCoum(9-6)]bDGlcp(1-3)[bDGlcp(1-5)]xXCyanidin (A7), bDXylp(1-2)[bDGlcp(1-4)xXpCoum(9-6)]bDGlcp(1-3)[xXMal(1-6)bDGlcp(1-5)]xXCyanidin (A8) and xXSin?(9-2)bDXylp(1-2)[bDGlcp(1-4)xXpCoum(9-6)]bDGlcp(1-3)[xXMal(1-6)bDGlcp(1-5)]xXCyanidin (A11) in planta. | Organism (ID 12415): Arabidopsis thaliana Organ/tissue: leaf Full structure (ID 27597): CSDB ID(s): 60859, 60868, 60923, 61094 | Miyahara et al. 2013 DOI: 10.1016/j.jplph.2012.12.001 Tohge et al. 2005 DOI: 10.1111/j.1365-313X.2005.02371.x |
| Enzyme name: 75D1 UniProt ID: O23406.2 CAZy family: GT1 Gene name: AT4G15550 / IAGLU Gene GenBank ID: 827229 | Synthesized dimer: DGlcp(1-7)Subst // Subst = scopoletin Donor (ID 34839): ?DGlcp(1-P-P-5)xXnucU Acceptor (ID 34849): Subst // Subst = scopoletin Status: evidence in vitro
Confirmation methods: in vitro (purified protein) ID: 1371 Notes: NC: scopolin | Organism (ID 12415): Arabidopsis thaliana Organ/tissue: root, leaf, stem, flower, silique Full structure (ID 34850): | Lim et al. 2003a DOI: 10.1093/glycob/cwg017 Messner et al. 2003 DOI: 10.1007/s00425-002-0969-0 |
| Synthesized dimer: DGlcp(1-1)Subst // Subst = 2,4,5-trichlorophenol Donor (ID 34839): ?DGlcp(1-P-P-5)xXnucU Acceptor (ID 34851): Subst // Subst = 2,4,5-trichlorophenol Status: evidence in vitro
Confirmation methods: in vitro (purified protein), in vitro (crude extract) ID: 1372 | Organism (ID 12415): Arabidopsis thaliana Organ/tissue: root, leaf, stem, flower, silique Full structure (ID 34852): | Brazier-Hicks et al. 2007 DOI: 10.1073/pnas.0706421104 Messner et al. 2003 DOI: 10.1007/s00425-002-0969-0 | |
| Synthesized dimer: DGlcp(1-1)Subst // Subst = 3,4-dichloroaniline Donor (ID 34839): ?DGlcp(1-P-P-5)xXnucU Acceptor (ID 34886): Subst // Subst = 3,4-dichloroaniline Status: evidence in vitro
Confirmation methods: in vitro (crude extract) ID: 1373 Notes: Low N-conjugating activity towards 3,4-dichloroaniline | Organism (ID 12415): Arabidopsis thaliana Full structure (ID 34887): | Brazier-Hicks et al. 2007 DOI: 10.1073/pnas.0706421104 | |
| Synthesized dimer: DGlcp(1-1)Subst // Subst = 4-chlorothiophenol Donor (ID 34839): ?DGlcp(1-P-P-5)xXnucU Acceptor (ID 34855): Subst // Subst = 4-chlorothiophenol Status: evidence in vitro
Confirmation methods: in vitro (crude extract) ID: 1374 Notes: S-conjugating activity towards 4-chlorothiophenol | Organism (ID 12415): Arabidopsis thaliana Full structure (ID 34856): | Brazier-Hicks et al. 2007 DOI: 10.1073/pnas.0706421104 Brazier-Hicks et al. 2005 DOI: 10.1111/j.1365-313X.2005.02398.x | |
| Synthesized dimer: DGlcp(1-?)Kaempferol Donor (ID 34839): ?DGlcp(1-P-P-5)xXnucU Acceptor (ID 34951): xXKaempferol Status: evidence in vitro
Confirmation methods: in vitro (purified protein) ID: 1375 | Organism (ID 12415): Arabidopsis thaliana Organ/tissue: root, leaf, stem, flower, silique Full structure (ID 35013): | Messner et al. 2003 DOI: 10.1007/s00425-002-0969-0 | |
| Synthesized dimer: DGlcp(1-13)Subst // Subst = hormodin = SMILES O={13}C(O)CCCC1=CNC2=C1C=CC=C2 Donor (ID 34839): ?DGlcp(1-P-P-5)xXnucU Acceptor (ID 35061): Subst // Subst = hormodin = SMILES O={13}C(O)CCCC1=CNC2=C1C=CC=C2 Status: evidence in vitro
Confirmation methods: in vitro (purified protein) ID: 1376 | Organism (ID 12415): Arabidopsis thaliana Organ/tissue: root, leaf, stem, flower, silique Full structure (ID 35103): | Messner et al. 2003 DOI: 10.1007/s00425-002-0969-0 Zhang et al. 2016 DOI: 10.1007/s11103-015-0395-x | |
| Synthesized dimer: DGlcp(1-11)Subst // Subst = indole-3-acetate Donor (ID 34839): ?DGlcp(1-P-P-5)xXnucU Acceptor (ID 35064): Subst // Subst = indole-3-acetic acid Status: evidence in vitro
Confirmation methods: in vitro (purified protein) ID: 1377 | Organism (ID 12415): Arabidopsis thaliana Organ/tissue: root, leaf, stem, flower, silique Full structure (ID 35104): | ||
| Synthesized dimer: DGlcp(1-12)Subst // Subst = indole-3-propionate Donor (ID 34839): ?DGlcp(1-P-P-5)xXnucU Acceptor (ID 35062): Subst // Subst = indole-3-propionic acid Status: evidence in vitro
Confirmation methods: in vitro (purified protein) ID: 1378 | Organism (ID 12415): Arabidopsis thaliana Organ/tissue: root, leaf, stem, flower, silique Full structure (ID 35105): | ||
| Synthesized dimer: DGlcp(1-12)Subst // Subst = naphthaleneacetate Donor (ID 34839): ?DGlcp(1-P-P-5)xXnucU Acceptor (ID 35066): Subst // Subst = naphthaleneacetic acid Status: evidence in vitro
Confirmation methods: in vitro (purified protein) ID: 1379 | Organism (ID 12415): Arabidopsis thaliana Organ/tissue: root, leaf, stem, flower, silique Full structure (ID 35106): | ||
| Enzyme name: 76B1 Gene name: UGT76B1 / AT3G11340 Gene GenBank ID: 820307 | Synthesized dimer: DGlcp(1-2)Subst // Subst = 2-hydroxy-3-methylpentanoic (isoleucic) acid Donor (ID 34839): ?DGlcp(1-P-P-5)xXnucU Acceptor (ID 35107): Subst // Subst = 2-hydroxy-3-methylpentanoic (isoleucic) acid Status: evidence in vitro
Confirmation methods: in vitro (purified protein) ID: 1380 Notes: The product is described as glucoside in the paper. | Organism (ID 12415): Arabidopsis thaliana Organ/tissue: leaf, seedling, root Full structure (ID 35108): | Von Saint Paul et al. 2011 DOI: 10.1105/tpc.111.088443 |
| Synthesized dimer: DGlcp(1-2)Sal Donor (ID 34839): ?DGlcp(1-P-P-5)xXnucU Acceptor (ID 35086): xXSal // Sal = 2-hydroxybenzoic (salicylic) acid Status: evidence in vitro
Confirmation methods: in vitro (purified protein) ID: 1381 Notes: The product is described as glucoside in the paper. | Organism (ID 12415): Arabidopsis thaliana Organ/tissue: leaf, seedling, root Full structure (ID 35109): | ||
| Enzyme name: 76C1 UniProt ID: Q9FI99.1 CAZy family: GT1 Gene name: UGT76C1 / AT5G05870 Gene GenBank ID: 830472 | Synthesized dimer: DGlcp(1-7)Subst // Subst = trans-zeatin = SMILES C/C(=C\CNC1=NC=NC2=C1{7}NC=N2)/{13}CO Donor (ID 34839): ?DGlcp(1-P-P-5)xXnucU Acceptor (ID 34987): Subst // Subst = trans-zeatin = SMILES C/C(=C\CNC1=NC=NC2=C1{7}NC=N2)/{13}CO Status: direct evidence in vivo
Confirmation methods: in vitro (purified protein), overexpression, mutation ID: 1382 Notes: Atom numeration is as given in the paper. | Organism (ID 12415): Arabidopsis thaliana Organ/tissue: seedling Full structure (ID 35110): | Hou et al. 2004 DOI: 10.1074/jbc.M409569200 Wang et al. 2013 DOI: 10.1016/j.plaphy.2013.01.012 Li et al. 2019a DOI: 10.1186/s12284-019-0279-9 |
| Synthesized dimer: DGlcp(1-9)Subst // Subst = trans-zeatin (9-protonated) = SMILES O{13}C/C(C)=C/CNC1=C2{7}NC={9}[N+]([H])C2=NC=N1 Donor (ID 34839): ?DGlcp(1-P-P-5)xXnucU Acceptor (ID 34987): Subst // Subst = trans-zeatin = SMILES C/C(=C\CNC1=NC=NC2=C1{7}NC=N2)/{13}CO Status: direct evidence in vivo
Confirmation methods: in vitro (purified protein), overexpression, mutation ID: 1383 Notes: Atom numeration is as given in the paper. | Organism (ID 12415): Arabidopsis thaliana Organ/tissue: seedling Full structure (ID 35111): | ||
| Synthesized dimer: DGlcp(1-9)Subst // Subst = dihydrozeatin (9-protonated) = SMILES O{13}CC(C)CCNC1=C2{7}NC={9}[N+]([H])C2=NC=N1 Donor (ID 34839): ?DGlcp(1-P-P-5)xXnucU Acceptor (ID 34989): Subst // Subst = dihydrozeatin = SMILES C/C(CCNC1=NC=NC2=C1{7}NC=N2)/{13}CO Status: evidence in vitro
Confirmation methods: in vitro (purified protein) ID: 1384 Notes: Atom numeration is as given in the paper. | Organism (ID 12415): Arabidopsis thaliana Organ/tissue: seedling Exact full structure is unknown | Hou et al. 2004 DOI: 10.1074/jbc.M409569200 Wang et al. 2013 DOI: 10.1016/j.plaphy.2013.01.012 | |
| Synthesized dimer: DGlcp(1-7)Subst // Subst = dihydrozeatin = SMILES C/C(CCNC1=NC=NC2=C1{7}NC=N2)/{13}CO Donor (ID 34839): ?DGlcp(1-P-P-5)xXnucU Acceptor (ID 34989): Subst // Subst = dihydrozeatin = SMILES C/C(CCNC1=NC=NC2=C1{7}NC=N2)/{13}CO Status: evidence in vitro
Confirmation methods: in vitro (purified protein) ID: 1385 Notes: Atom numeration is as given in the paper. | Organism (ID 12415): Arabidopsis thaliana Organ/tissue: seedling Full structure (ID 35112): | ||
| Synthesized dimer: DGlcp(1-7)Subst // Subst = N6-isopent-2-enyladenine = SMILES C/C(C)=C/CNC1=C2C(N=C{7}N2)=NC=N1 Donor (ID 34839): ?DGlcp(1-P-P-5)xXnucU Acceptor (ID 35113): Subst // Subst = N6-isopent-2-enyladenine = SMILES C/C(C)=C/CNC1=C2C(N=C{7}N2)=NC=N1 Status: direct evidence in vivo
Confirmation methods: in vitro (purified protein), mutation ID: 1386 Notes: Atom numeration is as given in the paper. | Organism (ID 12415): Arabidopsis thaliana Organ/tissue: seedling Full structure (ID 35114): | ||
| Synthesized dimer: DGlcp(1-9)Subst // Subst = N6-isopent-2-enyladenine (9-protonated) = SMILES C/C(C)=C/CNC1=C2C({9}[NH+]=C{7}N2)=NC=N1 Donor (ID 34839): ?DGlcp(1-P-P-5)xXnucU Acceptor (ID 35113): Subst // Subst = N6-isopent-2-enyladenine = SMILES C/C(C)=C/CNC1=C2C(N=C{7}N2)=NC=N1 Status: direct evidence in vivo
Confirmation methods: in vitro (purified protein), mutation ID: 1387 Notes: Atom numeration is as given in the paper. | Organism (ID 12415): Arabidopsis thaliana Organ/tissue: seedling Full structure (ID 35115): | ||
| Synthesized dimer: DGlcp(1-9)Subst // Subst = N6-benzyladenine (9-protonated) = SMILES C1(CNC2=C3C({9}[NH+]=C{7}N3)=NC=N2)=CC=CC=C1 Donor (ID 34839): ?DGlcp(1-P-P-5)xXnucU Acceptor (ID 35116): Subst // Subst = N6-benzyladenine = SMILES C1(CNC2=C3C(N=C{7}N3)=NC=N2)=CC=CC=C1 Status: evidence in vitro
Confirmation methods: in vitro (purified protein) ID: 1388 Notes: Atom numeration is as given in the paper. | Organism (ID 12415): Arabidopsis thaliana Organ/tissue: seedling Full structure (ID 35117): | Hou et al. 2004 DOI: 10.1074/jbc.M409569200 Wang et al. 2013 DOI: 10.1016/j.plaphy.2013.01.012 Li et al. 2019a DOI: 10.1186/s12284-019-0279-9 | |
| Synthesized dimer: DGlcp(1-7)Subst // Subst = N6-benzyladenine = SMILES C1(CNC2=C3C(N=C{7}N3)=NC=N2)=CC=CC=C1 Donor (ID 34839): ?DGlcp(1-P-P-5)xXnucU Acceptor (ID 35116): Subst // Subst = N6-benzyladenine = SMILES C1(CNC2=C3C(N=C{7}N3)=NC=N2)=CC=CC=C1 Status: evidence in vitro
Confirmation methods: in vitro (purified protein) ID: 1389 Notes: Atom numeration is as given in the paper. | Organism (ID 12415): Arabidopsis thaliana Organ/tissue: seedling Full structure (ID 35118): | ||
| Synthesized dimer: DGlcp(1-7)Subst // Subst = kinetin = SMILES C1(CNC2=C3C(N=C{7}N3)=NC=N2)=CC=CO1 Donor (ID 34839): ?DGlcp(1-P-P-5)xXnucU Acceptor (ID 35119): Subst // Subst = kinetin = SMILES C1(CNC2=C3C(N=C{7}N3)=NC=N2)=CC=CO1 Status: evidence in vitro
Confirmation methods: in vitro (purified protein) ID: 1390 Notes: Atom numeration is as given in the paper. | Organism (ID 12415): Arabidopsis thaliana Organ/tissue: seedling Full structure (ID 35120): | Hou et al. 2004 DOI: 10.1074/jbc.M409569200 Wang et al. 2013 DOI: 10.1016/j.plaphy.2013.01.012 | |
| Synthesized dimer: DGlcp(1-9)Subst // Subst = kinetin (9-protonated) = SMILES C1(CNC2=C3C({9}[NH+]=C{7}N3)=NC=N2)=CC=CO1 Donor (ID 34839): ?DGlcp(1-P-P-5)xXnucU Acceptor (ID 35119): Subst // Subst = kinetin = SMILES C1(CNC2=C3C(N=C{7}N3)=NC=N2)=CC=CO1 Status: evidence in vitro
Confirmation methods: in vitro (purified protein) ID: 1391 Notes: Atom numeration is as given in the paper. | Organism (ID 12415): Arabidopsis thaliana Organ/tissue: seedling Full structure (ID 35121): | ||
| Synthesized dimer: DGlcp(1-9)Subst // Subst = cis-zeatin (9-protonated) = SMILES O{14}C/C(C)=C\CNC1=C2{7}NC={9}[N+]([H])C2=NC=N1 Donor (ID 34839): ?DGlcp(1-P-P-5)xXnucU Acceptor (ID 34991): Subst // Subst = cis-zeatin = SMILES C/C(=C/CNC1=NC=NC2=C1{7}NC=N2)/{14}CO Status: evidence in vitro
Confirmation methods: in vitro (purified protein) ID: 1392 Notes: Atom numeration is as given in the paper. | Organism (ID 12415): Arabidopsis thaliana Organ/tissue: seedling Full structure (ID 35122): | ||
| Synthesized dimer: DGlcp(1-7)Subst // Subst = cis-zeatin = SMILES C/C(=C/CNC1=NC=NC2=C1{7}NC=N2)/{14}CO Donor (ID 34839): ?DGlcp(1-P-P-5)xXnucU Acceptor (ID 34991): Subst // Subst = cis-zeatin = SMILES C/C(=C/CNC1=NC=NC2=C1{7}NC=N2)/{14}CO Status: evidence in vitro
Confirmation methods: in vitro (purified protein) ID: 1393 Notes: Atom numeration is as given in the paper. | Organism (ID 12415): Arabidopsis thaliana Organ/tissue: seedling Full structure (ID 35123): | ||
| Synthesized dimer: DGlcp(1-7)Subst // Subst = trans-zeatin = SMILES C/C(=C\CNC1=NC=NC2=C1{7}NC=N2)/{13}CO Donor (ID 34839): ?DGlcp(1-P-P-5)xXnucU Acceptor (ID 35124): ?DGlcp(1-13)Subst // Subst = trans-zeatin = SMILES C/C(=C\CNC1=NC=NC2=C1{7}NC=N2)/{13}CO Status: evidence in vitro
Confirmation methods: in vitro (purified protein) ID: 1394 Notes: Atom numeration is as given in the paper. | Organism (ID 12415): Arabidopsis thaliana Organ/tissue: seedling Full structure (ID 35125): | ||
| Synthesized dimer: DGlcp(1-13)Subst // Subst = trans-zeatin = SMILES C/C(=C\CNC1=NC=NC2=C1{7}NC=N2)/{13}CO Donor (ID 34839): ?DGlcp(1-P-P-5)xXnucU Acceptor (ID 34987): Subst // Subst = trans-zeatin = SMILES C/C(=C\CNC1=NC=NC2=C1{7}NC=N2)/{13}CO Status: indirect evidence in vivo
Confirmation methods: mutation ID: 1395 Notes: Glc is linked to terminal OH group. | Organism (ID 12415): Arabidopsis thaliana Organ/tissue: seedling Full structure (ID 34988): | Wang et al. 2013 DOI: 10.1016/j.plaphy.2013.01.012 Smehilova et al. 2016 DOI: 10.3389/fpls.2016.01264 | |
| Synthesized dimer: DGlcp(1-14)Subst // Subst = cis-zeatin = SMILES C/C(=C/CNC1=NC=NC2=C1{7}NC=N2)/{14}CO Donor (ID 34839): ?DGlcp(1-P-P-5)xXnucU Acceptor (ID 34991): Subst // Subst = cis-zeatin = SMILES C/C(=C/CNC1=NC=NC2=C1{7}NC=N2)/{14}CO Status: indirect evidence in vivo
Confirmation methods: mutation ID: 1396 Notes: Glc is linked to terminal OH group. | Organism (ID 12415): Arabidopsis thaliana Organ/tissue: seedling Full structure (ID 27620): CSDB ID(s): 60882, 60887 | Smehilova et al. 2016 DOI: 10.3389/fpls.2016.01264 | |
| Synthesized dimer: DGlcp(1-13)Subst // Subst = dihydrozeatin = SMILES C/C(CCNC1=NC=NC2=C1{7}NC=N2)/{13}CO Donor (ID 34839): ?DGlcp(1-P-P-5)xXnucU Acceptor (ID 34989): Subst // Subst = dihydrozeatin = SMILES C/C(CCNC1=NC=NC2=C1{7}NC=N2)/{13}CO Status: indirect evidence in vivo
Confirmation methods: mutation ID: 1397 Notes: Glc is linked to terminal OH group. | Organism (ID 12415): Arabidopsis thaliana Organ/tissue: seedling Full structure (ID 34990): | ||
| Enzyme name: 76C2 UniProt ID: Q9FIA0.1 CAZy family: GT1 Gene name: UGT76C2 / AT5G05860 Gene GenBank ID: 830471 | Synthesized dimer: DGlcp(1-7)Subst // Subst = trans-zeatin = SMILES C/C(=C\CNC1=NC=NC2=C1{7}NC=N2)/{13}CO Donor (ID 34839): ?DGlcp(1-P-P-5)xXnucU Acceptor (ID 34987): Subst // Subst = trans-zeatin = SMILES C/C(=C\CNC1=NC=NC2=C1{7}NC=N2)/{13}CO Status: direct evidence in vivo
Confirmation methods: in vitro (purified protein), mutation, overexpression, mutation (knockout) ID: 1398 Notes: Atom numeration is as given in the paper. | Organism (ID 12415): Arabidopsis thaliana Organ/tissue: root, leaf, seedling, seed Full structure (ID 35110): | Hou et al. 2004 DOI: 10.1074/jbc.M409569200 Smehilova et al. 2016 DOI: 10.3389/fpls.2016.01264 Wang et al. 2011 DOI: 10.1093/pcp/pcr152 Lee et al. 2019 DOI: 10.1371/journal.pone.0219008 |
| Synthesized dimer: DGlcp(1-9)Subst // Subst = trans-zeatin (9-protonated) = SMILES O{13}C/C(C)=C/CNC1=C2{7}NC={9}[N+]([H])C2=NC=N1 Donor (ID 34839): ?DGlcp(1-P-P-5)xXnucU Acceptor (ID 34987): Subst // Subst = trans-zeatin = SMILES C/C(=C\CNC1=NC=NC2=C1{7}NC=N2)/{13}CO Status: direct evidence in vivo
Confirmation methods: in vitro (purified protein), mutation, overexpression, mutation (knockout) ID: 1399 Notes: Atom numeration is as given in the paper. | Organism (ID 12415): Arabidopsis thaliana Organ/tissue: root, leaf, seedling, seed Full structure (ID 35111): | ||
| Synthesized dimer: DGlcp(1-9)Subst // Subst = dihydrozeatin (9-protonated) = SMILES O{13}CC(C)CCNC1=C2{7}NC={9}[N+]([H])C2=NC=N1 Donor (ID 34839): ?DGlcp(1-P-P-5)xXnucU Acceptor (ID 34989): Subst // Subst = dihydrozeatin = SMILES C/C(CCNC1=NC=NC2=C1{7}NC=N2)/{13}CO Status: direct evidence in vivo
Confirmation methods: in vitro (purified protein), mutation (knockout) ID: 1400 Notes: Atom numeration is as given in the paper. | Organism (ID 12415): Arabidopsis thaliana Organ/tissue: root, leaf, seedling, seed Exact full structure is unknown | ||
| Synthesized dimer: DGlcp(1-7)Subst // Subst = dihydrozeatin = SMILES C/C(CCNC1=NC=NC2=C1{7}NC=N2)/{13}CO Donor (ID 34839): ?DGlcp(1-P-P-5)xXnucU Acceptor (ID 34989): Subst // Subst = dihydrozeatin = SMILES C/C(CCNC1=NC=NC2=C1{7}NC=N2)/{13}CO Status: direct evidence in vivo
Confirmation methods: in vitro (purified protein), mutation, mutation (knockout) ID: 1401 Notes: Atom numeration is as given in the paper. | Organism (ID 12415): Arabidopsis thaliana Organ/tissue: root, leaf, seedling, seed Full structure (ID 35112): | ||
| Synthesized dimer: DGlcp(1-7)Subst // Subst = N6-isopent-2-enyladenine = SMILES C/C(C)=C/CNC1=C2C(N=C{7}N2)=NC=N1 Donor (ID 34839): ?DGlcp(1-P-P-5)xXnucU Acceptor (ID 35113): Subst // Subst = N6-isopent-2-enyladenine = SMILES C/C(C)=C/CNC1=C2C(N=C{7}N2)=NC=N1 Status: direct evidence in vivo
Confirmation methods: in vitro (purified protein), mutation, overexpression ID: 1402 Notes: Atom numeration is as given in the paper. | Organism (ID 12415): Arabidopsis thaliana Organ/tissue: root, leaf, seedling, seed Full structure (ID 35114): | Hou et al. 2004 DOI: 10.1074/jbc.M409569200 Wang et al. 2011 DOI: 10.1093/pcp/pcr152 | |
| Synthesized dimer: DGlcp(1-9)Subst // Subst = N6-isopent-2-enyladenine (9-protonated) = SMILES C/C(C)=C/CNC1=C2C({9}[NH+]=C{7}N2)=NC=N1 Donor (ID 34839): ?DGlcp(1-P-P-5)xXnucU Acceptor (ID 35113): Subst // Subst = N6-isopent-2-enyladenine = SMILES C/C(C)=C/CNC1=C2C(N=C{7}N2)=NC=N1 Status: direct evidence in vivo
Confirmation methods: in vitro (purified protein), mutation, overexpression, mutation (knockout) ID: 1403 Notes: Atom numeration is as given in the paper. | Organism (ID 12415): Arabidopsis thaliana Organ/tissue: root, leaf, seedling, seed Full structure (ID 35115): | Hou et al. 2004 DOI: 10.1074/jbc.M409569200 Smehilova et al. 2016 DOI: 10.3389/fpls.2016.01264 Wang et al. 2011 DOI: 10.1093/pcp/pcr152 Lee et al. 2019 DOI: 10.1371/journal.pone.0219008 | |
| Synthesized dimer: DGlcp(1-9)Subst // Subst = N6-benzyladenine (9-protonated) = SMILES C1(CNC2=C3C({9}[NH+]=C{7}N3)=NC=N2)=CC=CC=C1 Donor (ID 34839): ?DGlcp(1-P-P-5)xXnucU Acceptor (ID 35116): Subst // Subst = N6-benzyladenine = SMILES C1(CNC2=C3C(N=C{7}N3)=NC=N2)=CC=CC=C1 Status: evidence in vitro
Confirmation methods: in vitro (purified protein) ID: 1404 Notes: Atom numeration is as given in the paper. | Organism (ID 12415): Arabidopsis thaliana Organ/tissue: root, leaf, seedling, seed Full structure (ID 35117): | Hou et al. 2004 DOI: 10.1074/jbc.M409569200 Wang et al. 2011 DOI: 10.1093/pcp/pcr152 | |
| Synthesized dimer: DGlcp(1-7)Subst // Subst = N6-benzyladenine = SMILES C1(CNC2=C3C(N=C{7}N3)=NC=N2)=CC=CC=C1 Donor (ID 34839): ?DGlcp(1-P-P-5)xXnucU Acceptor (ID 35116): Subst // Subst = N6-benzyladenine = SMILES C1(CNC2=C3C(N=C{7}N3)=NC=N2)=CC=CC=C1 Status: evidence in vitro
Confirmation methods: in vitro (purified protein) ID: 1405 Notes: Atom numeration is as given in the paper. | Organism (ID 12415): Arabidopsis thaliana Organ/tissue: root, leaf, seedling, seed Full structure (ID 35118): | ||
| Synthesized dimer: DGlcp(1-7)Subst // Subst = kinetin = SMILES C1(CNC2=C3C(N=C{7}N3)=NC=N2)=CC=CO1 Donor (ID 34839): ?DGlcp(1-P-P-5)xXnucU Acceptor (ID 35119): Subst // Subst = kinetin = SMILES C1(CNC2=C3C(N=C{7}N3)=NC=N2)=CC=CO1 Status: evidence in vitro
Confirmation methods: in vitro (purified protein) ID: 1406 Notes: Atom numeration is as given in the paper. | Organism (ID 12415): Arabidopsis thaliana Organ/tissue: root, leaf, seedling, seed Full structure (ID 35120): | ||
| Synthesized dimer: DGlcp(1-9)Subst // Subst = kinetin (9-protonated) = SMILES C1(CNC2=C3C({9}[NH+]=C{7}N3)=NC=N2)=CC=CO1 Donor (ID 34839): ?DGlcp(1-P-P-5)xXnucU Acceptor (ID 35119): Subst // Subst = kinetin = SMILES C1(CNC2=C3C(N=C{7}N3)=NC=N2)=CC=CO1 Status: evidence in vitro
Confirmation methods: in vitro (purified protein) ID: 1407 Notes: Atom numeration is as given in the paper. | Organism (ID 12415): Arabidopsis thaliana Organ/tissue: root, leaf, seedling, seed Full structure (ID 35121): | ||
| Synthesized dimer: DGlcp(1-9)Subst // Subst = cis-zeatin (9-protonated) = SMILES O{14}C/C(C)=C\CNC1=C2{7}NC={9}[N+]([H])C2=NC=N1 Donor (ID 34839): ?DGlcp(1-P-P-5)xXnucU Acceptor (ID 34991): Subst // Subst = cis-zeatin = SMILES C/C(=C/CNC1=NC=NC2=C1{7}NC=N2)/{14}CO Status: evidence in vitro
Confirmation methods: in vitro (purified protein) ID: 1408 Notes: Atom numeration is as given in the paper. | Organism (ID 12415): Arabidopsis thaliana Organ/tissue: root, leaf, seedling, seed Full structure (ID 35122): | ||
| Synthesized dimer: DGlcp(1-7)Subst // Subst = cis-zeatin = SMILES C/C(=C/CNC1=NC=NC2=C1{7}NC=N2)/{14}CO Donor (ID 34839): ?DGlcp(1-P-P-5)xXnucU Acceptor (ID 34991): Subst // Subst = cis-zeatin = SMILES C/C(=C/CNC1=NC=NC2=C1{7}NC=N2)/{14}CO Status: direct evidence in vivo
Confirmation methods: in vitro (purified protein), mutation ID: 1409 Notes: Atom numeration is as given in the paper. | Organism (ID 12415): Arabidopsis thaliana Organ/tissue: root, leaf, seedling, seed Full structure (ID 35123): | Hou et al. 2004 DOI: 10.1074/jbc.M409569200 Smehilova et al. 2016 DOI: 10.3389/fpls.2016.01264 Wang et al. 2011 DOI: 10.1093/pcp/pcr152 | |
| Synthesized dimer: DGlcp(1-7)Subst // Subst = trans-zeatin = SMILES C/C(=C\CNC1=NC=NC2=C1{7}NC=N2)/{13}CO Donor (ID 34839): ?DGlcp(1-P-P-5)xXnucU Acceptor (ID 35124): ?DGlcp(1-13)Subst // Subst = trans-zeatin = SMILES C/C(=C\CNC1=NC=NC2=C1{7}NC=N2)/{13}CO Status: evidence in vitro
Confirmation methods: in vitro (purified protein) ID: 1410 Notes: Atom numeration is as given in the paper. | Organism (ID 12415): Arabidopsis thaliana Organ/tissue: root, leaf, seedling, seed Full structure (ID 35125): | Hou et al. 2004 DOI: 10.1074/jbc.M409569200 Wang et al. 2011 DOI: 10.1093/pcp/pcr152 | |
| Enzyme name: 76C4 UniProt ID: Q9FI98.1 CAZy family: GT1 Gene name: At5g05880 Gene GenBank ID: 830473 | Synthesized dimer: DGlcp(1-1')Subst // Subst = nicotinic acid (N-linked) = SMILES O=C(O)C1=C{51}[N+]([H])=CC=C1 Donor (ID 34839): ?DGlcp(1-P-P-5)xXnucU Acceptor (ID 35126): Subst // Subst = nicotinic acid (N-linked) = SMILES O=C(O)C1=C{51}[N+]([H])=CC=C1 Status: direct evidence in vivo
Confirmation methods: in vitro (purified protein), mutation ID: 1411 Notes: N-conjugating activity towards nicotinic acid | Organism (ID 12415): Arabidopsis thaliana Organ/tissue: seed, seedling (root) Full structure (ID 35127): | Li et al. 2015 DOI: 10.1105/tpc.15.00223 Liu et al. 2019 DOI: 10.3389/fpls.2019.01164 |
| Enzyme name: 76C5 UniProt ID: Q9FI97.1 CAZy family: GT1 Gene name: AT5G05890 Gene GenBank ID: 830474 | Synthesized dimer: DGlcp(1-1')Subst // Subst = nicotinic acid (N-linked) = SMILES O=C(O)C1=C{51}[N+]([H])=CC=C1 Donor (ID 34839): ?DGlcp(1-P-P-5)xXnucU Acceptor (ID 35126): Subst // Subst = nicotinic acid (N-linked) = SMILES O=C(O)C1=C{51}[N+]([H])=CC=C1 Status: direct evidence in vivo
Confirmation methods: in vitro (purified protein), mutation, mutation (in vitro) ID: 1412 Notes: N-conjugating activity towards nicotinic acid | Organism (ID 12415): Arabidopsis thaliana Organ/tissue: seed, seedling (root) Full structure (ID 35127): | |
| Enzyme name: 76D1 UniProt ID: O48715.1 CAZy family: GT1 Gene name: UGT76D1 / AT2G26480 Gene GenBank ID: 817189 | Synthesized dimer: DGlcp(1-7)Quercetin Donor (ID 34839): ?DGlcp(1-P-P-5)xXnucU Acceptor (ID 34846): xXQuercetin Status: evidence in vitro
Confirmation methods: in vitro (purified protein) ID: 1413 | Organism (ID 12415): Arabidopsis thaliana Full structure (ID 34984): | Lim et al. 2004 DOI: 10.1002/bit.20154 |
| Synthesized dimer: DGlcp(1-7)Subst // Subst = esculetin Donor (ID 34839): ?DGlcp(1-P-P-5)xXnucU Acceptor (ID 34847): Subst // Subst = esculetin Status: evidence in vitro
Confirmation methods: in vitro (purified protein) ID: 1414 Notes: NC: cichoriin | Organism (ID 12415): Arabidopsis thaliana Full structure (ID 34848): | Lim et al. 2003a DOI: 10.1093/glycob/cwg017 | |
| Synthesized dimer: DGlcp(1-7)Subst // Subst = scopoletin Donor (ID 34839): ?DGlcp(1-P-P-5)xXnucU Acceptor (ID 34849): Subst // Subst = scopoletin Status: evidence in vitro
Confirmation methods: in vitro (purified protein) ID: 1415 Notes: NC: scopolin | Organism (ID 12415): Arabidopsis thaliana Full structure (ID 34850): | ||
| Synthesized dimer: DGlcp(1-1)Subst // Subst = 2,4,5-trichlorophenol Donor (ID 34839): ?DGlcp(1-P-P-5)xXnucU Acceptor (ID 34851): Subst // Subst = 2,4,5-trichlorophenol Status: evidence in vitro
Confirmation methods: in vitro (crude extract) ID: 1416 Notes: Low activity towards 2,4,5-trichlorophenol | Organism (ID 12415): Arabidopsis thaliana Full structure (ID 34852): | Brazier-Hicks et al. 2007 DOI: 10.1073/pnas.0706421104 | |
| Enzyme name: 76E1 UniProt ID: Q9LTH3.1 CAZy family: GT1 Gene name: UGT76E1 / AT5G59580 Gene GenBank ID: 836077 | Synthesized dimer: DGlcp(1-7)Quercetin Donor (ID 34839): ?DGlcp(1-P-P-5)xXnucU Acceptor (ID 34846): xXQuercetin Status: evidence in vitro
Confirmation methods: in vitro (purified protein) ID: 1417 | Organism (ID 12415): Arabidopsis thaliana Full structure (ID 34984): | Lim et al. 2004 DOI: 10.1002/bit.20154 |
| Synthesized dimer: DGlcp(1-3)Quercetin Donor (ID 34839): ?DGlcp(1-P-P-5)xXnucU Acceptor (ID 34846): xXQuercetin Status: evidence in vitro
Confirmation methods: in vitro (purified protein) ID: 1418 | Organism (ID 12415): Arabidopsis thaliana Full structure (ID 34960): | ||
| Synthesized dimer: DGlcp(1-7)Subst // Subst = esculetin Donor (ID 34839): ?DGlcp(1-P-P-5)xXnucU Acceptor (ID 34847): Subst // Subst = esculetin Status: evidence in vitro
Confirmation methods: in vitro (purified protein) ID: 1419 Notes: NC: cichoriin | Organism (ID 12415): Arabidopsis thaliana Full structure (ID 34848): | Lim et al. 2003a DOI: 10.1093/glycob/cwg017 | |
| Synthesized dimer: DGlcp(1-7)Subst // Subst = scopoletin Donor (ID 34839): ?DGlcp(1-P-P-5)xXnucU Acceptor (ID 34849): Subst // Subst = scopoletin Status: evidence in vitro
Confirmation methods: in vitro (purified protein) ID: 1420 Notes: NC: scopolin | Organism (ID 12415): Arabidopsis thaliana Full structure (ID 34850): | ||
| Synthesized dimer: DGlcp(1-?)Kaempferol Donor (ID 34839): ?DGlcp(1-P-P-5)xXnucU Acceptor (ID 34951): xXKaempferol Status: evidence in vitro
Confirmation methods: in vitro (purified protein) ID: 1421 | Organism (ID 12415): Arabidopsis thaliana Full structure (ID 35013): | Majeed et al. 2014 DOI: 10.17957/IJAB/15.0044 | |
| Synthesized dimer: DGlcp(1-?)Subst // Subst = novobiocin Donor (ID 34839): ?DGlcp(1-P-P-5)xXnucU Acceptor (ID 35133): Subst // Subst = novobiocin Status: evidence in vitro
Confirmation methods: in vitro (purified protein) ID: 1422 | Organism (ID 12415): Arabidopsis thaliana Full structure (ID 35134): | ||
| Synthesized dimer: DGlcp(1-1)Subst // Subst = 2,4,5-trichlorophenol Donor (ID 34839): ?DGlcp(1-P-P-5)xXnucU Acceptor (ID 34851): Subst // Subst = 2,4,5-trichlorophenol Status: evidence in vitro
Confirmation methods: in vitro (crude extract) ID: 1423 | Organism (ID 12415): Arabidopsis thaliana Full structure (ID 34852): | Brazier-Hicks et al. 2007 DOI: 10.1073/pnas.0706421104 | |
| Synthesized dimer: DGlcp(1-1)Subst // Subst = 4-chlorothiophenol Donor (ID 34839): ?DGlcp(1-P-P-5)xXnucU Acceptor (ID 34855): Subst // Subst = 4-chlorothiophenol Status: evidence in vitro
Confirmation methods: in vitro (crude extract) ID: 1424 Notes: Low S-conjugating activity towards 4-chlorothiophenol | Organism (ID 12415): Arabidopsis thaliana Full structure (ID 34856): | ||
| Enzyme name: 76E2 UniProt ID: Q9LTH2.1 CAZy family: GT1 Gene name: UGT76E2 / AT5G59590 Gene GenBank ID: 836078 | Synthesized dimer: DGlcp(1-7)Quercetin Donor (ID 34839): ?DGlcp(1-P-P-5)xXnucU Acceptor (ID 34846): xXQuercetin Status: evidence in vitro
Confirmation methods: in vitro (purified protein) ID: 1425 | Organism (ID 12415): Arabidopsis thaliana Full structure (ID 34984): | Lim et al. 2004 DOI: 10.1002/bit.20154 |
| Synthesized dimer: DGlcp(1-3)Quercetin Donor (ID 34839): ?DGlcp(1-P-P-5)xXnucU Acceptor (ID 34846): xXQuercetin Status: evidence in vitro
Confirmation methods: in vitro (purified protein) ID: 1426 | Organism (ID 12415): Arabidopsis thaliana Full structure (ID 34960): | ||
| Synthesized dimer: DGlcp(1-7)Subst // Subst = esculetin Donor (ID 34839): ?DGlcp(1-P-P-5)xXnucU Acceptor (ID 34847): Subst // Subst = esculetin Status: evidence in vitro
Confirmation methods: in vitro (purified protein) ID: 1427 Notes: NC: cichoriin | Organism (ID 12415): Arabidopsis thaliana Full structure (ID 34848): | Lim et al. 2003a DOI: 10.1093/glycob/cwg017 | |
| Synthesized dimer: DGlcp(1-7)Subst // Subst = scopoletin Donor (ID 34839): ?DGlcp(1-P-P-5)xXnucU Acceptor (ID 34849): Subst // Subst = scopoletin Status: evidence in vitro
Confirmation methods: in vitro (purified protein) ID: 1428 Notes: NC: scopolin | Organism (ID 12415): Arabidopsis thaliana Full structure (ID 34850): | ||
| Synthesized dimer: DGlcp(1-1)Subst // Subst = 2,4,5-trichlorophenol Donor (ID 34839): ?DGlcp(1-P-P-5)xXnucU Acceptor (ID 34851): Subst // Subst = 2,4,5-trichlorophenol Status: evidence in vitro
Confirmation methods: in vitro (crude extract) ID: 1429 | Organism (ID 12415): Arabidopsis thaliana Full structure (ID 34852): | Brazier-Hicks et al. 2007 DOI: 10.1073/pnas.0706421104 | |
| Synthesized dimer: DGlcp(1-1)Subst // Subst = 4-chlorothiophenol Donor (ID 34839): ?DGlcp(1-P-P-5)xXnucU Acceptor (ID 34855): Subst // Subst = 4-chlorothiophenol Status: evidence in vitro
Confirmation methods: in vitro (crude extract) ID: 1430 Notes: S-conjugating activity towards 4-chlorothiophenol | Organism (ID 12415): Arabidopsis thaliana Full structure (ID 34856): | ||
| Enzyme name: 76E11 UniProt ID: Q9SNB1.1 CAZy family: GT1 Gene name: UGT76E11 / AT3G46670 Gene GenBank ID: 823820 | Synthesized dimer: DGlcp(1-7)Quercetin Donor (ID 34839): ?DGlcp(1-P-P-5)xXnucU Acceptor (ID 34846): xXQuercetin Status: evidence in vitro
Confirmation methods: in vitro (purified protein) ID: 1431 | Organism (ID 12415): Arabidopsis thaliana Full structure (ID 34984): | Lim et al. 2004 DOI: 10.1002/bit.20154 |
| Synthesized dimer: DGlcp(1-3)Quercetin Donor (ID 34839): ?DGlcp(1-P-P-5)xXnucU Acceptor (ID 34846): xXQuercetin Status: evidence in vitro
Confirmation methods: in vitro (purified protein) ID: 1432 | Organism (ID 12415): Arabidopsis thaliana Full structure (ID 34960): | ||
| Synthesized dimer: DGlcp(1-7)Subst // Subst = esculetin Donor (ID 34839): ?DGlcp(1-P-P-5)xXnucU Acceptor (ID 34847): Subst // Subst = esculetin Status: evidence in vitro
Confirmation methods: in vitro (purified protein) ID: 1433 Notes: NC: cichoriin | Organism (ID 12415): Arabidopsis thaliana Full structure (ID 34848): | Lim et al. 2003a DOI: 10.1093/glycob/cwg017 | |
| Synthesized dimer: DGlcp(1-7)Subst // Subst = scopoletin Donor (ID 34839): ?DGlcp(1-P-P-5)xXnucU Acceptor (ID 34849): Subst // Subst = scopoletin Status: evidence in vitro
Confirmation methods: in vitro (purified protein) ID: 1434 Notes: NC: scopolin | Organism (ID 12415): Arabidopsis thaliana Full structure (ID 34850): | ||
| Synthesized dimer: DGlcp(1-1)Subst // Subst = 2,4,5-trichlorophenol Donor (ID 34839): ?DGlcp(1-P-P-5)xXnucU Acceptor (ID 34851): Subst // Subst = 2,4,5-trichlorophenol Status: evidence in vitro
Confirmation methods: in vitro (crude extract) ID: 1435 | Organism (ID 12415): Arabidopsis thaliana Full structure (ID 34852): | Brazier-Hicks et al. 2007 DOI: 10.1073/pnas.0706421104 | |
| Synthesized dimer: DGlcp(1-1)Subst // Subst = 4-chlorothiophenol Donor (ID 34839): ?DGlcp(1-P-P-5)xXnucU Acceptor (ID 34855): Subst // Subst = 4-chlorothiophenol Status: evidence in vitro
Confirmation methods: in vitro (crude extract) ID: 1436 Notes: S-conjugating activity towards 4-chlorothiophenol | Organism (ID 12415): Arabidopsis thaliana Full structure (ID 34856): | ||
| Enzyme name: 76E12 UniProt ID: Q94AB5.1 CAZy family: GT1 Gene name: UGT76E12 / AT3G46660 Gene GenBank ID: 823819 | Synthesized dimer: DGlcp(1-7)Quercetin Donor (ID 34839): ?DGlcp(1-P-P-5)xXnucU Acceptor (ID 34846): xXQuercetin Status: evidence in vitro
Confirmation methods: in vitro (purified protein), expression in E.coli (as whole-cell biocatalyst) ID: 1437 | Organism (ID 12415): Arabidopsis thaliana Expressed in: E. coli Full structure (ID 34984): | Lim et al. 2004 DOI: 10.1002/bit.20154 |
| Synthesized dimer: DGlcp(1-3)Quercetin Donor (ID 34839): ?DGlcp(1-P-P-5)xXnucU Acceptor (ID 34846): xXQuercetin Status: evidence in vitro
Confirmation methods: in vitro (purified protein), expression in E.coli (as whole-cell biocatalyst) ID: 1438 | Organism (ID 12415): Arabidopsis thaliana Expressed in: E. coli Full structure (ID 34960): | ||
| Synthesized dimer: DGlcp(1-3)Quercetin Donor (ID 34839): ?DGlcp(1-P-P-5)xXnucU Acceptor (ID 35143): ?DGlcp(1-7)xXQuercetin Status: evidence in vitro
Confirmation methods: in vitro (purified protein), expression in E.coli (as whole-cell biocatalyst) ID: 1439 Notes: 76E12 can produce quercetin 7,3-di-O-glucoside; the order of the glucose addition is ambiguous. | Organism (ID 12415): Arabidopsis thaliana Expressed in: E. coli Full structure (ID 35144): | ||
| Synthesized dimer: DGlcp(1-7)Quercetin Donor (ID 34839): ?DGlcp(1-P-P-5)xXnucU Acceptor (ID 35145): ?DGlcp(1-3)xXQuercetin Status: evidence in vitro
Confirmation methods: in vitro (purified protein), expression in E.coli (as whole-cell biocatalyst) ID: 1440 Notes: 76E12 can produce quercetin 7,3-di-O-glucoside; the order of the glucose addition is ambiguous. | Organism (ID 12415): Arabidopsis thaliana Expressed in: E. coli Full structure (ID 35144): | ||
| Synthesized dimer: DGlcp(1-7)Subst // Subst = esculetin Donor (ID 34839): ?DGlcp(1-P-P-5)xXnucU Acceptor (ID 34847): Subst // Subst = esculetin Status: evidence in vitro
Confirmation methods: in vitro (purified protein) ID: 1441 Notes: NC: cichoriin | Organism (ID 12415): Arabidopsis thaliana Full structure (ID 34848): | Lim et al. 2003a DOI: 10.1093/glycob/cwg017 | |
| Synthesized dimer: DGlcp(1-7)Subst // Subst = scopoletin Donor (ID 34839): ?DGlcp(1-P-P-5)xXnucU Acceptor (ID 34849): Subst // Subst = scopoletin Status: evidence in vitro
Confirmation methods: in vitro (purified protein) ID: 1442 Notes: NC: scopolin | Organism (ID 12415): Arabidopsis thaliana Full structure (ID 34850): | ||
| Synthesized dimer: DGlcp(1-1)Subst // Subst = 2,4,5-trichlorophenol Donor (ID 34839): ?DGlcp(1-P-P-5)xXnucU Acceptor (ID 34851): Subst // Subst = 2,4,5-trichlorophenol Status: evidence in vitro
Confirmation methods: in vitro (crude extract) ID: 1443 | Organism (ID 12415): Arabidopsis thaliana Full structure (ID 34852): | Brazier-Hicks et al. 2007 DOI: 10.1073/pnas.0706421104 | |
| Synthesized dimer: DGlcp(1-1)Subst // Subst = 3,4-dichloroaniline Donor (ID 34839): ?DGlcp(1-P-P-5)xXnucU Acceptor (ID 34886): Subst // Subst = 3,4-dichloroaniline Status: evidence in vitro
Confirmation methods: in vitro (crude extract) ID: 1444 Notes: Low N-conjugating activity towards 3,4-dichloroaniline | Organism (ID 12415): Arabidopsis thaliana Full structure (ID 34887): | ||
| Enzyme name: 78D1 UniProt ID: Q9S9P6.1 CAZy family: GT1 Gene name: UGT78D1 / AT1G30530 Gene GenBank ID: 839933 | Synthesized dimer: bDGlcp(1-3)Quercetin Donor (ID 34839): ?DGlcp(1-P-P-5)xXnucU Acceptor (ID 34846): xXQuercetin Status: evidence in vitro
Confirmation methods: in vitro (purified protein), expression in E.coli (as whole-cell biocatalyst) ID: 1445 | Organism (ID 12415): Arabidopsis thaliana Expressed in: E. coli; leaf, flower, silique, stem Full structure (ID 19231): CSDB ID(s): 44612, 46693, 47475, 48669, 48941, 60081, 60203, 60273, 60908, 61152, 61413, 61821, 62231, 63006, 63205, 63329, 63829, 64121, 64673, 64772, 64781, 64887, 64953, 65376, 65396, 65565, 65724, 65828, 65928, 65944, 65954, 65977, 65989, 66185, 66208, 66350, 66379, 66413, 66519, 66554, 66580, 66938, 66944, 67032, 67190, 67294, 67570, 67580, 67607, 67635, 67646, 67720, 67766, 67864, 67926, 67995, 68004, 68170, 68616, 68651, 68741, 68865, 120586, 131302, 139116, 146361, 146591, 146662, 146676, 146799, 270704, 270775 | Lim et al. 2004 DOI: 10.1002/bit.20154 Jones et al. 2003 DOI: 10.1074/jbc.M303523200 Ren et al. 2012 DOI: 10.1007/s10719-012-9410-5 Mo et al. 2016 DOI: 10.1039/c6ra16251g |
| Synthesized dimer: LRhap(1-3)Quercetin Donor (ID 35148): ?LRhap(1-P-P-5)xXnucU Acceptor (ID 34846): xXQuercetin Status: direct evidence in vivo
Confirmation methods: in vitro (crude extract), mutation, expression in E.coli, in vitro (purified protein) ID: 1446 Notes: NC: quercetrin | Organism (ID 12415): Arabidopsis thaliana Expressed in: E. coli; leaf, flower, silique, stem Full structure (ID 35149): | Jones et al. 2003 DOI: 10.1074/jbc.M303523200 Mo et al. 2016 DOI: 10.1039/c6ra16251g Kim et al. 2013a DOI: 10.1007/s00253-013-4844-7 Lim et al. 2006b DOI: 10.1002/cbic.200600193 | |
| Synthesized dimer: D6dAllp(1-3)Quercetin Donor (ID 35150): ?D6dAllp(1-P-P-5)xXnucT Acceptor (ID 34846): xXQuercetin Status: evidence in vitro
Confirmation methods: expression in E.coli (as whole-cell biocatalyst) ID: 1447 | Organism (ID 12415): Arabidopsis thaliana Expressed in: E. coli Full structure (ID 35151): | Simkhada et al. 2010 DOI: 10.1002/bit.22782 | |
| Synthesized dimer: LRhap(1-3)Kaempferol Donor (ID 35148): ?LRhap(1-P-P-5)xXnucU Acceptor (ID 34951): xXKaempferol Status: direct evidence in vivo
Confirmation methods: in vitro (crude extract), mutation, expression in E.coli (as whole-cell biocatalyst), in vitro (purified protein) ID: 1448 | Organism (ID 12415): Arabidopsis thaliana Expressed in: E. coli; leaf, flower, silique, stem Full structure (ID 35152): | Jones et al. 2003 DOI: 10.1074/jbc.M303523200 Mo et al. 2016 DOI: 10.1039/c6ra16251g Kim et al. 2012a DOI: 10.1021/jf302123c | |
| Synthesized dimer: LRhap(1-3)Kaempferol Donor (ID 35153): ?LRhap(1-P-P-5)xXnucdT Acceptor (ID 34951): xXKaempferol Status: evidence in vitro
Confirmation methods: expression in E.coli (as whole-cell biocatalyst) ID: 1449 | Organism (ID 12415): Arabidopsis thaliana Expressed in: E. coli Full structure (ID 35152): | Simkhada et al. 2010 DOI: 10.1002/bit.22782 | |
| Synthesized dimer: bDGlcp(1-3)Kaempferol Donor (ID 34839): ?DGlcp(1-P-P-5)xXnucU Acceptor (ID 34951): xXKaempferol Status: direct evidence in vivo
Confirmation methods: in vitro (crude extract), mutation, in vitro (purified protein) ID: 1450 | Organism (ID 12415): Arabidopsis thaliana Organ/tissue: leaf, flower, silique, stem Full structure (ID 20137): CSDB ID(s): 46694, 47474, 60897, 60910, 61848, 62230, 62517, 63013, 63185, 63327, 63828, 63861, 63963, 64672, 64912, 65380, 65446, 65975, 66411, 66427, 66432, 66441, 66501, 66518, 66593, 66755, 66906, 67296, 67311, 67467, 67579, 67606, 67645, 67697, 67925, 67998, 68005, 68832, 68997, 120166, 120585, 139117, 146367, 146663, 147282, 245850, 270774 | Jones et al. 2003 DOI: 10.1074/jbc.M303523200 Ren et al. 2012 DOI: 10.1007/s10719-012-9410-5 Mo et al. 2016 DOI: 10.1039/c6ra16251g | |
| Synthesized dimer: aLRhap(1-3)Quercetin Donor (ID 35154): bLRhap(1-P-P-5)xXnucdT Acceptor (ID 34846): xXQuercetin Status: direct evidence in vivo
Confirmation methods: in vitro (crude extract), mutation, expression in E.coli (as whole-cell biocatalyst) ID: 1451 Notes: NC: quercetrin | Organism (ID 12415): Arabidopsis thaliana Expressed in: E. coli; leaf, flower, silique, stem Full structure (ID 22021): CSDB ID(s): 50530, 60061, 60256, 60259, 60394, 60914, 61150, 61731, 61855, 62554, 63008, 63741, 64752, 64775, 64784, 65048, 65379, 65829, 65854, 65927, 65942, 65979, 66133, 66188, 66190, 66415, 66506, 66515, 66579, 66894, 66945, 67191, 67216, 67291, 67293, 67582, 67609, 67634, 67721, 67996, 68029, 68085, 68171, 68847, 68864, 139118, 146588, 146673, 146798, 146807, 245636 | Jones et al. 2003 DOI: 10.1074/jbc.M303523200 Kim et al. 2013a DOI: 10.1007/s00253-013-4844-7 Lim et al. 2006b DOI: 10.1002/cbic.200600193 Simkhada et al. 2010 DOI: 10.1002/bit.22782 Kim et al. 2012a DOI: 10.1021/jf302123c | |
| Synthesized dimer: bDGlcp(1-3)Quercetin Donor (ID 35155): aDGlcp(1-P-P-5)xXnucdT Acceptor (ID 34846): xXQuercetin Status: evidence in vitro
Confirmation methods: expression in E.coli (as whole-cell biocatalyst) ID: 1452 | Organism (ID 12415): Arabidopsis thaliana Expressed in: E. coli; leaf, flower, silique, stem Full structure (ID 19231): CSDB ID(s): 44612, 46693, 47475, 48669, 48941, 60081, 60203, 60273, 60908, 61152, 61413, 61821, 62231, 63006, 63205, 63329, 63829, 64121, 64673, 64772, 64781, 64887, 64953, 65376, 65396, 65565, 65724, 65828, 65928, 65944, 65954, 65977, 65989, 66185, 66208, 66350, 66379, 66413, 66519, 66554, 66580, 66938, 66944, 67032, 67190, 67294, 67570, 67580, 67607, 67635, 67646, 67720, 67766, 67864, 67926, 67995, 68004, 68170, 68616, 68651, 68741, 68865, 120586, 131302, 139116, 146361, 146591, 146662, 146676, 146799, 270704, 270775 | Jones et al. 2003 DOI: 10.1074/jbc.M303523200 Lim et al. 2006b DOI: 10.1002/cbic.200600193 | |
| Synthesized dimer: bXylp(1-3)Quercetin Donor (ID 35156): a?Xylp(1-P-P-5)xXnucU Acceptor (ID 34846): xXQuercetin Status: evidence in vitro
Confirmation methods: expression in E.coli (as whole-cell biocatalyst) ID: 1453 | Organism (ID 12415): Arabidopsis thaliana Expressed in: E. coli Full structure (ID 35157): | Pandey et al. 2013 DOI: 10.1007/s00253-012-4438-9 | |
| Synthesized dimer: bDFucp4N(1-3)Quercetin Donor (ID 35158): aDFucp4N(1-P-P-5)xXnucdT Acceptor (ID 34846): xXQuercetin Status: evidence in vitro
Confirmation methods: expression in E.coli (as whole-cell biocatalyst) ID: 1454 | Organism (ID 12415): Arabidopsis thaliana Expressed in: E. coli Full structure (ID 35159): | Pandey et al. 2015 DOI: 10.1016/j.bej.2015.05.017 | |
| Synthesized dimer: bDFucp4N(1-3)Kaempferol Donor (ID 35158): aDFucp4N(1-P-P-5)xXnucdT Acceptor (ID 34951): xXKaempferol Status: evidence in vitro
Confirmation methods: expression in E.coli (as whole-cell biocatalyst) ID: 1455 | Organism (ID 12415): Arabidopsis thaliana Expressed in: E. coli Full structure (ID 35160): | ||
| Synthesized dimer: bDFucp3N(1-3)Quercetin Donor (ID 35161): aDFucp3N(1-P-P-5)xXnucdT Acceptor (ID 34846): xXQuercetin Status: evidence in vitro
Confirmation methods: expression in E.coli (as whole-cell biocatalyst) ID: 1456 | Organism (ID 12415): Arabidopsis thaliana Expressed in: E. coli Full structure (ID 35162): | ||
| Synthesized dimer: bDFucp3N(1-3)Kaempferol Donor (ID 35161): aDFucp3N(1-P-P-5)xXnucdT Acceptor (ID 34951): xXKaempferol Status: evidence in vitro
Confirmation methods: expression in E.coli (as whole-cell biocatalyst) ID: 1457 | Organism (ID 12415): Arabidopsis thaliana Expressed in: E. coli Full structure (ID 35163): | ||
| Synthesized dimer: aLRhap(1-3)Myricetin Donor (ID 35164): aLRhap(1-P-P-5)xXnucT Acceptor (ID 35165): xXMyricetin Status: evidence in vitro
Confirmation methods: expression in E.coli (as whole-cell biocatalyst) ID: 1458 | Organism (ID 12415): Arabidopsis thaliana Expressed in: E. coli; leaf, flower, silique, stem Full structure (ID 26586): CSDB ID(s): 60063, 61932, 63047, 65122, 65853, 65923, 65945, 66182, 66191, 66242, 66418, 66505, 66508, 66895, 67583, 67610, 67637, 68086, 146594, 146797 | Jones et al. 2003 DOI: 10.1074/jbc.M303523200 Thuan et al. 2013a DOI: 10.1007/s12010-013-0459-9 | |
| Synthesized dimer: bDGlcp(1-3)Myricetin Donor (ID 34839): ?DGlcp(1-P-P-5)xXnucU Acceptor (ID 35165): xXMyricetin Status: evidence in vitro
Confirmation methods: in vitro (purified protein) ID: 1459 | Organism (ID 12415): Arabidopsis thaliana Organ/tissue: leaf, flower, silique, stem Full structure (ID 21530): CSDB ID(s): 49666, 65982, 66181, 68006, 146596 | Jones et al. 2003 DOI: 10.1074/jbc.M303523200 Ren et al. 2012 DOI: 10.1007/s10719-012-9410-5 | |
| Synthesized dimer: bDGlcp(1-3)Subst // Subst = fisetin = SMILES O=C1{3}C(O)=C(OC2=C1C=C{7}C(O)=C2)C3=CC={54}C({53}C(O)=C3)O Donor (ID 34839): ?DGlcp(1-P-P-5)xXnucU Acceptor (ID 35166): Subst // Subst = fisetin = SMILES O=C1{3}C(O)=C(OC2=C1C=C{7}C(O)=C2)C3=CC={54}C({53}C(O)=C3)O Status: evidence in vitro
Confirmation methods: in vitro (purified protein) ID: 1460 | Organism (ID 12415): Arabidopsis thaliana Organ/tissue: leaf, flower, silique, stem Full structure (ID 18829): CSDB ID(s): 42904 | Jones et al. 2003 DOI: 10.1074/jbc.M303523200 Ren et al. 2012 DOI: 10.1007/s10719-012-9410-5 Mo et al. 2016 DOI: 10.1039/c6ra16251g | |
| Synthesized dimer: LRhap(1-?)Subst // Subst = fisetin = SMILES O=C1{3}C(O)=C(OC2=C1C=C{7}C(O)=C2)C3=CC={54}C({53}C(O)=C3)O Donor (ID 35148): ?LRhap(1-P-P-5)xXnucU Acceptor (ID 35166): Subst // Subst = fisetin = SMILES O=C1{3}C(O)=C(OC2=C1C=C{7}C(O)=C2)C3=CC={54}C({53}C(O)=C3)O Status: evidence in vitro
Confirmation methods: in vitro (purified protein) ID: 1461 | Organism (ID 12415): Arabidopsis thaliana Organ/tissue: leaf, flower, silique, stem Full structure (ID 35167): | ||
| Synthesized dimer: bDGlcp(1-3)Subst // Subst = isorhamnetin = SMILES O{3}C1=C(C2=CC={54}C(O)C(OC)=C2)OC3=C({5}C(O)=C{7}C(O)=C3)C1=O Donor (ID 34839): ?DGlcp(1-P-P-5)xXnucU Acceptor (ID 34965): Subst // Subst = isorhamnetin = SMILES O{3}C1=C(C2=CC={54}C(O)C(OC)=C2)OC3=C({5}C(O)=C{7}C(O)=C3)C1=O Status: evidence in vitro
Confirmation methods: in vitro (purified protein) ID: 1462 | Organism (ID 12415): Arabidopsis thaliana Organ/tissue: leaf, flower, silique, stem Full structure (ID 25680): CSDB ID(s): 60917, 63211, 63862, 64954, 65401, 66134, 66343, 66521, 67312, 67744, 68862, 68996, 146363 | Jones et al. 2003 DOI: 10.1074/jbc.M303523200 Ren et al. 2012 DOI: 10.1007/s10719-012-9410-5 | |
| Synthesized dimer: LRhap(1-?)Subst // Subst = baicalein = SMILES O=C1C=C(C2=CC=CC=C2)OC3=C1{5}C(O)={6}C(O){7}C(O)=C3 Donor (ID 35148): ?LRhap(1-P-P-5)xXnucU Acceptor (ID 35168): Subst // Subst = baicalein = SMILES O=C1C=C(C2=CC=CC=C2)OC3=C1{5}C(O)={6}C(O){7}C(O)=C3 Status: evidence in vitro
Confirmation methods: in vitro (purified protein) ID: 1463 | Organism (ID 12415): Arabidopsis thaliana Organ/tissue: leaf, flower, silique, stem Full structure (ID 35169): | Mo et al. 2016 DOI: 10.1039/c6ra16251g | |
| Synthesized dimer: bDGlcp(1-7)Subst // Subst = baicalein = SMILES O=C1C=C(C2=CC=CC=C2)OC3=C1{5}C(O)={6}C(O){7}C(O)=C3 Donor (ID 34839): ?DGlcp(1-P-P-5)xXnucU Acceptor (ID 35168): Subst // Subst = baicalein = SMILES O=C1C=C(C2=CC=CC=C2)OC3=C1{5}C(O)={6}C(O){7}C(O)=C3 Status: evidence in vitro
Confirmation methods: in vitro (purified protein) ID: 1464 | Organism (ID 12415): Arabidopsis thaliana Organ/tissue: leaf, flower, silique, stem Full structure (ID 26948): CSDB ID(s): 60033, 62422 | ||
| Synthesized dimer: LRhap(1-?)Subst // Subst = diosmetin = SMILES COC1={53}C(O)C=C(C2=CC(C3={5}C(O){6}C={7}C(O){8}C=C3O2)=O)C=C1 Donor (ID 35148): ?LRhap(1-P-P-5)xXnucU Acceptor (ID 35170): Subst // Subst = diosmetin = SMILES COC1={53}C(O)C=C(C2=CC(C3={5}C(O){6}C={7}C(O){8}C=C3O2)=O)C=C1 Status: evidence in vitro
Confirmation methods: in vitro (purified protein) ID: 1465 | Organism (ID 12415): Arabidopsis thaliana Organ/tissue: leaf, flower, silique, stem Full structure (ID 35171): | ||
| Synthesized dimer: LRhap(1-?)Subst // Subst = chrysin = SMILES O=C1C=C(OC2=C1{5}C(O)=C{7}C(O)=C2)C3=CC=CC=C3 Donor (ID 35148): ?LRhap(1-P-P-5)xXnucU Acceptor (ID 35028): Subst // Subst = chrysin = SMILES O=C1C=C(OC2=C1{5}C(O)=C{7}C(O)=C2)C3=CC=CC=C3 Status: evidence in vitro
Confirmation methods: in vitro (purified protein) ID: 1466 | Organism (ID 12415): Arabidopsis thaliana Organ/tissue: leaf, flower, silique, stem Full structure (ID 35172): | ||
| Synthesized dimer: LRhap(1-?)Subst // Subst = pinocembrin = SMILES O=C1CC(OC2=C1{5}C(O)=C{7}C(O)=C2)C3=CC=CC=C3 Donor (ID 35148): ?LRhap(1-P-P-5)xXnucU Acceptor (ID 35173): Subst // Subst = pinocembrin = SMILES O=C1CC(OC2=C1{5}C(O)=C{7}C(O)=C2)C3=CC=CC=C3 Status: evidence in vitro
Confirmation methods: in vitro (purified protein) ID: 1467 | Organism (ID 12415): Arabidopsis thaliana Organ/tissue: leaf, flower, silique, stem Full structure (ID 35174): | ||
| Synthesized dimer: DGlcp(1-?)Subst // Subst = pinocembrin = SMILES O=C1CC(OC2=C1{5}C(O)=C{7}C(O)=C2)C3=CC=CC=C3 Donor (ID 34839): ?DGlcp(1-P-P-5)xXnucU Acceptor (ID 35173): Subst // Subst = pinocembrin = SMILES O=C1CC(OC2=C1{5}C(O)=C{7}C(O)=C2)C3=CC=CC=C3 Status: evidence in vitro
Confirmation methods: in vitro (purified protein) ID: 1468 | Organism (ID 12415): Arabidopsis thaliana Organ/tissue: leaf, flower, silique, stem Full structure (ID 35175): | ||
| Synthesized dimer: LRhap(1-?)Subst // Subst = hesperetin = SMILES O=C(C1=C(O/2)C={7}C(O)C={5}C1O)CC2=C3C={54}C(C(OC)=CC/3)O Donor (ID 35148): ?LRhap(1-P-P-5)xXnucU Acceptor (ID 34976): Subst // Subst = hesperetin = SMILES O=C(C1=C(O/2)C={7}C(O)C={5}C1O)CC2=C3C={54}C(C(OC)=CC/3)O Status: evidence in vitro
Confirmation methods: in vitro (purified protein) ID: 1469 | Organism (ID 12415): Arabidopsis thaliana Organ/tissue: leaf, flower, silique, stem Full structure (ID 35176): | ||
| Synthesized dimer: LRhap(1-?)Subst // Subst = naringenin = SMILES O=C1CC(C2=CC={54}C(O)C=C2)OC3=C{7}C(O)={6}C{5}C(O)=C13 Donor (ID 35148): ?LRhap(1-P-P-5)xXnucU Acceptor (ID 34954): Subst // Subst = naringenin = SMILES O=C1CC(C2=CC={54}C(O)C=C2)OC3=C{7}C(O)={6}C{5}C(O)=C13 Status: evidence in vitro
Confirmation methods: in vitro (purified protein) ID: 1470 | Organism (ID 12415): Arabidopsis thaliana Organ/tissue: leaf, flower, silique, stem Full structure (ID 35177): | ||
| Synthesized dimer: LRhap(1-?)Subst // Subst = formononetin = SMILES O=C1C(C2=CC=C(OC)C=C2)=COC3=C1C=C{7}C(O)=C3 Donor (ID 35148): ?LRhap(1-P-P-5)xXnucU Acceptor (ID 35178): Subst // Subst = formononetin = SMILES O=C1C(C2=CC=C(OC)C=C2)=COC3=C1C=C{7}C(O)=C3 Status: evidence in vitro
Confirmation methods: in vitro (purified protein) ID: 1471 | Organism (ID 12415): Arabidopsis thaliana Organ/tissue: leaf, flower, silique, stem Full structure (ID 35179): | ||
| Synthesized dimer: LRhap(1-?)Subst // Subst = genistein = SMILES O=C1C(C2=CC={54}C(O)C=C2)=COC3=C1{5}C(O)={6}C{7}C(O)={8}C3 Donor (ID 35148): ?LRhap(1-P-P-5)xXnucU Acceptor (ID 34978): Subst // Subst = genistein = SMILES O=C1C(C2=CC={54}C(O)C=C2)=COC3=C1{5}C(O)={6}C{7}C(O)={8}C3 Status: evidence in vitro
Confirmation methods: in vitro (purified protein) ID: 1472 | Organism (ID 12415): Arabidopsis thaliana Organ/tissue: leaf, flower, silique, stem Full structure (ID 35180): | ||
| Synthesized dimer: DGlcp(1-?)Subst // Subst = genistein = SMILES O=C1C(C2=CC={54}C(O)C=C2)=COC3=C1{5}C(O)={6}C{7}C(O)={8}C3 Donor (ID 34839): ?DGlcp(1-P-P-5)xXnucU Acceptor (ID 34978): Subst // Subst = genistein = SMILES O=C1C(C2=CC={54}C(O)C=C2)=COC3=C1{5}C(O)={6}C{7}C(O)={8}C3 Status: evidence in vitro
Confirmation methods: in vitro (purified protein) ID: 1473 | Organism (ID 12415): Arabidopsis thaliana Organ/tissue: leaf, flower, silique, stem Full structure (ID 35023): | ||
| Synthesized dimer: LRhap(1-?)Subst // Subst = isoliquiritigenin = SMILES O=C(C(C=C{54}C(O)=C1)={52}C1O)/C=C/C2=CC={4}C(O)C=C2 Donor (ID 35148): ?LRhap(1-P-P-5)xXnucU Acceptor (ID 34980): Subst // Subst = isoliquiritigenin = SMILES O=C(C(C=C{54}C(O)=C1)={52}C1O)/C=C/C2=CC={4}C(O)C=C2 Status: evidence in vitro
Confirmation methods: in vitro (purified protein) ID: 1474 | Organism (ID 12415): Arabidopsis thaliana Organ/tissue: leaf, flower, silique, stem Full structure (ID 35181): | ||
| Synthesized dimer: LRhap(1-?)Quercetin Donor (ID 35148): ?LRhap(1-P-P-5)xXnucU Acceptor (ID 35182): ?LRhap(1-7)xXQuercetin Status: evidence in vitro
Confirmation methods: in vitro (purified protein) ID: 1475 Notes: Substrate common name: vincetoxicoside B | Organism (ID 12415): Arabidopsis thaliana Organ/tissue: leaf, flower, silique, stem Full structure (ID 35183): | ||
| Synthesized dimer: DGlcp(1-?)Quercetin Donor (ID 34839): ?DGlcp(1-P-P-5)xXnucU Acceptor (ID 35182): ?LRhap(1-7)xXQuercetin Status: evidence in vitro
Confirmation methods: in vitro (purified protein) ID: 1476 Notes: Substrate common name: vincetoxicoside B | Organism (ID 12415): Arabidopsis thaliana Organ/tissue: leaf, flower, silique, stem Full structure (ID 35184): | ||
| Synthesized dimer: LRhap(1-?)Apigenin Donor (ID 35148): ?LRhap(1-P-P-5)xXnucU Acceptor (ID 35185): bD1dGlcp(1C-6)xXApigenin Status: evidence in vitro
Confirmation methods: in vitro (purified protein) ID: 1477 Notes: Substrate common name: isovitexin | Organism (ID 12415): Arabidopsis thaliana Organ/tissue: leaf, flower, silique, stem Full structure (ID 35186): | ||
| Synthesized dimer: LRhap(1-?)Subst // Subst = quercitin Donor (ID 35148): ?LRhap(1-P-P-5)xXnucU Acceptor (ID 35187): ?DGalp(1-3)Subst // Subst = quercitin Status: evidence in vitro
Confirmation methods: in vitro (purified protein) ID: 1478 Notes: Substrate common name: hyperin | Organism (ID 12415): Arabidopsis thaliana Organ/tissue: leaf, flower, silique, stem Full structure (ID 35188): | ||
| Synthesized dimer: LRhap(1-?)Apigenin Donor (ID 35148): ?LRhap(1-P-P-5)xXnucU Acceptor (ID 35189): bD1dGlcp(1C-6)[Me(1-7)]xXApigenin Status: evidence in vitro
Confirmation methods: in vitro (purified protein) ID: 1479 Notes: Substrate common name: swertisin | Organism (ID 12415): Arabidopsis thaliana Organ/tissue: leaf, flower, silique, stem Full structure (ID 35190): | ||
| Synthesized dimer: aLRhap(1-3)Subst // Subst = quercitin Donor (ID 35148): ?LRhap(1-P-P-5)xXnucU Acceptor (ID 34968): aLRhap(1-3)Subst // Subst = quercitin Status: evidence in vitro
Confirmation methods: in vitro (purified protein) ID: 1480 Notes: Substrate common name: quercitrin | Organism (ID 12415): Arabidopsis thaliana Organ/tissue: leaf, flower, silique, stem Full structure (ID 35191): | ||
| Synthesized dimer: DGlcp(1-?)Subst // Subst = quercitin Donor (ID 34839): ?DGlcp(1-P-P-5)xXnucU Acceptor (ID 34968): aLRhap(1-3)Subst // Subst = quercitin Status: evidence in vitro
Confirmation methods: in vitro (purified protein) ID: 1481 Notes: Substrate common name: quercitrin | Organism (ID 12415): Arabidopsis thaliana Organ/tissue: leaf, flower, silique, stem Full structure (ID 35192): | ||
| Synthesized dimer: DGlcp(1-?)Subst // Subst = scutellarein = SMILES O=C(C1=C(C={7}C(O){6}C(O)={5}C1O)O2)C=C2C3=CC={54}C(O)C=C3 Donor (ID 34839): ?DGlcp(1-P-P-5)xXnucU Acceptor (ID 35193): bDGlcpA(1-7)Subst // Subst = scutellarein = SMILES O=C(C1=C(C={7}C(O){6}C(O)={5}C1O)O2)C=C2C3=CC={54}C(O)C=C3 Status: evidence in vitro
Confirmation methods: in vitro (purified protein) ID: 1482 Notes: Substrate common name: scutellarin | Organism (ID 12415): Arabidopsis thaliana Organ/tissue: leaf, flower, silique, stem Full structure (ID 35194): | ||
| Synthesized dimer: LRhap(1-?)Apigenin Donor (ID 35148): ?LRhap(1-P-P-5)xXnucU Acceptor (ID 35195): aLRhap(1-2)bDGlcp(1-7)xXApigenin Status: evidence in vitro
Confirmation methods: in vitro (purified protein) ID: 1483 Notes: Substrate common name: rhoifolin | Organism (ID 12415): Arabidopsis thaliana Organ/tissue: leaf, flower, silique, stem Full structure (ID 35196): | ||
| Synthesized dimer: LRhap(1-?)Subst // Subst = methylophiopogonone A Donor (ID 35148): ?LRhap(1-P-P-5)xXnucU Acceptor (ID 35197): Subst // Subst = methylophiopogonone A Status: evidence in vitro
Confirmation methods: in vitro (purified protein) ID: 1484 | Organism (ID 12415): Arabidopsis thaliana Organ/tissue: leaf, flower, silique, stem Full structure (ID 35198): | ||
| Synthesized dimer: LRhap(1-?)Subst // Subst = sophoricoside Donor (ID 35148): ?LRhap(1-P-P-5)xXnucU Acceptor (ID 35199): Subst // Subst = sophoricoside Status: evidence in vitro
Confirmation methods: in vitro (purified protein) ID: 1485 | Organism (ID 12415): Arabidopsis thaliana Organ/tissue: leaf, flower, silique, stem Full structure (ID 35200): | ||
| Synthesized dimer: LRhap(1-?)Subst // Subst = 7-hydroxy-2-(2-phenylethyl)chromen-4-one Donor (ID 35148): ?LRhap(1-P-P-5)xXnucU Acceptor (ID 35201): Subst // Subst = 7-hydroxy-2-(2-phenylethyl)chromen-4-one Status: evidence in vitro
Confirmation methods: in vitro (purified protein) ID: 1486 | Organism (ID 12415): Arabidopsis thaliana Organ/tissue: leaf, flower, silique, stem Full structure (ID 35202): | ||
| Synthesized dimer: LRhap(1-?)Subst // Subst = 8-chloranyl-6-hydroxy-2-(2-phenylethyl)chromen-4-one Donor (ID 35148): ?LRhap(1-P-P-5)xXnucU Acceptor (ID 35203): Subst // Subst = 8-chloranyl-6-hydroxy-2-(2-phenylethyl)chromen-4-one Status: evidence in vitro
Confirmation methods: in vitro (purified protein) ID: 1487 | Organism (ID 12415): Arabidopsis thaliana Organ/tissue: leaf, flower, silique, stem Full structure (ID 35204): | ||
| Synthesized dimer: LRhap(1-?)Subst // Subst = 4,4'-dihydroxybenzophenone Donor (ID 35148): ?LRhap(1-P-P-5)xXnucU Acceptor (ID 35205): Subst // Subst = 4,4'-dihydroxybenzophenone Status: evidence in vitro
Confirmation methods: in vitro (purified protein) ID: 1488 | Organism (ID 12415): Arabidopsis thaliana Organ/tissue: leaf, flower, silique, stem Full structure (ID 35206): | ||
| Synthesized dimer: LRhap(1-?)Subst // Subst = 2,4-dihydroxybenzophenone = SMILES O=C(C1={2}C(O)C={4}C(O)C=C1)C2=CC=CC=C2 Donor (ID 35148): ?LRhap(1-P-P-5)xXnucU Acceptor (ID 35207): Subst // Subst = 2,4-dihydroxybenzophenone = SMILES O=C(C1={2}C(O)C={4}C(O)C=C1)C2=CC=CC=C2 Status: evidence in vitro
Confirmation methods: in vitro (purified protein) ID: 1489 | Organism (ID 12415): Arabidopsis thaliana Organ/tissue: leaf, flower, silique, stem Full structure (ID 35208): | ||
| Synthesized dimer: LRhap(1-?)Subst // Subst = 7-hydroxycoumarin = SMILES C1=C{7}C(=CC2=C1C=CC(=O)O2)O Donor (ID 35148): ?LRhap(1-P-P-5)xXnucU Acceptor (ID 35209): Subst // Subst = 7-hydroxycoumarin = SMILES C1=C{7}C(=CC2=C1C=CC(=O)O2)O Status: evidence in vitro
Confirmation methods: in vitro (purified protein) ID: 1490 | Organism (ID 12415): Arabidopsis thaliana Organ/tissue: leaf, flower, silique, stem Full structure (ID 35210): | ||
| Synthesized dimer: LRhap(1-?)Subst // Subst = 7-hydroxy-4-methylcoumarin Donor (ID 35148): ?LRhap(1-P-P-5)xXnucU Acceptor (ID 35211): Subst // Subst = 7-hydroxy-4-methylcoumarin Status: evidence in vitro
Confirmation methods: in vitro (purified protein) ID: 1491 | Organism (ID 12415): Arabidopsis thaliana Organ/tissue: leaf, flower, silique, stem Full structure (ID 35212): | ||
| Synthesized dimer: LRhap(1-?)Subst // Subst = magnolol = SMILES C=CCC1=CC={52}C(C(C2={2}C(O)C=CC(CC=C)=C2)=C1)O Donor (ID 35148): ?LRhap(1-P-P-5)xXnucU Acceptor (ID 35213): Subst // Subst = magnolol = SMILES C=CCC1=CC={52}C(C(C2={2}C(O)C=CC(CC=C)=C2)=C1)O Status: evidence in vitro
Confirmation methods: in vitro (purified protein) ID: 1492 | Organism (ID 12415): Arabidopsis thaliana Organ/tissue: leaf, flower, silique, stem Full structure (ID 35214): | ||
| Synthesized dimer: LRhap(1-?)Subst // Subst = emodin = SMILES O{1}C(C=C(C=C1C(C2=C3{8}C(O)=C{6}C(O)=C2)=O)C)=C1C3=O Donor (ID 35148): ?LRhap(1-P-P-5)xXnucU Acceptor (ID 35215): Subst // Subst = emodin = SMILES O{1}C(C=C(C=C1C(C2=C3{8}C(O)=C{6}C(O)=C2)=O)C)=C1C3=O Status: evidence in vitro
Confirmation methods: in vitro (purified protein) ID: 1493 | Organism (ID 12415): Arabidopsis thaliana Organ/tissue: leaf, flower, silique, stem Full structure (ID 35216): | ||
| Synthesized dimer: aLRhap(1-3)Subst // Subst = taxifolin Donor (ID 35217): ?LRhap(1-P-P-5)xXnucT Acceptor (ID 34974): Subst // Subst = taxifolin Status: evidence in vitro
Confirmation methods: expression in E.coli (as whole-cell biocatalyst) ID: 1494 Notes: Product common name: astilbin | Organism (ID 12415): Arabidopsis thaliana Expressed in: E. coli; leaf, flower, silique, stem Full structure (ID 35218): | Mo et al. 2016 DOI: 10.1039/c6ra16251g Thuan et al. 2017 DOI: 10.1007/s11274-017-2208-7 | |
| Enzyme name: 78D2 UniProt ID: Q9LFJ8.1 CAZy family: GT1 Gene name: UGT78D2 / AT5G17050 Gene GenBank ID: 831568 | Synthesized dimer: DGlcp(1-4)Prcat Donor (ID 34839): ?DGlcp(1-P-P-5)xXnucU Acceptor (ID 34840): xXPrcat // Prcat = 3,4-dihydroxybenzoic (protocatechuic) acid Status: evidence in vitro
Confirmation methods: in vitro (purified protein) ID: 1495 | Organism (ID 12415): Arabidopsis thaliana Organ/tissue: leaf, stem, flower bud, flower, root, seedling Full structure (ID 34841): | Lim et al. 2002 DOI: 10.1074/jbc.M109287200 Kubo et al. 2007 DOI: 10.1007/s10265-006-0067-7 Lee et al. 2005 DOI: 10.1007/BF03030577 |
| Synthesized dimer: DGlcp(1-4)4HOBz Donor (ID 34839): ?DGlcp(1-P-P-5)xXnucU Acceptor (ID 35219): xX4HOBz Status: evidence in vitro
Confirmation methods: in vitro (purified protein) ID: 1496 | Organism (ID 12415): Arabidopsis thaliana Organ/tissue: leaf, stem, flower bud, flower, root, seedling Full structure (ID 35220): | ||
| Synthesized dimer: bDGlcp(1-3)Quercetin Donor (ID 34839): ?DGlcp(1-P-P-5)xXnucU Acceptor (ID 34846): xXQuercetin Status: direct evidence in vivo
Confirmation methods: in vitro (purified protein), expression in E.coli (as whole-cell biocatalyst), mutation ID: 1497 Notes: Product common name: isoquercitrin. 78D2 is required for synthesis of quercetin 3-O-beta-D-glucopyranoside-7-O-alpha-L-rhamnopyranoside and quercetin 3-O-[6''-O-(rhamnopyranosyl) D-glucopyranoside] 7-O-rhamnopyranoside in planta. | Organism (ID 12415): Arabidopsis thaliana Expressed in: E. coli; leaf, stem, flower bud, flower, root, seedling Full structure (ID 19231): CSDB ID(s): 44612, 46693, 47475, 48669, 48941, 60081, 60203, 60273, 60908, 61152, 61413, 61821, 62231, 63006, 63205, 63329, 63829, 64121, 64673, 64772, 64781, 64887, 64953, 65376, 65396, 65565, 65724, 65828, 65928, 65944, 65954, 65977, 65989, 66185, 66208, 66350, 66379, 66413, 66519, 66554, 66580, 66938, 66944, 67032, 67190, 67294, 67570, 67580, 67607, 67635, 67646, 67720, 67766, 67864, 67926, 67995, 68004, 68170, 68616, 68651, 68741, 68865, 120586, 131302, 139116, 146361, 146591, 146662, 146676, 146799, 270704, 270775 | Lim et al. 2004 DOI: 10.1002/bit.20154 Tohge et al. 2005 DOI: 10.1111/j.1365-313X.2005.02371.x Kim et al. 2013a DOI: 10.1007/s00253-013-4844-7 Kubo et al. 2007 DOI: 10.1007/s10265-006-0067-7 Lee et al. 2005 DOI: 10.1007/BF03030577 Kim et al. 2012b DOI: 10.1007/s00253-011-3747-8 Yin et al. 2014 DOI: 10.1111/nph.12558 An et al. 2016 DOI: 10.1007/s10295-016-1750-x Kim et al. 2013b DOI: 10.1007/s00425-013-1922-0 Pei et al. 2019 DOI: 10.1007/s10600-019-02712-9 | |
| Synthesized dimer: DGlcp(1-3)Cyanidin Donor (ID 34839): ?DGlcp(1-P-P-5)xXnucU Acceptor (ID 35221): xXCyanidin Status: evidence in vitro
Confirmation methods: in vitro (purified protein) ID: 1498 | Organism (ID 12415): Arabidopsis thaliana Organ/tissue: leaf, stem, flower bud, flower, root, seedling Full structure (ID 35222): | Miyahara et al. 2013 DOI: 10.1016/j.jplph.2012.12.001 Tohge et al. 2005 DOI: 10.1111/j.1365-313X.2005.02371.x Kubo et al. 2007 DOI: 10.1007/s10265-006-0067-7 Lee et al. 2005 DOI: 10.1007/BF03030577 | |
| Synthesized dimer: DGlcp(1-3)Subst // Subst = pelargonidin = SMILES O{3}C1=C(C2=CC={54}C(O)C=C2)[O+]=C3C={7}C(O)C={5}C(O)C3=C1 Donor (ID 34839): ?DGlcp(1-P-P-5)xXnucU Acceptor (ID 35223): Subst // Subst = pelargonidin = SMILES O{3}C1=C(C2=CC={54}C(O)C=C2)[O+]=C3C={7}C(O)C={5}C(O)C3=C1 Status: evidence in vitro
Confirmation methods: in vitro (purified protein) ID: 1499 | Organism (ID 12415): Arabidopsis thaliana Organ/tissue: leaf, stem, flower bud, flower, root, seedling Full structure (ID 21983): CSDB ID(s): 50479 | Tohge et al. 2005 DOI: 10.1111/j.1365-313X.2005.02371.x Kubo et al. 2007 DOI: 10.1007/s10265-006-0067-7 Lee et al. 2005 DOI: 10.1007/BF03030577 | |
| Synthesized dimer: DGlcp(1-3)Subst // Subst = delphinidin = SMILES O{3}C1=C(C2=C{53}C(O)={54}C(O){55}C(O)=C2)[O+]=C3C={7}C(O)C={5}C(O)C3=C1 Donor (ID 34839): ?DGlcp(1-P-P-5)xXnucU Acceptor (ID 35224): Subst // Subst = delphinidin = SMILES O{3}C1=C(C2=C{53}C(O)={54}C(O){55}C(O)=C2)[O+]=C3C={7}C(O)C={5}C(O)C3=C1 Status: evidence in vitro
Confirmation methods: in vitro (purified protein) ID: 1500 | Organism (ID 12415): Arabidopsis thaliana Organ/tissue: leaf, stem, flower bud, flower, root, seedling Full structure (ID 21988): CSDB ID(s): 51094 | ||
| Synthesized dimer: bDGlcp(1-3)Kaempferol Donor (ID 34839): ?DGlcp(1-P-P-5)xXnucU Acceptor (ID 34951): xXKaempferol Status: direct evidence in vivo
Confirmation methods: in vitro (purified protein), mutation ID: 1501 Notes: 78D2 is required for synthesis of kaempferol 3-O-beta-D-glucopyranoside-7-O-alpha-L-rhamnopyranoside and kaempferol 3-O-[6''-O-(rhamnopyranosyl) D-glucopyranoside] 7-O-rhamnopyranoside in planta. | Organism (ID 12415): Arabidopsis thaliana Organ/tissue: leaf, stem, flower bud, flower, root, seedling Full structure (ID 20137): CSDB ID(s): 46694, 47474, 60897, 60910, 61848, 62230, 62517, 63013, 63185, 63327, 63828, 63861, 63963, 64672, 64912, 65380, 65446, 65975, 66411, 66427, 66432, 66441, 66501, 66518, 66593, 66755, 66906, 67296, 67311, 67467, 67579, 67606, 67645, 67697, 67925, 67998, 68005, 68832, 68997, 120166, 120585, 139117, 146367, 146663, 147282, 245850, 270774 | Tohge et al. 2005 DOI: 10.1111/j.1365-313X.2005.02371.x Kubo et al. 2007 DOI: 10.1007/s10265-006-0067-7 Lee et al. 2005 DOI: 10.1007/BF03030577 Yin et al. 2014 DOI: 10.1111/nph.12558 | |
| Synthesized dimer: DGlcp(1-3)Myricetin Donor (ID 34839): ?DGlcp(1-P-P-5)xXnucU Acceptor (ID 35165): xXMyricetin Status: evidence in vitro
Confirmation methods: in vitro (purified protein) ID: 1502 | Organism (ID 12415): Arabidopsis thaliana Organ/tissue: leaf, stem, flower bud, flower, root, seedling Full structure (ID 35225): | Tohge et al. 2005 DOI: 10.1111/j.1365-313X.2005.02371.x Kubo et al. 2007 DOI: 10.1007/s10265-006-0067-7 Lee et al. 2005 DOI: 10.1007/BF03030577 | |
| Synthesized dimer: DGlcpN(1-3)Quercetin Donor (ID 35226): Ac(1-2)?DGlcpN(1-P-P-5)xXnucU Acceptor (ID 34846): xXQuercetin Status: evidence in vitro
Confirmation methods: expression in E.coli (as whole-cell biocatalyst) ID: 1503 | Organism (ID 12415): Arabidopsis thaliana Expressed in: E. coli; leaf, stem, flower bud, flower, root, seedling Full structure (ID 35227): | Kubo et al. 2007 DOI: 10.1007/s10265-006-0067-7 Lee et al. 2005 DOI: 10.1007/BF03030577 Kim et al. 2012b DOI: 10.1007/s00253-011-3747-8 | |
| Synthesized dimer: DGlcp(1-1)Subst // Subst = 2,4,5-trichlorophenol Donor (ID 34839): ?DGlcp(1-P-P-5)xXnucU Acceptor (ID 34851): Subst // Subst = 2,4,5-trichlorophenol Status: evidence in vitro
Confirmation methods: in vitro (crude extract) ID: 1504 | Organism (ID 12415): Arabidopsis thaliana Full structure (ID 34852): | Brazier-Hicks et al. 2007 DOI: 10.1073/pnas.0706421104 | |
| Enzyme name: 78D3 UniProt ID: Q9LFK0.1 CAZy family: GT1 Gene name: UGT78D3 / AT5G17030 Gene GenBank ID: 831566 | Synthesized dimer: DGlcp(1-3)Quercetin Donor (ID 34839): ?DGlcp(1-P-P-5)xXnucU Acceptor (ID 34846): xXQuercetin Status: evidence in vitro
Confirmation methods: in vitro (purified protein) ID: 1505 | Organism (ID 12415): Arabidopsis thaliana Organ/tissue: leaf, stem, root, flower bud, flower Full structure (ID 34960): | Lim et al. 2004 DOI: 10.1002/bit.20154 Yonekura-Sakakibara et al. 2008 DOI: 10.1105/tpc.108.058040 |
| Synthesized dimer: aLArap(1-3)Quercetin Donor (ID 35228): bLArap(1-P-P-5)xXnucU Acceptor (ID 34846): xXQuercetin Status: direct evidence in vivo
Confirmation methods: in vitro (purified protein), mutation ID: 1506 Notes: 78D3 is required for synthesis of quercetin 3-O-alpha-L-arabinopyranoside-7-O-alpha-L-rhamnopyranoside in planta. | Organism (ID 12415): Arabidopsis thaliana Organ/tissue: leaf, stem, root, flower bud, flower Full structure (ID 22030): CSDB ID(s): 50541, 60913, 61731, 62054, 63829, 64777, 64786, 64888, 65492, 65826, 66186, 145854, 146589, 146808 | Kim et al. 2013b DOI: 10.1007/s00425-013-1922-0 Yonekura-Sakakibara et al. 2008 DOI: 10.1105/tpc.108.058040 | |
| Synthesized dimer: LArap4N(1-3)Quercetin Donor (ID 35229): Fo(1-4)bLArap4N(1-P-P-5)xXnucU Acceptor (ID 34846): xXQuercetin Status: evidence in vitro
Confirmation methods: expression in E.coli (as whole-cell biocatalyst) ID: 1507 Notes: The substrate does not occur in nature. | Organism (ID 12415): Arabidopsis thaliana Expressed in: E. coli Full structure (ID 35230): | Kim et al. 2010 DOI: 10.1002/cbic.201000456 | |
| Synthesized dimer: aLArap(1-3)Kaempferol Donor (ID 35228): bLArap(1-P-P-5)xXnucU Acceptor (ID 34951): xXKaempferol Status: evidence in vitro
Confirmation methods: in vitro (purified protein) ID: 1508 | Organism (ID 12415): Arabidopsis thaliana Organ/tissue: leaf, stem, root, flower bud, flower Full structure (ID 26578): CSDB ID(s): 61856, 63828, 65047, 146586 | Yonekura-Sakakibara et al. 2008 DOI: 10.1105/tpc.108.058040 | |
| Synthesized dimer: aLArap(1-3)Kaempferol Donor (ID 35228): bLArap(1-P-P-5)xXnucU Acceptor (ID 35231): aLRhap(1-7)xXKaempferol Status: direct evidence in vivo
Confirmation methods: in vitro (purified protein), mutation ID: 1509 | Organism (ID 12415): Arabidopsis thaliana Organ/tissue: leaf, stem, root, flower bud, flower Full structure (ID 27640): CSDB ID(s): 60911 | ||
| Synthesized dimer: LArap(1-3)Myricetin Donor (ID 35228): bLArap(1-P-P-5)xXnucU Acceptor (ID 35165): xXMyricetin Status: evidence in vitro
Confirmation methods: in vitro (purified protein) ID: 1510 | Organism (ID 12415): Arabidopsis thaliana Organ/tissue: leaf, stem, root, flower bud, flower Full structure (ID 35232): | ||
| Synthesized dimer: LArap(1-3)Subst // Subst = isorhamnetin = SMILES O{3}C1=C(C2=CC={54}C(O)C(OC)=C2)OC3=C({5}C(O)=C{7}C(O)=C3)C1=O Donor (ID 35228): bLArap(1-P-P-5)xXnucU Acceptor (ID 34965): Subst // Subst = isorhamnetin = SMILES O{3}C1=C(C2=CC={54}C(O)C(OC)=C2)OC3=C({5}C(O)=C{7}C(O)=C3)C1=O Status: evidence in vitro
Confirmation methods: in vitro (purified protein) ID: 1511 | Organism (ID 12415): Arabidopsis thaliana Organ/tissue: leaf, stem, root, flower bud, flower Full structure (ID 35233): | ||
| Enzyme name: 79B1 UniProt ID: Q9LVW3.1 CAZy family: GT1 Gene name: UGT79B1 / AT5G54060 Gene GenBank ID: 835489 | Synthesized dimer: bDXylp(1-2)bDGlcp Donor (ID 35234): bDXylp(1-P-P-5)xXnucU Acceptor (ID 35235): bDGlcp(1-3)xXCyanidin Status: direct evidence in vivo
Confirmation methods: in vitro (purified protein), mutation ID: 1512 Notes: 79B1 is required for synthesis of xXSin?(9-2)bDXylp(1-2)[bDGlcp(1-4)xXpCoum(9-6)]bDGlcp(1-3)[xXMal(1-6)bDGlcp(1-5)]xXCyanidin (A11), xXSin?(9-2)bDXylp(1-2)[bDGlcp(1-4)xXpCoum(9-6)]bDGlcp(1-3)[bDGlcp(1-5)]xXCyanidin (A10), xXSin?(9-2)bDXylp(1-2)[xXpCoum(9-6)]bDGlcp(1-3)[xXMal(1-6)bDGlcp(1-5)]xXCyanidin (A9), bDXylp(1-2)[bDGlcp(1-4)xXpCoum(9-6)]bDGlcp(1-3)[xXMal(1-6)bDGlcp(1-5)]xXCyanidin (A8), bDXylp(1-2)[xXpCoum(9-6)]bDGlcp(1-3)[xXMal(1-6)bDGlcp(1-5)]xXCyanidin (A5) in planta. | Organism (ID 12415): Arabidopsis thaliana Full structure (ID 31813): CSDB ID(s): 67012, 68253, 68845 | Miyahara et al. 2013 DOI: 10.1016/j.jplph.2012.12.001 Yonekura-Sakakibara et al. 2012 DOI: 10.1111/j.1365-313X.2011.04779.x |
| Synthesized dimer: Xylp(1-2)DGlcp Donor (ID 35236): ??Xylp(1-P-P-5)xXnucU Acceptor (ID 35237): ??Rhap(1-6)?DGlcp(1-3)xXCyanidin Status: evidence in vitro
Confirmation methods: in vitro (purified protein) ID: 1513 | Organism (ID 12415): Arabidopsis thaliana Full structure (ID 35238): | Yonekura-Sakakibara et al. 2012 DOI: 10.1111/j.1365-313X.2011.04779.x | |
| Synthesized dimer: Xylp(1-2)DGlcp Donor (ID 35236): ??Xylp(1-P-P-5)xXnucU Acceptor (ID 35239): ?DGlcp(1-3)Subst // Subst = delphinidin = SMILES O{3}C1=C(C2=C{53}C(O)={54}C(O){55}C(O)=C2)[O+]=C3C={7}C(O)C={5}C(O)C3=C1 Status: evidence in vitro
Confirmation methods: in vitro (purified protein) ID: 1514 | Organism (ID 12415): Arabidopsis thaliana Full structure (ID 35240): | ||
| Synthesized dimer: Xylp(1-2)DGlcp Donor (ID 35236): ??Xylp(1-P-P-5)xXnucU Acceptor (ID 35241): ?DGlcp(1-3)Subst // Subst = pelargonidin = SMILES O{3}C1=C(C2=CC={54}C(O)C=C2)[O+]=C3C={7}C(O)C={5}C(O)C3=C1 Status: evidence in vitro
Confirmation methods: in vitro (purified protein) ID: 1515 | Organism (ID 12415): Arabidopsis thaliana Full structure (ID 35242): | ||
| Synthesized dimer: Xylp(1-2)DGlcp Donor (ID 35236): ??Xylp(1-P-P-5)xXnucU Acceptor (ID 35016): ?DGlcp(1-3)xXKaempferol Status: evidence in vitro
Confirmation methods: in vitro (purified protein) ID: 1516 | Organism (ID 12415): Arabidopsis thaliana Full structure (ID 35243): | ||
| Synthesized dimer: Xylp(1-2)DGlcp Donor (ID 35236): ??Xylp(1-P-P-5)xXnucU Acceptor (ID 35244): ??Rhap(1-6)?DGlcp(1-3)xXKaempferol Status: evidence in vitro
Confirmation methods: in vitro (purified protein) ID: 1517 | Organism (ID 12415): Arabidopsis thaliana Full structure (ID 35245): | ||
| Synthesized dimer: Xylp(1-2)DGlcp Donor (ID 35236): ??Xylp(1-P-P-5)xXnucU Acceptor (ID 35145): ?DGlcp(1-3)xXQuercetin Status: evidence in vitro
Confirmation methods: in vitro (purified protein), expression in E.coli (as whole-cell biocatalyst) ID: 1518 | Organism (ID 12415): Arabidopsis thaliana Expressed in: E. coli Full structure (ID 35246): | An et al. 2016 DOI: 10.1007/s10295-016-1750-x Yonekura-Sakakibara et al. 2012 DOI: 10.1111/j.1365-313X.2011.04779.x | |
| Enzyme name: 79B2 UniProt ID: Q9T080 CAZy family: GT1 Gene name: UGT79B2/At4g27560 Gene GenBank ID: 828865 | Synthesized dimer: Rhap(1-?)Cyanidin Donor (ID 35131): ??Rhap(1-P-P-5)xXnucU Acceptor (ID 35221): xXCyanidin Status: direct evidence in vivo
Confirmation methods: in vitro (purified protein), overexpression, double mutation (ugt79b2/b3) ID: 1519 | Organism (ID 12415): Arabidopsis thaliana Full structure (ID 35247): | Li et al. 2017 DOI: 10.1111/tpj.13324 |
| Synthesized dimer: Rhap(1-?)Cyanidin Donor (ID 35131): ??Rhap(1-P-P-5)xXnucU Acceptor (ID 35248): ?DGlcp(1-3)xXCyanidin Status: direct evidence in vivo
Confirmation methods: in vitro (purified protein), overexpression, double mutation (ugt79b2/b3) ID: 1520 | Organism (ID 12415): Arabidopsis thaliana Full structure (ID 35249): | ||
| Synthesized dimer: Rhap(1-?)Quercetin Donor (ID 35131): ??Rhap(1-P-P-5)xXnucU Acceptor (ID 34846): xXQuercetin Status: evidence in vitro
Confirmation methods: in vitro (purified protein) ID: 1521 | Organism (ID 12415): Arabidopsis thaliana Full structure (ID 35250): | ||
| Synthesized dimer: Rhap(1-?)Quercetin Donor (ID 35131): ??Rhap(1-P-P-5)xXnucU Acceptor (ID 34951): xXKaempferol Status: evidence in vitro
Confirmation methods: in vitro (purified protein) ID: 1522 | Organism (ID 12415): Arabidopsis thaliana Full structure (ID 35250): | ||
| Enzyme name: 79B3 UniProt ID: Q9T081 CAZy family: GT1 Gene name: UGT79B3/At4g27570 Gene GenBank ID: 828866 | Synthesized dimer: Rhap(1-?)Cyanidin Donor (ID 35131): ??Rhap(1-P-P-5)xXnucU Acceptor (ID 35221): xXCyanidin Status: direct evidence in vivo
Confirmation methods: in vitro (purified protein), overexpression, double mutation (ugt79b2/b3) ID: 1523 | Organism (ID 12415): Arabidopsis thaliana Full structure (ID 35247): | |
| Synthesized dimer: Rhap(1-?)Cyanidin Donor (ID 35131): ??Rhap(1-P-P-5)xXnucU Acceptor (ID 35248): ?DGlcp(1-3)xXCyanidin Status: direct evidence in vivo
Confirmation methods: in vitro (purified protein), overexpression, double mutation (ugt79b2/b3) ID: 1524 | Organism (ID 12415): Arabidopsis thaliana Full structure (ID 35249): | ||
| Synthesized dimer: Rhap(1-?)Quercetin Donor (ID 35131): ??Rhap(1-P-P-5)xXnucU Acceptor (ID 34846): xXQuercetin Status: evidence in vitro
Confirmation methods: in vitro (purified protein) ID: 1525 | Organism (ID 12415): Arabidopsis thaliana Full structure (ID 35250): | ||
| Synthesized dimer: Rhap(1-?)Quercetin Donor (ID 35131): ??Rhap(1-P-P-5)xXnucU Acceptor (ID 34951): xXKaempferol Status: evidence in vitro
Confirmation methods: in vitro (purified protein) ID: 1526 | Organism (ID 12415): Arabidopsis thaliana Full structure (ID 35250): | ||
| Enzyme name: 79B7 UniProt ID: Q9M0P3 CAZy family: GT1 Gene GenBank ID: AAO42032.1 | Synthesized dimer: bDGlcp(1-7)Apigenin Donor (ID 34839): ?DGlcp(1-P-P-5)xXnucU Acceptor (ID 34958): xXApigenin Status: evidence in vitro
Confirmation methods: expression in E.coli (as whole-cell biocatalyst) ID: 1527 | Organism (ID 12415): Arabidopsis thaliana Expressed in: E. coli Full structure (ID 21525): CSDB ID(s): 49661, 49687, 62497, 62553, 62903, 63751, 64986, 65809, 65916, 66060, 66560, 66606, 67297, 67356, 67575, 67602, 67653, 67686, 68164, 68279, 68829, 68912, 119387, 146102, 146675, 149840 | Thuan et al. 2013b DOI: 10.1016/j.procbio.2013.07.005 |
| Synthesized dimer: bDGlcp(1-7)Subst // Subst = baicalein = SMILES O=C1C=C(C2=CC=CC=C2)OC3=C1{5}C(O)={6}C(O){7}C(O)=C3 Donor (ID 34839): ?DGlcp(1-P-P-5)xXnucU Acceptor (ID 35168): Subst // Subst = baicalein = SMILES O=C1C=C(C2=CC=CC=C2)OC3=C1{5}C(O)={6}C(O){7}C(O)=C3 Status: evidence in vitro
Confirmation methods: expression in E.coli (as whole-cell biocatalyst) ID: 1528 | Organism (ID 12415): Arabidopsis thaliana Expressed in: E. coli Full structure (ID 26948): CSDB ID(s): 60033, 62422 | ||
| Synthesized dimer: bDGlcp(1-7)Luteolin Donor (ID 34839): ?DGlcp(1-P-P-5)xXnucU Acceptor (ID 34871): xXLuteolin Status: evidence in vitro
Confirmation methods: expression in E.coli (as whole-cell biocatalyst) ID: 1529 | Organism (ID 12415): Arabidopsis thaliana Expressed in: E. coli Full structure (ID 23165): CSDB ID(s): 62552, 62863, 62902, 62915, 63016, 63035, 63383, 63392, 64154, 64667, 64985, 65807, 65861, 65917, 66407, 66495, 66520, 66559, 66607, 66621, 67016, 67359, 67363, 67577, 67604, 67656, 67693, 67947, 68162, 68276, 68914, 119174, 119388, 131350, 140873, 147318, 219360, 269779 | ||
| Synthesized dimer: bDGlcp(1-7)Subst // Subst = chrysin = SMILES O=C1C=C(OC2=C1{5}C(O)=C{7}C(O)=C2)C3=CC=CC=C3 Donor (ID 34839): ?DGlcp(1-P-P-5)xXnucU Acceptor (ID 35028): Subst // Subst = chrysin = SMILES O=C1C=C(OC2=C1{5}C(O)=C{7}C(O)=C2)C3=CC=CC=C3 Status: evidence in vitro
Confirmation methods: expression in E.coli (as whole-cell biocatalyst) ID: 1530 Notes: Minor activity | Organism (ID 12415): Arabidopsis thaliana Expressed in: E. coli Full structure (ID 21549): CSDB ID(s): 49686 | ||
| Enzyme name: 80A2 UniProt ID: Q9M8Z7.1 CAZy family: GT1 Gene name: UGT80A2 / AT3G07020 Gene GenBank ID: 819887 | Synthesized dimer: DGlcp(1-3)Subst // Subst = beta-sitosterol Donor (ID 34839): ?DGlcp(1-P-P-5)xXnucU Acceptor (ID 35251): Subst // Subst = beta-sitosterol Status: direct evidence in vivo
Confirmation methods: in vitro (purified protein), mutation ID: 1531 | Organism (ID 12415): Arabidopsis thaliana Organ/tissue: root, leaf, stem, flower, silique Full structure (ID 35252): | Messner et al. 2003 DOI: 10.1007/s00425-002-0969-0 Chung et al. 2011 DOI: 10.1007/s12257-010-0445-9 DeBolt et al. 2009 DOI: 10.1104/pp.109.140582 Sharma et al. 2007 DOI: 10.1016/j.abb.2007.01.024 Stucky et al. 2015 DOI: 10.1093/jxb/eru410 |
| Synthesized dimer: DGlcp(1-3)Subst // Subst = stigmasterol = SMILES CC[C@H](/C=C/[C@@H](C)[C@H]1CC[C@@H]2[C@@]1(CC[C@H]3[C@H]2CC=C4[C@@]3(CC{3}[C@@H](C4)O)C)C)C(C)C Donor (ID 34839): ?DGlcp(1-P-P-5)xXnucU Acceptor (ID 35253): Subst // Subst = stigmasterol = SMILES CC[C@H](/C=C/[C@@H](C)[C@H]1CC[C@@H]2[C@@]1(CC[C@H]3[C@H]2CC=C4[C@@]3(CC{3}[C@@H](C4)O)C)C)C(C)C Status: direct evidence in vivo
Confirmation methods: in vitro (purified protein), mutation ID: 1532 | Organism (ID 12415): Arabidopsis thaliana Organ/tissue: root, leaf, stem, flower, silique Full structure (ID 27654): CSDB ID(s): 60933 | ||
| Synthesized dimer: DGlcp(1-3)Subst // Subst = dehydroepiandrosterone Donor (ID 34839): ?DGlcp(1-P-P-5)xXnucU Acceptor (ID 35254): Subst // Subst = dehydroepiandrosterone Status: evidence in vitro
Confirmation methods: in vitro (partially purified protein) ID: 1533 | Organism (ID 12415): Arabidopsis thaliana Organ/tissue: root, leaf, stem, flower, silique Full structure (ID 35255): | Messner et al. 2003 DOI: 10.1007/s00425-002-0969-0 DeBolt et al. 2009 DOI: 10.1104/pp.109.140582 Sharma et al. 2007 DOI: 10.1016/j.abb.2007.01.024 | |
| Synthesized dimer: DGlcp(1-3)Subst // Subst = deacetyl 16-dehydropregnenolone Donor (ID 34839): ?DGlcp(1-P-P-5)xXnucU Acceptor (ID 35256): Subst // Subst = deacetyl 16-dehydropregnenolone Status: evidence in vitro
Confirmation methods: in vitro (partially purified protein) ID: 1534 | Organism (ID 12415): Arabidopsis thaliana Organ/tissue: root, leaf, stem, flower, silique Full structure (ID 35257): | ||
| Synthesized dimer: DGlcp(1-3)Subst // Subst = transandrosterone Donor (ID 34839): ?DGlcp(1-P-P-5)xXnucU Acceptor (ID 35258): Subst // Subst = transandrosterone Status: evidence in vitro
Confirmation methods: in vitro (partially purified protein) ID: 1535 | Organism (ID 12415): Arabidopsis thaliana Organ/tissue: root, leaf, stem, flower, silique Full structure (ID 35259): | ||
| Synthesized dimer: DGlcp(1-3)Subst // Subst = 3-beta-hydroxy 16,17-alpha-epoxypregnenolene Donor (ID 34839): ?DGlcp(1-P-P-5)xXnucU Acceptor (ID 35260): Subst // Subst = 3-beta-hydroxy 16,17-alpha-epoxypregnenolene Status: evidence in vitro
Confirmation methods: in vitro (partially purified protein) ID: 1536 | Organism (ID 12415): Arabidopsis thaliana Organ/tissue: root, leaf, stem, flower, silique Full structure (ID 35261): | ||
| Synthesized dimer: DGlcp(1-3)Subst // Subst = pregnenolene Donor (ID 34839): ?DGlcp(1-P-P-5)xXnucU Acceptor (ID 35262): Subst // Subst = pregnenolene Status: evidence in vitro
Confirmation methods: in vitro (partially purified protein) ID: 1537 | Organism (ID 12415): Arabidopsis thaliana Organ/tissue: root, leaf, stem, flower, silique Full structure (ID 35263): | ||
| Synthesized dimer: DGlcp(1-3)Subst // Subst = solasodine = SMILES [H][C@]1(O[C@@]2(NC[C@H](C)CC2)[C@H]3C)C[C@@]4([H])[C@]5([H])CC=C6C{3}[C@@H](O)CC[C@]6(C)[C@@]5([H])CC[C@]4(C)[C@]13[H] Donor (ID 34839): ?DGlcp(1-P-P-5)xXnucU Acceptor (ID 35264): Subst // Subst = solasodine = SMILES [H][C@]1(O[C@@]2(NC[C@H](C)CC2)[C@H]3C)C[C@@]4([H])[C@]5([H])CC=C6C{3}[C@@H](O)CC[C@]6(C)[C@@]5([H])CC[C@]4(C)[C@]13[H] Status: evidence in vitro
Confirmation methods: in vitro (partially purified protein) ID: 1538 | Organism (ID 12415): Arabidopsis thaliana Organ/tissue: root, leaf, stem, flower, silique Full structure (ID 35265): | ||
| Synthesized dimer: DGlcp(1-3)Subst // Subst = 5-alpha-cholestan-3-beta-ol Donor (ID 34839): ?DGlcp(1-P-P-5)xXnucU Acceptor (ID 35266): Subst // Subst = 5-alpha-cholestan-3-beta-ol Status: evidence in vitro
Confirmation methods: in vitro (partially purified protein) ID: 1539 | Organism (ID 12415): Arabidopsis thaliana Organ/tissue: root, leaf, stem, flower, silique Full structure (ID 35267): | ||
| Synthesized dimer: DGlcp(1-3)Subst // Subst = cholesterol = SMILES C[C@H](CCCC(C)C)[C@H]1CC[C@@H]2[C@@]1(CC[C@H]3[C@H]2CC=C4[C@@]3(CC{3}[C@@H](C4)O)C)C Donor (ID 34839): ?DGlcp(1-P-P-5)xXnucU Acceptor (ID 35268): Subst // Subst = cholesterol = SMILES C[C@H](CCCC(C)C)[C@H]1CC[C@@H]2[C@@]1(CC[C@H]3[C@H]2CC=C4[C@@]3(CC{3}[C@@H](C4)O)C)C Status: direct evidence in vivo
Confirmation methods: in vitro (partially purified protein), in vitro (crude extract), mutation ID: 1540 | Organism (ID 12415): Arabidopsis thaliana Organ/tissue: root, leaf, stem, flower, silique Full structure (ID 27657): CSDB ID(s): 60936 | Messner et al. 2003 DOI: 10.1007/s00425-002-0969-0 DeBolt et al. 2009 DOI: 10.1104/pp.109.140582 Sharma et al. 2007 DOI: 10.1016/j.abb.2007.01.024 Stucky et al. 2015 DOI: 10.1093/jxb/eru410 Warnecke et al. 1997 DOI: 10.1023/A:1005806119807 | |
| Synthesized dimer: DGlcp(1-3)Subst // Subst = ergosterol = SMILES O{3}[C@@H]4C/C3=C/C=C1\[C@H](CC[C@]2([C@H]1CC[C@@H]2[C@@H](/C=C/[C@H](C)C(C)C)C)C)[C@@]3(C)CC4 Donor (ID 34839): ?DGlcp(1-P-P-5)xXnucU Acceptor (ID 35269): Subst // Subst = ergosterol = SMILES O{3}[C@@H]4C/C3=C/C=C1\[C@H](CC[C@]2([C@H]1CC[C@@H]2[C@@H](/C=C/[C@H](C)C(C)C)C)C)[C@@]3(C)CC4 Status: evidence in vitro
Confirmation methods: in vitro (partially purified protein) ID: 1541 | Organism (ID 12415): Arabidopsis thaliana Organ/tissue: root, leaf, stem, flower, silique Full structure (ID 35270): | Messner et al. 2003 DOI: 10.1007/s00425-002-0969-0 DeBolt et al. 2009 DOI: 10.1104/pp.109.140582 Sharma et al. 2007 DOI: 10.1016/j.abb.2007.01.024 | |
| Synthesized dimer: DGlcp(1-3)Subst // Subst = brassicasterol = SMILES C[C@]12C(C{3}[C@@H](O)CC2)=CC[C@]3([H])[C@]1([H])CC[C@@]4(C)[C@@]3([H])CC[C@@H]4[C@@H](/C=C/[C@H](C)C(C)C)C Donor (ID 34839): ?DGlcp(1-P-P-5)xXnucU Acceptor (ID 35271): Subst // Subst = brassicasterol = SMILES C[C@]12C(C{3}[C@@H](O)CC2)=CC[C@]3([H])[C@]1([H])CC[C@@]4(C)[C@@]3([H])CC[C@@H]4[C@@H](/C=C/[C@H](C)C(C)C)C Status: direct evidence in vivo
Confirmation methods: in vitro (partially purified protein) ID: 1542 | Organism (ID 12415): Arabidopsis thaliana Organ/tissue: root, leaf, stem, flower, silique Full structure (ID 27656): CSDB ID(s): 60935 | Messner et al. 2003 DOI: 10.1007/s00425-002-0969-0 DeBolt et al. 2009 DOI: 10.1104/pp.109.140582 Sharma et al. 2007 DOI: 10.1016/j.abb.2007.01.024 Stucky et al. 2015 DOI: 10.1093/jxb/eru410 | |
| Synthesized dimer: DGlcp(1-3)Subst // Subst = campesterol = SMILES O{3}[C@H]1CC[C@]2(C)[C@@]3([H])CC[C@]4(C)[C@@H]([C@H](C)CC[C@@H](C(C)C)C)CC[C@@]4([H])[C@]3([H])CC=C2C1 Donor (ID 34839): ?DGlcp(1-P-P-5)xXnucU Acceptor (ID 35272): Subst // Subst = campesterol = SMILES O{3}[C@H]1CC[C@]2(C)[C@@]3([H])CC[C@]4(C)[C@@H]([C@H](C)CC[C@@H](C(C)C)C)CC[C@@]4([H])[C@]3([H])CC=C2C1 Status: indirect evidence in vivo
Confirmation methods: mutation ID: 1543 | Organism (ID 12415): Arabidopsis thaliana Organ/tissue: root, leaf, stem, flower, silique Full structure (ID 27655): CSDB ID(s): 60934 | Messner et al. 2003 DOI: 10.1007/s00425-002-0969-0 DeBolt et al. 2009 DOI: 10.1104/pp.109.140582 Stucky et al. 2015 DOI: 10.1093/jxb/eru410 | |
| Enzyme name: 80B1 UniProt ID: Q9XIG1.1 CAZy family: GT1 Gene name: UGT80B1 / AT1G43620 Gene GenBank ID: 840946 | Synthesized dimer: DGlcp(1-3)Subst // Subst = campesterol = SMILES O{3}[C@H]1CC[C@]2(C)[C@@]3([H])CC[C@]4(C)[C@@H]([C@H](C)CC[C@@H](C(C)C)C)CC[C@@]4([H])[C@]3([H])CC=C2C1 Donor (ID 34839): ?DGlcp(1-P-P-5)xXnucU Acceptor (ID 35272): Subst // Subst = campesterol = SMILES O{3}[C@H]1CC[C@]2(C)[C@@]3([H])CC[C@]4(C)[C@@H]([C@H](C)CC[C@@H](C(C)C)C)CC[C@@]4([H])[C@]3([H])CC=C2C1 Status: indirect evidence in vivo
Confirmation methods: mutation ID: 1544 | Organism (ID 12415): Arabidopsis thaliana Organ/tissue: leaf, seedling, developing seed Full structure (ID 27655): CSDB ID(s): 60934 | DeBolt et al. 2009 DOI: 10.1104/pp.109.140582 Stucky et al. 2015 DOI: 10.1093/jxb/eru410 |
| Synthesized dimer: DGlcp(1-3)Subst // Subst = brassicasterol = SMILES C[C@]12C(C{3}[C@@H](O)CC2)=CC[C@]3([H])[C@]1([H])CC[C@@]4(C)[C@@]3([H])CC[C@@H]4[C@@H](/C=C/[C@H](C)C(C)C)C Donor (ID 34839): ?DGlcp(1-P-P-5)xXnucU Acceptor (ID 35271): Subst // Subst = brassicasterol = SMILES C[C@]12C(C{3}[C@@H](O)CC2)=CC[C@]3([H])[C@]1([H])CC[C@@]4(C)[C@@]3([H])CC[C@@H]4[C@@H](/C=C/[C@H](C)C(C)C)C Status: indirect evidence in vivo
Confirmation methods: mutation ID: 1545 | Organism (ID 12415): Arabidopsis thaliana Organ/tissue: leaf, seedling, developing seed Full structure (ID 27656): CSDB ID(s): 60935 | ||
| Synthesized dimer: DGlcp(1-3)Subst // Subst = cholesterol = SMILES C[C@H](CCCC(C)C)[C@H]1CC[C@@H]2[C@@]1(CC[C@H]3[C@H]2CC=C4[C@@]3(CC{3}[C@@H](C4)O)C)C Donor (ID 34839): ?DGlcp(1-P-P-5)xXnucU Acceptor (ID 35268): Subst // Subst = cholesterol = SMILES C[C@H](CCCC(C)C)[C@H]1CC[C@@H]2[C@@]1(CC[C@H]3[C@H]2CC=C4[C@@]3(CC{3}[C@@H](C4)O)C)C Status: indirect evidence in vivo
Confirmation methods: mutation ID: 1546 | Organism (ID 12415): Arabidopsis thaliana Organ/tissue: leaf, seedling, developing seed Full structure (ID 27657): CSDB ID(s): 60936 | ||
| Enzyme name: 81A1 UniProt ID: O81770.1 CAZy family: GT28 Gene name: UGT81A1 / MGD1 / AT4G31780 Gene GenBank ID: 829306 | Synthesized dimer: bDGalp(1-1)DGro Donor (ID 35273): ?DGalp(1-P-P-5)xXnucU Acceptor (ID 35274): LIP(1-2)[LIP(1-3)]xDGro Status: direct evidence in vivo
Confirmation methods: in vitro (crude extract), expression in E.coli (as whole-cell biocatalyst), mutation ID: 1547 Notes: Possible LIP = hexadecatrienoic, alpha-linolenic, trans-delta3-hexadecenoic acids | Organism (ID 12415): Arabidopsis thaliana Expressed in: E. coli; flower, leaf, stem, root, silique, seed Full structure (ID 27658): CSDB ID(s): 60937, 60939, 61034, 61035, 61038, 66724 | Jorasch et al. 2000 DOI: 10.1046/j.1432-1327.2000.01414.x Kobayashi et al. 2004 DOI: 10.1104/pp.103.032656 Kobayashi et al. 2007 DOI: 10.1073/pnas.0704680104 Awai et al. 2001 DOI: 10.1073/pnas.181331498 Fujii et al. 2014 DOI: 10.1104/pp.114.250050 Rocha et al. 2013 DOI: 10.1016/j.biochi.2012.11.011 |
| Synthesized dimer: DGalp(1-?)Subst // Subst = NBD-ceramide (6-{[(N-7-nitrobenz-2-oxa-1,3-diazol-4-yl)amino]caproyl}sphingosine) Donor (ID 35273): ?DGalp(1-P-P-5)xXnucU Acceptor (ID 35275): Subst // Subst = NBD-ceramide (6-{[(N-7-nitrobenz-2-oxa-1,3-diazol-4-yl)amino]caproyl}sphingosine) Status: evidence in vitro
Confirmation methods: in vitro (crude extract) ID: 1548 | Organism (ID 12415): Arabidopsis thaliana Organ/tissue: flower, leaf, stem, root, silique, seed Full structure (ID 35276): | Jorasch et al. 2000 DOI: 10.1046/j.1432-1327.2000.01414.x Kobayashi et al. 2004 DOI: 10.1104/pp.103.032656 Kobayashi et al. 2007 DOI: 10.1073/pnas.0704680104 Awai et al. 2001 DOI: 10.1073/pnas.181331498 | |
| Synthesized dimer: bDGalp(1-1)DGro Donor (ID 35273): ?DGalp(1-P-P-5)xXnucU Acceptor (ID 35277): lXPam(1-2)[lXOle(1-3)]xDGro Status: evidence in vitro
Confirmation methods: in vitro (purified protein) ID: 1549 | Organism (ID 12415): Arabidopsis thaliana Organ/tissue: flower, leaf, stem, root, silique, seed Full structure (ID 35278): | Kobayashi et al. 2004 DOI: 10.1104/pp.103.032656 Kobayashi et al. 2007 DOI: 10.1073/pnas.0704680104 Awai et al. 2001 DOI: 10.1073/pnas.181331498 | |
| Synthesized dimer: bDGalp(1-1)DGro Donor (ID 35273): ?DGalp(1-P-P-5)xXnucU Acceptor (ID 35279): lXLin(1-2)[lXLin(1-3)]xDGro Status: evidence in vitro
Confirmation methods: in vitro (purified protein) ID: 1550 | Organism (ID 12415): Arabidopsis thaliana Organ/tissue: flower, leaf, stem, root, silique, seed Full structure (ID 19683): CSDB ID(s): 47110 | ||
| Enzyme name: MGD2 UniProt ID: O82730.1 CAZy family: GT28 Gene name: MGD2 / AT5G20410 Gene GenBank ID: 832163 | Synthesized dimer: DGalp(1-1)DGro Donor (ID 35273): ?DGalp(1-P-P-5)xXnucU Acceptor (ID 35277): lXPam(1-2)[lXOle(1-3)]xDGro Status: evidence in vitro
Confirmation methods: in vitro (purified protein) ID: 1551 | Organism (ID 12415): Arabidopsis thaliana Organ/tissue: flower, leaf, stem, root, silique Full structure (ID 35280): | Kobayashi et al. 2004 DOI: 10.1104/pp.103.032656 Awai et al. 2001 DOI: 10.1073/pnas.181331498 |
| Synthesized dimer: DGalp(1-1)DGro Donor (ID 35273): ?DGalp(1-P-P-5)xXnucU Acceptor (ID 35279): lXLin(1-2)[lXLin(1-3)]xDGro Status: evidence in vitro
Confirmation methods: in vitro (purified protein) ID: 1552 | Organism (ID 12415): Arabidopsis thaliana Organ/tissue: flower, leaf, stem, root, silique Full structure (ID 35281): | ||
| Enzyme name: MGD3 UniProt ID: Q9SI93.2 CAZy family: GT28 Gene name: MGD3 / AT2G11810 Gene GenBank ID: 815657 | Synthesized dimer: DGalp(1-1)DGro Donor (ID 35273): ?DGalp(1-P-P-5)xXnucU Acceptor (ID 35277): lXPam(1-2)[lXOle(1-3)]xDGro Status: evidence in vitro
Confirmation methods: in vitro (purified protein) ID: 1553 | Organism (ID 12415): Arabidopsis thaliana Organ/tissue: flower, leaf, stem, root, silique Full structure (ID 35280): | |
| Synthesized dimer: DGalp(1-1)DGro Donor (ID 35273): ?DGalp(1-P-P-5)xXnucU Acceptor (ID 35279): lXLin(1-2)[lXLin(1-3)]xDGro Status: evidence in vitro
Confirmation methods: in vitro (purified protein) ID: 1554 | Organism (ID 12415): Arabidopsis thaliana Organ/tissue: flower, leaf, stem, root, silique Full structure (ID 35281): | ||
| Enzyme name: 84A1 UniProt ID: Q5XF20.1 CAZy family: GT1 Gene name: UGT84A1 / At4g15480 Gene GenBank ID: 827220 | Synthesized dimer: bDGlcp(1-9)Sin Donor (ID 34839): ?DGlcp(1-P-P-5)xXnucU Acceptor (ID 35282): xXSin? Status: evidence in vitro
Confirmation methods: in vitro (purified protein), in vitro (crude extract) ID: 1555 | Organism (ID 12415): Arabidopsis thaliana Organ/tissue: root, flower, silique Full structure (ID 27661): CSDB ID(s): 60941, 66877, 68397, 68407 | Messner et al. 2003 DOI: 10.1007/s00425-002-0969-0 Lim et al. 2001 DOI: 10.1074/jbc.M007263200 Milkowski et al. 2000 DOI: 10.1016/S0014-5793(00)02270-5 Sinlapadech et al. 2007 DOI: 10.1111/j.1365-313X.2006.02984.x |
| Synthesized dimer: DGlcp(1-9)Cin Donor (ID 34839): ?DGlcp(1-P-P-5)xXnucU Acceptor (ID 35080): xXCin? Status: evidence in vitro
Confirmation methods: in vitro (purified protein), in vitro (crude extract) ID: 1556 | Organism (ID 12415): Arabidopsis thaliana Organ/tissue: root, flower, silique Full structure (ID 35081): | Messner et al. 2003 DOI: 10.1007/s00425-002-0969-0 Lim et al. 2001 DOI: 10.1074/jbc.M007263200 Milkowski et al. 2000 DOI: 10.1016/S0014-5793(00)02270-5 | |
| Synthesized dimer: DGlcp(1-9)pCoum Donor (ID 34839): ?DGlcp(1-P-P-5)xXnucU Acceptor (ID 35082): xXpCoum Status: evidence in vitro
Confirmation methods: in vitro (purified protein), in vitro (crude extract) ID: 1557 | Organism (ID 12415): Arabidopsis thaliana Organ/tissue: root, flower, silique Full structure (ID 35083): | ||
| Synthesized dimer: DGlcp(1-9)Caf Donor (ID 34839): ?DGlcp(1-P-P-5)xXnucU Acceptor (ID 34861): xXCaf? Status: evidence in vitro
Confirmation methods: in vitro (purified protein), in vitro (crude extract) ID: 1558 | Organism (ID 12415): Arabidopsis thaliana Organ/tissue: root, flower, silique Full structure (ID 35084): | ||
| Synthesized dimer: DGlcp(1-9)Fer Donor (ID 34839): ?DGlcp(1-P-P-5)xXnucU Acceptor (ID 34867): xXFer? Status: evidence in vitro
Confirmation methods: in vitro (purified protein), in vitro (crude extract) ID: 1559 | Organism (ID 12415): Arabidopsis thaliana Organ/tissue: root, flower, silique Full structure (ID 34868): | ||
| Synthesized dimer: DGlcp(1-7)Prcat Donor (ID 34839): ?DGlcp(1-P-P-5)xXnucU Acceptor (ID 34840): xXPrcat // Prcat = 3,4-dihydroxybenzoic (protocatechuic) acid Status: evidence in vitro
Confirmation methods: in vitro (purified protein) ID: 1560 | Organism (ID 12415): Arabidopsis thaliana Organ/tissue: root, flower, silique Full structure (ID 35098): | Lim et al. 2002 DOI: 10.1074/jbc.M109287200 Messner et al. 2003 DOI: 10.1007/s00425-002-0969-0 | |
| Synthesized dimer: DGlcp(1-7)4HOBz Donor (ID 34839): ?DGlcp(1-P-P-5)xXnucU Acceptor (ID 34982): xX4HOBz // 4HOBz = 4-hydroxybenzoic (p-hydroxybenzoic) acidz Status: evidence in vitro
Confirmation methods: in vitro (purified protein) ID: 1561 | Organism (ID 12415): Arabidopsis thaliana Organ/tissue: root, flower, silique Full structure (ID 35099): | ||
| Synthesized dimer: DGlcp(1-1)Subst // Subst = 2,4,5-trichlorophenol Donor (ID 34839): ?DGlcp(1-P-P-5)xXnucU Acceptor (ID 34851): Subst // Subst = 2,4,5-trichlorophenol Status: evidence in vitro
Confirmation methods: in vitro (purified protein) ID: 1562 | Organism (ID 12415): Arabidopsis thaliana Organ/tissue: root, flower, silique Full structure (ID 34852): | Messner et al. 2003 DOI: 10.1007/s00425-002-0969-0 | |
| Enzyme name: 84A2 / BRT1 UniProt ID: Q9LVF0.1 CAZy family: GT1 Gene name: UGT84A2 / At3g21560 Gene GenBank ID: 821710 | Synthesized dimer: bDGlcp(1-9)Sin Donor (ID 34839): ?DGlcp(1-P-P-5)xXnucU Acceptor (ID 35282): xXSin? Status: direct evidence in vivo
Confirmation methods: in vitro (purified protein), mutation ID: 1563 Notes: 84A2 is required for synthesis of xXSin?(9-2)bDXylp(1-2)[bDGlcp(1-4)xXpCoum(9-6)]bDGlcp(1-3)[xXMal(1-6)bDGlcp(1-5)]xXCyanidin (A11) in planta. | Organism (ID 12415): Arabidopsis thaliana Organ/tissue: root, flower, silique, seedling, leaf Full structure (ID 27661): CSDB ID(s): 60941, 66877, 68397, 68407 | Messner et al. 2003 DOI: 10.1007/s00425-002-0969-0 Lim et al. 2001 DOI: 10.1074/jbc.M007263200 Yonekura-Sakakibara et al. 2012 DOI: 10.1111/j.1365-313X.2011.04779.x Sinlapadech et al. 2007 DOI: 10.1111/j.1365-313X.2006.02984.x |
| Synthesized dimer: DGlcp(1-9)Fer Donor (ID 34839): ?DGlcp(1-P-P-5)xXnucU Acceptor (ID 34867): xXFer? Status: evidence in vitro
Confirmation methods: in vitro (purified protein) ID: 1564 | Organism (ID 12415): Arabidopsis thaliana Organ/tissue: root, flower, silique, seedling, leaf Full structure (ID 34868): | Messner et al. 2003 DOI: 10.1007/s00425-002-0969-0 Lim et al. 2001 DOI: 10.1074/jbc.M007263200 Sinlapadech et al. 2007 DOI: 10.1111/j.1365-313X.2006.02984.x | |
| Synthesized dimer: DGlcp(1-9)pCoum Donor (ID 34839): ?DGlcp(1-P-P-5)xXnucU Acceptor (ID 35082): xXpCoum Status: evidence in vitro
Confirmation methods: in vitro (purified protein) ID: 1565 | Organism (ID 12415): Arabidopsis thaliana Organ/tissue: root, flower, silique, seedling, leaf Full structure (ID 35083): | Messner et al. 2003 DOI: 10.1007/s00425-002-0969-0 Sinlapadech et al. 2007 DOI: 10.1111/j.1365-313X.2006.02984.x | |
| Synthesized dimer: DGlcp(1-1)Subst // Subst = 2,4,5-trichlorophenol Donor (ID 34839): ?DGlcp(1-P-P-5)xXnucU Acceptor (ID 34851): Subst // Subst = 2,4,5-trichlorophenol Status: evidence in vitro
Confirmation methods: in vitro (purified protein), in vitro (crude extract) ID: 1566 | Organism (ID 12415): Arabidopsis thaliana Organ/tissue: root, flower, silique, seedling, leaf Full structure (ID 34852): | Brazier-Hicks et al. 2007 DOI: 10.1073/pnas.0706421104 Messner et al. 2003 DOI: 10.1007/s00425-002-0969-0 Sinlapadech et al. 2007 DOI: 10.1111/j.1365-313X.2006.02984.x | |
| Synthesized dimer: DGlcp(1-1)Subst // Subst = 4-chlorothiophenol Donor (ID 34839): ?DGlcp(1-P-P-5)xXnucU Acceptor (ID 34855): Subst // Subst = 4-chlorothiophenol Status: evidence in vitro
Confirmation methods: in vitro (crude extract) ID: 1567 Notes: Low S-conjugating activity towards 4-chlorothiophenol | Organism (ID 12415): Arabidopsis thaliana Full structure (ID 34856): | Brazier-Hicks et al. 2007 DOI: 10.1073/pnas.0706421104 | |
| Enzyme name: 84A3 UniProt ID: O23401.1 CAZy family: GT1 Gene name: UGT84A3 / At4g15490 Gene GenBank ID: 827221 | Synthesized dimer: DGlcp(1-9)Cin Donor (ID 34839): ?DGlcp(1-P-P-5)xXnucU Acceptor (ID 35080): xXCin? Status: evidence in vitro
Confirmation methods: in vitro (purified protein), in vitro (crude extract) ID: 1568 | Organism (ID 12415): Arabidopsis thaliana Organ/tissue: seedling, leaf, root, stem, flower, silique Full structure (ID 35081): | Lim et al. 2001 DOI: 10.1074/jbc.M007263200 Milkowski et al. 2000 DOI: 10.1016/S0014-5793(00)02270-5 Sinlapadech et al. 2007 DOI: 10.1111/j.1365-313X.2006.02984.x |
| Synthesized dimer: DGlcp(1-9)pCoum Donor (ID 34839): ?DGlcp(1-P-P-5)xXnucU Acceptor (ID 35082): xXpCoum Status: evidence in vitro
Confirmation methods: in vitro (purified protein), in vitro (crude extract) ID: 1569 | Organism (ID 12415): Arabidopsis thaliana Organ/tissue: seedling, leaf, root, stem, flower, silique Full structure (ID 35083): | ||
| Synthesized dimer: DGlcp(1-9)Caf Donor (ID 34839): ?DGlcp(1-P-P-5)xXnucU Acceptor (ID 34861): xXCaf? Status: evidence in vitro
Confirmation methods: in vitro (purified protein), in vitro (crude extract) ID: 1570 | Organism (ID 12415): Arabidopsis thaliana Organ/tissue: seedling, leaf, root, stem, flower, silique Full structure (ID 35084): | ||
| Synthesized dimer: DGlcp(1-9)Fer Donor (ID 34839): ?DGlcp(1-P-P-5)xXnucU Acceptor (ID 34867): xXFer? Status: evidence in vitro
Confirmation methods: in vitro (purified protein), in vitro (crude extract) ID: 1571 | Organism (ID 12415): Arabidopsis thaliana Organ/tissue: seedling, leaf, root, stem, flower, silique Full structure (ID 34868): | ||
| Synthesized dimer: bDGlcp(1-9)Sin Donor (ID 34839): ?DGlcp(1-P-P-5)xXnucU Acceptor (ID 35282): xXSin? Status: evidence in vitro
Confirmation methods: in vitro (purified protein), in vitro (crude extract) ID: 1572 | Organism (ID 12415): Arabidopsis thaliana Organ/tissue: seedling, leaf, root, stem, flower, silique Full structure (ID 27661): CSDB ID(s): 60941, 66877, 68397, 68407 | ||
| Synthesized dimer: DGlcp(1-7)Subst // Subst = esculetin Donor (ID 34839): ?DGlcp(1-P-P-5)xXnucU Acceptor (ID 34847): Subst // Subst = esculetin Status: evidence in vitro
Confirmation methods: in vitro (purified protein) ID: 1573 Notes: NC: cichoriin | Organism (ID 12415): Arabidopsis thaliana Organ/tissue: seedling, leaf, root, stem, flower, silique Full structure (ID 34848): | Lim et al. 2003a DOI: 10.1093/glycob/cwg017 Sinlapadech et al. 2007 DOI: 10.1111/j.1365-313X.2006.02984.x | |
| Synthesized dimer: DGlcp(1-7)Subst // Subst = scopoletin Donor (ID 34839): ?DGlcp(1-P-P-5)xXnucU Acceptor (ID 34849): Subst // Subst = scopoletin Status: evidence in vitro
Confirmation methods: in vitro (purified protein) ID: 1574 Notes: NC: scopolin | Organism (ID 12415): Arabidopsis thaliana Organ/tissue: seedling, leaf, root, stem, flower, silique Full structure (ID 34850): | ||
| Synthesized dimer: DGlcp(1-1)Subst // Subst = 2,4,5-trichlorophenol Donor (ID 34839): ?DGlcp(1-P-P-5)xXnucU Acceptor (ID 34851): Subst // Subst = 2,4,5-trichlorophenol Status: evidence in vitro
Confirmation methods: in vitro (crude extract) ID: 1575 | Organism (ID 12415): Arabidopsis thaliana Full structure (ID 34852): | Brazier-Hicks et al. 2007 DOI: 10.1073/pnas.0706421104 | |
| Synthesized dimer: DGlcp(1-1)Subst // Subst = 3,4-dichloroaniline Donor (ID 34839): ?DGlcp(1-P-P-5)xXnucU Acceptor (ID 34886): Subst // Subst = 3,4-dichloroaniline Status: evidence in vitro
Confirmation methods: in vitro (crude extract) ID: 1576 Notes: Low N-conjugating activity towards 3,4-dichloroaniline | Organism (ID 12415): Arabidopsis thaliana Full structure (ID 34887): | ||
| Synthesized dimer: DGlcp(1-1)Subst // Subst = 4-chlorothiophenol Donor (ID 34839): ?DGlcp(1-P-P-5)xXnucU Acceptor (ID 34855): Subst // Subst = 4-chlorothiophenol Status: evidence in vitro
Confirmation methods: in vitro (crude extract) ID: 1577 Notes: S-conjugating activity towards 4-chlorothiophenol | Organism (ID 12415): Arabidopsis thaliana Full structure (ID 34856): | ||
| Enzyme name: 84A4 UniProt ID: O23402.1 CAZy family: GT1 Gene name: UGT84A4 / At4g15500 Gene GenBank ID: 827222 | Synthesized dimer: bDGlcp(1-9)Sin Donor (ID 34839): ?DGlcp(1-P-P-5)xXnucU Acceptor (ID 35282): xXSin? Status: evidence in vitro
Confirmation methods: in vitro (crude extract) ID: 1578 | Organism (ID 12415): Arabidopsis thaliana Organ/tissue: seedling, leaf, root, flower, silique Full structure (ID 27661): CSDB ID(s): 60941, 66877, 68397, 68407 | Milkowski et al. 2000 DOI: 10.1016/S0014-5793(00)02270-5 Sinlapadech et al. 2007 DOI: 10.1111/j.1365-313X.2006.02984.x |
| Synthesized dimer: DGlcp(1-9)Fer Donor (ID 34839): ?DGlcp(1-P-P-5)xXnucU Acceptor (ID 34867): xXFer? Status: evidence in vitro
Confirmation methods: in vitro (crude extract) ID: 1579 | Organism (ID 12415): Arabidopsis thaliana Organ/tissue: seedling, leaf, root, flower, silique Full structure (ID 34868): | ||
| Synthesized dimer: DGlcp(1-9)Cin Donor (ID 34839): ?DGlcp(1-P-P-5)xXnucU Acceptor (ID 35080): xXCin? Status: evidence in vitro
Confirmation methods: in vitro (crude extract) ID: 1580 | Organism (ID 12415): Arabidopsis thaliana Organ/tissue: seedling, leaf, root, flower, silique Full structure (ID 35081): | ||
| Synthesized dimer: DGlcp(1-9)pCoum Donor (ID 34839): ?DGlcp(1-P-P-5)xXnucU Acceptor (ID 35082): xXpCoum Status: evidence in vitro
Confirmation methods: in vitro (crude extract) ID: 1581 | Organism (ID 12415): Arabidopsis thaliana Organ/tissue: seedling, leaf, root, flower, silique Full structure (ID 35083): | ||
| Synthesized dimer: DGlcp(1-9)Caf Donor (ID 34839): ?DGlcp(1-P-P-5)xXnucU Acceptor (ID 34861): xXCaf? Status: evidence in vitro
Confirmation methods: in vitro (crude extract) ID: 1582 | Organism (ID 12415): Arabidopsis thaliana Organ/tissue: seedling, leaf, root, flower, silique Full structure (ID 35084): | ||
| Synthesized dimer: DGlcp(1-7)Subst // Subst = esculetin Donor (ID 34839): ?DGlcp(1-P-P-5)xXnucU Acceptor (ID 34847): Subst // Subst = esculetin Status: evidence in vitro
Confirmation methods: in vitro (purified protein) ID: 1583 Notes: NC: cichoriin | Organism (ID 12415): Arabidopsis thaliana Organ/tissue: seedling, leaf, root, flower, silique Full structure (ID 34848): | Lim et al. 2003a DOI: 10.1093/glycob/cwg017 Sinlapadech et al. 2007 DOI: 10.1111/j.1365-313X.2006.02984.x | |
| Synthesized dimer: DGlcp(1-1)Subst // Subst = 2,4,5-trichlorophenol Donor (ID 34839): ?DGlcp(1-P-P-5)xXnucU Acceptor (ID 34851): Subst // Subst = 2,4,5-trichlorophenol Status: evidence in vitro
Confirmation methods: in vitro (crude extract) ID: 1584 | Organism (ID 12415): Arabidopsis thaliana Full structure (ID 34852): | Brazier-Hicks et al. 2007 DOI: 10.1073/pnas.0706421104 | |
| Synthesized dimer: DGlcp(1-1)Subst // Subst = 3,4-dichloroaniline Donor (ID 34839): ?DGlcp(1-P-P-5)xXnucU Acceptor (ID 34886): Subst // Subst = 3,4-dichloroaniline Status: evidence in vitro
Confirmation methods: in vitro (crude extract) ID: 1585 Notes: Low N-conjugating activity towards 3,4-dichloroaniline | Organism (ID 12415): Arabidopsis thaliana Full structure (ID 34887): | ||
| Synthesized dimer: DGlcp(1-1)Subst // Subst = 4-chlorothiophenol Donor (ID 34839): ?DGlcp(1-P-P-5)xXnucU Acceptor (ID 34855): Subst // Subst = 4-chlorothiophenol Status: evidence in vitro
Confirmation methods: in vitro (crude extract) ID: 1586 Notes: Low S-conjugating activity towards 4-chlorothiophenol | Organism (ID 12415): Arabidopsis thaliana Full structure (ID 34856): | ||
| Enzyme name: 84B1 UniProt ID: O22182.1 CAZy family: GT1 Gene name: UGT84B1 / AT2G23260 Gene GenBank ID: 816858 | Synthesized dimer: DGlcp(1-1)Subst // Subst = 2,4,5-trichlorophenol Donor (ID 34839): ?DGlcp(1-P-P-5)xXnucU Acceptor (ID 34851): Subst // Subst = 2,4,5-trichlorophenol Status: evidence in vitro
Confirmation methods: in vitro (purified protein), in vitro (crude extract) ID: 1587 | Organism (ID 12415): Arabidopsis thaliana Organ/tissue: silique Full structure (ID 34852): | Brazier-Hicks et al. 2007 DOI: 10.1073/pnas.0706421104 Messner et al. 2003 DOI: 10.1007/s00425-002-0969-0 |
| Synthesized dimer: DGlcp(1-1)Subst // Subst = 3,4-dichloroaniline Donor (ID 34839): ?DGlcp(1-P-P-5)xXnucU Acceptor (ID 34886): Subst // Subst = 3,4-dichloroaniline Status: evidence in vitro
Confirmation methods: in vitro (crude extract) ID: 1588 Notes: Low N-conjugating activity towards 3,4-dichloroaniline | Organism (ID 12415): Arabidopsis thaliana Full structure (ID 34887): | Brazier-Hicks et al. 2007 DOI: 10.1073/pnas.0706421104 | |
| Synthesized dimer: DGlcp(1-1)Subst // Subst = 4-chlorothiophenol Donor (ID 34839): ?DGlcp(1-P-P-5)xXnucU Acceptor (ID 34855): Subst // Subst = 4-chlorothiophenol Status: evidence in vitro
Confirmation methods: in vitro (crude extract) ID: 1589 Notes: S-conjugating activity towards 4-chlorothiophenol | Organism (ID 12415): Arabidopsis thaliana Full structure (ID 34856): | ||
| Synthesized dimer: DGlcp(1-7)Subst // Subst = scopoletin Donor (ID 34839): ?DGlcp(1-P-P-5)xXnucU Acceptor (ID 34849): Subst // Subst = scopoletin Status: evidence in vitro
Confirmation methods: in vitro (purified protein) ID: 1590 Notes: NC: scopolin | Organism (ID 12415): Arabidopsis thaliana Organ/tissue: silique Full structure (ID 34850): | Lim et al. 2003a DOI: 10.1093/glycob/cwg017 Messner et al. 2003 DOI: 10.1007/s00425-002-0969-0 | |
| Synthesized dimer: bDGlcp(1-7)Quercetin Donor (ID 34839): ?DGlcp(1-P-P-5)xXnucU Acceptor (ID 34846): xXQuercetin Status: evidence in vitro
Confirmation methods: in vitro (purified protein), expression in E.coli (as whole-cell biocatalyst) ID: 1591 | Organism (ID 12415): Arabidopsis thaliana Expressed in: E. coli; silique Full structure (ID 20812): CSDB ID(s): 48671, 48907, 62907, 65980 | Lim et al. 2004 DOI: 10.1002/bit.20154 Messner et al. 2003 DOI: 10.1007/s00425-002-0969-0 | |
| Synthesized dimer: bDGlcp(1-8)Subst // Subst = indole-3-carboxylic acid = SMILES O={8}C(O)C1=CNC2=CC=CC=C21 Donor (ID 34839): ?DGlcp(1-P-P-5)xXnucU Acceptor (ID 35068): Subst // Subst = indole-3-carboxylic acid = SMILES O={8}C(O)C1=CNC2=CC=CC=C21 Status: evidence in vitro
Confirmation methods: in vitro (purified protein) ID: 1592 Notes: Low activity | Organism (ID 12415): Arabidopsis thaliana Organ/tissue: silique Full structure (ID 35069): | Messner et al. 2003 DOI: 10.1007/s00425-002-0969-0 Jackson et al. 2001 DOI: 10.1074/jbc.M006185200 | |
| Synthesized dimer: bDGlcp(1-11)Subst // Subst = indole-3-acetate Donor (ID 34839): ?DGlcp(1-P-P-5)xXnucU Acceptor (ID 35064): Subst // Subst = indole-3-acetic acid Status: direct evidence in vivo
Confirmation methods: in vitro (purified protein), in vitro (crude extract), overexpression ID: 1593 | Organism (ID 12415): Arabidopsis thaliana Organ/tissue: silique Full structure (ID 35065): | Messner et al. 2003 DOI: 10.1007/s00425-002-0969-0 Grubb et al. 2004 DOI: 10.1111/j.1365-313X.2004.02261.x Tanaka et al. 2014 DOI: 10.1093/pcp/pct173 Jackson et al. 2001 DOI: 10.1074/jbc.M006185200 Jackson et al. 2002 DOI: 10.1046/j.1365-313X.2002.01445.x | |
| Synthesized dimer: bDGlcp(1-12)Subst // Subst = indole-3-propionate Donor (ID 34839): ?DGlcp(1-P-P-5)xXnucU Acceptor (ID 35062): Subst // Subst = indole-3-propionic acid Status: evidence in vitro
Confirmation methods: in vitro (purified protein) ID: 1594 | Organism (ID 12415): Arabidopsis thaliana Organ/tissue: silique Full structure (ID 35063): | Messner et al. 2003 DOI: 10.1007/s00425-002-0969-0 Jackson et al. 2001 DOI: 10.1074/jbc.M006185200 | |
| Synthesized dimer: bDGlcp(1-13)Subst // Subst = hormodin = SMILES O={13}C(O)CCCC1=CNC2=C1C=CC=C2 Donor (ID 34839): ?DGlcp(1-P-P-5)xXnucU Acceptor (ID 35061): Subst // Subst = hormodin = SMILES O={13}C(O)CCCC1=CNC2=C1C=CC=C2 Status: evidence in vitro
Confirmation methods: in vitro (purified protein) ID: 1595 | Organism (ID 12415): Arabidopsis thaliana Organ/tissue: silique Full structure (ID 27583): CSDB ID(s): 60839, 60841 | ||
| Synthesized dimer: bDGlcp(1-11)Subst // Subst = 5-hydroxy-indole-3-acetate Donor (ID 34839): ?DGlcp(1-P-P-5)xXnucU Acceptor (ID 35100): Subst // Subst = 5-hydroxy-indole-3-acetic acid Status: evidence in vitro
Confirmation methods: in vitro (purified protein) ID: 1596 | Organism (ID 12415): Arabidopsis thaliana Organ/tissue: silique Full structure (ID 35101): | Messner et al. 2003 DOI: 10.1007/s00425-002-0969-0 Tanaka et al. 2014 DOI: 10.1093/pcp/pct173 Jackson et al. 2001 DOI: 10.1074/jbc.M006185200 | |
| Synthesized dimer: bDGlcp(1-1)Trp Donor (ID 34839): ?DGlcp(1-P-P-5)xXnucU Acceptor (ID 35283): x?Trp? Status: evidence in vitro
Confirmation methods: in vitro (purified protein) ID: 1597 Notes: Low activity | Organism (ID 12415): Arabidopsis thaliana Organ/tissue: silique Full structure (ID 35284): | Messner et al. 2003 DOI: 10.1007/s00425-002-0969-0 Jackson et al. 2001 DOI: 10.1074/jbc.M006185200 | |
| Synthesized dimer: bDGlcp(1-11)Subst // Subst = 2-oxindole-3-acetate Donor (ID 34839): ?DGlcp(1-P-P-5)xXnucU Acceptor (ID 35072): Subst // Subst = 2-oxindole-3-acetic acid Status: evidence in vitro
Confirmation methods: in vitro (purified protein) ID: 1598 Notes: Low activity | Organism (ID 12415): Arabidopsis thaliana Organ/tissue: silique Full structure (ID 35073): | ||
| Synthesized dimer: bDGlcp(1-9)Cin Donor (ID 34839): ?DGlcp(1-P-P-5)xXnucU Acceptor (ID 35080): xXCin? Status: evidence in vitro
Confirmation methods: in vitro (purified protein) ID: 1599 | Organism (ID 12415): Arabidopsis thaliana Organ/tissue: silique Full structure (ID 30700): CSDB ID(s): 64951, 66356 | ||
| Synthesized dimer: bDGlcp(1-9)pCoum Donor (ID 34839): ?DGlcp(1-P-P-5)xXnucU Acceptor (ID 35082): xXpCoum Status: evidence in vitro
Confirmation methods: in vitro (purified protein) ID: 1600 | Organism (ID 12415): Arabidopsis thaliana Organ/tissue: silique Full structure (ID 28176): CSDB ID(s): 61428 | ||
| Synthesized dimer: bDGlcp(1-9)Caf Donor (ID 34839): ?DGlcp(1-P-P-5)xXnucU Acceptor (ID 34861): xXCaf? Status: evidence in vitro
Confirmation methods: in vitro (purified protein) ID: 1601 Notes: Low activity | Organism (ID 12415): Arabidopsis thaliana Organ/tissue: silique Full structure (ID 35285): | ||
| Synthesized dimer: bDGlcp(1-9)Sin Donor (ID 34839): ?DGlcp(1-P-P-5)xXnucU Acceptor (ID 35282): xXSin? Status: evidence in vitro
Confirmation methods: in vitro (purified protein) ID: 1602 Notes: Low activity | Organism (ID 12415): Arabidopsis thaliana Organ/tissue: silique Full structure (ID 27661): CSDB ID(s): 60941, 66877, 68397, 68407 | ||
| Synthesized dimer: DGlcp(1-9)Fer Donor (ID 34839): ?DGlcp(1-P-P-5)xXnucU Acceptor (ID 34867): xXFer? Status: evidence in vitro
Confirmation methods: in vitro (purified protein) ID: 1603 | Organism (ID 12415): Arabidopsis thaliana Organ/tissue: silique Full structure (ID 34868): | ||
| Synthesized dimer: bDGlcp(1-12)Subst // Subst = naphthaleneacetate Donor (ID 34839): ?DGlcp(1-P-P-5)xXnucU Acceptor (ID 35066): Subst // Subst = naphthaleneacetic acid Status: evidence in vitro
Confirmation methods: in vitro (purified protein) ID: 1604 | Organism (ID 12415): Arabidopsis thaliana Organ/tissue: silique Full structure (ID 35067): | ||
| Synthesized dimer: bDGlcp(1-8)Subst // Subst = 2,4-dichlorophenoxyacetate Donor (ID 34839): ?DGlcp(1-P-P-5)xXnucU Acceptor (ID 35070): Subst // Subst = 2,4-dichlorophenoxyacetic acid Status: evidence in vitro
Confirmation methods: in vitro (purified protein) ID: 1605 Notes: Low activity | Organism (ID 12415): Arabidopsis thaliana Organ/tissue: silique Full structure (ID 35071): | ||
| Synthesized dimer: DGlcp(1-8)Subst // Subst = phenylacetate Donor (ID 34839): ?DGlcp(1-P-P-5)xXnucU Acceptor (ID 35286): Subst // Subst = phenylacetic acid Status: evidence in vitro
Confirmation methods: in vitro (crude extract) ID: 1606 | Organism (ID 12415): Arabidopsis thaliana Organ/tissue: silique Full structure (ID 35287): | Messner et al. 2003 DOI: 10.1007/s00425-002-0969-0 Grubb et al. 2004 DOI: 10.1111/j.1365-313X.2004.02261.x | |
| Synthesized dimer: DGlcp(1-1)Subst // Subst = (+/-)-abscisic acid = SMILES CC1=CC(=O)CC({51}[C]1(/C=C/C(=C\{1}C(=O)O)/C)O)(C)C Donor (ID 34839): ?DGlcp(1-P-P-5)xXnucU Acceptor (ID 35288): Subst // Subst = (+/-)-abscisic acid = SMILES CC1=CC(=O)CC({51}[C]1(/C=C/C(=C\{1}C(=O)O)/C)O)(C)C Status: evidence in vitro
Confirmation methods: in vitro (purified protein) ID: 1607 | Organism (ID 12415): Arabidopsis thaliana Organ/tissue: silique Full structure (ID 35289): | Lim et al. 2005a DOI: 10.1016/j.tetasy.2004.11.062 Messner et al. 2003 DOI: 10.1007/s00425-002-0969-0 | |
| Enzyme name: 84B2 UniProt ID: O22183.1 CAZy family: GT1 Gene name: UGT84B2 / AT2G23250 Gene GenBank ID: 816857 | Synthesized dimer: bDGlcp(1-11)Subst // Subst = indole-3-acetate Donor (ID 34839): ?DGlcp(1-P-P-5)xXnucU Acceptor (ID 35064): Subst // Subst = indole-3-acetic acid Status: evidence in vitro
Confirmation methods: in vitro (purified protein) ID: 1608 | Organism (ID 12415): Arabidopsis thaliana Full structure (ID 35065): | Jackson et al. 2001 DOI: 10.1074/jbc.M006185200 |
| Synthesized dimer: bDGlcp(1-12)Subst // Subst = indole-3-propionate Donor (ID 34839): ?DGlcp(1-P-P-5)xXnucU Acceptor (ID 35062): Subst // Subst = indole-3-propionic acid Status: evidence in vitro
Confirmation methods: in vitro (purified protein) ID: 1609 | Organism (ID 12415): Arabidopsis thaliana Full structure (ID 35063): | ||
| Synthesized dimer: bDGlcp(1-13)Subst // Subst = hormodin = SMILES O={13}C(O)CCCC1=CNC2=C1C=CC=C2 Donor (ID 34839): ?DGlcp(1-P-P-5)xXnucU Acceptor (ID 35061): Subst // Subst = hormodin = SMILES O={13}C(O)CCCC1=CNC2=C1C=CC=C2 Status: evidence in vitro
Confirmation methods: in vitro (purified protein) ID: 1610 | Organism (ID 12415): Arabidopsis thaliana Full structure (ID 27583): CSDB ID(s): 60839, 60841 | ||
| Synthesized dimer: bDGlcp(1-11)Subst // Subst = 5-hydroxy-indole-3-acetate Donor (ID 34839): ?DGlcp(1-P-P-5)xXnucU Acceptor (ID 35100): Subst // Subst = 5-hydroxy-indole-3-acetic acid Status: evidence in vitro
Confirmation methods: in vitro (purified protein) ID: 1611 | Organism (ID 12415): Arabidopsis thaliana Full structure (ID 35101): | ||
| Synthesized dimer: bDGlcp(1-9)Cin Donor (ID 34839): ?DGlcp(1-P-P-5)xXnucU Acceptor (ID 35080): xXCin? Status: evidence in vitro
Confirmation methods: in vitro (purified protein) ID: 1612 | Organism (ID 12415): Arabidopsis thaliana Full structure (ID 30700): CSDB ID(s): 64951, 66356 | ||
| Synthesized dimer: bDGlcp(1-12)Subst // Subst = naphthaleneacetate Donor (ID 34839): ?DGlcp(1-P-P-5)xXnucU Acceptor (ID 35066): Subst // Subst = naphthaleneacetic acid Status: evidence in vitro
Confirmation methods: in vitro (purified protein) ID: 1613 | Organism (ID 12415): Arabidopsis thaliana Full structure (ID 35067): | ||
| Synthesized dimer: DGlcp(1-1)Subst // Subst = (+/-)-abscisic acid = SMILES CC1=CC(=O)CC({51}[C]1(/C=C/C(=C\{1}C(=O)O)/C)O)(C)C Donor (ID 34839): ?DGlcp(1-P-P-5)xXnucU Acceptor (ID 35288): Subst // Subst = (+/-)-abscisic acid = SMILES CC1=CC(=O)CC({51}[C]1(/C=C/C(=C\{1}C(=O)O)/C)O)(C)C Status: evidence in vitro
Confirmation methods: in vitro (purified protein) ID: 1614 | Organism (ID 12415): Arabidopsis thaliana Full structure (ID 35289): | Lim et al. 2005a DOI: 10.1016/j.tetasy.2004.11.062 | |
| Enzyme name: 85A1 UniProt ID: Q9SK82.1 CAZy family: GT1 Gene name: UGT85A1 / AT1G22400 Gene GenBank ID: 838846 | Synthesized dimer: DGlcp(1-13)Subst // Subst = trans-zeatin = SMILES C/C(=C\CNC1=NC=NC2=C1{7}NC=N2)/{13}CO Donor (ID 34839): ?DGlcp(1-P-P-5)xXnucU Acceptor (ID 34987): Subst // Subst = trans-zeatin = SMILES C/C(=C\CNC1=NC=NC2=C1{7}NC=N2)/{13}CO Status: direct evidence in vivo
Confirmation methods: in vitro (purified protein), overexpression, mutation ID: 1615 Notes: Glc is linked to terminal OH group. | Organism (ID 12415): Arabidopsis thaliana Organ/tissue: seed, seedling, flower, leaf, stem, silique, root Full structure (ID 34988): | Hou et al. 2004 DOI: 10.1074/jbc.M409569200 Smehilova et al. 2016 DOI: 10.3389/fpls.2016.01264 Jin et al. 2013b DOI: 10.1007/s00425-012-1818-4 Woo et al. 2007 DOI: 10.1016/j.ygeno.2007.03.014 |
| Synthesized dimer: DGlcp(1-13)Subst // Subst = dihydrozeatin = SMILES C/C(CCNC1=NC=NC2=C1{7}NC=N2)/{13}CO Donor (ID 34839): ?DGlcp(1-P-P-5)xXnucU Acceptor (ID 34989): Subst // Subst = dihydrozeatin = SMILES C/C(CCNC1=NC=NC2=C1{7}NC=N2)/{13}CO Status: direct evidence in vivo
Confirmation methods: in vitro (purified protein), mutation ID: 1616 Notes: Glc is linked to terminal OH group. | Organism (ID 12415): Arabidopsis thaliana Organ/tissue: seed, seedling, flower, leaf, stem, silique, root Full structure (ID 34990): | ||
| Synthesized dimer: DGlcp(1-14)Subst // Subst = cis-zeatin = SMILES C/C(=C/CNC1=NC=NC2=C1{7}NC=N2)/{14}CO Donor (ID 34839): ?DGlcp(1-P-P-5)xXnucU Acceptor (ID 34991): Subst // Subst = cis-zeatin = SMILES C/C(=C/CNC1=NC=NC2=C1{7}NC=N2)/{14}CO Status: direct evidence in vivo
Confirmation methods: in vitro (purified protein), mutation ID: 1617 Notes: Glc is linked to terminal OH group. | Organism (ID 12415): Arabidopsis thaliana Organ/tissue: seed, seedling, flower, leaf, stem, silique, root Full structure (ID 27620): CSDB ID(s): 60882, 60887 | ||
| Synthesized dimer: DGlcp(1-9)Subst // Subst = cis-zeatin (9-protonated) = SMILES O{14}C/C(C)=C\CNC1=C2{7}NC={9}[N+]([H])C2=NC=N1 Donor (ID 34839): ?DGlcp(1-P-P-5)xXnucU Acceptor (ID 34991): Subst // Subst = cis-zeatin = SMILES C/C(=C/CNC1=NC=NC2=C1{7}NC=N2)/{14}CO Status: indirect evidence in vivo
Confirmation methods: mutation ID: 1618 | Organism (ID 12415): Arabidopsis thaliana Organ/tissue: seed, seedling, flower, leaf, stem, silique, root Full structure (ID 35122): | Smehilova et al. 2016 DOI: 10.3389/fpls.2016.01264 Jin et al. 2013b DOI: 10.1007/s00425-012-1818-4 Woo et al. 2007 DOI: 10.1016/j.ygeno.2007.03.014 | |
| Synthesized dimer: DGlcp(1-9)Subst // Subst = dihydrozeatin (9-protonated) = SMILES O{13}CC(C)CCNC1=C2{7}NC={9}[N+]([H])C2=NC=N1 Donor (ID 34839): ?DGlcp(1-P-P-5)xXnucU Acceptor (ID 34989): Subst // Subst = dihydrozeatin = SMILES C/C(CCNC1=NC=NC2=C1{7}NC=N2)/{13}CO Status: indirect evidence in vivo
Confirmation methods: mutation ID: 1619 | Organism (ID 12415): Arabidopsis thaliana Organ/tissue: seed, seedling, flower, leaf, stem, silique, root Exact full structure is unknown | Smehilova et al. 2016 DOI: 10.3389/fpls.2016.01264 | |
| Enzyme name: 85A4 UniProt ID: Q9M9E7.1 CAZy family: GT1 Gene name: UGT85A4 / AT1G78270 Gene GenBank ID: 844162 | Synthesized dimer: DGlcp(1-1)Subst // Subst = 2,4,5-trichlorophenol Donor (ID 34839): ?DGlcp(1-P-P-5)xXnucU Acceptor (ID 34851): Subst // Subst = 2,4,5-trichlorophenol Status: evidence in vitro
Confirmation methods: in vitro (crude extract) ID: 1620 | Organism (ID 12415): Arabidopsis thaliana Full structure (ID 34852): | Brazier-Hicks et al. 2007 DOI: 10.1073/pnas.0706421104 |
| Synthesized dimer: DGlcp(1-1)Subst // Subst = 4-chlorothiophenol Donor (ID 34839): ?DGlcp(1-P-P-5)xXnucU Acceptor (ID 34855): Subst // Subst = 4-chlorothiophenol Status: evidence in vitro
Confirmation methods: in vitro (crude extract) ID: 1621 Notes: S-conjugating activity towards 4-chlorothiophenol | Organism (ID 12415): Arabidopsis thaliana Full structure (ID 34856): | ||
| Enzyme name: 88A1 UniProt ID: Q9LK73.1 CAZy family: GT1 Gene name: UGT88A1 / AT3G16520 Gene GenBank ID: 820900 | Synthesized dimer: bDGlcp(1-7)Quercetin Donor (ID 34839): ?DGlcp(1-P-P-5)xXnucU Acceptor (ID 34846): xXQuercetin Status: evidence in vitro
Confirmation methods: in vitro (purified protein) ID: 1622 | Organism (ID 12415): Arabidopsis thaliana Full structure (ID 20812): CSDB ID(s): 48671, 48907, 62907, 65980 | Lim et al. 2004 DOI: 10.1002/bit.20154 |
| Synthesized dimer: bDGlcp(1-3)Quercetin Donor (ID 34839): ?DGlcp(1-P-P-5)xXnucU Acceptor (ID 34846): xXQuercetin Status: evidence in vitro
Confirmation methods: in vitro (purified protein), expression in E.coli (as whole-cell biocatalyst) ID: 1623 | Organism (ID 12415): Arabidopsis thaliana Expressed in: E. coli Full structure (ID 19231): CSDB ID(s): 44612, 46693, 47475, 48669, 48941, 60081, 60203, 60273, 60908, 61152, 61413, 61821, 62231, 63006, 63205, 63329, 63829, 64121, 64673, 64772, 64781, 64887, 64953, 65376, 65396, 65565, 65724, 65828, 65928, 65944, 65954, 65977, 65989, 66185, 66208, 66350, 66379, 66413, 66519, 66554, 66580, 66938, 66944, 67032, 67190, 67294, 67570, 67580, 67607, 67635, 67646, 67720, 67766, 67864, 67926, 67995, 68004, 68170, 68616, 68651, 68741, 68865, 120586, 131302, 139116, 146361, 146591, 146662, 146676, 146799, 270704, 270775 | ||
| Synthesized dimer: bDGlcp(1-4')Quercetin Donor (ID 34839): ?DGlcp(1-P-P-5)xXnucU Acceptor (ID 34846): xXQuercetin Status: evidence in vitro
Confirmation methods: in vitro (purified protein), expression in E.coli (as whole-cell biocatalyst), mutation (in vitro) ID: 1624 | Organism (ID 12415): Arabidopsis thaliana Expressed in: E. coli Full structure (ID 30998): CSDB ID(s): 61413, 65566, 65821, 66939, 67765, 67950, 68408, 68428, 68617, 68745 | Lim et al. 2004 DOI: 10.1002/bit.20154 Weng et al. 2019 DOI: 10.1080/21655979.2019.1607710 | |
| Synthesized dimer: bDGlcp(1-3')Quercetin Donor (ID 34839): ?DGlcp(1-P-P-5)xXnucU Acceptor (ID 34846): xXQuercetin Status: evidence in vitro
Confirmation methods: in vitro (purified protein), expression in E.coli (as whole-cell biocatalyst) ID: 1625 | Organism (ID 12415): Arabidopsis thaliana Expressed in: E. coli Full structure (ID 34857): | Lim et al. 2004 DOI: 10.1002/bit.20154 | |
| Synthesized dimer: DGlcp(1-7)Subst // Subst = scopoletin Donor (ID 34839): ?DGlcp(1-P-P-5)xXnucU Acceptor (ID 34849): Subst // Subst = scopoletin Status: evidence in vitro
Confirmation methods: in vitro (purified protein) ID: 1626 Notes: NC: scopolin | Organism (ID 12415): Arabidopsis thaliana Full structure (ID 34850): | Lim et al. 2003a DOI: 10.1093/glycob/cwg017 | |
| Synthesized dimer: DGlcp(1-6)Subst // Subst = esculetin Donor (ID 34839): ?DGlcp(1-P-P-5)xXnucU Acceptor (ID 34847): Subst // Subst = esculetin Status: evidence in vitro
Confirmation methods: in vitro (purified protein) ID: 1627 Notes: NC: esculin | Organism (ID 12415): Arabidopsis thaliana Full structure (ID 34891): | ||
| Synthesized dimer: DGlcp(1-1)Subst // Subst = 2,4,5-trichlorophenol Donor (ID 34839): ?DGlcp(1-P-P-5)xXnucU Acceptor (ID 34851): Subst // Subst = 2,4,5-trichlorophenol Status: evidence in vitro
Confirmation methods: in vitro (crude extract) ID: 1628 | Organism (ID 12415): Arabidopsis thaliana Full structure (ID 34852): | Brazier-Hicks et al. 2007 DOI: 10.1073/pnas.0706421104 | |
| Synthesized dimer: DGlcp(1-1)Subst // Subst = 3,4-dichloroaniline Donor (ID 34839): ?DGlcp(1-P-P-5)xXnucU Acceptor (ID 34886): Subst // Subst = 3,4-dichloroaniline Status: evidence in vitro
Confirmation methods: in vitro (crude extract) ID: 1629 Notes: N-conjugating activity towards 3,4-dichloroaniline | Organism (ID 12415): Arabidopsis thaliana Full structure (ID 34887): | ||
| Synthesized dimer: DGlcp(1-1)Subst // Subst = 4-chlorothiophenol Donor (ID 34839): ?DGlcp(1-P-P-5)xXnucU Acceptor (ID 34855): Subst // Subst = 4-chlorothiophenol Status: evidence in vitro
Confirmation methods: in vitro (crude extract) ID: 1630 Notes: S-conjugating activity towards 4-chlorothiophenol | Organism (ID 12415): Arabidopsis thaliana Full structure (ID 34856): | ||
| Enzyme name: 89A2 UniProt ID: Q9LZD8.1 CAZy family: GT1 Gene name: AT5G03490 Gene GenBank ID: 831823 | Synthesized dimer: DGlcp(1-3)Prcat Donor (ID 34839): ?DGlcp(1-P-P-5)xXnucU Acceptor (ID 34840): xXPrcat // Prcat = 3,4-dihydroxybenzoic (protocatechuic) acid Status: evidence in vitro
Confirmation methods: in vitro (purified protein) ID: 1631 | Organism (ID 12415): Arabidopsis thaliana Full structure (ID 34890): | Lim et al. 2002 DOI: 10.1074/jbc.M109287200 |
| Synthesized dimer: DGlcp(1-5)Gent Donor (ID 34839): ?DGlcp(1-P-P-5)xXnucU Acceptor (ID 34844): xXGent // Gent = 2,5-dihydroxybenzoic (gentisic) acid Status: evidence in vitro
Confirmation methods: in vitro (purified protein) ID: 1632 Notes: UGT89A2 from Col-0 is highly selective toward UDP-xylose as the sugar donor, and the isoform from C24 can utilize both UDP-glucose and UDP-xylose. | Organism (ID 12415): Arabidopsis thaliana Full structure (ID 34845): | Lim et al. 2002 DOI: 10.1074/jbc.M109287200 Chen, Li 2017 DOI: 10.1111/tpj.13271 | |
| Synthesized dimer: bDXylp(1-5)Gent Donor (ID 35290): ?DXylp(1-P-P-5)xXnucU Acceptor (ID 34844): xXGent // Gent = 2,5-dihydroxybenzoic (gentisic) acid Status: direct evidence in vivo
Confirmation methods: in vitro (crude extract), natural genetic variation, in vitro (purified protein) ID: 1633 Notes: UGT89A2 from Col-0 is highly selective toward UDP-xylose as the sugar donor, and the isoform from C24 can utilize both UDP-glucose and UDP-xylose. | Organism (ID 12415): Arabidopsis thaliana Full structure (ID 27663): CSDB ID(s): 60949 | Chen, Li 2017 DOI: 10.1111/tpj.13271 Li X et al. 2014 DOI: 10.1534/genetics.114.168690 | |
| Synthesized dimer: DXylp(1-?)2,3HOBz Donor (ID 35290): ?DXylp(1-P-P-5)xXnucU Acceptor (ID 35291): xX2,3HOBz // 2,3HOBz = 2,3-dihydroxybenzoic acid Status: evidence in vitro
Confirmation methods: in vitro (purified protein) ID: 1634 Notes: UGT89A2 from Col-0 is highly selective toward UDP-xylose as the sugar donor, and the isoform from C24 can utilize both UDP-glucose and UDP-xylose but with a higher affinity to the glucose donor. | Organism (ID 16355): Arabidopsis thaliana Col-0 Full structure (ID 35292): | Chen, Li 2017 DOI: 10.1111/tpj.13271 | |
| Synthesized dimer: DXylp(1-?)2,3HOBz Donor (ID 35290): ?DXylp(1-P-P-5)xXnucU Acceptor (ID 35291): xX2,3HOBz // 2,3HOBz = 2,3-dihydroxybenzoic acid Status: evidence in vitro
Confirmation methods: in vitro (purified protein) ID: 1635 Notes: UGT89A2 from Col-0 is highly selective toward UDP-xylose as the sugar donor, and the isoform from C24 can utilize both UDP-glucose and UDP-xylose but with a higher affinity to the glucose donor. | Organism (ID 16356): Arabidopsis thaliana C24 Full structure (ID 35292): | ||
| Synthesized dimer: DGlcp(1-?)2,3HOBz Donor (ID 34839): ?DGlcp(1-P-P-5)xXnucU Acceptor (ID 35291): xX2,3HOBz // 2,3HOBz = 2,3-dihydroxybenzoic acid Status: evidence in vitro
Confirmation methods: in vitro (purified protein) ID: 1636 Notes: UGT89A2 from Col-0 is highly selective toward UDP-xylose as the sugar donor, and the isoform from C24 can utilize both UDP-glucose and UDP-xylose but with a higher affinity to the glucose donor. | Organism (ID 16356): Arabidopsis thaliana C24 Full structure (ID 35293): | ||
| Enzyme name: 89B1 UniProt ID: Q9C9B0.2 CAZy family: GT1 Gene name: UGT89B1 / AT1G73880 Gene GenBank ID: 843725 | Synthesized dimer: DGlcp(1-4)Prcat Donor (ID 34839): ?DGlcp(1-P-P-5)xXnucU Acceptor (ID 34840): xXPrcat // Prcat = 3,4-dihydroxybenzoic (protocatechuic) acid Status: evidence in vitro
Confirmation methods: in vitro (purified protein) ID: 1637 | Organism (ID 12415): Arabidopsis thaliana Full structure (ID 34841): | Lim et al. 2002 DOI: 10.1074/jbc.M109287200 |
| Synthesized dimer: DGlcp(1-4)4HOBz Donor (ID 34839): ?DGlcp(1-P-P-5)xXnucU Acceptor (ID 34982): xX4HOBz // 4HOBz = 4-hydroxybenzoic (p-hydroxybenzoic) acidz Status: evidence in vitro
Confirmation methods: in vitro (purified protein) ID: 1638 | Organism (ID 12415): Arabidopsis thaliana Full structure (ID 34983): | ||
| Synthesized dimer: DGlcp(1-4)bRes Donor (ID 34839): ?DGlcp(1-P-P-5)xXnucU Acceptor (ID 34842): xXbRes // bRes = 2,4-dihydroxybenzoic (beta-resorcyclic) acid Status: evidence in vitro
Confirmation methods: in vitro (purified protein) ID: 1639 | Organism (ID 12415): Arabidopsis thaliana Full structure (ID 34843): | ||
| Synthesized dimer: DGlcp(1-5)Gent Donor (ID 34839): ?DGlcp(1-P-P-5)xXnucU Acceptor (ID 34844): xXGent // Gent = 2,5-dihydroxybenzoic (gentisic) acid Status: evidence in vitro
Confirmation methods: in vitro (purified protein) ID: 1640 | Organism (ID 12415): Arabidopsis thaliana Full structure (ID 34845): | ||
| Synthesized dimer: bDGlcp(1-7)Quercetin Donor (ID 34839): ?DGlcp(1-P-P-5)xXnucU Acceptor (ID 34846): xXQuercetin Status: evidence in vitro
Confirmation methods: in vitro (purified protein), expression in E.coli (as whole-cell biocatalyst) ID: 1641 | Organism (ID 12415): Arabidopsis thaliana Expressed in: E. coli Full structure (ID 20812): CSDB ID(s): 48671, 48907, 62907, 65980 | Lim et al. 2004 DOI: 10.1002/bit.20154 | |
| Synthesized dimer: bDGlcp(1-3)Quercetin Donor (ID 34839): ?DGlcp(1-P-P-5)xXnucU Acceptor (ID 34846): xXQuercetin Status: evidence in vitro
Confirmation methods: in vitro (purified protein), expression in E.coli (as whole-cell biocatalyst) ID: 1642 | Organism (ID 12415): Arabidopsis thaliana Expressed in: E. coli Full structure (ID 19231): CSDB ID(s): 44612, 46693, 47475, 48669, 48941, 60081, 60203, 60273, 60908, 61152, 61413, 61821, 62231, 63006, 63205, 63329, 63829, 64121, 64673, 64772, 64781, 64887, 64953, 65376, 65396, 65565, 65724, 65828, 65928, 65944, 65954, 65977, 65989, 66185, 66208, 66350, 66379, 66413, 66519, 66554, 66580, 66938, 66944, 67032, 67190, 67294, 67570, 67580, 67607, 67635, 67646, 67720, 67766, 67864, 67926, 67995, 68004, 68170, 68616, 68651, 68741, 68865, 120586, 131302, 139116, 146361, 146591, 146662, 146676, 146799, 270704, 270775 | ||
| Synthesized dimer: bDGlcp(1-4')Quercetin Donor (ID 34839): ?DGlcp(1-P-P-5)xXnucU Acceptor (ID 34846): xXQuercetin Status: evidence in vitro
Confirmation methods: in vitro (purified protein), expression in E.coli (as whole-cell biocatalyst) ID: 1643 | Organism (ID 12415): Arabidopsis thaliana Expressed in: E. coli Full structure (ID 30998): CSDB ID(s): 61413, 65566, 65821, 66939, 67765, 67950, 68408, 68428, 68617, 68745 | ||
| Synthesized dimer: DGlcp(1-1)Subst // Subst = 2,4,5-trichlorophenol Donor (ID 34839): ?DGlcp(1-P-P-5)xXnucU Acceptor (ID 34851): Subst // Subst = 2,4,5-trichlorophenol Status: evidence in vitro
Confirmation methods: in vitro (crude extract) ID: 1644 | Organism (ID 12415): Arabidopsis thaliana Full structure (ID 34852): | Brazier-Hicks et al. 2007 DOI: 10.1073/pnas.0706421104 | |
| Synthesized dimer: DGlcp(1-1)Subst // Subst = 3,4-dichloroaniline Donor (ID 34839): ?DGlcp(1-P-P-5)xXnucU Acceptor (ID 34886): Subst // Subst = 3,4-dichloroaniline Status: evidence in vitro
Confirmation methods: in vitro (crude extract) ID: 1645 Notes: Low N-conjugating activity towards 3,4-dichloroaniline | Organism (ID 12415): Arabidopsis thaliana Full structure (ID 34887): | ||
| Synthesized dimer: DGlcp(1-1)Subst // Subst = 4-chlorothiophenol Donor (ID 34839): ?DGlcp(1-P-P-5)xXnucU Acceptor (ID 34855): Subst // Subst = 4-chlorothiophenol Status: evidence in vitro
Confirmation methods: in vitro (crude extract) ID: 1646 Notes: Low S-conjugating activity towards 4-chlorothiophenol | Organism (ID 12415): Arabidopsis thaliana Full structure (ID 34856): | ||
| Enzyme name: 89C1 UniProt ID: Q9LNE6.1 CAZy family: GT1 Gene name: AT1G06000 Gene GenBank ID: 837109 | Synthesized dimer: aLRhap(1-7)Kaempferol Donor (ID 35294): bLRhap(1-P-P-5)xXnucU Acceptor (ID 35295): aLArap(1-3)xXKaempferol Status: evidence in vitro
Confirmation methods: in vitro (purified protein) ID: 1647 | Organism (ID 12415): Arabidopsis thaliana Organ/tissue: leaf, stem, root, flower bud, flower Full structure (ID 27640): CSDB ID(s): 60911 | Yonekura-Sakakibara et al. 2008 DOI: 10.1105/tpc.108.058040 Yonekura-Sakakibara et al. 2007 DOI: 10.1074/jbc.M611498200 |
| Synthesized dimer: aLRhap(1-7)Kaempferol Donor (ID 35148): ?LRhap(1-P-P-5)xXnucU Acceptor (ID 35296): bDGlcp(1-3)xXKaempferol Status: direct evidence in vivo
Confirmation methods: in vitro (purified protein), mutation ID: 1648 Notes: NC: f1. 89C1 takes part in synthesis of ?LRhap(1-3)[aLRhap(1-7)]xXKaempferol (f1), bDGlcp(1-3)aLRhap(1-7)]xXKaempferol (f2) and ?LRhap(1-2)bDGlcp(1-3)[aLRhap(1-7)]xXKaempferol (f3). | Organism (ID 12415): Arabidopsis thaliana Organ/tissue: leaf, stem, root, flower bud, flower Full structure (ID 26063): CSDB ID(s): 60899, 60953, 61901, 62404, 62452, 63334, 65592, 67464, 67711, 139113, 146627 | Yonekura-Sakakibara et al. 2007 DOI: 10.1074/jbc.M611498200 Kuhn et al. 2016 DOI: 10.1074/jbc.M115.701565 | |
| Synthesized dimer: aLRhap(1-7)Kaempferol Donor (ID 35148): ?LRhap(1-P-P-5)xXnucU Status: indirect evidence in vivo
Confirmation methods: mutation ID: 1649 | Organism (ID 12415): Arabidopsis thaliana Organ/tissue: leaf, stem, root, flower bud, flower Full structure (ID 26593): CSDB ID(s): 62450, 146625 | ||
| Synthesized dimer: aLRhap(1-7)Kaempferol Donor (ID 35148): ?LRhap(1-P-P-5)xXnucU Acceptor (ID 35297): ?LRhap(1-6)bDGlcp(1-3)xXKaempferol Status: evidence in vitro
Confirmation methods: in vitro (purified protein) ID: 1650 Notes: NC: f4. | Organism (ID 12415): Arabidopsis thaliana Organ/tissue: leaf, stem, root, flower bud, flower Full structure (ID 35298): | Yonekura-Sakakibara et al. 2007 DOI: 10.1074/jbc.M611498200 | |
| Synthesized dimer: aLRhap(1-7)Quercetin Donor (ID 35148): ?LRhap(1-P-P-5)xXnucU Acceptor (ID 35299): bDGlcp(1-3)xXQuercetin Status: direct evidence in vivo
Confirmation methods: in vitro (purified protein), mutation, expression in E.coli (as whole-cell biocatalyst) ID: 1651 Notes: NC: f6. 89C1 takes part in synthesis of bDGlcp(1-3)[aLRhap(1-7)]xXQuercetin (f6) and ?LRhap(1-2)bDGlcp(1-3)[aLRhap(1-7)]xXQuercetin (f8). | Organism (ID 12415): Arabidopsis thaliana Expressed in: E. coli; leaf, stem, root, flower bud, flower Full structure (ID 26062): CSDB ID(s): 60893, 60903, 60957, 62451, 67468, 67591, 67617, 67738, 67838, 67865, 139112, 146628 | Kim et al. 2013a DOI: 10.1007/s00253-013-4844-7 Yonekura-Sakakibara et al. 2007 DOI: 10.1074/jbc.M611498200 Kuhn et al. 2016 DOI: 10.1074/jbc.M115.701565 Roepke et al. 2013 DOI: 10.1002/cbic.201300474 | |
| Synthesized dimer: aLRhap(1-7)Quercetin Donor (ID 35148): ?LRhap(1-P-P-5)xXnucU Acceptor (ID 35300): ??Galp(1-3)xXQuercetin Status: evidence in vitro
Confirmation methods: in vitro (purified protein) ID: 1652 | Organism (ID 12415): Arabidopsis thaliana Organ/tissue: leaf, stem, root, flower bud, flower Full structure (ID 35301): | Yonekura-Sakakibara et al. 2007 DOI: 10.1074/jbc.M611498200 | |
| Synthesized dimer: aLRhap(1-7)Quercetin Donor (ID 35148): ?LRhap(1-P-P-5)xXnucU Acceptor (ID 35302): aLRhap(1-3)xXQuercetin Status: evidence in vitro
Confirmation methods: in vitro (purified protein) ID: 1653 Notes: NC: f5. | Organism (ID 12415): Arabidopsis thaliana Organ/tissue: leaf, stem, root, flower bud, flower Full structure (ID 26064): CSDB ID(s): 60902, 60956, 62453, 67469, 67741, 139114, 146630 | ||
| Synthesized dimer: aLRhap(1-7)Quercetin Donor (ID 35148): ?LRhap(1-P-P-5)xXnucU Acceptor (ID 35303): ?LRhap(1-6)bDGlcp(1-3)xXQuercetin Status: evidence in vitro
Confirmation methods: in vitro (purified protein) ID: 1654 | Organism (ID 12415): Arabidopsis thaliana Organ/tissue: leaf, stem, root, flower bud, flower Full structure (ID 35304): | ||
| Synthesized dimer: aLRhap(1-7)Subst // Subst = isorhamnetin = SMILES O{3}C1=C(C2=CC={54}C(O)C(OC)=C2)OC3=C({5}C(O)=C{7}C(O)=C3)C1=O Donor (ID 35148): ?LRhap(1-P-P-5)xXnucU Acceptor (ID 35305): bDGlcp(1-3)Subst // Subst = isorhamnetin = SMILES O{3}C1=C(C2=CC={54}C(O)C(OC)=C2)OC3=C({5}C(O)=C{7}C(O)=C3)C1=O Status: direct evidence in vivo
Confirmation methods: in vitro (purified protein), mutation ID: 1655 | Organism (ID 12415): Arabidopsis thaliana Organ/tissue: leaf, stem, root, flower bud, flower Full structure (ID 27635): CSDB ID(s): 60906 | Yonekura-Sakakibara et al. 2007 DOI: 10.1074/jbc.M611498200 Kuhn et al. 2016 DOI: 10.1074/jbc.M115.701565 | |
| Synthesized dimer: aLRhap(1-7)Subst // Subst = isorhamnetin = SMILES O{3}C1=C(C2=CC={54}C(O)C(OC)=C2)OC3=C({5}C(O)=C{7}C(O)=C3)C1=O Donor (ID 35148): ?LRhap(1-P-P-5)xXnucU Acceptor (ID 35306): ?LRhap(1-6)bDGlcp(1-3)Subst // Subst = isorhamnetin = SMILES O{3}C1=C(C2=CC={54}C(O)C(OC)=C2)OC3=C({5}C(O)=C{7}C(O)=C3)C1=O Status: evidence in vitro
Confirmation methods: in vitro (purified protein) ID: 1656 | Organism (ID 12415): Arabidopsis thaliana Organ/tissue: leaf, stem, root, flower bud, flower Full structure (ID 35307): | Yonekura-Sakakibara et al. 2007 DOI: 10.1074/jbc.M611498200 | |
| Synthesized dimer: aLRhap(1-7)Apigenin Donor (ID 35148): ?LRhap(1-P-P-5)xXnucU Acceptor (ID 34958): xXApigenin Status: evidence in vitro
Confirmation methods: expression in E.coli (as whole-cell biocatalyst) ID: 1657 Notes: 89C1 demonstrates this activity when coexpressed with UDP-L-rhamnose synthase AtRHM1, which catalyzes the synthesis of UDP-L-rhamnose from UDP-D-glucose; presumably, 89C1 can use pools of both TDP-L-rhamnose and UDP-L-rhamnose present in such recombinant bacteria. | Organism (ID 12415): Arabidopsis thaliana Expressed in: E. coli; leaf, stem, root, flower bud, flower Full structure (ID 21526): CSDB ID(s): 49662 | Yonekura-Sakakibara et al. 2007 DOI: 10.1074/jbc.M611498200 Parajuli et al. 2015 DOI: 10.1016/j.carres.2015.09.010 | |
| Synthesized dimer: aLRhap(1-7)Apigenin Donor (ID 35217): ?LRhap(1-P-P-5)xXnucT Acceptor (ID 34958): xXApigenin Status: evidence in vitro
Confirmation methods: expression in E.coli (as whole-cell biocatalyst) ID: 1658 | Organism (ID 12415): Arabidopsis thaliana Expressed in: E. coli; leaf, stem, root, flower bud, flower Full structure (ID 21526): CSDB ID(s): 49662 | ||
| Synthesized dimer: aLRhap(1-7)Subst // Subst = chrysin = SMILES O=C1C=C(OC2=C1{5}C(O)=C{7}C(O)=C2)C3=CC=CC=C3 Donor (ID 35148): ?LRhap(1-P-P-5)xXnucU Acceptor (ID 35028): Subst // Subst = chrysin = SMILES O=C1C=C(OC2=C1{5}C(O)=C{7}C(O)=C2)C3=CC=CC=C3 Status: evidence in vitro
Confirmation methods: expression in E.coli (as whole-cell biocatalyst) ID: 1659 Notes: 89C1 demonstrates this activity when coexpressed with UDP-L-rhamnose synthase AtRHM1, which catalyzes the synthesis of UDP-L-rhamnose from UDP-D-glucose; presumably, 89C1 can use pools of both TDP-L-rhamnose and UDP-L-rhamnose present in such recombinant bacteria. | Organism (ID 12415): Arabidopsis thaliana Expressed in: E. coli; leaf, stem, root, flower bud, flower Full structure (ID 35308): | ||
| Synthesized dimer: aLRhap(1-7)Subst // Subst = chrysin = SMILES O=C1C=C(OC2=C1{5}C(O)=C{7}C(O)=C2)C3=CC=CC=C3 Donor (ID 35217): ?LRhap(1-P-P-5)xXnucT Acceptor (ID 35028): Subst // Subst = chrysin = SMILES O=C1C=C(OC2=C1{5}C(O)=C{7}C(O)=C2)C3=CC=CC=C3 Status: evidence in vitro
Confirmation methods: expression in E.coli (as whole-cell biocatalyst) ID: 1660 | Organism (ID 12415): Arabidopsis thaliana Expressed in: E. coli; leaf, stem, root, flower bud, flower Full structure (ID 35308): | ||
| Synthesized dimer: aLRhap(1-7)Luteolin Donor (ID 35148): ?LRhap(1-P-P-5)xXnucU Acceptor (ID 34871): xXLuteolin Status: evidence in vitro
Confirmation methods: expression in E.coli (as whole-cell biocatalyst) ID: 1661 Notes: 89C1 demonstrates this activity when coexpressed with UDP-L-rhamnose synthase AtRHM1, which catalyzes the synthesis of UDP-L-rhamnose from UDP-D-glucose; presumably, 89C1 can use pools of both TDP-L-rhamnose and UDP-L-rhamnose present in such recombinant bacteria. | Organism (ID 12415): Arabidopsis thaliana Expressed in: E. coli; leaf, stem, root, flower bud, flower Full structure (ID 35309): | ||
| Synthesized dimer: aLRhap(1-7)Luteolin Donor (ID 35217): ?LRhap(1-P-P-5)xXnucT Acceptor (ID 34871): xXLuteolin Status: evidence in vitro
Confirmation methods: expression in E.coli (as whole-cell biocatalyst) ID: 1662 | Organism (ID 12415): Arabidopsis thaliana Expressed in: E. coli; leaf, stem, root, flower bud, flower Full structure (ID 35309): | ||
| Synthesized dimer: aLRhap(1-7)Subst // Subst = 7,8-dihydroxyflavone Donor (ID 35148): ?LRhap(1-P-P-5)xXnucU Acceptor (ID 35310): Subst // Subst = 7,8-dihydroxyflavone Status: evidence in vitro
Confirmation methods: expression in E.coli (as whole-cell biocatalyst) ID: 1663 Notes: 89C1 demonstrates this activity when coexpressed with UDP-L-rhamnose synthase AtRHM1, which catalyzes the synthesis of UDP-L-rhamnose from UDP-D-glucose; presumably, 89C1 can use pools of both TDP-L-rhamnose and UDP-L-rhamnose present in such recombinant bacteria. | Organism (ID 12415): Arabidopsis thaliana Expressed in: E. coli; leaf, stem, root, flower bud, flower Full structure (ID 35311): | ||
| Synthesized dimer: aLRhap(1-7)Subst // Subst = 7,8-dihydroxyflavone Donor (ID 35217): ?LRhap(1-P-P-5)xXnucT Acceptor (ID 35310): Subst // Subst = 7,8-dihydroxyflavone Status: evidence in vitro
Confirmation methods: expression in E.coli (as whole-cell biocatalyst) ID: 1664 | Organism (ID 12415): Arabidopsis thaliana Expressed in: E. coli; leaf, stem, root, flower bud, flower Full structure (ID 35311): | ||
| Synthesized dimer: aLRhap(1-7)Quercetin Donor (ID 35294): bLRhap(1-P-P-5)xXnucU Acceptor (ID 34846): xXQuercetin Status: evidence in vitro
Confirmation methods: expression in E.coli (as whole-cell biocatalyst); in vitro (purified protein); im vitro (mutation) ID: 1665 Notes: When coexpressed with UDP-L-rhamnose synthase AtRHM1, which catalyzes the synthesis of UDP-L-rhamnose from UDP-D-glucose; presumably, 89C1 can use pools of both TDP-L-rhamnose and UDP-L-rhamnose present in such recombinant bacteria. | Organism (ID 12415): Arabidopsis thaliana Expressed in: E. coli; leaf, stem, root, flower bud, flower Full structure (ID 35312): | Zong et al. 2019b DOI: 10.1111/tpj.14321 Yonekura-Sakakibara et al. 2007 DOI: 10.1074/jbc.M611498200 Parajuli et al. 2015 DOI: 10.1016/j.carres.2015.09.010 Thapa et al. 2019 DOI: 10.1007/s00253-019-10060-5 | |
| Synthesized dimer: aLRhap(1-7)Quercetin Donor (ID 35217): ?LRhap(1-P-P-5)xXnucT Acceptor (ID 34846): xXQuercetin Status: evidence in vitro
Confirmation methods: expression in E.coli (as whole-cell biocatalyst) ID: 1666 | Organism (ID 12415): Arabidopsis thaliana Expressed in: E. coli; leaf, stem, root, flower bud, flower Full structure (ID 35312): | Yonekura-Sakakibara et al. 2007 DOI: 10.1074/jbc.M611498200 Parajuli et al. 2015 DOI: 10.1016/j.carres.2015.09.010 | |
| Synthesized dimer: aLRhap(1-7)Myricetin Donor (ID 35148): ?LRhap(1-P-P-5)xXnucU Acceptor (ID 35165): xXMyricetin Status: evidence in vitro
Confirmation methods: expression in E.coli (as whole-cell biocatalyst) ID: 1667 Notes: 89C1 demonstrates this activity when coexpressed with UDP-L-rhamnose synthase AtRHM1, which catalyzes the synthesis of UDP-L-rhamnose from UDP-D-glucose; presumably, 89C1 can use pools of both TDP-L-rhamnose and UDP-L-rhamnose present in such recombinant bacteria. | Organism (ID 12415): Arabidopsis thaliana Expressed in: E. coli; leaf, stem, root, flower bud, flower Full structure (ID 35313): | ||
| Synthesized dimer: aLRhap(1-7)Myricetin Donor (ID 35217): ?LRhap(1-P-P-5)xXnucT Acceptor (ID 35165): xXMyricetin Status: evidence in vitro
Confirmation methods: expression in E.coli (as whole-cell biocatalyst) ID: 1668 | Organism (ID 12415): Arabidopsis thaliana Expressed in: E. coli; leaf, stem, root, flower bud, flower Full structure (ID 35313): | ||
| Synthesized dimer: aLRhap(1-7)Subst // Subst = morin = SMILES O=C1{3}C(O)=C(OC2=C1{5}C(O)=C{7}C(O)=C2)C3={52}C(O)C={54}C(O)C=C3 Donor (ID 35148): ?LRhap(1-P-P-5)xXnucU Acceptor (ID 35314): Subst // Subst = morin = SMILES O=C1{3}C(O)=C(OC2=C1{5}C(O)=C{7}C(O)=C2)C3={52}C(O)C={54}C(O)C=C3 Status: evidence in vitro
Confirmation methods: expression in E.coli (as whole-cell biocatalyst) ID: 1669 Notes: 89C1 demonstrates this activity when coexpressed with UDP-L-rhamnose synthase AtRHM1, which catalyzes the synthesis of UDP-L-rhamnose from UDP-D-glucose; presumably, 89C1 can use pools of both TDP-L-rhamnose and UDP-L-rhamnose present in such recombinant bacteria. | Organism (ID 12415): Arabidopsis thaliana Expressed in: E. coli; leaf, stem, root, flower bud, flower Full structure (ID 35315): | ||
| Synthesized dimer: aLRhap(1-7)Subst // Subst = morin = SMILES O=C1{3}C(O)=C(OC2=C1{5}C(O)=C{7}C(O)=C2)C3={52}C(O)C={54}C(O)C=C3 Donor (ID 35217): ?LRhap(1-P-P-5)xXnucT Acceptor (ID 35314): Subst // Subst = morin = SMILES O=C1{3}C(O)=C(OC2=C1{5}C(O)=C{7}C(O)=C2)C3={52}C(O)C={54}C(O)C=C3 Status: evidence in vitro
Confirmation methods: expression in E.coli (as whole-cell biocatalyst) ID: 1670 | Organism (ID 12415): Arabidopsis thaliana Expressed in: E. coli; leaf, stem, root, flower bud, flower Full structure (ID 35315): | ||
| Synthesized dimer: aLRhap(1-7)Subst // Subst = hesperetin = SMILES O=C(C1=C(O/2)C={7}C(O)C={5}C1O)CC2=C3C={54}C(C(OC)=CC/3)O Donor (ID 35148): ?LRhap(1-P-P-5)xXnucU Acceptor (ID 34976): Subst // Subst = hesperetin = SMILES O=C(C1=C(O/2)C={7}C(O)C={5}C1O)CC2=C3C={54}C(C(OC)=CC/3)O Status: evidence in vitro
Confirmation methods: expression in E.coli (as whole-cell biocatalyst) ID: 1671 Notes: 89C1 demonstrates this activity when coexpressed with UDP-L-rhamnose synthase AtRHM1, which catalyzes the synthesis of UDP-L-rhamnose from UDP-D-glucose; presumably, 89C1 can use pools of both TDP-L-rhamnose and UDP-L-rhamnose present in such recombinant bacteria. | Organism (ID 12415): Arabidopsis thaliana Expressed in: E. coli; leaf, stem, root, flower bud, flower Full structure (ID 35316): | ||
| Synthesized dimer: aLRhap(1-7)Subst // Subst = hesperetin = SMILES O=C(C1=C(O/2)C={7}C(O)C={5}C1O)CC2=C3C={54}C(C(OC)=CC/3)O Donor (ID 35217): ?LRhap(1-P-P-5)xXnucT Acceptor (ID 34976): Subst // Subst = hesperetin = SMILES O=C(C1=C(O/2)C={7}C(O)C={5}C1O)CC2=C3C={54}C(C(OC)=CC/3)O Status: evidence in vitro
Confirmation methods: expression in E.coli (as whole-cell biocatalyst) ID: 1672 | Organism (ID 12415): Arabidopsis thaliana Expressed in: E. coli; leaf, stem, root, flower bud, flower Full structure (ID 35316): | ||
| Synthesized dimer: aLRhap(1-7)Subst // Subst = naringenin = SMILES O=C1CC(C2=CC={54}C(O)C=C2)OC3=C{7}C(O)={6}C{5}C(O)=C13 Donor (ID 35148): ?LRhap(1-P-P-5)xXnucU Acceptor (ID 34954): Subst // Subst = naringenin = SMILES O=C1CC(C2=CC={54}C(O)C=C2)OC3=C{7}C(O)={6}C{5}C(O)=C13 Status: evidence in vitro
Confirmation methods: expression in E.coli (as whole-cell biocatalyst) ID: 1673 Notes: 89C1 demonstrates this activity when coexpressed with UDP-L-rhamnose synthase AtRHM1, which catalyzes the synthesis of UDP-L-rhamnose from UDP-D-glucose; presumably, 89C1 can use pools of both TDP-L-rhamnose and UDP-L-rhamnose present in such recombinant bacteria. | Organism (ID 12415): Arabidopsis thaliana Expressed in: E. coli; leaf, stem, root, flower bud, flower Full structure (ID 35317): | ||
| Synthesized dimer: aLRhap(1-7)Subst // Subst = naringenin = SMILES O=C1CC(C2=CC={54}C(O)C=C2)OC3=C{7}C(O)={6}C{5}C(O)=C13 Donor (ID 35217): ?LRhap(1-P-P-5)xXnucT Acceptor (ID 34954): Subst // Subst = naringenin = SMILES O=C1CC(C2=CC={54}C(O)C=C2)OC3=C{7}C(O)={6}C{5}C(O)=C13 Status: evidence in vitro
Confirmation methods: expression in E.coli (as whole-cell biocatalyst) ID: 1674 | Organism (ID 12415): Arabidopsis thaliana Expressed in: E. coli; leaf, stem, root, flower bud, flower Full structure (ID 35317): | ||
| Synthesized dimer: bDGlcp(1-7)Subst // Subst = genistein = SMILES O=C1C(C2=CC={54}C(O)C=C2)=COC3=C1{5}C(O)={6}C{7}C(O)={8}C3 Donor (ID 34898): aDGlcp(1-P-P-5)xXnucU Acceptor (ID 34978): Subst // Subst = genistein = SMILES O=C1C(C2=CC={54}C(O)C=C2)=COC3=C1{5}C(O)={6}C{7}C(O)={8}C3 Status: evidence in vitro
Confirmation methods: in vitro (crude extract) ID: 1675 | Organism (ID 12415): Arabidopsis thaliana Organ/tissue: leaf, stem, root, flower bud, flower Full structure (ID 21010): CSDB ID(s): 48950, 62479, 65720, 66536, 67769, 67929, 68032, 139650 | Yonekura-Sakakibara et al. 2007 DOI: 10.1074/jbc.M611498200 Parajuli et al. 2016 DOI: 10.1080/07328303.2016.1251941 | |
| Synthesized dimer: bDGlcp(1-4')Subst // Subst = genistein = SMILES O=C1C(C2=CC={54}C(O)C=C2)=COC3=C1{5}C(O)={6}C{7}C(O)={8}C3 Donor (ID 34898): aDGlcp(1-P-P-5)xXnucU Acceptor (ID 35318): bDGlcp(1-7)Subst // Subst = genistein = SMILES O=C1C(C2=CC={54}C(O)C=C2)=COC3=C1{5}C(O)={6}C{7}C(O)={8}C3 Status: evidence in vitro
Confirmation methods: in vitro (crude extract) ID: 1676 | Organism (ID 12415): Arabidopsis thaliana Organ/tissue: leaf, stem, root, flower bud, flower Full structure (ID 31231): CSDB ID(s): 65940 | Parajuli et al. 2016 DOI: 10.1080/07328303.2016.1251941 | |
| Synthesized dimer: bDGalp(1-7)Subst // Subst = genistein = SMILES O=C1C(C2=CC={54}C(O)C=C2)=COC3=C1{5}C(O)={6}C{7}C(O)={8}C3 Donor (ID 35039): aDGalp(1-P-P-5)xXnucU Acceptor (ID 34978): Subst // Subst = genistein = SMILES O=C1C(C2=CC={54}C(O)C=C2)=COC3=C1{5}C(O)={6}C{7}C(O)={8}C3 Status: evidence in vitro
Confirmation methods: in vitro (crude extract) ID: 1677 | Organism (ID 12415): Arabidopsis thaliana Organ/tissue: leaf, stem, root, flower bud, flower Full structure (ID 35319): | ||
| Synthesized dimer: bD2daraHexp(1-7)Subst // Subst = genistein = SMILES O=C1C(C2=CC={54}C(O)C=C2)=COC3=C1{5}C(O)={6}C{7}C(O)={8}C3 Donor (ID 35320): aD2daraHexp(1-P-P-5)xXnucdT Acceptor (ID 34978): Subst // Subst = genistein = SMILES O=C1C(C2=CC={54}C(O)C=C2)=COC3=C1{5}C(O)={6}C{7}C(O)={8}C3 Status: evidence in vitro
Confirmation methods: in vitro (crude extract) ID: 1678 | Organism (ID 12415): Arabidopsis thaliana Organ/tissue: leaf, stem, root, flower bud, flower Full structure (ID 35321): | ||
| Synthesized dimer: aLRhap(1-7)Subst // Subst = genistein = SMILES O=C1C(C2=CC={54}C(O)C=C2)=COC3=C1{5}C(O)={6}C{7}C(O)={8}C3 Donor (ID 35322): bLRhap(1-P-P-5)xXnucT Acceptor (ID 34978): Subst // Subst = genistein = SMILES O=C1C(C2=CC={54}C(O)C=C2)=COC3=C1{5}C(O)={6}C{7}C(O)={8}C3 Status: evidence in vitro
Confirmation methods: in vitro (crude extract) ID: 1679 | Organism (ID 12415): Arabidopsis thaliana Organ/tissue: leaf, stem, root, flower bud, flower Full structure (ID 35323): | ||
| Synthesized dimer: aLFucp(1-7)Subst // Subst = genistein = SMILES O=C1C(C2=CC={54}C(O)C=C2)=COC3=C1{5}C(O)={6}C{7}C(O)={8}C3 Donor (ID 35324): bLFucp(1-P-P-5)xXnucG Acceptor (ID 34978): Subst // Subst = genistein = SMILES O=C1C(C2=CC={54}C(O)C=C2)=COC3=C1{5}C(O)={6}C{7}C(O)={8}C3 Status: evidence in vitro
Confirmation methods: in vitro (crude extract) ID: 1680 | Organism (ID 12415): Arabidopsis thaliana Organ/tissue: leaf, stem, root, flower bud, flower Full structure (ID 35325): | ||
| Enzyme name: 90A4 Gene name: UGT90A4 / AT5G14860 Gene GenBank ID: 831338 | Synthesized dimer: DGlcp(1-1)Subst // Subst = 2,4,5-trichlorophenol Donor (ID 34839): ?DGlcp(1-P-P-5)xXnucU Acceptor (ID 34851): Subst // Subst = 2,4,5-trichlorophenol Status: evidence in vitro
Confirmation methods: in vitro (crude extract) ID: 1681 | Organism (ID 12415): Arabidopsis thaliana Full structure (ID 34852): | Brazier-Hicks et al. 2007 DOI: 10.1073/pnas.0706421104 |
| Synthesized dimer: DGlcp(1-1)Subst // Subst = 3,4-dichloroaniline Donor (ID 34839): ?DGlcp(1-P-P-5)xXnucU Acceptor (ID 34886): Subst // Subst = 3,4-dichloroaniline Status: evidence in vitro
Confirmation methods: in vitro (crude extract) ID: 1682 Notes: Low N-conjugating activity towards 3,4-dichloroaniline | Organism (ID 12415): Arabidopsis thaliana Full structure (ID 34887): | ||
| Synthesized dimer: DGlcp(1-1)Subst // Subst = 4-chlorothiophenol Donor (ID 34839): ?DGlcp(1-P-P-5)xXnucU Acceptor (ID 34855): Subst // Subst = 4-chlorothiophenol Status: evidence in vitro
Confirmation methods: in vitro (crude extract) ID: 1683 Notes: S-conjugating activity towards 4-chlorothiophenol | Organism (ID 12415): Arabidopsis thaliana Full structure (ID 34856): | ||
| Enzyme name: ALG3 UniProt ID: O82244.1 CAZy family: GT58 Gene name: ALG3 / AT2G47760 Gene GenBank ID: 819388 | Synthesized dimer: aManp(1-3)aManp Donor (ID 35326): ??Manp(1-P-1)Subst // Subst = dolichol Acceptor (ID 35327): a?Manp(1-2)a?Manp(1-2)a?Manp(1-3)[a?Manp(1-6)]b?Manp(1-4)[Ac(1-2)]bDGlcpN(1-4)[Ac(1-2)]bDGlcpN(1-P-P-1)Subst // Subst = dolichol Status: indirect evidence in vivo
Confirmation methods: mutation, complementation, overexpression in yeast ID: 1684 Notes: Suggested activity in planta. The function is supposed in accordance with homology with yeast. | Organism (ID 12415): Arabidopsis thaliana Organ/tissue: S.cerevisiae Full structure (ID 27691): CSDB ID(s): 60992 | Kajiura et al. 2010 DOI: 10.1093/glycob/cwq028 Henquet et al. 2008 DOI: 10.1105/tpc.108.060731 Aebi 2014 DOI: 10.1007/978-4-431-54240-7_1 Yoo et al. 2015 DOI: 10.1074/jbc.M115.653162 Trempel et al. 2016 DOI: 10.1186/s12870-016-0718-3 |
| Enzyme name: ALG10 UniProt ID: Q8L638.1 CAZy family: GT59 Gene name: At5g02410 Gene GenBank ID: 831764 | Synthesized dimer: aDGlcp(1-2)aDGlcp Donor (ID 35328): ?DGlcp(1-P-1)Subst // Subst = dolichol Acceptor (ID 35329): aDGlcp(1-3)aDGlcp(1-3)a?Manp(1-2)a?Manp(1-2)a?Manp(1-3)[a?Manp(1-2)a?Manp(1-3)[a?Manp(1-2)a?Manp(1-6)]a?Manp(1-6)]b?Manp(1-4)[Ac(1-2)]bDGlcpN(1-4)[Ac(1-2)]bDGlcpN(1-P-P-1)Subst // Subst = dolichol Status: indirect evidence in vivo
Confirmation methods: mutation, complementation ID: 1685 Notes: The function is supposed in accordance with homology with yeast. | Organism (ID 12415): Arabidopsis thaliana Organ/tissue: root, stem, leaf Full structure (ID 27703): CSDB ID(s): 61004 | Aebi 2014 DOI: 10.1007/978-4-431-54240-7_1 Farid et al. 2011 DOI: 10.1111/j.1365-313X.2011.04688.x |
| Enzyme name: ALG11 UniProt ID: Q9XEE9.2 CAZy family: GT4 Gene name: LEW3 / AT2G40190 Gene GenBank ID: 818610 | Synthesized dimer: aManp(1-2)aManp Donor (ID 35326): ??Manp(1-P-1)Subst // Subst = dolichol Acceptor (ID 35330): a?Manp(1-3)[a?Manp(1-6)]b?Manp(1-4)[Ac(1-2)]bDGlcpN(1-4)[Ac(1-2)]bDGlcpN(1-P-P-1)Subst // Subst = dolichol Status: indirect evidence in vivo
Confirmation methods: mutation ID: 1686 Notes: The function is supposed in accordance with homology with yeast. | Organism (ID 12415): Arabidopsis thaliana Organ/tissue: shoot, leaf, stem, silique, root, flower Full structure (ID 35331): | Aebi 2014 DOI: 10.1007/978-4-431-54240-7_1 Zhang et al. 2009 DOI: 10.1111/j.1365-313X.2009.04013.x |
| Enzyme name: ALG12 UniProt ID: A8MR93.1 CAZy family: GT22 Gene name: ALG12 / AT1G02145 Gene GenBank ID: 5007658 | Synthesized dimer: aManp(1-6)aManp Donor (ID 35326): ??Manp(1-P-1)Subst // Subst = dolichol Acceptor (ID 35332): a?Manp(1-2)a?Manp(1-2)a?Manp(1-3)[a?Manp(1-2)a?Manp(1-3)a?Manp(1-6)]b?Manp(1-4)[Ac(1-2)]bDGlcpN(1-4)[Ac(1-2)]bDGlcpN(1-P-P-1)Subst // Subst = dolichol Status: indirect evidence in vivo
Confirmation methods: mutation, complementation ID: 1687 Notes: The function is supposed in accordance with homology with yeast. | Organism (ID 12415): Arabidopsis thaliana Full structure (ID 35333): | Aebi 2014 DOI: 10.1007/978-4-431-54240-7_1 Hong et al. 2009 DOI: 10.1105/tpc.109.070284 |
| Enzyme name: AtGlcAT14A UniProt ID: Q9FLD7.1 CAZy family: GT14 Gene name: AT5G39990 Gene GenBank ID: 833996 | Synthesized dimer: bGlcpA(1-6)bGalp Donor (ID 35334): ??GlcpA(1-P-P-5)xXnucU Acceptor (ID 35335): b?Galp(1-6)b?Galp(1-6)b?Galp Status: evidence in vitro
Confirmation methods: in vitro (purified protein), mutation ID: 1688 Notes: AtGlcAT14A is probably responsible for adding GlcpA to both the beta-1,6-galactan side chain and the beta-1,3-galactan main chain of type II arabinogalactans. | Organism (ID 12415): Arabidopsis thaliana Organ/tissue: root, shoot Full structure (ID 35336): | Knoch et al. 2013 DOI: 10.1111/tpj.12353 |
| Synthesized dimer: bGlcpA(1-6)bGalp Donor (ID 35334): ??GlcpA(1-P-P-5)xXnucU Acceptor (ID 35337): b?Galp(1-6)b?Galp(1-6)b?Galp(1-6)b?Galp Status: evidence in vitro
Confirmation methods: in vitro (purified protein), mutation ID: 1689 Notes: AtGlcAT14A is probably responsible for adding GlcpA to both the beta-1,6-galactan side chain and the beta-1,3-galactan main chain of type II arabinogalactans. | Organism (ID 12415): Arabidopsis thaliana Organ/tissue: root, shoot Full structure (ID 35338): | ||
| Synthesized dimer: bGlcpA(1-6)bGalp Donor (ID 35334): ??GlcpA(1-P-P-5)xXnucU Acceptor (ID 35339): b?Galp(1-6)b?Galp(1-6)b?Galp(1-6)b?Galp(1-6)b?Galp Status: evidence in vitro
Confirmation methods: in vitro (purified protein), mutation ID: 1690 Notes: AtGlcAT14A is probably responsible for adding GlcpA to both the beta-1,6-galactan side chain and the beta-1,3-galactan main chain of type II arabinogalactans. | Organism (ID 12415): Arabidopsis thaliana Organ/tissue: root, shoot Full structure (ID 35340): | ||
| Synthesized dimer: bGlcpA(1-6)bGalp Donor (ID 35334): ??GlcpA(1-P-P-5)xXnucU Acceptor (ID 35341): b?Galp(1-6)b?Galp(1-6)b?Galp(1-6)b?Galp(1-6)b?Galp(1-6)b?Galp Status: evidence in vitro
Confirmation methods: in vitro (purified protein), mutation ID: 1691 Notes: AtGlcAT14A is probably responsible for adding GlcpA to both the beta-1,6-galactan side chain and the beta-1,3-galactan main chain of type II arabinogalactans. | Organism (ID 12415): Arabidopsis thaliana Organ/tissue: root, shoot Full structure (ID 35342): | ||
| Synthesized dimer: bGlcpA(1-6)bGalp Donor (ID 35334): ??GlcpA(1-P-P-5)xXnucU Acceptor (ID 35343): b?Galp(1-6)b?Galp(1-6)b?Galp(1-6)b?Galp(1-6)b?Galp(1-6)b?Galp(1-6)b?Galp Status: evidence in vitro
Confirmation methods: in vitro (purified protein), mutation ID: 1692 Notes: AtGlcAT14A is probably responsible for adding GlcpA to both the beta-1,6-galactan side chain and the beta-1,3-galactan main chain of type II arabinogalactans. | Organism (ID 12415): Arabidopsis thaliana Organ/tissue: root, shoot Full structure (ID 35344): | ||
| Synthesized dimer: bGlcpA(1-6)bGalp Donor (ID 35334): ??GlcpA(1-P-P-5)xXnucU Acceptor (ID 35345): b?Galp(1-6)b?Galp(1-6)b?Galp(1-6)b?Galp(1-6)b?Galp(1-6)b?Galp(1-6)b?Galp(1-6)b?Galp Status: evidence in vitro
Confirmation methods: in vitro (purified protein), mutation ID: 1693 Notes: AtGlcAT14A is probably responsible for adding GlcpA to both the beta-1,6-galactan side chain and the beta-1,3-galactan main chain of type II arabinogalactans. | Organism (ID 12415): Arabidopsis thaliana Organ/tissue: root, shoot Full structure (ID 35346): | ||
| Synthesized dimer: bGlcpA(1-6)bGalp Donor (ID 35334): ??GlcpA(1-P-P-5)xXnucU Acceptor (ID 35347): b?Galp(1-6)b?Galp(1-6)b?Galp(1-6)b?Galp(1-6)b?Galp(1-6)b?Galp(1-6)b?Galp(1-6)b?Galp(1-6)b?Galp Status: evidence in vitro
Confirmation methods: in vitro (purified protein), mutation ID: 1694 Notes: AtGlcAT14A is probably responsible for adding GlcpA to both the beta-1,6-galactan side chain and the beta-1,3-galactan main chain of type II arabinogalactans. | Organism (ID 12415): Arabidopsis thaliana Organ/tissue: root, shoot Full structure (ID 35348): | ||
| Synthesized dimer: bGlcpA(1-6)bGalp Donor (ID 35334): ??GlcpA(1-P-P-5)xXnucU Acceptor (ID 35349): b?Galp(1-6)b?Galp(1-6)b?Galp(1-6)b?Galp(1-6)b?Galp(1-6)b?Galp(1-6)b?Galp(1-6)b?Galp(1-6)b?Galp(1-6)b?Galp Status: evidence in vitro
Confirmation methods: in vitro (purified protein), mutation ID: 1695 Notes: AtGlcAT14A is probably responsible for adding GlcpA to both the beta-1,6-galactan side chain and the beta-1,3-galactan main chain of type II arabinogalactans. | Organism (ID 12415): Arabidopsis thaliana Organ/tissue: root, shoot Full structure (ID 35350): | ||
| Synthesized dimer: bGlcpA(1-6)bGalp Donor (ID 35334): ??GlcpA(1-P-P-5)xXnucU Acceptor (ID 35351): b?Galp(1-6)b?Galp(1-6)b?Galp(1-6)b?Galp(1-6)b?Galp(1-6)b?Galp(1-6)b?Galp(1-6)b?Galp(1-6)b?Galp(1-6)b?Galp(1-6)b?Galp Status: evidence in vitro
Confirmation methods: in vitro (purified protein), mutation ID: 1696 Notes: AtGlcAT14A is probably responsible for adding GlcpA to both the beta-1,6-galactan side chain and the beta-1,3-galactan main chain of type II arabinogalactans. | Organism (ID 12415): Arabidopsis thaliana Organ/tissue: root, shoot Full structure (ID 35352): | ||
| Synthesized dimer: bGlcpA(1-6)bGalp Donor (ID 35334): ??GlcpA(1-P-P-5)xXnucU Acceptor (ID 35353): b?Galp(1-3)b?Galp(1-3)b?Galp(1-3)b?Galp(1-3)b?Galp Status: evidence in vitro
Confirmation methods: in vitro (purified protein), mutation ID: 1697 Notes: AtGlcAT14A transfers GlcpA at C6 of bGalp at an unknown position in the oligomer. AtGlcAT14A is probably responsible for adding GlcpA to both the beta-1,6-galactan side chain and the beta-1,3-galactan main chain of type II arabinogalactans. | Organism (ID 12415): Arabidopsis thaliana Organ/tissue: root, shoot Full structure (ID 35354): | ||
| Synthesized dimer: bGlcpA(1-6)bGalp Donor (ID 35334): ??GlcpA(1-P-P-5)xXnucU Acceptor (ID 35355): b?Galp(1-3)b?Galp(1-3)b?Galp(1-3)b?Galp(1-3)b?Galp(1-3)b?Galp(1-3)b?Galp Status: evidence in vitro
Confirmation methods: in vitro (purified protein), mutation ID: 1698 Notes: AtGlcAT14A transfers GlcpA at C6 of bGalp at an unknown position in the oligomer. AtGlcAT14A is probably responsible for adding GlcpA to both the beta-1,6-galactan side chain and the beta-1,3-galactan main chain of type II arabinogalactans. | Organism (ID 12415): Arabidopsis thaliana Organ/tissue: root, shoot Full structure (ID 35356): | ||
| Enzyme name: AtCSLC4 UniProt ID: Q9LJP4.1 CAZy family: GT2 Gene name: AT3G28180 Gene GenBank ID: 822444 | Synthesized dimer: bDGlcp(1-4)bDGlcp Donor (ID 34839): ?DGlcp(1-P-P-5)xXnucU Acceptor (ID 35357): -4)bDGlcp(1- Status: evidence in vitro
Confirmation methods: expression in P. pastoris (as whole-cell catalyst) ID: 1699 | Organism (ID 12415): Arabidopsis thaliana Expressed in: P. pastoris Full structure (ID 6645): CSDB ID(s): 2269, 7324, 11828, 20138, 40042, 42366, 43170, 46287, 46400, 46514, 48375, 48772, 49242, 50616, 60777, 60778, 60779, 60782, 63451, 63758, 66437, 111739, 112991, 113055, 114598, 130741, 145248, 145281, 146832, 146880, 146881, 146882, 146887, 146889, 147002, 147010, 147015, 147016, 147079, 147094, 147097, 147103, 147153, 147174, 147176 | Cocuron et al. 2007 DOI: 10.1073_pnas.0703133104 Chou et al. 2015 DOI: 10.1093/pcp/pcu161 |
| Enzyme name: XXT1 UniProt ID: Q9LZJ3.1 CAZy family: GT34 Gene name: AtXT1 / AT3G62720 Gene GenBank ID: 825446 | Synthesized dimer: aDXylp(1-6)bDGlcp Donor (ID 35290): ?DXylp(1-P-P-5)xXnucU Acceptor (ID 35358): bDGlcp(1-4)bDGlcp(1-4)bDGlcp(1-4)bDGlcp(1-4)bDGlcp Status: evidence in vitro
Confirmation methods: in vitro (crude extract) ID: 1700 Notes: The xxt1 xxt2 double mutant lacked detectable xyloglucan. | Organism (ID 12415): Arabidopsis thaliana Organ/tissue: stem, leaf, root, flower, bud Full structure (ID 35359): | Faik et al. 2002 DOI: 10.1073_pnas.102644799 Cavalier et al. 2006 DOI: 10.1074/jbc.M606379200 Cavalier et al. 2008 DOI: 10.1105/tpc.108.059873 Faure et al. 2007 DOI: 10.1002/ejoc.200700395 Vuttipongchaikij et al. 2012 DOI: 10.1111/j.1469-8137.2012.04196.x |
| Synthesized dimer: aDXylp(1-6)bDGlcp Donor (ID 35290): ?DXylp(1-P-P-5)xXnucU Acceptor (ID 35360): bDGlcp(1-4)bDGlcp(1-4)bDGlcp(1-4)bDGlcp Status: evidence in vitro
Confirmation methods: in vitro (crude extract) ID: 1701 Notes: The xxt1 xxt2 double mutant lacked detectable xyloglucan. | Organism (ID 12415): Arabidopsis thaliana Organ/tissue: stem, leaf, root, flower, bud Full structure (ID 35361): | Faik et al. 2002 DOI: 10.1073_pnas.102644799 Cavalier et al. 2006 DOI: 10.1074/jbc.M606379200 Cavalier et al. 2008 DOI: 10.1105/tpc.108.059873 Vuttipongchaikij et al. 2012 DOI: 10.1111/j.1469-8137.2012.04196.x | |
| Synthesized dimer: aDXylp(1-6)bDGlcp Donor (ID 35290): ?DXylp(1-P-P-5)xXnucU Acceptor (ID 35362): bDGlcp(1-4)bDGlcp(1-4)bDGlcp(1-4)bDGlcp(1-4)bDGlcp(1-4)bDGlcp Status: evidence in vitro
Confirmation methods: in vitro (crude extract), in vitro (purified protein) ID: 1702 Notes: The xxt1 xxt2 double mutant lacked detectable xyloglucan. | Organism (ID 12415): Arabidopsis thaliana Organ/tissue: stem, leaf, root, flower, bud Full structure (ID 35363): | Cavalier et al. 2006 DOI: 10.1074/jbc.M606379200 Cavalier et al. 2008 DOI: 10.1105/tpc.108.059873 Faure et al. 2007 DOI: 10.1002/ejoc.200700395 Vuttipongchaikij et al. 2012 DOI: 10.1111/j.1469-8137.2012.04196.x Culbertson et al. 2016a DOI: 10.1104/pp.16.00361 | |
| Synthesized dimer: aDXylp(1-6)bDGlcp Donor (ID 35290): ?DXylp(1-P-P-5)xXnucU Acceptor (ID 35364): bDGlcp(1-4)bDGlcp(1-4)[aDXylp(1-6)]bDGlcp(1-4)bDGlcp(1-4)bDGlcp(1-4)bDGlcp Status: evidence in vitro
Confirmation methods: in vitro (crude extract), in vitro (purified protein) ID: 1703 Notes: The xxt1 xxt2 double mutant lacked detectable xyloglucan. | Organism (ID 12415): Arabidopsis thaliana Organ/tissue: stem, leaf, root, flower, bud Full structure (ID 35365): | ||
| Synthesized dimer: aDXylp(1-6)bDGlcp Donor (ID 35290): ?DXylp(1-P-P-5)xXnucU Acceptor (ID 35366): bDGlcp(1-4)bDGlcp(1-4)[aDXylp(1-6)]bDGlcp(1-4)[aDXylp(1-6)]bDGlcp(1-4)bDGlcp(1-4)bDGlcp Status: evidence in vitro
Confirmation methods: in vitro (purified protein) ID: 1704 Notes: XXT1 transfers aDXylp at C6 of bDGlcp at an unknown position in the oligomer. | Organism (ID 12415): Arabidopsis thaliana Organ/tissue: stem, leaf, root, flower, bud Exact full structure is unknown | Cavalier et al. 2008 DOI: 10.1105/tpc.108.059873 Faure et al. 2007 DOI: 10.1002/ejoc.200700395 Vuttipongchaikij et al. 2012 DOI: 10.1111/j.1469-8137.2012.04196.x Culbertson et al. 2016a DOI: 10.1104/pp.16.00361 | |
| Synthesized dimer: aDXylp(1-6)bDGlcp Donor (ID 35290): ?DXylp(1-P-P-5)xXnucU Acceptor (ID 35368): aDXylp(1-6)bDGlcp(1-4)[aDXylp(1-6)]bDGlcp(1-4)[aDXylp(1-6)]bDGlcp(1-4)bDGlcp(1-4)bDGlcp(1-4)bDGlcp(1-4)bDGlcp(1-4)bDGlcp Status: evidence in vitro
Confirmation methods: in vitro (crude extract) ID: 1705 Notes: XXT1 transfers aDXylp at C6 of bDGlcp at an unknown position in the oligomer. The xxt1 xxt2 double mutant lacked detectable xyloglucan. | Organism (ID 12415): Arabidopsis thaliana Organ/tissue: stem, leaf, root, flower, bud Exact full structure is unknown | Cavalier et al. 2008 DOI: 10.1105/tpc.108.059873 Faure et al. 2007 DOI: 10.1002/ejoc.200700395 Vuttipongchaikij et al. 2012 DOI: 10.1111/j.1469-8137.2012.04196.x | |
| Synthesized dimer: aDXylp(1-6)bDGlcp Donor (ID 35290): ?DXylp(1-P-P-5)xXnucU Acceptor (ID 35369): bDGlcp(1-4)bDGlcp(1-4)bDGlcp(1-4)bDGlcp(1-4)bDGlcp(1-4)bDGlcp(1-4)[aDXylp(1-6)]bDGlcp(1-4)[aDXylp(1-6)]bDGlcp(1-4)[aDXylp(1-6)]bDGlcp(1-4)bDGlcp Status: evidence in vitro
Confirmation methods: in vitro (crude extract) ID: 1706 Notes: XXT1 transfers aDXylp at C6 of bDGlcp at an unknown position in the oligomer. The xxt1 xxt2 double mutant lacked detectable xyloglucan. | Organism (ID 12415): Arabidopsis thaliana Organ/tissue: stem, leaf, root, flower, bud Exact full structure is unknown | ||
| Synthesized dimer: aDXylp(1-6)bDGlcp Donor (ID 35290): ?DXylp(1-P-P-5)xXnucU Acceptor (ID 35370): bDGlcp(1-4)bDGlcp(1-4)bDGlcp(1-4)bDGlcp(1-4)[aDXylp(1-6)]bDGlcp(1-4)[aDXylp(1-6)]bDGlcp(1-4)[aDXylp(1-6)]bDGlcp(1-4)bDGlcp Status: evidence in vitro
Confirmation methods: in vitro (crude extract) ID: 1707 Notes: XXT1 transfers aDXylp at C6 of bDGlcp at an unknown position in the oligomer. The xxt1 xxt2 double mutant lacked detectable xyloglucan. | Organism (ID 12415): Arabidopsis thaliana Organ/tissue: stem, leaf, root, flower, bud Exact full structure is unknown | ||
| Enzyme name: XXT2 UniProt ID: O22775.1 CAZy family: GT34 Gene name: AtXT2 / AT4G02500 Gene GenBank ID: 827940 | Synthesized dimer: aDXylp(1-6)bDGlcp Donor (ID 35290): ?DXylp(1-P-P-5)xXnucU Acceptor (ID 35358): bDGlcp(1-4)bDGlcp(1-4)bDGlcp(1-4)bDGlcp(1-4)bDGlcp Status: evidence in vitro
Confirmation methods: in vitro (crude extract) ID: 1708 Notes: The xxt1 xxt2 double mutant lacked detectable xyloglucan. | Organism (ID 12415): Arabidopsis thaliana Organ/tissue: stem, leaf, root, flower, bud Full structure (ID 35359): | Cavalier et al. 2006 DOI: 10.1074/jbc.M606379200 Cavalier et al. 2008 DOI: 10.1105/tpc.108.059873 Faure et al. 2007 DOI: 10.1002/ejoc.200700395 Vuttipongchaikij et al. 2012 DOI: 10.1111/j.1469-8137.2012.04196.x |
| Synthesized dimer: aDXylp(1-6)bDGlcp Donor (ID 35290): ?DXylp(1-P-P-5)xXnucU Acceptor (ID 35362): bDGlcp(1-4)bDGlcp(1-4)bDGlcp(1-4)bDGlcp(1-4)bDGlcp(1-4)bDGlcp Status: evidence in vitro
Confirmation methods: in vitro (crude extract), in vitro (purified protein), in vitro (deletion analysis) ID: 1709 Notes: The xxt1 xxt2 double mutant lacked detectable xyloglucan. | Organism (ID 12415): Arabidopsis thaliana Organ/tissue: stem, leaf, root, flower, bud Full structure (ID 35363): | Cavalier et al. 2006 DOI: 10.1074/jbc.M606379200 Cavalier et al. 2008 DOI: 10.1105/tpc.108.059873 Faure et al. 2007 DOI: 10.1002/ejoc.200700395 Vuttipongchaikij et al. 2012 DOI: 10.1111/j.1469-8137.2012.04196.x Culbertson et al. 2016a DOI: 10.1104/pp.16.00361 Culbertson et al. 2016b DOI: 10.1016/j.phytochem.2016.03.016 Culbertson et al. 2016c DOI: 10.1093/glycob/cww050 | |
| Synthesized dimer: aDXylp(1-6)bDGlcp Donor (ID 35290): ?DXylp(1-P-P-5)xXnucU Acceptor (ID 35364): bDGlcp(1-4)bDGlcp(1-4)[aDXylp(1-6)]bDGlcp(1-4)bDGlcp(1-4)bDGlcp(1-4)bDGlcp Status: evidence in vitro
Confirmation methods: in vitro (crude extract), in vitro (purified protein) ID: 1710 Notes: The xxt1 xxt2 double mutant lacked detectable xyloglucan. | Organism (ID 12415): Arabidopsis thaliana Organ/tissue: stem, leaf, root, flower, bud Full structure (ID 35365): | Cavalier et al. 2006 DOI: 10.1074/jbc.M606379200 Cavalier et al. 2008 DOI: 10.1105/tpc.108.059873 Faure et al. 2007 DOI: 10.1002/ejoc.200700395 Vuttipongchaikij et al. 2012 DOI: 10.1111/j.1469-8137.2012.04196.x Culbertson et al. 2016a DOI: 10.1104/pp.16.00361 Culbertson et al. 2016c DOI: 10.1093/glycob/cww050 | |
| Synthesized dimer: aDXylp(1-6)bDGlcp Donor (ID 35290): ?DXylp(1-P-P-5)xXnucU Acceptor (ID 35368): aDXylp(1-6)bDGlcp(1-4)[aDXylp(1-6)]bDGlcp(1-4)[aDXylp(1-6)]bDGlcp(1-4)bDGlcp(1-4)bDGlcp(1-4)bDGlcp(1-4)bDGlcp(1-4)bDGlcp Status: evidence in vitro
Confirmation methods: in vitro (crude extract) ID: 1711 Notes: XXT2 transfers aDXylp at C6 of bDGlcp at an unknown position in the oligomer. The xxt1 xxt2 double mutant lacked detectable xyloglucan. | Organism (ID 12415): Arabidopsis thaliana Organ/tissue: stem, leaf, root, flower, bud Exact full structure is unknown | Cavalier et al. 2008 DOI: 10.1105/tpc.108.059873 Faure et al. 2007 DOI: 10.1002/ejoc.200700395 Vuttipongchaikij et al. 2012 DOI: 10.1111/j.1469-8137.2012.04196.x | |
| Synthesized dimer: aDXylp(1-6)bDGlcp Donor (ID 35290): ?DXylp(1-P-P-5)xXnucU Acceptor (ID 35369): bDGlcp(1-4)bDGlcp(1-4)bDGlcp(1-4)bDGlcp(1-4)bDGlcp(1-4)bDGlcp(1-4)[aDXylp(1-6)]bDGlcp(1-4)[aDXylp(1-6)]bDGlcp(1-4)[aDXylp(1-6)]bDGlcp(1-4)bDGlcp Status: evidence in vitro
Confirmation methods: in vitro (crude extract) ID: 1712 Notes: XXT2 transfers aDXylp at C6 of bDGlcp at an unknown position in the oligomer. The xxt1 xxt2 double mutant lacked detectable xyloglucan. | Organism (ID 12415): Arabidopsis thaliana Organ/tissue: stem, leaf, root, flower, bud Exact full structure is unknown | ||
| Synthesized dimer: aDXylp(1-6)bDGlcp Donor (ID 35290): ?DXylp(1-P-P-5)xXnucU Acceptor (ID 35370): bDGlcp(1-4)bDGlcp(1-4)bDGlcp(1-4)bDGlcp(1-4)[aDXylp(1-6)]bDGlcp(1-4)[aDXylp(1-6)]bDGlcp(1-4)[aDXylp(1-6)]bDGlcp(1-4)bDGlcp Status: evidence in vitro
Confirmation methods: in vitro (crude extract) ID: 1713 Notes: XXT2 transfers aDXylp at C6 of bDGlcp at an unknown position in the oligomer. The xxt1 xxt2 double mutant lacked detectable xyloglucan. | Organism (ID 12415): Arabidopsis thaliana Organ/tissue: stem, leaf, root, flower, bud Exact full structure is unknown | ||
| Enzyme name: XXT4 UniProt ID: Q9M9U0.1 CAZy family: GT34 Gene name: AtGT4 / AT1G18690 Gene GenBank ID: 838450 | Synthesized dimer: DXylp(1-?)bDGlcp Donor (ID 35290): ?DXylp(1-P-P-5)xXnucU Acceptor (ID 35362): bDGlcp(1-4)bDGlcp(1-4)bDGlcp(1-4)bDGlcp(1-4)bDGlcp(1-4)bDGlcp Status: evidence in vitro
Confirmation methods: in vitro (purified protein) ID: 1714 Notes: XXT4 transfers up to three aDXylp at bDGlcp at an unknown position in the oligomer. | Organism (ID 12415): Arabidopsis thaliana Organ/tissue: stem Exact full structure is unknown | Vuttipongchaikij et al. 2012 DOI: 10.1111/j.1469-8137.2012.04196.x |
| Enzyme name: XXT5 UniProt ID: Q9CA75.1 CAZy family: GT34 Gene name: AT1G74380 Gene GenBank ID: 843779 | Synthesized dimer: aDXylp(1-6)bDGlcp Donor (ID 35290): ?DXylp(1-P-P-5)xXnucU Acceptor (ID 35362): bDGlcp(1-4)bDGlcp(1-4)bDGlcp(1-4)bDGlcp(1-4)bDGlcp(1-4)bDGlcp Status: semi-direct evidence in vivo
Confirmation methods: mutation, complementation, in vitro (purified protein) ID: 1715 | Organism (ID 12415): Arabidopsis thaliana Organ/tissue: stem, leaf, root, flower, bud, silique Full structure (ID 35363): | Vuttipongchaikij et al. 2012 DOI: 10.1111/j.1469-8137.2012.04196.x Culbertson et al. 2016a DOI: 10.1104/pp.16.00361 Zabotina et al. 2008 DOI: 10.1111/j.1365-313X.2008.03580.x |
| Synthesized dimer: aDXylp(1-6)bDGlcp Donor (ID 35290): ?DXylp(1-P-P-5)xXnucU Acceptor (ID 35364): bDGlcp(1-4)bDGlcp(1-4)[aDXylp(1-6)]bDGlcp(1-4)bDGlcp(1-4)bDGlcp(1-4)bDGlcp Status: semi-direct evidence in vivo
Confirmation methods: mutation, complementation, in vitro (purified protein) ID: 1716 | Organism (ID 12415): Arabidopsis thaliana Organ/tissue: stem, leaf, root, flower, bud, silique Full structure (ID 35365): | ||
| Synthesized dimer: aDXylp(1-6)bDGlcp Donor (ID 35290): ?DXylp(1-P-P-5)xXnucU Acceptor (ID 35366): bDGlcp(1-4)bDGlcp(1-4)[aDXylp(1-6)]bDGlcp(1-4)[aDXylp(1-6)]bDGlcp(1-4)bDGlcp(1-4)bDGlcp Status: semi-direct evidence in vivo
Confirmation methods: mutation, complementation, in vitro (purified protein) ID: 1717 Notes: XXT5 transfers up to three aDXylp at bDGlcp at an unknown position in the oligomer. | Organism (ID 12415): Arabidopsis thaliana Organ/tissue: stem, leaf, root, flower, bud, silique Exact full structure is unknown | ||
| Enzyme name: XYLT UniProt ID: Q9LDH0.1 CAZy family: GT61 Gene name: XYLT / AT5G55500 Gene GenBank ID: 835643 | Synthesized dimer: bDXylp(1-2)bDManp Donor (ID 35290): ?DXylp(1-P-P-5)xXnucU Acceptor (ID 35372): Ac(1-2)bDGlcpN(1-2)aDManp(1-3)[aDManp(1-6)]bDManp(1-1)Oc Status: evidence in vitro
Confirmation methods: in vitro(crude extract), in vitro (purified protein), mutation (in recombinant protein) ID: 1718 Notes: XYLT is required for synthesis of bDXylp(1-2)[aDManp(1-3),aDManp(1-6)]bDManp(1-4)[Ac(1-2)]bDGlcpN(1-4)[Ac(1-2),aLFucp(1-3)]bDGlcpN, bDXylp(1-2)[Ac(1-2)bDGlcpN(1-2)aDManp(1-3),aDManp(1-6)]bDManp(1-4)[Ac(1-2)]bDGlcpN(1-4)[Ac(1-2),aLFucp(1-3)]bDGlcpN, bDXylp(1-2)[Ac(1-2)bDGlcpN(1-2)aDManp(1-3),Ac(1-2)bDGlcpN(1-2)aDManp(1-6)]bDManp(1-4)[Ac(1-2)]bDGlcpN(1-4)[Ac(1-2),aLFucp(1-3)]bDGlcpN in planta. | Organism (ID 12415): Arabidopsis thaliana Full structure (ID 35373): | Yoo et al. 2015 DOI: 10.1074/jbc.M115.653162 Pagny et al. 2003 DOI: 10.1046/j.0960-7412.2002.01604.x Bencur et al. 2005 DOI: 10.1042/BJ20042091 Kajiura et al. 2012 DOI: 10.1016/j.jbiosc.2011.09.011 Strasser et al. 2004 DOI: 10.1016/S0014-5793(04)00150-4 |
| Synthesized dimer: bDXylp(1-2)bDManp Donor (ID 35290): ?DXylp(1-P-P-5)xXnucU Acceptor (ID 35374): Ac(1-2)bDGlcpN(1-2)aDManp(1-3)[Ac(1-2)bDGlcpN(1-2)aDManp(1-6)]bDManp(1-4)[Ac(1-2)]bDGlcpN(1-4)[Ac(1-2)]bDGlcpN1N(1-4)x?Asn Status: direct evidence in vivo
Confirmation methods: in vitro(crude extract), in vitro (purified protein), mutation ID: 1719 Notes: XYLT is required for synthesis of bDXylp(1-2)[aDManp(1-3),aDManp(1-6)]bDManp(1-4)[Ac(1-2)]bDGlcpN(1-4)[Ac(1-2),aLFucp(1-3)]bDGlcpN, bDXylp(1-2)[Ac(1-2)bDGlcpN(1-2)aDManp(1-3),aDManp(1-6)]bDManp(1-4)[Ac(1-2)]bDGlcpN(1-4)[Ac(1-2),aLFucp(1-3)]bDGlcpN, bDXylp(1-2)[Ac(1-2)bDGlcpN(1-2)aDManp(1-3),Ac(1-2)bDGlcpN(1-2)aDManp(1-6)]bDManp(1-4)[Ac(1-2)]bDGlcpN(1-4)[Ac(1-2),aLFucp(1-3)]bDGlcpN in planta. | Organism (ID 12415): Arabidopsis thaliana Full structure (ID 35375): | Yoo et al. 2015 DOI: 10.1074/jbc.M115.653162 Pagny et al. 2003 DOI: 10.1046/j.0960-7412.2002.01604.x Bencur et al. 2005 DOI: 10.1042/BJ20042091 Kajiura et al. 2012 DOI: 10.1016/j.jbiosc.2011.09.011 Strasser et al. 2004 DOI: 10.1016/S0014-5793(04)00150-4 Strasser et al. 2000 DOI: 10.1016/S0014-5793(00)01443-5 | |
| Synthesized dimer: bDXylp(1-2)bDManp Donor (ID 35290): ?DXylp(1-P-P-5)xXnucU Acceptor (ID 35376): Ac(1-2)bDGlcpN(1-2)aDManp(1-3)[aDManp(1-3)[aDManp(1-6)]aDManp(1-6)]bDManp(1-4)[Ac(1-2)]bDGlcpN(1-4)[Ac(1-2)]bDGlcpN1N(1-4)x?Asn Status: direct evidence in vivo
Confirmation methods: in vitro(crude extract), in vitro (purified protein), mutation ID: 1720 Notes: XYLT is required for synthesis of bDXylp(1-2)[aDManp(1-3),aDManp(1-6)]bDManp(1-4)[Ac(1-2)]bDGlcpN(1-4)[Ac(1-2),aLFucp(1-3)]bDGlcpN, bDXylp(1-2)[Ac(1-2)bDGlcpN(1-2)aDManp(1-3),aDManp(1-6)]bDManp(1-4)[Ac(1-2)]bDGlcpN(1-4)[Ac(1-2),aLFucp(1-3)]bDGlcpN, bDXylp(1-2)[Ac(1-2)bDGlcpN(1-2)aDManp(1-3),Ac(1-2)bDGlcpN(1-2)aDManp(1-6)]bDManp(1-4)[Ac(1-2)]bDGlcpN(1-4)[Ac(1-2),aLFucp(1-3)]bDGlcpN in planta. | Organism (ID 12415): Arabidopsis thaliana Full structure (ID 35377): | Yoo et al. 2015 DOI: 10.1074/jbc.M115.653162 Bencur et al. 2005 DOI: 10.1042/BJ20042091 Kajiura et al. 2012 DOI: 10.1016/j.jbiosc.2011.09.011 Strasser et al. 2004 DOI: 10.1016/S0014-5793(04)00150-4 | |
| Synthesized dimer: bDXylp(1-2)bDManp Donor (ID 35290): ?DXylp(1-P-P-5)xXnucU Acceptor (ID 35378): Ac(1-2)bDGlcpN(1-2)aDManp(1-3)[Ac(1-2)bDGlcpN(1-2)aDManp(1-6)]bDManp(1-1)Oc Status: evidence in vitro
Confirmation methods: in vitro(crude extract), in vitro (purified protein), mutation (in recombinant protein) ID: 1721 Notes: XYLT is required for synthesis of bDXylp(1-2)[aDManp(1-3),aDManp(1-6)]bDManp(1-4)[Ac(1-2)]bDGlcpN(1-4)[Ac(1-2),aLFucp(1-3)]bDGlcpN, bDXylp(1-2)[Ac(1-2)bDGlcpN(1-2)aDManp(1-3),aDManp(1-6)]bDManp(1-4)[Ac(1-2)]bDGlcpN(1-4)[Ac(1-2),aLFucp(1-3)]bDGlcpN, bDXylp(1-2)[Ac(1-2)bDGlcpN(1-2)aDManp(1-3),Ac(1-2)bDGlcpN(1-2)aDManp(1-6)]bDManp(1-4)[Ac(1-2)]bDGlcpN(1-4)[Ac(1-2),aLFucp(1-3)]bDGlcpN in planta. | Organism (ID 12415): Arabidopsis thaliana Full structure (ID 35379): | ||
| Synthesized dimer: bDXylp(1-2)bDManp Donor (ID 35290): ?DXylp(1-P-P-5)xXnucU Acceptor (ID 35380): Ac(1-2)bDGlcpN(1-2)aDManp(1-3)[aDManp(1-6)]bDManp(1-4)[Ac(1-2)]bDGlcpN(1-4)[Ac(1-2)]bDGlcpN1N(1-4)x?Asn Status: indirect evidence in vivo
Confirmation methods: mutation ID: 1722 Notes: Suggested activity in planta. XYLT is required for synthesis of bDXylp(1-2)[aDManp(1-3),aDManp(1-6)]bDManp(1-4)[Ac(1-2)]bDGlcpN(1-4)[Ac(1-2),aLFucp(1-3)]bDGlcpN, bDXylp(1-2)[Ac(1-2)bDGlcpN(1-2)aDManp(1-3),aDManp(1-6)]bDManp(1-4)[Ac(1-2)]bDGlcpN(1-4)[Ac(1-2),aLFucp(1-3)]bDGlcpN, bDXylp(1-2)[Ac(1-2)bDGlcpN(1-2)aDManp(1-3),Ac(1-2)bDGlcpN(1-2)aDManp(1-6)]bDManp(1-4)[Ac(1-2)]bDGlcpN(1-4)[Ac(1-2),aLFucp(1-3)]bDGlcpN in planta. | Organism (ID 12415): Arabidopsis thaliana Full structure (ID 35381): | ||
| Enzyme name: DGD2 UniProt ID: Q8W1S1 CAZy family: GT4 Gene name: DGD2 / AT4G00550 Gene GenBank ID: 827960 | Synthesized dimer: aDGalp(1-6)bDGalp Donor (ID 35039): aDGalp(1-P-P-5)xXnucU Acceptor (ID 35382): bDGalp(1-1)[LIP(1-3),LIP(1-2)]xDGro Status: direct evidence in vivo
Confirmation methods: in vitro (membrane protein fraction), in vitro (crude extract), in vitro (purified protein), mutation, mutation (in vitro), expression in E.coli ID: 1723 Notes: In wild-type Arabidopsis, monogalactosyldiacylglycerol (MGDG) contains high amounts of 16:3 and 18:3 fatty acids, whereas digalactosyldiacylglycerol (DGDG) contains mostly 16:0 and 18:3 fatty acids. | Organism (ID 12415): Arabidopsis thaliana Expressed in: E. coli; leaf, flower, root, seedling Full structure (ID 27659): CSDB ID(s): 60938, 61032, 61033, 61036, 61037 | Kelly et al. 2002 DOI: 10.1074/jbc.M110066200 Kelly et al. 2003 DOI: 10.1105/tpc.016675 Ge et al. 2011 DOI: 10.1074/jbc.M110.138495 Wikstroem et al. 2009 DOI: 10.1074/jbc.M804482200 Kelly et al. 2016 DOI: 10.1073/pnas.1609184113 Fu et al. 2020 DOI: 10.1021/acs.biochem.0c00028 |
| Synthesized dimer: aDGalp(1-6)aDGalp Donor (ID 35039): aDGalp(1-P-P-5)xXnucU Acceptor (ID 35383): aDGalp(1-6)bDGalp(1-1)[LIP(1-3),LIP(1-2)]xDGro Status: evidence in vitro
Confirmation methods: in vitro (membrane protein fraction), in vitro (purified protein) ID: 1724 Notes: In wild-type Arabidopsis, monogalactosyldiacylglycerol (MGDG) contains high amounts of 16:3 and 18:3 fatty acids, whereas digalactosyldiacylglycerol (DGDG) contains mostly 16:0 and 18:3 fatty acids. | Organism (ID 12415): Arabidopsis thaliana Organ/tissue: leaf, flower, root, seedling Full structure (ID 35384): | Kelly et al. 2002 DOI: 10.1074/jbc.M110066200 Kelly et al. 2003 DOI: 10.1105/tpc.016675 Fu et al. 2020 DOI: 10.1021/acs.biochem.0c00028 | |
| Enzyme name: DGD1 UniProt ID: Q9S7D1 CAZy family: GT4 Gene name: DGD1 / AT3G11670 Gene GenBank ID: 820339 | Synthesized dimer: aDGalp(1-6)bDGalp Donor (ID 35039): aDGalp(1-P-P-5)xXnucU Acceptor (ID 35382): bDGalp(1-1)[LIP(1-3),LIP(1-2)]xDGro Status: direct evidence in vivo
Confirmation methods: in vitro (membrane protein fraction), mutation, expression in E.coli ID: 1725 Notes: In wild-type Arabidopsis, monogalactosyldiacylglycerol (MGDG) contains high amounts of 16:3 and 18:3 fatty acids, whereas digalactosyldiacylglycerol (DGDG) contains mostly 16:0 and 18:3 fatty acids. DGD1 is involved in the synthesis of a DGDG molecular species rich in C18 fatty acids during optimal and phosphate-deficient conditions. The galactolipid synthases MGD1 and DGD1 catalyze consecutive galactosyltransfer reactions but localize to the inner and outer chloroplast envelopes, respectively, necessitating intermembrane lipid transfer. The N-terminal sequence of DGD1 (NDGD1) is required for galactolipid transfer between the envelopes. | Organism (ID 12415): Arabidopsis thaliana Expressed in: E. coli; leaf, flower, root, seedling Full structure (ID 27659): CSDB ID(s): 60938, 61032, 61033, 61036, 61037 | Kelly et al. 2002 DOI: 10.1074/jbc.M110066200 Kelly et al. 2003 DOI: 10.1105/tpc.016675 Kelly et al. 2016 DOI: 10.1073/pnas.1609184113 Doermann et al. 1995 DOI: 10.1105/tpc.7.11.1801 Doermann et al. 1999 DOI: 10.1126/science.284.5423.2181 |
| Enzyme name: DPE1 UniProt ID: Q9LV91.1 CAZy family: GH77 Gene name: AT5G64860 Gene GenBank ID: 836609 | Synthesized dimer: aDGlcp(1-4)aDGlcp Donor (ID 35385): aDGlcp(1-4)aDGlcp(1-4)?DGlcp Acceptor (ID 35385): aDGlcp(1-4)aDGlcp(1-4)?DGlcp Status: indirect evidence in vivo
Confirmation methods: mutation ID: 1726 Notes: Disproportionating enzyme; transfers aDGlcp(1-4)aDGlcp from one aDGlcp(1-4)aDGlcp(1-4)?DGlcp to another aDGlcp(1-4)aDGlcp(1-4)?DGlcp resulting in aDGlcp(1-4)aDGlcp(1-4)aDGlcp(1-4)aDGlcp(1-4)?DGlcp and ?DGlcp | Organism (ID 12415): Arabidopsis thaliana Organ/tissue: leaf Full structure (ID 35386): Side product (ID 35387): | Critchley et al. 2001 DOI: 10.1046/j.1365-313x.2001.01012.x |
| Synthesized dimer: aDGlcp(1-4)aDGlcp Donor (ID 35385): aDGlcp(1-4)aDGlcp(1-4)?DGlcp Acceptor (ID 35388): aDGlcp(1-4)aDGlcp(1-4)aDGlcp(1-4)aDGlcp(1-4)?DGlcp Status: indirect evidence in vivo
Confirmation methods: mutation ID: 1727 Notes: Disproportionating enzyme; transfers aDGlcp(1-4)aDGlcp from one aDGlcp(1-4)aDGlcp(1-4)aDGlcp(1-4)aDGlcp(1-4)?DGlcp to another aDGlcp(1-4)aDGlcp(1-4)aDGlcp(1-4)aDGlcp(1-4)?DGlcp resulting in aDGlcp(1-4)aDGlcp(1-4)aDGlcp(1-4)aDGlcp(1-4)aDGlcp(1-4)aDGlcp(1-4)?DGlcp and ?DGlcp | Organism (ID 12415): Arabidopsis thaliana Organ/tissue: leaf Full structure (ID 35389): Side product (ID 35387): | ||
| Enzyme name: DPE2 UniProt ID: Q8RXD9.1 CAZy family: CBM20; GH77 Gene name: AT2G40840 Gene GenBank ID: 818682 | Synthesized dimer: aDGlcp(1-4)aDGlcp Donor (ID 35390): aDGlcp(1-4)?DGlcp Acceptor (ID 35391): Subst // Subst = Glycogen, amylopectin Status: indirect evidence in vivo
Confirmation methods: mutation ID: 1728 Notes: Disproportionating enzyme | Organism (ID 12415): Arabidopsis thaliana Organ/tissue: leaf Exact full structure is unknown | Chia et al. 2004 DOI: 10.1111/j.1365-313X.2003.02012.x |
| Enzyme name: AtFUT1 UniProt ID: Q9SWH5.2 CAZy family: GT37 Gene name: FT1 / MUR2 / AT2G03220 Gene GenBank ID: 814851 | Synthesized dimer: aLFucp(1-2)bDGalp Donor (ID 35324): bLFucp(1-P-P-5)xXnucG Acceptor (ID 35393): aDXylp(1-6)bDGlcp(1-4)[aDXylp(1-6)]bDGlcp(1-4)[bDGalp(1-2)aDXylp(1-6)]bDGlcp(1-4)bDGlcp Status: indirect evidence in vivo
Confirmation methods: mutation ID: 1729 | Organism (ID 12415): Arabidopsis thaliana Organ/tissue: root, stem, leaf, flower, silique, seedling Full structure (ID 27721): CSDB ID(s): 61045, 61052, 61088 | Vanzin et al. 2002 DOI: 10.1073/pnas.052450699 Sarria et al. 2001 DOI: 10.1104/pp.010596 Perrin et al. 2003 DOI: 10.1104/pp.102.016642 Ciceron et al. 2016 DOI: 10.1016/j.biochi.2016.08.012 |
| Synthesized dimer: aLFucp(1-2)bDGalp Donor (ID 35324): bLFucp(1-P-P-5)xXnucG Acceptor (ID 35394): aDXylp(1-6)bDGlcp(1-4)[bDGalp(1-2)aDXylp(1-6)]bDGlcp(1-4)[bDGalp(1-2)aDXylp(1-6)]bDGlcp(1-4)bDGlcp Status: semi-direct evidence in vivo
Confirmation methods: mutation, in vitro (purified protein) ID: 1730 Notes: A tamarind xyloglucan oligosaccharide (XLLG) was used as substrate. | Organism (ID 12415): Arabidopsis thaliana Organ/tissue: root, stem, leaf, flower, silique, seedling Full structure (ID 27722): CSDB ID(s): 61046, 61053, 61090 | Vanzin et al. 2002 DOI: 10.1073/pnas.052450699 Sarria et al. 2001 DOI: 10.1104/pp.010596 Perrin et al. 2003 DOI: 10.1104/pp.102.016642 Ciceron et al. 2016 DOI: 10.1016/j.biochi.2016.08.012 Rocha et al. 2016 DOI: 10.1105/tpc.16.00519 | |
| Synthesized dimer: aLFucp(1-2)bDGalpA Donor (ID 35324): bLFucp(1-P-P-5)xXnucG Acceptor (ID 35395): aDXylp(1-6)bDGlcp(1-4)[aDXylp(1-6)]bDGlcp(1-4)[bDGalpA(1-2)aDXylp(1-6)]bDGlcp(1-4)bDGlcp Status: indirect evidence in vivo
Confirmation methods: mutation ID: 1731 | Organism (ID 12415): Arabidopsis thaliana Organ/tissue: root, stem, leaf, flower, silique, seedling Full structure (ID 27731): CSDB ID(s): 61056 | Sarria et al. 2001 DOI: 10.1104/pp.010596 Perrin et al. 2003 DOI: 10.1104/pp.102.016642 Ciceron et al. 2016 DOI: 10.1016/j.biochi.2016.08.012 Pena et al. 2012 DOI: 10.1105/tpc.112.103390 | |
| Synthesized dimer: aLFucp(1-2)bDGalp Donor (ID 35324): bLFucp(1-P-P-5)xXnucG Acceptor (ID 35396): aDXylp(1-6)bDGlcp(1-4)[bDGalp(1-2)aDXylp(1-6)]bDGlcp(1-4)[bDGalp(1-2)aDXylp(1-6)]bDGlcp(1-4)bDGlcp(1-4)[aDXylp(1-6)]bDGlcp(1-4)[bDGalp(1-2)aDXylp(1-6)]bDGlcp(1-4)[bDGalp(1-2)aDXylp(1-6)]bDGlcp(1-4)bDGlcp Status: evidence in vitro
Confirmation methods: in vitro (purified protein) ID: 1732 Notes: A tamarind xyloglucan oligosaccharide (XLLGXLLG) was used as substrate. The substitution position is assumed. | Organism (ID 12415): Arabidopsis thaliana Organ/tissue: root, stem, leaf, flower, silique, seedling Full structure (ID 35397): | Sarria et al. 2001 DOI: 10.1104/pp.010596 Perrin et al. 2003 DOI: 10.1104/pp.102.016642 Ciceron et al. 2016 DOI: 10.1016/j.biochi.2016.08.012 | |
| Enzyme name: AtFUT4 UniProt ID: Q9SJP2.2 CAZy family: GT37 Gene name: AT2G15390 Gene GenBank ID: 816031 | Synthesized dimer: aLFucp(1-2)aAraf Donor (ID 35398): ?LFucp(1-P-P-5)xXnucG Acceptor (ID 35399): b?Galp(1-3)b?Galp(1-6)b?Galp(1-3)[a?Araf(1-5)a?Araf(1-3)a?Araf(1-3)[a?Rhap(1-4)bDGlcpA(1-6)]b?Galp(1-6)]b?Galp(1-3)[a?Araf(1-3)a?Araf(1-3)[bDGlcpA(1-6)]b?Galp(1-6)]b?Galp(1-4)x?Hyp? Status: direct evidence in vivo
Confirmation methods: in vitro (microsomal membrane preparation), mutation ID: 1733 Notes: AtFUT4 incorporates terminal alpha-L-Fuc residues on the C-2 positions of adjacent Ara residues of arabinogalactan proteins. An idealized structure is given in the paper, but the exact sites of fucosylation are unclear. | Organism (ID 12415): Arabidopsis thaliana Organ/tissue: root, stem, leaf, flower, seedling Exact full structure is unknown | Sarria et al. 2001 DOI: 10.1104/pp.010596 Wu et al. 2010a DOI: 10.1074/jbc.M110.102715 Liang et al. 2013 DOI: 10.1093/jxb/ert321 |
| Enzyme name: AtFUT6 Gene name: AT1G14080 Gene GenBank ID: 837968 | Synthesized dimer: aLFucp(1-2)aAraf Donor (ID 35398): ?LFucp(1-P-P-5)xXnucG Acceptor (ID 35399): b?Galp(1-3)b?Galp(1-6)b?Galp(1-3)[a?Araf(1-5)a?Araf(1-3)a?Araf(1-3)[a?Rhap(1-4)bDGlcpA(1-6)]b?Galp(1-6)]b?Galp(1-3)[a?Araf(1-3)a?Araf(1-3)[bDGlcpA(1-6)]b?Galp(1-6)]b?Galp(1-4)x?Hyp? Status: direct evidence in vivo
Confirmation methods: in vitro (microsomal membrane preparation), mutation ID: 1734 Notes: AtFUT6 incorporates terminal alpha-L-Fuc residues on the C-2 positions of adjacent Ara residues of arabinogalactan proteins. An idealized structure is given in the paper, but the exact sites of fucosylation are unclear. | Organism (ID 12415): Arabidopsis thaliana Organ/tissue: root, flower Exact full structure is unknown | |
| Enzyme name: AtFUT11 UniProt ID: Q9LJK1.1 CAZy family: GT10 Gene name: FUT11 / FucTA / AT3G19280 Gene GenBank ID: 821462 | Synthesized dimer: aLFucp(1-3)bDGlcpN1N Donor (ID 35398): ?LFucp(1-P-P-5)xXnucG Acceptor (ID 35374): Ac(1-2)bDGlcpN(1-2)aDManp(1-3)[Ac(1-2)bDGlcpN(1-2)aDManp(1-6)]bDManp(1-4)[Ac(1-2)]bDGlcpN(1-4)[Ac(1-2)]bDGlcpN1N(1-4)x?Asn Status: direct evidence in vivo
Confirmation methods: in vitro (crude extract), mutation ID: 1735 Notes: Both AtFUT11 and AtFUT12 are required for synthesis of bDXylp(1-2)[aDManp(1-3),aDManp(1-6)]bDManp(1-4)[Ac(1-2)]bDGlcpN(1-4)[Ac(1-2),aLFucp(1-3)]bDGlcpN, bDXylp(1-2)[Ac(1-2)bDGlcpN(1-2)aDManp(1-3),aDManp(1-6)]bDManp(1-4)[Ac(1-2)]bDGlcpN(1-4)[Ac(1-2),aLFucp(1-3)]bDGlcpN, bDXylp(1-2)[Ac(1-2)bDGlcpN(1-2)aDManp(1-3),Ac(1-2)bDGlcpN(1-2)aDManp(1-6)]bDManp(1-4)[Ac(1-2)]bDGlcpN(1-4)[Ac(1-2),aLFucp(1-3)]bDGlcpN in planta. | Organism (ID 12415): Arabidopsis thaliana Full structure (ID 35401): | Strasser et al. 2004 DOI: 10.1016/S0014-5793(04)00150-4 Wilson et al. 2001 DOI: 10.1016/S0304-4165(01)00151-9 |
| Synthesized dimer: aLFucp(1-3)bDGlcpN1N Donor (ID 35398): ?LFucp(1-P-P-5)xXnucG Acceptor (ID 35402): Ac(1-2)bDGlcpN(1-2)aDManp(1-3)[Ac(1-2)bDGlcpN(1-2)aDManp(1-6)]bDManp(1-4)[Ac(1-2)]bDGlcpN(1-4)[aLFucp(1-6),Ac(1-2)]bDGlcpN1N(1-4)x?Asn Status: direct evidence in vivo
Confirmation methods: in vitro (purified protein), mutation ID: 1736 Notes: Both AtFUT11 and AtFUT12 are required for synthesis of bDXylp(1-2)[aDManp(1-3),aDManp(1-6)]bDManp(1-4)[Ac(1-2)]bDGlcpN(1-4)[Ac(1-2),aLFucp(1-3)]bDGlcpN, bDXylp(1-2)[Ac(1-2)bDGlcpN(1-2)aDManp(1-3),aDManp(1-6)]bDManp(1-4)[Ac(1-2)]bDGlcpN(1-4)[Ac(1-2),aLFucp(1-3)]bDGlcpN, bDXylp(1-2)[Ac(1-2)bDGlcpN(1-2)aDManp(1-3),Ac(1-2)bDGlcpN(1-2)aDManp(1-6)]bDManp(1-4)[Ac(1-2)]bDGlcpN(1-4)[Ac(1-2),aLFucp(1-3)]bDGlcpN in planta. | Organism (ID 12415): Arabidopsis thaliana Full structure (ID 35403): | Yoo et al. 2015 DOI: 10.1074/jbc.M115.653162 Strasser et al. 2004 DOI: 10.1016/S0014-5793(04)00150-4 Both et al. 2011 DOI: 10.1093/glycob/cwr056 | |
| Synthesized dimer: aLFucp(1-3)bDGlcpN1N Donor (ID 35398): ?LFucp(1-P-P-5)xXnucG Acceptor (ID 35404): bDXylp(1-2)[aDManp(1-6),Ac(1-2)bDGlcpN(1-2)aDManp(1-3)]bDManp(1-4)[Ac(1-2)]bDGlcpN(1-4)[Ac(1-2)]bDGlcpN1N(1-4)x?Asn Status: indirect evidence in vivo
Confirmation methods: mutation ID: 1737 Notes: Suggested activity in planta. Both AtFUT11 and AtFUT12 are required for synthesis of bDXylp(1-2)[aDManp(1-3),aDManp(1-6)]bDManp(1-4)[Ac(1-2)]bDGlcpN(1-4)[Ac(1-2),aLFucp(1-3)]bDGlcpN, bDXylp(1-2)[Ac(1-2)bDGlcpN(1-2)aDManp(1-3),aDManp(1-6)]bDManp(1-4)[Ac(1-2)]bDGlcpN(1-4)[Ac(1-2),aLFucp(1-3)]bDGlcpN, bDXylp(1-2)[Ac(1-2)bDGlcpN(1-2)aDManp(1-3),Ac(1-2)bDGlcpN(1-2)aDManp(1-6)]bDManp(1-4)[Ac(1-2)]bDGlcpN(1-4)[Ac(1-2),aLFucp(1-3)]bDGlcpN in planta. | Organism (ID 12415): Arabidopsis thaliana Full structure (ID 35405): | Yoo et al. 2015 DOI: 10.1074/jbc.M115.653162 Strasser et al. 2004 DOI: 10.1016/S0014-5793(04)00150-4 | |
| Synthesized dimer: aLFucp(1-3)bDGlcpN1N Donor (ID 35406): ?LGalp(1-P-P-5)xXnucG Acceptor (ID 35407): bDManp(1-?)bDManp(1-4)[Ac(1-2)]bDGlcpN(1-4)[Ac(1-2)]bDGlcpN1N(1-4)x?Asn Status: evidence in vitro
Confirmation methods: in vitro (purified protein) ID: 1738 Notes: The substrate structure are assumed. | Organism (ID 12415): Arabidopsis thaliana Full structure (ID 35408): | Ohashi et al. 2017 DOI: 10.1016/j.bbrc.2016.12.087 | |
| Synthesized dimer: aLGalp(1-?)bDGlcpN1N Donor (ID 35406): ?LGalp(1-P-P-5)xXnucG Acceptor (ID 35407): bDManp(1-?)bDManp(1-4)[Ac(1-2)]bDGlcpN(1-4)[Ac(1-2)]bDGlcpN1N(1-4)x?Asn Status: evidence in vitro
Confirmation methods: in vitro (purified protein) ID: 1739 Notes: The substitution position (bDGlcpN) and substrate structure are assumed. | Organism (ID 12415): Arabidopsis thaliana Full structure (ID 35409): | ||
| Enzyme name: AtFUT12 UniProt ID: Q9FX97.1 CAZy family: GT10 Gene name: FUT12 / FucTB / AT1G49710 Gene GenBank ID: 841394 | Synthesized dimer: aLFucp(1-3)bDGlcpN1N Donor (ID 35398): ?LFucp(1-P-P-5)xXnucG Acceptor (ID 35404): bDXylp(1-2)[aDManp(1-6),Ac(1-2)bDGlcpN(1-2)aDManp(1-3)]bDManp(1-4)[Ac(1-2)]bDGlcpN(1-4)[Ac(1-2)]bDGlcpN1N(1-4)x?Asn Status: indirect evidence in vivo
Confirmation methods: mutation ID: 1740 Notes: Suggested activity in planta. Both AtFUT11 and AtFUT12 are required for synthesis of bDXylp(1-2)[aDManp(1-3),aDManp(1-6)]bDManp(1-4)[Ac(1-2)]bDGlcpN(1-4)[Ac(1-2),aLFucp(1-3)]bDGlcpN, bDXylp(1-2)[Ac(1-2)bDGlcpN(1-2)aDManp(1-3),aDManp(1-6)]bDManp(1-4)[Ac(1-2)]bDGlcpN(1-4)[Ac(1-2),aLFucp(1-3)]bDGlcpN, bDXylp(1-2)[Ac(1-2)bDGlcpN(1-2)aDManp(1-3),Ac(1-2)bDGlcpN(1-2)aDManp(1-6)]bDManp(1-4)[Ac(1-2)]bDGlcpN(1-4)[Ac(1-2),aLFucp(1-3)]bDGlcpN in planta. | Organism (ID 12415): Arabidopsis thaliana Organ/tissue: leaf, silique, stem Full structure (ID 35405): | Yoo et al. 2015 DOI: 10.1074/jbc.M115.653162 Strasser et al. 2004 DOI: 10.1016/S0014-5793(04)00150-4 Strasser et al. 2007 DOI: 10.1105/tpc.107.052985 |
| Enzyme name: AtFUT13 UniProt ID: Q9C8W3.2 CAZy family: GT10 Gene name: FUT13 / FT4 / FucTC / AT1G71990 Gene GenBank ID: 843530 | Synthesized dimer: aLFucp(1-4)DGlcpN Donor (ID 35398): ?LFucp(1-P-P-5)xXnucG Acceptor (ID 35410): b?Galp(1-3)[Ac(1-2)]?DGlcpN Status: evidence in vitro
Confirmation methods: in vitro (crude extract) ID: 1741 | Organism (ID 12415): Arabidopsis thaliana Organ/tissue: leaf, flower, root Full structure (ID 35411): | Leonard et al. 2002 DOI: 10.1093/glycob/12.5.299 |
| Synthesized dimer: aLFucp(1-4)DGlcpN Donor (ID 35398): ?LFucp(1-P-P-5)xXnucG Acceptor (ID 35412): aLFucp(1-2)b?Galp(1-3)[Ac(1-2)]?DGlcpN Status: evidence in vitro
Confirmation methods: in vitro (crude extract) ID: 1742 | Organism (ID 12415): Arabidopsis thaliana Organ/tissue: leaf, flower, root Full structure (ID 35413): | ||
| Synthesized dimer: aLFuc(1-4)bDGlcpN Donor (ID 35398): ?LFucp(1-P-P-5)xXnucG Acceptor (ID 35414): bDGalp(1-3)[Ac(1-2)]bDGlcpN(1-2)aDManp(1-3)[Ac(1-2)bDGlcpN(1-2)aDManp(1-6)]bDManp(1-4)[Ac(1-2)]bDGlcpN(1-4)[Ac(1-2)]bDGlcpN1N(1-4)x?Asn Status: evidence in vitro
Confirmation methods: in vitro (purified protein) ID: 1743 | Organism (ID 12415): Arabidopsis thaliana Organ/tissue: leaf, flower, root Full structure (ID 35415): | Strasser et al. 2007 DOI: 10.1105/tpc.107.052985 Leonard et al. 2002 DOI: 10.1093/glycob/12.5.299 | |
| Synthesized dimer: aLFuc(1-4)bDGlcpN Donor (ID 35398): ?LFucp(1-P-P-5)xXnucG Acceptor (ID 35416): Ac(1-2)bDGlcpN(1-2)aDManp(1-3)[bDGalp(1-3)[Ac(1-2)]bDGlcpN(1-2)aDManp(1-6)]bDManp(1-4)[Ac(1-2)]bDGlcpN(1-4)[Ac(1-2)]bDGlcpN1N(1-4)x?Asn Status: evidence in vitro
Confirmation methods: in vitro (purified protein) ID: 1744 | Organism (ID 12415): Arabidopsis thaliana Organ/tissue: leaf, flower, root Full structure (ID 35417): | ||
| Synthesized dimer: aLFuc(1-4)bDGlcpN Donor (ID 35398): ?LFucp(1-P-P-5)xXnucG Acceptor (ID 35418): bDGalp(1-3)[Ac(1-2)]bDGlcpN(1-2)aDManp(1-3)[bDGalp(1-3)[Ac(1-2)]bDGlcpN(1-2)aDManp(1-6)]bDManp(1-4)[Ac(1-2)]bDGlcpN(1-4)[Ac(1-2)]bDGlcpN1N(1-4)x?Asn Status: evidence in vitro
Confirmation methods: in vitro (purified protein) ID: 1745 Notes: AtFUT13 can transfer two or one aLFucp to both possible positions. | Organism (ID 12415): Arabidopsis thaliana Organ/tissue: leaf, flower, root Full structure (ID 35419): | ||
| Synthesized dimer: aLFuc(1-4)bDGlcpN Donor (ID 35398): ?LFucp(1-P-P-5)xXnucG Acceptor (ID 35420): aLFucp(1-3)[bDXylp(1-2)[Ac(1-2)bDGlcpN(1-2)aDManp(1-6),bDGalp(1-3)[Ac(1-2)]bDGlcpN(1-2)aDManp(1-3)]bDManp(1-4)[Ac(1-2)]bDGlcpN(1-4),Ac(1-2)]bDGlcpN1N(1-4)x?Asn Status: evidence in vitro
Confirmation methods: in vitro (purified protein) ID: 1746 | Organism (ID 12415): Arabidopsis thaliana Organ/tissue: leaf, flower, root Full structure (ID 35421): | ||
| Synthesized dimer: aLFuc(1-4)bDGlcpN Donor (ID 35398): ?LFucp(1-P-P-5)xXnucG Acceptor (ID 35422): aLFucp(1-3)[bDXylp(1-2)[bDGalp(1-3)[Ac(1-2)]bDGlcpN(1-2)aDManp(1-6),Ac(1-2)bDGlcpN(1-2)aDManp(1-3)]bDManp(1-4)[Ac(1-2)]bDGlcpN(1-4),Ac(1-2)]bDGlcpN1N(1-4)x?Asn Status: evidence in vitro
Confirmation methods: in vitro (purified protein) ID: 1747 | Organism (ID 12415): Arabidopsis thaliana Organ/tissue: leaf, flower, root Full structure (ID 35423): | ||
| Synthesized dimer: aLFuc(1-4)bDGlcpN Donor (ID 35398): ?LFucp(1-P-P-5)xXnucG Acceptor (ID 35424): aLFucp(1-3)[bDXylp(1-2)[bDGalp(1-3)[Ac(1-2)]bDGlcpN(1-2)aDManp(1-6),bDGalp(1-3)[Ac(1-2)]bDGlcpN(1-2)aDManp(1-3)]bDManp(1-4)[Ac(1-2)]bDGlcpN(1-4),Ac(1-2)]bDGlcpN1N(1-4)x?Asn Status: evidence in vitro
Confirmation methods: in vitro (purified protein) ID: 1748 Notes: AtFUT13 can transfer two or one aLFucp to both possible positions. | Organism (ID 12415): Arabidopsis thaliana Organ/tissue: leaf, flower, root Full structure (ID 35425): | ||
| Enzyme name: GALS1 UniProt ID: O22807.2 CAZy family: GT92 Gene name: AT2G33570 Gene GenBank ID: 817922 | Synthesized dimer: bDGalp(1-4)bDGalp Donor (ID 35273): ?DGalp(1-P-P-5)xXnucU Acceptor (ID 35426): bDGalp(1-4)bDGalp(1-4)bDGalp(1-4)bDGalp(1-4)bDGalp Status: direct evidence in vivo
Confirmation methods: in vitro (purified protein), overexpression, mutation ID: 1749 | Organism (ID 12415): Arabidopsis thaliana Organ/tissue: leaf, flower, stem, silique Full structure (ID 35427): | Liwanag et al. 2012 DOI: 10.1105/tpc.112.106625 |
| Synthesized dimer: bDGalp(1-4)bDGalp Donor (ID 35273): ?DGalp(1-P-P-5)xXnucU Acceptor (ID 35428): bDGalp(1-4)bDGalp(1-4)bDGalp(1-4)bDGalp(1-4)bDGalp(1-4)bDGalp Status: direct evidence in vivo
Confirmation methods: in vitro (purified protein), overexpression, mutation ID: 1750 | Organism (ID 12415): Arabidopsis thaliana Organ/tissue: leaf, flower, stem, silique Full structure (ID 35429): | ||
| Synthesized dimer: bDGalp(1-4)bDGalp Donor (ID 35273): ?DGalp(1-P-P-5)xXnucU Acceptor (ID 35430): bDGalp(1-4)bDGalp(1-4)bDGalp(1-4)bDGalp(1-4)bDGalp(1-4)bDGalp(1-4)bDGalp Status: direct evidence in vivo
Confirmation methods: in vitro (purified protein), overexpression, mutation ID: 1751 | Organism (ID 12415): Arabidopsis thaliana Organ/tissue: leaf, flower, stem, silique Full structure (ID 35431): | ||
| Synthesized dimer: bDGalp(1-4)bDGalp Donor (ID 35273): ?DGalp(1-P-P-5)xXnucU Acceptor (ID 35432): bDGalp(1-4)bDGalp(1-4)bDGalp(1-4)bDGalp(1-4)bDGalp(1-4)bDGalp(1-4)bDGalp(1-4)bDGalp Status: direct evidence in vivo
Confirmation methods: in vitro (purified protein), overexpression, mutation ID: 1752 | Organism (ID 12415): Arabidopsis thaliana Organ/tissue: leaf, flower, stem, silique Full structure (ID 35433): | ||
| Enzyme name: GALT1 UniProt ID: Q8L7F9.1 CAZy family: GT31 Gene name: GALT1 / At1g26810 Gene GenBank ID: 839224 | Synthesized dimer: bDGalp(1-3)bDGlcpN Donor (ID 35273): ?DGalp(1-P-P-5)xXnucU Acceptor (ID 35374): Ac(1-2)bDGlcpN(1-2)aDManp(1-3)[Ac(1-2)bDGlcpN(1-2)aDManp(1-6)]bDManp(1-4)[Ac(1-2)]bDGlcpN(1-4)[Ac(1-2)]bDGlcpN1N(1-4)x?Asn Status: direct evidence in vivo
Confirmation methods: in vitro (purified protein), mutation, overexpression ID: 1753 Notes: GALT1 is capable of in vivo autogalactosylation. | Organism (ID 12415): Arabidopsis thaliana Organ/tissue: leaf, silique, stem Exact full structure is unknown | Strasser et al. 2007 DOI: 10.1105/tpc.107.052985 |
| Synthesized dimer: bDGalp(1-3)bDGlcpN Donor (ID 35273): ?DGalp(1-P-P-5)xXnucU Acceptor (ID 35374): Ac(1-2)bDGlcpN(1-2)aDManp(1-3)[Ac(1-2)bDGlcpN(1-2)aDManp(1-6)]bDManp(1-4)[Ac(1-2)]bDGlcpN(1-4)[Ac(1-2)]bDGlcpN1N(1-4)x?Asn Status: direct evidence in vivo
Confirmation methods: in vitro (purified protein), mutation, overexpression ID: 1754 Notes: GALT1 is capable of in vivo autogalactosylation. | Organism (ID 12415): Arabidopsis thaliana Organ/tissue: leaf, silique, stem Exact full structure is unknown | ||
| Synthesized dimer: bDGalp(1-3)bDGlcpN Donor (ID 35273): ?DGalp(1-P-P-5)xXnucU Acceptor (ID 35374): Ac(1-2)bDGlcpN(1-2)aDManp(1-3)[Ac(1-2)bDGlcpN(1-2)aDManp(1-6)]bDManp(1-4)[Ac(1-2)]bDGlcpN(1-4)[Ac(1-2)]bDGlcpN1N(1-4)x?Asn Status: direct evidence in vivo
Confirmation methods: in vitro (purified protein), mutation, overexpression ID: 1755 Notes: GALT1 is capable of in vivo autogalactosylation. GALT1 can transfer bDGalp at both b-D-GlcpNAc-(1-2)-a-D-Manp chains; the order or transfer is undefined. | Organism (ID 12415): Arabidopsis thaliana Organ/tissue: leaf, silique, stem Exact full structure is unknown | ||
| Synthesized dimer: bDGalp(1-3)bDGlcpN Donor (ID 35273): ?DGalp(1-P-P-5)xXnucU Acceptor (ID 35434): aLFucp(1-3)[bDXylp(1-2)[Ac(1-2)bDGlcpN(1-2)aDManp(1-6),Ac(1-2)bDGlcpN(1-2)aDManp(1-3)]bDManp(1-4)[Ac(1-2)]bDGlcpN(1-4),Ac(1-2)]bDGlcpN1N(1-4)x?Asn Status: direct evidence in vivo
Confirmation methods: in vitro (purified protein), mutation, overexpression ID: 1756 Notes: GALT1 is capable of in vivo autogalactosylation. | Organism (ID 12415): Arabidopsis thaliana Organ/tissue: leaf, silique, stem Exact full structure is unknown | ||
| Synthesized dimer: bDGalp(1-3)bDGlcpN Donor (ID 35273): ?DGalp(1-P-P-5)xXnucU Acceptor (ID 35434): aLFucp(1-3)[bDXylp(1-2)[Ac(1-2)bDGlcpN(1-2)aDManp(1-6),Ac(1-2)bDGlcpN(1-2)aDManp(1-3)]bDManp(1-4)[Ac(1-2)]bDGlcpN(1-4),Ac(1-2)]bDGlcpN1N(1-4)x?Asn Status: direct evidence in vivo
Confirmation methods: in vitro (purified protein), mutation, overexpression ID: 1757 Notes: GALT1 is capable of in vivo autogalactosylation. | Organism (ID 12415): Arabidopsis thaliana Organ/tissue: leaf, silique, stem Exact full structure is unknown | ||
| Synthesized dimer: bDGalp(1-3)bDGlcpN Donor (ID 35273): ?DGalp(1-P-P-5)xXnucU Acceptor (ID 35434): aLFucp(1-3)[bDXylp(1-2)[Ac(1-2)bDGlcpN(1-2)aDManp(1-6),Ac(1-2)bDGlcpN(1-2)aDManp(1-3)]bDManp(1-4)[Ac(1-2)]bDGlcpN(1-4),Ac(1-2)]bDGlcpN1N(1-4)x?Asn Status: direct evidence in vivo
Confirmation methods: in vitro (purified protein), mutation, overexpression ID: 1758 Notes: GALT1 is capable of in vivo autogalactosylation. GALT1 can transfer bDGalp at both b-D-GlcpNAc-(1-2)-a-D-Manp chains; the order or transfer is undefined. | Organism (ID 12415): Arabidopsis thaliana Organ/tissue: leaf, silique, stem, seedling, inflorescence, root Exact full structure is unknown | Strasser et al. 2007 DOI: 10.1105/tpc.107.052985 Basu et al. 2015a DOI: 10.1371/journal.pone.0125624 | |
| Enzyme name: GALT2 UniProt ID: A7XDQ9.1 CAZy family: GT31 Gene name: At4g21060 Gene GenBank ID: 827853 | Synthesized dimer: DGalp(1-4)Hyp Donor (ID 35273): ?DGalp(1-P-P-5)xXnucU Acceptor (ID 35435): x?Ala?(1-2)x?Hyp?(1-2)x?Ala?(1-2)x?Hyp?(1-2)x?Ala?(1-2)x?Hyp?(1-2)x?Ala?(1-2)x?Hyp?(1-2)x?Ala?(1-2)x?Hyp?(1-2)x?Ala?(1-2)x?Hyp?(1-2)x?Ala?(1-2)x?Hyp? Status: evidence in vitro
Confirmation methods: in vitro (microsomal membrane preparation) ID: 1759 Notes: The amount of the incorporated DGalp is undefined. Activity is specific for atabinogalactan protein sequences containing non-contiguous peptidyl Hyp. | Organism (ID 12415): Arabidopsis thaliana Organ/tissue: seedling, root, stem, inflorescence, silique, leaf Exact full structure is unknown | Basu et al. 2015a DOI: 10.1371/journal.pone.0125624 Basu et al. 2013 DOI: 10.1074/jbc.M112.432609 |
| Enzyme name: GALT3 UniProt ID: Q9ASW1.1 CAZy family: GT31 Gene name: At3g06440 Gene GenBank ID: 819820 | Synthesized dimer: DGalp(1-4)Hyp Donor (ID 35273): ?DGalp(1-P-P-5)xXnucU Acceptor (ID 35435): x?Ala?(1-2)x?Hyp?(1-2)x?Ala?(1-2)x?Hyp?(1-2)x?Ala?(1-2)x?Hyp?(1-2)x?Ala?(1-2)x?Hyp?(1-2)x?Ala?(1-2)x?Hyp?(1-2)x?Ala?(1-2)x?Hyp?(1-2)x?Ala?(1-2)x?Hyp? Status: evidence in vitro
Confirmation methods: in vitro (microsomal membrane preparation) ID: 1760 Notes: The amount of the incorporated DGalp is undefined. Activity is specific for atabinogalactan protein sequences containing non-contiguous peptidyl Hyp. | Organism (ID 12415): Arabidopsis thaliana Organ/tissue: seedling, root, stem, inflorescence, silique, leaf Exact full structure is unknown | Basu et al. 2015b DOI: 10.1186/s12870-015-0670-7 |
| Enzyme name: GALT4 UniProt ID: Q8GXG6.2 CAZy family: GT31 Gene name: At1g27120 Gene GenBank ID: 839601 | Synthesized dimer: DGalp(1-4)Hyp Donor (ID 35273): ?DGalp(1-P-P-5)xXnucU Acceptor (ID 35435): x?Ala?(1-2)x?Hyp?(1-2)x?Ala?(1-2)x?Hyp?(1-2)x?Ala?(1-2)x?Hyp?(1-2)x?Ala?(1-2)x?Hyp?(1-2)x?Ala?(1-2)x?Hyp?(1-2)x?Ala?(1-2)x?Hyp?(1-2)x?Ala?(1-2)x?Hyp? Status: evidence in vitro
Confirmation methods: in vitro (microsomal membrane preparation) ID: 1761 Notes: The amount of the incorporated DGalp is undefined. Activity is specific for atabinogalactan protein sequences containing non-contiguous peptidyl Hyp. | Organism (ID 12415): Arabidopsis thaliana Organ/tissue: seedling, root, stem, inflorescence, silique, leaf Exact full structure is unknown | |
| Enzyme name: GALT5 UniProt ID: Q8RX55.1 CAZy family: GT31 Gene name: At1g74800 Gene GenBank ID: 843819 | Synthesized dimer: DGalp(1-4)Hyp Donor (ID 35273): ?DGalp(1-P-P-5)xXnucU Acceptor (ID 35435): x?Ala?(1-2)x?Hyp?(1-2)x?Ala?(1-2)x?Hyp?(1-2)x?Ala?(1-2)x?Hyp?(1-2)x?Ala?(1-2)x?Hyp?(1-2)x?Ala?(1-2)x?Hyp?(1-2)x?Ala?(1-2)x?Hyp?(1-2)x?Ala?(1-2)x?Hyp? Status: evidence in vitro
Confirmation methods: in vitro (microsomal membrane preparation) ID: 1762 Notes: The amount of the incorporated DGalp is undefined. Activity is specific for atabinogalactan protein sequences containing non-contiguous peptidyl Hyp. | Organism (ID 12415): Arabidopsis thaliana Organ/tissue: seedling, root, stem, inflorescence, silique, leaf Exact full structure is unknown | Basu et al. 2015a DOI: 10.1371/journal.pone.0125624 Basu et al. 2015b DOI: 10.1186/s12870-015-0670-7 |
| Enzyme name: GALT6 UniProt ID: Q9LV16.2 CAZy family: GT31 Gene name: At5g62620 Gene GenBank ID: 836383 | Synthesized dimer: DGalp(1-4)Hyp Donor (ID 35273): ?DGalp(1-P-P-5)xXnucU Acceptor (ID 35435): x?Ala?(1-2)x?Hyp?(1-2)x?Ala?(1-2)x?Hyp?(1-2)x?Ala?(1-2)x?Hyp?(1-2)x?Ala?(1-2)x?Hyp?(1-2)x?Ala?(1-2)x?Hyp?(1-2)x?Ala?(1-2)x?Hyp?(1-2)x?Ala?(1-2)x?Hyp? Status: evidence in vitro
Confirmation methods: in vitro (microsomal membrane preparation) ID: 1763 Notes: The amount of the incorporated DGalp is undefined. Activity is specific for atabinogalactan protein sequences containing non-contiguous peptidyl Hyp. | Organism (ID 12415): Arabidopsis thaliana Organ/tissue: seedling, root, stem, inflorescence, silique, leaf Exact full structure is unknown | Basu et al. 2015b DOI: 10.1186/s12870-015-0670-7 |
| Enzyme name: GALT29A UniProt ID: Q9SGD2.1 CAZy family: GT29 Gene name: At1g08280 Gene GenBank ID: 837348 | Synthesized dimer: bDGalp(1-6)bDGalp Donor (ID 35273): ?DGalp(1-P-P-5)xXnucU Acceptor (ID 29079): -3)bDGalp(1- Status: evidence in vitro
Confirmation methods: in vitro (purified protein) ID: 1764 Notes: GALT29A elongates β-1,6-galactan side chains and forms 6-Gal branches on the β-1,3-galactan main chain of arabinogalactan proteins. | Organism (ID 12415): Arabidopsis thaliana Full structure (ID 25732): CSDB ID(s): 115030, 146891, 146893, 295133 | Dilokpimol et al. 2014 DOI: 10.1186/1471-2229-14-90 |
| Synthesized dimer: bDGalp(1-6)bDGalp Donor (ID 35273): ?DGalp(1-P-P-5)xXnucU Acceptor (ID 35437): -6)bDGalp(1- Status: evidence in vitro
Confirmation methods: in vitro (purified protein) ID: 1765 Notes: GALT29A elongates β-1,6-galactan side chains and forms 6-Gal branches on the β-1,3-galactan main chain of arabinogalactan proteins. | Organism (ID 12415): Arabidopsis thaliana Full structure (ID 4663): CSDB ID(s): 6473, 27715, 28814, 66465, 108568, 117950, 210048 | ||
| Enzyme name: GALT31A UniProt ID: Q9MAP8.1 CAZy family: GT31 Gene name: AT1G32930 Gene GenBank ID: 840187 | Synthesized dimer: bDGalp(1-6)bDGalp Donor (ID 35273): ?DGalp(1-P-P-5)xXnucU Acceptor (ID 35438): bDGalp(1-6)bDGalp(1-6)bDGalp Status: direct evidence in vivo
Confirmation methods: in vitro (purified protein), complementation ID: 1766 Notes: GALT31A elongates β-1,6-galactan side chains. | Organism (ID 12415): Arabidopsis thaliana Full structure (ID 35439): | Geshi et al. 2013 DOI: 10.1111/tpj.12281 |
| Enzyme name: GAUT1 UniProt ID: Q9LE59.1 CAZy family: GT8 Gene name: GAUT1 / At3g61130 Gene GenBank ID: 825285 | Synthesized dimer: aDGalpA(1-4)aDGalpA Donor (ID 35440): ?DGalpA(1-P-P-5)xXnucU Acceptor (ID 35441): -4)aDGalpA(1- Status: evidence in vitro
Confirmation methods: in vitro (immunoprecipitate from Arabidopsis suspension-cultured cells) ID: 1767 Notes: In the substrate n = 13; in the product n = 14-21 | Organism (ID 12415): Arabidopsis thaliana Organ/tissue: flower, root, stem, leaf, inflorescence Full structure (ID 23322): CSDB ID(s): 101354, 112961, 112968, 112989, 113020, 117335, 117336, 117819, 134319, 137955, 138795, 145249, 146919, 146939, 146992, 147102, 148982 | Sterling et al. 2006 DOI: 10.1073_pnas.0600120103 Caffall et al. 2009 DOI: 10.1093/mp/ssp062 |
| Enzyme name: GAUT12 UniProt ID: Q9FH36.1 CAZy family: GT8 Gene name: GAUT12 / IRX8 / AT5G54690 Gene GenBank ID: 835558 | Synthesized dimer: aDGalpA(1-4)DXylp Donor (ID 35440): ?DGalpA(1-P-P-5)xXnucU Status: indirect evidence in vivo
Confirmation methods: mutation ID: 1768 Notes: The activity is predicted according to the mutation studies. GAUT12 possibly participates in the synthesis of bDXylp(1-4)bDXylp(1-3)aLRhap(1-2)aDGalpA(1-4)?DXylp, which is found at the reducing end of Arabidopsis glucuronoxylan. | Organism (ID 12415): Arabidopsis thaliana Organ/tissue: Inflorescence, silique, stem Exact full structure is unknown | Caffall et al. 2009 DOI: 10.1093/mp/ssp062 Pena et al. 2007 DOI: 10.1105/tpc.106.049320 Persson et al. 2007 DOI: 10.1105/tpc.106.047720 |
| Enzyme name: GnTI UniProt ID: Q9XGM8.1 CAZy family: GT13 Gene name: CGL1 / AT4G38240 Gene GenBank ID: 829981 | Synthesized dimer: bDGlcpN(1-2)aDManp Donor (ID 35226): Ac(1-2)?DGlcpN(1-P-P-5)xXnucU Acceptor (ID 35443): aDManp(1-3)[aDManp(1-3)[aDManp(1-6)]aDManp(1-6)]bDManp(1-4)[Ac(1-2)]bDGlcpN(1-4)[Ac(1-2)]bDGlcpN1N(1-4)x?Asn Status: direct evidence in vivo
Confirmation methods: in vitro (crude extract), mutation, complementation in CHO cells ID: 1769 Notes: Suggested activity in planta. | Organism (ID 12415): Arabidopsis thaliana Exact full structure is unknown | Yoo et al. 2015 DOI: 10.1074/jbc.M115.653162 Bencur et al. 2005 DOI: 10.1042/BJ20042091 Strasser et al. 2005 DOI: 10.1042/BJ20041686 von Schaewen et al. 1993 DOI: 10.1104/pp.102.4.1109 Bakker et al. 1999 DOI: 10.1006/bbrc.1999.1117 |
| Enzyme name: GnTII Gene name: AT2G05320 Gene GenBank ID: 815080 | Synthesized dimer: bDGlcpN(1-2)aDManp Donor (ID 35226): Ac(1-2)?DGlcpN(1-P-P-5)xXnucU Acceptor (ID 35380): Ac(1-2)bDGlcpN(1-2)aDManp(1-3)[aDManp(1-6)]bDManp(1-4)[Ac(1-2)]bDGlcpN(1-4)[Ac(1-2)]bDGlcpN1N(1-4)x?Asn Status: direct evidence in vivo
Confirmation methods: in vitro (crude extract), mutation ID: 1770 Notes: Suggested activity in planta. Because the addition of the 6-arm 1,2-GlcNAc residue by GnTII is less efficient than the additions of the core 1,2-xylose and 1,3-fucose residues by XylT, FucTA, and FucTB, the amount of the N-glycan with GlcNAcMan3XylFuc(GlcNAc)2 structure is greater than that with (GlcNAc)2Man3XylFuc(GlcNAc)2 structure in plants (see Yoo et al. 2015 (10.1074/jbc.M115.653162)). | Organism (ID 12415): Arabidopsis thaliana Exact full structure is unknown | Yoo et al. 2015 DOI: 10.1074/jbc.M115.653162 Bencur et al. 2005 DOI: 10.1042/BJ20042091 Strasser et al. 1999 DOI: 10.1023/A:1007127815012 |
| Enzyme name: GUX1 UniProt ID: Q9LSB1.1 CAZy family: GT8 Gene name: PGSIP1 / AT3G18660 Gene GenBank ID: 821397 | Synthesized dimer: aDGlcpA(1-2)bDXylp Donor (ID 35444): ?DGlcpA(1-P-P-5)xXnucU Acceptor (ID 35445): bDXylp(1-4)bDXylp(1-4)bDXylp(1-4)bDXylp(1-4)bDXylp(1-4)bDXylp Status: evidence in vitro
Confirmation methods: in vitro (purified protein) ID: 1771 Notes: GUX1 is able to transfer DGlcpA to -4)bDXylp(1- with n = 2-6. In planta, GUX1 decorates xylan with a preference for addition of [Me]GlcA at evenly spaced xylosyl residues. Intervals of eight or 10 residues dominate, but larger intervals are observed. GUX2, in contrast, produces more tightly clustered decorations with most frequent spacing of five, six or seven xylosyl residues, with no preference for odd or even spacing. The origin of methyl groups at GlcpA is unknown. | Organism (ID 12415): Arabidopsis thaliana Full structure (ID 35446): | Rennie et al. 2012 DOI: 10.1104/pp.112.200964 |
| Synthesized dimer: aDGlcpA(1-2)bDXylp Donor (ID 35444): ?DGlcpA(1-P-P-5)xXnucU Acceptor (ID 35445): bDXylp(1-4)bDXylp(1-4)bDXylp(1-4)bDXylp(1-4)bDXylp(1-4)bDXylp Status: evidence in vitro
Confirmation methods: in vitro (purified protein) ID: 1772 Notes: GUX1 is able to transfer DGlcpA to -4)bDXylp(1- with n = 2-6. In planta, GUX1 decorates xylan with a preference for addition of [Me]GlcA at evenly spaced xylosyl residues. Intervals of eight or 10 residues dominate, but larger intervals are observed. GUX2, in contrast, produces more tightly clustered decorations with most frequent spacing of five, six or seven xylosyl residues, with no preference for odd or even spacing. The origin of methyl groups at GlcpA is unknown. | Organism (ID 12415): Arabidopsis thaliana Full structure (ID 35447): | Rennie et al. 2012 DOI: 10.1104/pp.112.200964 Mortimer et al. 2010 DOI: 10.1073/pnas.1005456107 Bromley et al. 2013 DOI: 10.1111/tpj.12135 | |
| Enzyme name: GUX2 UniProt ID: Q8GWW4.1 CAZy family: GT8 Gene name: PGSIP3 / AT4G33330 Gene GenBank ID: 829469 | Synthesized dimer: aDGlcpA(1-2)bDXylp Donor (ID 35444): ?DGlcpA(1-P-P-5)xXnucU Acceptor (ID 35445): bDXylp(1-4)bDXylp(1-4)bDXylp(1-4)bDXylp(1-4)bDXylp(1-4)bDXylp Status: evidence in vitro
Confirmation methods: in vitro (microsomal membrane preparation) ID: 1773 Notes: The position of transfer is undefined. In planta, GUX1 decorates xylan with a preference for addition of [Me]GlcA at evenly spaced xylosyl residues. Intervals of eight or 10 residues dominate, but larger intervals are observed. GUX2, in contrast, produces more tightly clustered decorations with most frequent spacing of five, six or seven xylosyl residues, with no preference for odd or even spacing. The origin of methyl groups at GlcpA is unknown. | Organism (ID 12415): Arabidopsis thaliana Exact full structure is unknown | |
| Enzyme name: GUX4 UniProt ID: Q9FZ37.1 CAZy family: GT8 Gene name: PGSIP4 / AT1G54940 Gene GenBank ID: 841934 | Synthesized dimer: aDGlcpA(1-2)bDXylp Donor (ID 35444): ?DGlcpA(1-P-P-5)xXnucU Acceptor (ID 35445): bDXylp(1-4)bDXylp(1-4)bDXylp(1-4)bDXylp(1-4)bDXylp(1-4)bDXylp Status: evidence in vitro
Confirmation methods: in vitro (microsomal membrane preparation) ID: 1774 Notes: The position of transfer is undefined. | Organism (ID 12415): Arabidopsis thaliana Exact full structure is unknown | Rennie et al. 2012 DOI: 10.1104/pp.112.200964 |
| Enzyme name: HPAT1 Gene name: At5g25265 Gene GenBank ID: 832598 | Synthesized dimer: bLAraf(1-4)Hyp Donor (ID 35449): bLAraf(1-P-P-5)xXnucU Acceptor (ID 35450): x?Ala?(1-2)x?Ala?(1-2)x?Ala?(1-2)x?Ala?(1-2)x?Ala?(1-2)x?Ala?(1-2)x?Pro(1-2)xXGly(1-2)x?Val(1-2)x?Hyp?(1-2)x?Hyp?(1-2)x?Ser Status: evidence in vitro
Confirmation methods: in vitro (microsomal membrane preparation) ID: 1775 Notes: HPAT1, HPAT2 and HPAT3 redundantly contribute to arabinosylation of EXT3. | Organism (ID 12415): Arabidopsis thaliana Organ/tissue: seedling, root, leaf, stem, flower bud, flower, silique Full structure (ID 35451): | Ogawa-Ohnishi et al. 2013 DOI: 10.1038/nchembio.1351 |
| Synthesized dimer: bLAraf(1-4)Hyp Donor (ID 35449): bLAraf(1-P-P-5)xXnucU Acceptor (ID 35452): x?Pro(1-2)xXGly(1-2)x?Val(1-2)x?Hyp?(1-2)x?Hyp?(1-2)x?Ser(1-2)x?Pro(1-2)xXGly(1-2)x?Val(1-2)x?Hyp?(1-2)x?Hyp?(1-2)x?Ser(1-2)x?Pro(1-2)xXGly(1-2)x?Val(1-2)x?Hyp?(1-2)x?Hyp?(1-2)x?Ser Status: evidence in vitro
Confirmation methods: in vitro (microsomal membrane preparation), mutation ID: 1776 Notes: HPAT1, HPAT2 and HPAT3 redundantly contribute to arabinosylation of EXT3. | Organism (ID 12415): Arabidopsis thaliana Organ/tissue: seedling, root, leaf, stem, flower bud, flower, silique Full structure (ID 35453): | ||
| Enzyme name: HPAT2 Gene name: At2g25260 Gene GenBank ID: 817064 | Synthesized dimer: bLAraf(1-4)Hyp Donor (ID 35449): bLAraf(1-P-P-5)xXnucU Acceptor (ID 35452): x?Pro(1-2)xXGly(1-2)x?Val(1-2)x?Hyp?(1-2)x?Hyp?(1-2)x?Ser(1-2)x?Pro(1-2)xXGly(1-2)x?Val(1-2)x?Hyp?(1-2)x?Hyp?(1-2)x?Ser(1-2)x?Pro(1-2)xXGly(1-2)x?Val(1-2)x?Hyp?(1-2)x?Hyp?(1-2)x?Ser Status: evidence in vitro
Confirmation methods: in vitro (microsomal membrane preparation), mutation ID: 1777 Notes: HPAT1, HPAT2 and HPAT3 redundantly contribute to arabinosylation of EXT3. | Organism (ID 12415): Arabidopsis thaliana Organ/tissue: seedling, root, leaf, stem, flower bud, flower Full structure (ID 35453): | |
| Enzyme name: HPAT3 Gene name: At5g13500 Gene GenBank ID: 831194 | Synthesized dimer: bLAraf(1-4)Hyp Donor (ID 35449): bLAraf(1-P-P-5)xXnucU Acceptor (ID 35452): x?Pro(1-2)xXGly(1-2)x?Val(1-2)x?Hyp?(1-2)x?Hyp?(1-2)x?Ser(1-2)x?Pro(1-2)xXGly(1-2)x?Val(1-2)x?Hyp?(1-2)x?Hyp?(1-2)x?Ser(1-2)x?Pro(1-2)xXGly(1-2)x?Val(1-2)x?Hyp?(1-2)x?Hyp?(1-2)x?Ser Status: evidence in vitro
Confirmation methods: in vitro (microsomal membrane preparation), mutation ID: 1778 Notes: HPAT1, HPAT2 and HPAT3 redundantly contribute to arabinosylation of EXT3. HAPT3 contributes to arabinosylation of CLE peptides. | Organism (ID 12415): Arabidopsis thaliana Organ/tissue: seedling, root, leaf, stem, flower bud, flower, silique Full structure (ID 35453): | |
| Enzyme name: IPUT1 UniProt ID: Q8GWB7.1 CAZy family: GT8 Gene name: AT5G18480 Gene GenBank ID: 831966 | Synthesized dimer: aDGlcpA(1-4)INO Donor (ID 35444): ?DGlcpA(1-P-P-5)xXnucU Acceptor (ID 35454): INO(1-P-1)CER Status: direct evidence in vivo
Confirmation methods: In vitro (as whole-cell biocatalyst), mutation ID: 1779 | Organism (ID 12415): Arabidopsis thaliana Organ/tissue: seedling, root, leaf, stem, silique Full structure (ID 35455): | Rennie et al. 2014 DOI: 10.1105/tpc.114.129171 Tartaglio et al. 2017 DOI: 10.1111/tpj.13382 |
| Enzyme name: FRA8 / IRX7 UniProt ID: Q9ZUV3.1 CAZy family: GT47 Gene name: FRA8 / AT2G28110 Gene GenBank ID: 817357 | Synthesized dimer: aDGlcpA(1-2)bDXylp Status: indirect evidence in vivo
Confirmation methods: mutation ID: 1780 Notes: Suggested activity in planta; a part of an idealized xylan structure is shown. | Organism (ID 12415): Arabidopsis thaliana Organ/tissue: seedling, stem, leaf, root Full structure (ID 27747): CSDB ID(s): 61072, 61078, 61082, 61083 | Zhong et al. 2005 DOI: 10.1105/tpc.105.035501 Wu et al. 2010b DOI: 10.1104/pp.110.154971 Brown et al. 2007 DOI: 10.1111/j.1365-313X.2007.03307.x Lee et al. 2009 DOI: 10.1093/pcp/pcp025 |
| Synthesized dimer: aDGlcpA(1-2)bDXylp Status: indirect evidence in vivo
Confirmation methods: mutation ID: 1781 Notes: Suggested activity in planta; a part of an idealized xylan structure is shown. | Organism (ID 12415): Arabidopsis thaliana Organ/tissue: seedling, stem, leaf, root Full structure (ID 27748): CSDB ID(s): 61073 | ||
| Enzyme name: F8H UniProt ID: Q6NMM8.1 CAZy family: GT47 Gene name: F8H / AT5G22940 Gene GenBank ID: 832358 | Synthesized dimer: aDGlcpA(1-2)bDXylp Status: indirect evidence in vivo
Confirmation methods: overespression, complementation ID: 1782 Notes: Suggested activity in planta; a part of an idealized xylan structure is shown. F8H is a possible functional homolog of FRA8. | Organism (ID 12415): Arabidopsis thaliana Organ/tissue: seedling, leaf, stem, flower, root Full structure (ID 27747): CSDB ID(s): 61072, 61078, 61082, 61083 | Wu et al. 2010b DOI: 10.1104/pp.110.154971 Lee et al. 2009 DOI: 10.1093/pcp/pcp025 |
| Enzyme name: IRX9 UniProt ID: Q9ZQC6.1 CAZy family: GT43 Gene name: IRX9 / AT2G37090 Gene GenBank ID: 818285 | Synthesized dimer: bDXylp(1-4)bDXylp Donor (ID 35290): ?DXylp(1-P-P-5)xXnucU Acceptor (ID 35456): bDXylp(1-4)bDXylp(1-4)bDXylp(1-4)bDXylp(1-4)bDXylp(1-4)xDXyl1N-ol(1-2)xX2NBz Status: evidence in vitro
Confirmation methods: in vitro (microsomal membrane preparation), mutation ID: 1783 Notes: IRX9 adds up to 6 Xylp residues to the model substrate. In Fig. 4 Xyl1N-ol residue is erroneously depicted as Lyx1N-ol | Organism (ID 12415): Arabidopsis thaliana Organ/tissue: stem, root, flower Full structure (ID 35457): | Pena et al. 2007 DOI: 10.1105/tpc.106.049320 Brown et al. 2007 DOI: 10.1111/j.1365-313X.2007.03307.x Lee et al. 2007 DOI: 10.1093/pcp/pcm135 Chong et al. 2015 DOI: 10.1016/j.ijbiomac.2015.05.056 Ren et al. 2014 DOI: 10.1371/journal.pone.0105014 Lee et al. 2012 DOI: 10.1093/pcp/pcr158 Lee et al. 2010 DOI: 10.1104/pp.110.155309 |
| Enzyme name: IRX9L / IRX9H UniProt ID: Q9SXC4.2 CAZy family: GT43 Gene name: IRX9L / AT1G27600 Gene GenBank ID: 839652 | Synthesized dimer: bDXylp(1-4)bDXylp Donor (ID 35290): ?DXylp(1-P-P-5)xXnucU Status: indirect evidence in vivo
Confirmation methods: overespression, complementation ID: 1784 Notes: Suggested activity in planta; overexpression of IRX9H complements the irx9 mutant defects. | Organism (ID 12415): Arabidopsis thaliana Organ/tissue: leaf, flower, root, stem, polen Exact full structure is unknown | Wu et al. 2010b DOI: 10.1104/pp.110.154971 Ren et al. 2014 DOI: 10.1371/journal.pone.0105014 Lee et al. 2010 DOI: 10.1104/pp.110.155309 Li et al. 2016a DOI: 10.1104/pp.16.00471 |
| Enzyme name: IRX10 UniProt ID: Q9FZJ1.1 CAZy family: GT47 Gene name: GUT2 / IRX10 / AT1G27440 Gene GenBank ID: 839635 | Synthesized dimer: bDXylp(1-4)bDXylp Donor (ID 35290): ?DXylp(1-P-P-5)xXnucU Acceptor (ID 29137): bDXylp(1-4)bDXylp(1-4)bDXylp(1-4)bDXylp Status: direct evidence in vivo
Confirmation methods: in vitro (purified protein), mutation, double mutation with IRX10L ID: 1785 | Organism (ID 12415): Arabidopsis thaliana Organ/tissue: root, leaf, stem Full structure (ID 21440): CSDB ID(s): 49516, 49520 | Jensen et al. 2014 DOI: 10.1111/tpj.12641 Brown et al. 2009 DOI: 10.1111/j.1365-313X.2008.03729.x Wu et al. 2009 DOI: 10.1111/j.1365-313X.2008.03724.x Ubeda-Tomas et al. 2007 DOI: 10.1111/j.1399-3054.2006.00817.x |
| Enzyme name: IRX10L UniProt ID: Q940Q8.1 CAZy family: GT47 Gene name: GUT1 / AT5G61840 Gene GenBank ID: 836306 | Synthesized dimer: bDXylp(1-4)bDXylp Donor (ID 34956): aDXylp(1-P-P-5)xXnucU Acceptor (ID 35445): bDXylp(1-4)bDXylp(1-4)bDXylp(1-4)bDXylp(1-4)bDXylp(1-4)bDXylp Status: evidence in vitro
Confirmation methods: double mutation with IRX10L, in vitro (putified protein) ID: 1786 Notes: IRX10L adds up to 7 Xylp residues to the model substrate. | Organism (ID 12415): Arabidopsis thaliana Organ/tissue: root, leaf, shoot, stem Full structure (ID 35459): | Brown et al. 2009 DOI: 10.1111/j.1365-313X.2008.03729.x Wu et al. 2009 DOI: 10.1111/j.1365-313X.2008.03724.x Urbanowicz et al. 2014 DOI: 10.1111/tpj.12643 |
| Enzyme name: IRX14 UniProt ID: Q8L707.1 CAZy family: GT43 Gene name: IRX14 / AT4G36890 Gene GenBank ID: 829842 | Synthesized dimer: bDXylp(1-4)bDXylp Donor (ID 35290): ?DXylp(1-P-P-5)xXnucU Status: direct evidence in vivo
Confirmation methods: mutation, coerxpression with IRX9, in vitro (microsomal membrane preparation) ID: 1787 Notes: Successive incorporation of xylosyl residues into the beta-1,4(Xyl)4 acceptor requires co-expression of IRX9 and IRX14. | Organism (ID 12415): Arabidopsis thaliana Organ/tissue: leaf, flower, silique, seed, stem, root Exact full structure is unknown | Brown et al. 2007 DOI: 10.1111/j.1365-313X.2007.03307.x Lee et al. 2012 DOI: 10.1093/pcp/pcr158 Lee et al. 2010 DOI: 10.1104/pp.110.155309 Keppler et al. 2010 DOI: 10.1093/mp/ssq028 |
| Enzyme name: IRX14L / IRX14H UniProt ID: Q9FH90.1 CAZy family: GT43 Gene name: IRX14L / AT5G67230 Gene GenBank ID: 836858 | Synthesized dimer: bDXylp(1-4)bDXylp Donor (ID 35290): ?DXylp(1-P-P-5)xXnucU Status: indirect evidence in vivo
Confirmation methods: complementation ID: 1788 Notes: Suggested activity in planta; overexpression of I14H complemented the glucuronoxylan defects caused by the irx14 mutation. | Organism (ID 12415): Arabidopsis thaliana Organ/tissue: leaf, flower, silique, stem, root Exact full structure is unknown | Lee et al. 2010 DOI: 10.1104/pp.110.155309 Keppler et al. 2010 DOI: 10.1093/mp/ssq028 |
| Enzyme name: MURUS3 / KATAMARI1 UniProt ID: Q7XJ98.1 CAZy family: GT47 Gene name: MUR3 / AT2G20370 Gene GenBank ID: 816556 | Synthesized dimer: bDGalp(1-2)aDXylp Donor (ID 35273): ?DGalp(1-P-P-5)xXnucU Acceptor (ID 35460): aDXylp(1-6)bDGlcp(1-4)[aDXylp(1-6)]bDGlcp(1-4)[aDXylp(1-6)]bDGlcp(1-4)bDGlcp Status: direct evidence in vivo
Confirmation methods: mutation, in vitro (crude extract), complementation ID: 1789 Notes: Suggested activity in planta; a xyloglucan motif is shown. MURUS3 / KATAMARI1 participates in synthesis of aDXylp(1-6)bDGlcp(1-4)[aDXylp(1-6)]bDGlcp(1-4)[bDGalp(1-2)aDXylp(1-6)]bDGlcp(1-4)bDGlcp. | Organism (ID 12415): Arabidopsis thaliana Organ/tissue: Similar quantities throughout the plant Full structure (ID 23920): CSDB ID(s): 61048, 61087, 61124, 68686, 146932 | Chou et al. 2015 DOI: 10.1093/pcp/pcu161 Madson et al. 2003 DOI: 10.1105/tpc.009837 |
| Enzyme name: RAY1 UniProt ID: F4I6V0.1 CAZy family: GT77 Gene name: AT1G70630 Gene GenBank ID: 843400 | Synthesized dimer: bAraf(1-?)bDGalp Donor (ID 35461): ??Araf(1-P-P-5)xXnucU Acceptor (ID 35462): bDGalp(1-1)Me Status: evidence in vitro
Confirmation methods: in vitro (microsomal membrabe preparation) ID: 1790 | Organism (ID 12415): Arabidopsis thaliana Full structure (ID 35463): | Gille et al. 2013 DOI: 10.1093/mp/sst029 |
| Enzyme name: RHS8 UniProt ID: Q9SH31.1 CAZy family: GT47 Gene name: RHS8 / At1g63450 Gene GenBank ID: 842651 | Synthesized dimer: bDGalpA(1-2)aDXylp Status: indirect evidence in vivo
Confirmation methods: mutation, overexpression ID: 1791 | Organism (ID 12415): Arabidopsis thaliana Organ/tissue: root Full structure (ID 27730): CSDB ID(s): 61055 | Pena et al. 2012 DOI: 10.1105/tpc.112.103390 |
| Enzyme name: RGXT1 UniProt ID: Q9ZSJ2.1 CAZy family: GT77 Gene name: RGXT1 / AT4G01770 Gene GenBank ID: 828129 | Synthesized dimer: aDXylp(1-3)aLFucp Donor (ID 34956): aDXylp(1-P-P-5)xXnucU Acceptor (ID 35464): aLFucp(1-1)Me Status: evidence in vitro
Confirmation methods: in vitro (crude extract), in vitro (purified protein) ID: 1792 Notes: RGXT1 possibly participates in synthesis of -4)[aDGalpA(1-2)[bDGalpA(1-3),aDXylp(1-3)[aLGalp(1-2)bDGlcpA(1-4)]aLFucp(1-4)]bLRhap(1-3)bDApif(1-2)]aDGalpA(1- | Organism (ID 12415): Arabidopsis thaliana Organ/tissue: root, leaf, stem Full structure (ID 35465): | Egelund et al. 2006 DOI: 10.1105/tpc.105.036566 Peterson et al. 2009 DOI: 10.1007/s10719-009-9242-0 |
| Synthesized dimer: aDXylp(1-3)aLFucp Donor (ID 34956): aDXylp(1-P-P-5)xXnucU Acceptor (ID 35466): aLFucp(1-4)bLRhap(1-1)Me Status: evidence in vitro
Confirmation methods: in vitro (crude extract) ID: 1793 Notes: RGXT1 possibly participates in synthesis of -4)[aDGalpA(1-2)[bDGalpA(1-3),aDXylp(1-3)[aLGalp(1-2)bDGlcpA(1-4)]aLFucp(1-4)]bLRhap(1-3)bDApif(1-2)]aDGalpA(1- | Organism (ID 12415): Arabidopsis thaliana Organ/tissue: root, leaf, stem Full structure (ID 35467): | ||
| Synthesized dimer: aDXylp(1-3)aLFucp Donor (ID 34956): aDXylp(1-P-P-5)xXnucU Acceptor (ID 35468): aLFucp(1-4)aLRhap(1-1)Me Status: evidence in vitro
Confirmation methods: in vitro (crude extract) ID: 1794 Notes: RGXT1 possibly participates in synthesis of -4)[aDGalpA(1-2)[bDGalpA(1-3),aDXylp(1-3)[aLGalp(1-2)bDGlcpA(1-4)]aLFucp(1-4)]bLRhap(1-3)bDApif(1-2)]aDGalpA(1- | Organism (ID 12415): Arabidopsis thaliana Organ/tissue: root, leaf, stem Full structure (ID 35469): | ||
| Synthesized dimer: aDXylp(1-3)aLFucp Donor (ID 34956): aDXylp(1-P-P-5)xXnucU Acceptor (ID 35470): aLFucp(1-4)bLRhap Status: evidence in vitro
Confirmation methods: in vitro (crude extract) ID: 1795 Notes: RGXT1 possibly participates in synthesis of -4)[aDGalpA(1-2)[bDGalpA(1-3),aDXylp(1-3)[aLGalp(1-2)bDGlcpA(1-4)]aLFucp(1-4)]bLRhap(1-3)bDApif(1-2)]aDGalpA(1- | Organism (ID 12415): Arabidopsis thaliana Organ/tissue: root, leaf, stem Full structure (ID 35471): | ||
| Synthesized dimer: aDXylp(1-3)aLFucp Donor (ID 34956): aDXylp(1-P-P-5)xXnucU Acceptor (ID 35472): aLFucp(1-4)[Ac(1-2)]?DGlcpN Status: evidence in vitro
Confirmation methods: in vitro (crude extract) ID: 1796 Notes: RGXT1 possibly participates in synthesis of -4)[aDGalpA(1-2)[bDGalpA(1-3),aDXylp(1-3)[aLGalp(1-2)bDGlcpA(1-4)]aLFucp(1-4)]bLRhap(1-3)bDApif(1-2)]aDGalpA(1- | Organism (ID 12415): Arabidopsis thaliana Organ/tissue: root, leaf, stem Full structure (ID 35473): | ||
| Synthesized dimer: aDXylp(1-3)LFucp Donor (ID 34956): aDXylp(1-P-P-5)xXnucU Acceptor (ID 35474): ?LFucp Status: evidence in vitro
Confirmation methods: in vitro (crude extract) ID: 1797 Notes: RGXT1 possibly participates in synthesis of -4)[aDGalpA(1-2)[bDGalpA(1-3),aDXylp(1-3)[aLGalp(1-2)bDGlcpA(1-4)]aLFucp(1-4)]bLRhap(1-3)bDApif(1-2)]aDGalpA(1- | Organism (ID 12415): Arabidopsis thaliana Organ/tissue: root, leaf, stem Full structure (ID 35475): | ||
| Enzyme name: RGXT2 UniProt ID: Q9ZSJ0.1 CAZy family: GT77 Gene name: RGXT2 / AT4G01750 Gene GenBank ID: 827905 | Synthesized dimer: aDXylp(1-3)aLFucp Donor (ID 34956): aDXylp(1-P-P-5)xXnucU Acceptor (ID 35464): aLFucp(1-1)Me Status: evidence in vitro
Confirmation methods: in vitro (crude extract) ID: 1798 Notes: RGXT2 possibly participates in synthesis of -4)[aDGalpA(1-2)[bDGalpA(1-3),aDXylp(1-3)[aLGalp(1-2)bDGlcpA(1-4)]aLFucp(1-4)]bLRhap(1-3)bDApif(1-2)]aDGalpA(1- | Organism (ID 12415): Arabidopsis thaliana Organ/tissue: root, leaf, stem, flower bud Full structure (ID 35465): | |
| Synthesized dimer: aDXylp(1-3)aLFucp Donor (ID 34956): aDXylp(1-P-P-5)xXnucU Acceptor (ID 35466): aLFucp(1-4)bLRhap(1-1)Me Status: evidence in vitro
Confirmation methods: in vitro (crude extract) ID: 1799 Notes: RGXT2 possibly participates in synthesis of -4)[aDGalpA(1-2)[bDGalpA(1-3),aDXylp(1-3)[aLGalp(1-2)bDGlcpA(1-4)]aLFucp(1-4)]bLRhap(1-3)bDApif(1-2)]aDGalpA(1- | Organism (ID 12415): Arabidopsis thaliana Organ/tissue: root, leaf, stem, flower bud Full structure (ID 35467): | ||
| Synthesized dimer: aDXylp(1-3)aLFucp Donor (ID 34956): aDXylp(1-P-P-5)xXnucU Acceptor (ID 35468): aLFucp(1-4)aLRhap(1-1)Me Status: evidence in vitro
Confirmation methods: in vitro (crude extract) ID: 1800 Notes: RGXT2 possibly participates in synthesis of -4)[aDGalpA(1-2)[bDGalpA(1-3),aDXylp(1-3)[aLGalp(1-2)bDGlcpA(1-4)]aLFucp(1-4)]bLRhap(1-3)bDApif(1-2)]aDGalpA(1- | Organism (ID 12415): Arabidopsis thaliana Organ/tissue: root, leaf, stem, flower bud Full structure (ID 35469): | ||
| Synthesized dimer: aDXylp(1-3)aLFucp Donor (ID 34956): aDXylp(1-P-P-5)xXnucU Acceptor (ID 35470): aLFucp(1-4)bLRhap Status: evidence in vitro
Confirmation methods: in vitro (crude extract) ID: 1801 Notes: RGXT2 possibly participates in synthesis of -4)[aDGalpA(1-2)[bDGalpA(1-3),aDXylp(1-3)[aLGalp(1-2)bDGlcpA(1-4)]aLFucp(1-4)]bLRhap(1-3)bDApif(1-2)]aDGalpA(1- | Organism (ID 12415): Arabidopsis thaliana Organ/tissue: root, leaf, stem, flower bud Full structure (ID 35471): | ||
| Synthesized dimer: aDXylp(1-3)aLFucp Donor (ID 34956): aDXylp(1-P-P-5)xXnucU Acceptor (ID 35472): aLFucp(1-4)[Ac(1-2)]?DGlcpN Status: evidence in vitro
Confirmation methods: in vitro (crude extract) ID: 1802 Notes: RGXT2 possibly participates in synthesis of -4)[aDGalpA(1-2)[bDGalpA(1-3),aDXylp(1-3)[aLGalp(1-2)bDGlcpA(1-4)]aLFucp(1-4)]bLRhap(1-3)bDApif(1-2)]aDGalpA(1- | Organism (ID 12415): Arabidopsis thaliana Organ/tissue: root, leaf, stem, flower bud Full structure (ID 35473): | ||
| Synthesized dimer: aDXylp(1-3)LFucp Donor (ID 34956): aDXylp(1-P-P-5)xXnucU Acceptor (ID 35474): ?LFucp Status: evidence in vitro
Confirmation methods: in vitro (crude extract), in vitro (purified protein) ID: 1803 Notes: RGXT1 possibly participates in synthesis of -4)[aDGalpA(1-2)[bDGalpA(1-3),aDXylp(1-3)[aLGalp(1-2)bDGlcpA(1-4)]aLFucp(1-4)]bLRhap(1-3)bDApif(1-2)]aDGalpA(1- | Organism (ID 12415): Arabidopsis thaliana Organ/tissue: root, leaf, stem, flower bud Full structure (ID 35475): | ||
| Enzyme name: RGXT3 UniProt ID: Q9FXA7.1 CAZy family: GT77 Gene name: At1g56550 Gene GenBank ID: 842108 | Synthesized dimer: aDXylp(1-3)LFucp Donor (ID 34956): aDXylp(1-P-P-5)xXnucU Acceptor (ID 35474): ?LFucp Status: evidence in vitro
Confirmation methods: in vitro (crude extract) ID: 1804 | Organism (ID 12415): Arabidopsis thaliana Organ/tissue: leaf, silique, flower Full structure (ID 35475): | Egelund et al. 2008 DOI: 10.1016/j.febslet.2008.08.015 |
| Synthesized dimer: aDXylp(1-3)aLFucp Donor (ID 34956): aDXylp(1-P-P-5)xXnucU Acceptor (ID 35464): aLFucp(1-1)Me Status: evidence in vitro
Confirmation methods: in vitro (crude extract) ID: 1805 | Organism (ID 12415): Arabidopsis thaliana Organ/tissue: leaf, silique, flower Full structure (ID 35465): | ||
| Synthesized dimer: aDXylp(1-3)aLFucp Donor (ID 34956): aDXylp(1-P-P-5)xXnucU Acceptor (ID 35466): aLFucp(1-4)bLRhap(1-1)Me Status: evidence in vitro
Confirmation methods: in vitro (crude extract) ID: 1806 | Organism (ID 12415): Arabidopsis thaliana Organ/tissue: leaf, silique, flower Full structure (ID 35467): | ||
| Enzyme name: SEC UniProt ID: Q9M8Y0.1 CAZy family: GT41 Gene name: AT3G04240 Gene GenBank ID: 819579 | Synthesized dimer: bDGlcpN(1-3)Ser Donor (ID 35226): Ac(1-2)?DGlcpN(1-P-P-5)xXnucU Status: direct evidence in vivo
Confirmation methods: mutation, in vitro (purified protein), expression in N. benthamiana ID: 1807 Notes: SEC modifies the following proteins: itself; the Plum pox virus capsid protein (four sites near the N-terminal end of PPV-CP, threonine 19, 24, 41, or serine 43); TCP14, TCP15; RGA. | Organism (ID 12415): Arabidopsis thaliana Expressed in: N. benthamiana Full structure (ID 35476): | Hartweck et al. 2002 PMID: 12136030 Chen et al. 2005 DOI: 10.1128/JVI.79.15.9381-9387.2005 Steiner et al. 2012 DOI: 10.1105/tpc.111.093518 Zentella et al. 2016 DOI: 10.1101/gad.270587.115 Scott et al. 2006 DOI: 10.1016/j.febslet.2006.09.046 |
| Synthesized dimer: bDGlcpN(1-3)Thr Donor (ID 35226): Ac(1-2)?DGlcpN(1-P-P-5)xXnucU Status: direct evidence in vivo
Confirmation methods: mutation, in vitro (purified protein), expression in N. benthamiana ID: 1808 Notes: SEC modifies the following proteins: itself; the Plum pox virus capsid protein (four sites near the N-terminal end of PPV-CP, threonine 19, 24, 41, or serine 43). | Organism (ID 12415): Arabidopsis thaliana Expressed in: N. benthamiana Full structure (ID 35477): | ||
| Enzyme name: SPY UniProt ID: Q96301.1 CAZy family: GT41 Gene name: AT3G11540 Gene GenBank ID: 820327 | Synthesized dimer: DGlcpN(1-3)Ser Donor (ID 35226): Ac(1-2)?DGlcpN(1-P-P-5)xXnucU Status: semi-direct evidence in vivo
Confirmation methods: in vitro (purified protein), mutation ID: 1809 Notes: Additional experiments are required to confirm the activity. Expression is stress-inducible. | Organism (ID 12415): Arabidopsis thaliana Full structure (ID 35478): | Hartweck et al. 2002 PMID: 12136030 Thornton et al. 1999a DOI: 10.1007/978-94-011-4661-6_100 Qin et al. 2011 DOI: 10.1104/pp.111.187302 Thornton et al. 1999b DOI: 10.1016/S1360-1385(99)01485-5 |
| Synthesized dimer: DGlcpN(1-3)Thr Donor (ID 35226): Ac(1-2)?DGlcpN(1-P-P-5)xXnucU Status: semi-direct evidence in vivo
Confirmation methods: in vitro (purified protein), mutation ID: 1810 Notes: Additional experiments are required to confirm the activity. Expression is stress-inducible. | Organism (ID 12415): Arabidopsis thaliana Full structure (ID 35479): | ||
| Synthesized dimer: Fuc(1-3)Ser Donor (ID 35480): ??Fuc?(1-P-P-5)xXnucG Status: direct evidence in vivo
Confirmation methods: in vitro (purified protein), coexpression in tobacco leaves, mutation ID: 1811 Notes: DELLA is mono-O-fucosylated by SPINDLY (SPY). | Organism (ID 12415): Arabidopsis thaliana Expressed in: N. tabacum (co-expression) Full structure (ID 35481): | Zentella et al. 2017 DOI: 10.1038/nchembio.2320 | |
| Enzyme name: SFR2 UniProt ID: Q93Y07.1 CAZy family: GH1 Gene name: AT3G06510 Gene GenBank ID: 819829 | Synthesized dimer: bDGalp(1-6)bDGlcp Donor (ID 35382): bDGalp(1-1)[LIP(1-3),LIP(1-2)]xDGro Acceptor (ID 35482): bDGalp(1-1)[LIP(1-3),LIP(1-2)]xDGro // LIP = 16:1/16:1, 16:0/16:1, 16:1/18:1, 16:0/18:1 Status: evidence in vitro
Confirmation methods: in vitro (microsomal membrane preparation), mutation (in recombinant protein) ID: 1812 | Organism (ID 12415): Arabidopsis thaliana Full structure (ID 35483): | Roston et al. 2014 DOI: 10.1074/jbc.M114.576694 |
| Synthesized dimer: bDGalp(1-6)bDGlcp Donor (ID 35382): bDGalp(1-1)[LIP(1-3),LIP(1-2)]xDGro Acceptor (ID 35484): bDGalp(1-6)bDGlcp(1-1)[LIP(1-3),LIP(1-2)]xDGro // LIP = 16:1/16:1, 16:0/16:1, 16:1/18:1, 16:0/18:1 Status: evidence in vitro
Confirmation methods: in vitro (microsomal membrane preparation), mutation (in recombinant protein) ID: 1813 | Organism (ID 12415): Arabidopsis thaliana Full structure (ID 35485): | ||
| Enzyme name: XGD1 UniProt ID: Q94AA9.2 CAZy family: GT47 Gene name: XGD1 / At5g33290 Gene GenBank ID: 833302 | Synthesized dimer: bDXylp(1-3)aDGalpA Donor (ID 35290): ?DXylp(1-P-P-5)xXnucU Acceptor (ID 35441): -4)aDGalpA(1- Status: direct evidence in vivo
Confirmation methods: in vitro (microsomal membrane preparation), mutation, complementation ID: 1814 Notes: XGD1 participates in synthesis of pectic xylogalactouronan. | Organism (ID 12415): Arabidopsis thaliana Organ/tissue: stem, leaf, root Full structure (ID 35486): | Jensen et al. 2008 DOI: 10.1105/tpc.107.050906 |
| Enzyme name: BGLU6 UniProt ID: Q682B4 CAZy family: GH1 Gene name: BGLU6/At1g60270 Gene GenBank ID: 3767579 | Synthesized dimer: bDGlcp(1-6)bDGlcp Acceptor (ID 35487): bDGlcp(1-3)[aLRhap(1-7)]xXKaempferol Status: indirect evidence in vivo
Confirmation methods: mutation ID: 1815 Notes: BGLU6 is mainly expressed in seedlings. | Organism (ID 12415): Arabidopsis thaliana Organ/tissue: seedling, leaf, stem, silique Full structure (ID 30075): CSDB ID(s): 63333 | Ishimara et al. 2016 DOI: 10.1093/jxb/erv546 |
| Synthesized dimer: bDGlcp(1-6)bDGlcp Acceptor (ID 35488): bDGlcp(1-3)[aLRhap(1-7)]xXQuercetin Status: indirect evidence in vivo
Confirmation methods: mutation ID: 1816 Notes: BGLU6 is mainly expressed in seedlings. | Organism (ID 12415): Arabidopsis thaliana Organ/tissue: seedling, leaf, stem, silique Full structure (ID 35489): | ||
| Enzyme name: BGLU10 UniProt ID: Q93ZI4.1 CAZy family: GH1 Gene name: BGLU10 / AT4G27830 Gene GenBank ID: 828896 | Synthesized dimer: bDGlcp(1-4)pCoum Donor (ID 35490): ?DGlcp(1-9)xXSin? Acceptor (ID 35491): xXSin(9-2)bDXylp(1-2)[xXpCoum(9-6)]bDGlcp(1-3)[xXMal(1-6)bDGlcp(1-5)]xXCyanidin Status: indirect evidence in vivo
Confirmation methods: mutation, complementation ID: 1817 Notes: NC: A11. BGLU10 is required for synthesis of xXSin?(9-2)bDXylp(1-2)[bDGlcp(1-4)xXpCoum(9-6)]bDGlcp(1-3)[xXMal(1-6)bDGlcp(1-5)]xXCyanidin (A11) in planta. bDGlcp(1-9)xXSin? Is supposed to be the major donor of BGLU10. | Organism (ID 12415): Arabidopsis thaliana Organ/tissue: leaf Full structure (ID 27591): CSDB ID(s): 60852, 60860, 60931, 61102, 61108 | Miyahara et al. 2013 DOI: 10.1016/j.jplph.2012.12.001 Luo et al. 2007 DOI: 10.1111/j.1365-313X.2007.03079.x |
| Synthesized dimer: bDGlcp(1-4)pCoum Donor (ID 35492): ?DGlcp(1-9)xXFer Acceptor (ID 35491): xXSin(9-2)bDXylp(1-2)[xXpCoum(9-6)]bDGlcp(1-3)[xXMal(1-6)bDGlcp(1-5)]xXCyanidin Status: indirect evidence in vivo
Confirmation methods: mutation, complementation ID: 1818 Notes: NC: A11. BGLU10 is required for synthesis of xXSin?(9-2)bDXylp(1-2)[bDGlcp(1-4)xXpCoum(9-6)]bDGlcp(1-3)[xXMal(1-6)bDGlcp(1-5)]xXCyanidin (A11) in planta. bDGlcp(1-9)xXSin? Is supposed to be the major donor of BGLU10. | Organism (ID 12415): Arabidopsis thaliana Organ/tissue: leaf Full structure (ID 27591): CSDB ID(s): 60852, 60860, 60931, 61102, 61108 | ||
| Synthesized dimer: bDGlcp(1-4)pCoum Donor (ID 35493): ?DGlcp(1-9)xXCaf? Acceptor (ID 35491): xXSin(9-2)bDXylp(1-2)[xXpCoum(9-6)]bDGlcp(1-3)[xXMal(1-6)bDGlcp(1-5)]xXCyanidin Status: indirect evidence in vivo
Confirmation methods: mutation, complementation ID: 1819 Notes: NC: A11. BGLU10 is required for synthesis of xXSin?(9-2)bDXylp(1-2)[bDGlcp(1-4)xXpCoum(9-6)]bDGlcp(1-3)[xXMal(1-6)bDGlcp(1-5)]xXCyanidin (A11) in planta. bDGlcp(1-9)xXSin? Is supposed to be the major donor of BGLU10. | Organism (ID 12415): Arabidopsis thaliana Organ/tissue: leaf Full structure (ID 27591): CSDB ID(s): 60852, 60860, 60931, 61102, 61108 | ||
| Synthesized dimer: bDGlcp(1-4)pCoum Donor (ID 35494): ?DGlcp(1-9)xXpCoum Acceptor (ID 35491): xXSin(9-2)bDXylp(1-2)[xXpCoum(9-6)]bDGlcp(1-3)[xXMal(1-6)bDGlcp(1-5)]xXCyanidin Status: indirect evidence in vivo
Confirmation methods: mutation, complementation ID: 1820 Notes: NC: A11. BGLU10 is required for synthesis of xXSin?(9-2)bDXylp(1-2)[bDGlcp(1-4)xXpCoum(9-6)]bDGlcp(1-3)[xXMal(1-6)bDGlcp(1-5)]xXCyanidin (A11) in planta. bDGlcp(1-9)xXSin? Is supposed to be the major donor of BGLU10. | Organism (ID 12415): Arabidopsis thaliana Organ/tissue: leaf Full structure (ID 27591): CSDB ID(s): 60852, 60860, 60931, 61102, 61108 | ||
| Enzyme name: At3AT1 UniProt ID: Q9ZWB4.1 Gene name: AT1G03940 Gene GenBank ID: 839366 | Synthesized dimer: pCoum(9-6)bDGlcp Donor (ID 35495): xXpCoum(9-?)Subst // Subst = CoA (substituted at S) Acceptor (ID 35235): bDGlcp(1-3)xXCyanidin Status: evidence in vitro
Confirmation methods: in vitro (crude extract), expression in Nicotiana tabacum ID: 1821 | Organism (ID 12415): Arabidopsis thaliana Expressed in: N. tabacum; flower, leaf, root, stem, silique Full structure (ID 35496): | |
| Synthesized dimer: pCoum(9-6)bDGlcp Donor (ID 35495): xXpCoum(9-?)Subst // Subst = CoA (substituted at S) Acceptor (ID 35497): bDGlcp(1-3)Subst // Subst = pelargonidin = SMILES O{3}C1=C(C2=CC={54}C(O)C=C2)[O+]=C3C={7}C(O)C={5}C(O)C3=C1 Status: evidence in vitro
Confirmation methods: in vitro (crude extract), expression in Nicotiana tabacum ID: 1822 | Organism (ID 12415): Arabidopsis thaliana Expressed in: N. tabacum; flower, leaf, root, stem, silique Full structure (ID 35498): | ||
| Synthesized dimer: pCoum(9-6)bDGlcp Donor (ID 35495): xXpCoum(9-?)Subst // Subst = CoA (substituted at S) Acceptor (ID 35499): bDGlcp(1-3)Subst // Subst = malvidin = SMILES O{3}C1=C(C2=CC(OC)={54}C(O)C(OC)=C2)[O+]=C3C={7}C(O)C={5}C(O)C3=C1 Status: evidence in vitro
Confirmation methods: in vitro (crude extract) ID: 1823 | Organism (ID 12415): Arabidopsis thaliana Organ/tissue: flower, leaf, root, stem, silique Full structure (ID 35500): | ||
| Synthesized dimer: pCoum(9-6)bDGlcp Donor (ID 35495): xXpCoum(9-?)Subst // Subst = CoA (substituted at S) Acceptor (ID 35299): bDGlcp(1-3)xXQuercetin Status: evidence in vitro
Confirmation methods: in vitro (crude extract) ID: 1824 | Organism (ID 12415): Arabidopsis thaliana Organ/tissue: flower, leaf, root, stem, silique Full structure (ID 31829): CSDB ID(s): 67047 | ||
| Synthesized dimer: pCoum(9-6)bDGlcp Donor (ID 35495): xXpCoum(9-?)Subst // Subst = CoA (substituted at S) Acceptor (ID 35296): bDGlcp(1-3)xXKaempferol Status: evidence in vitro
Confirmation methods: in vitro (crude extract) ID: 1825 | Organism (ID 12415): Arabidopsis thaliana Organ/tissue: flower, leaf, root, stem, silique Full structure (ID 28558): CSDB ID(s): 61824, 63015, 65013, 65335, 66268, 66907, 68998 | ||
| Synthesized dimer: pCoum(9-6)bDGlcp Donor (ID 35495): xXpCoum(9-?)Subst // Subst = CoA (substituted at S) Acceptor (ID 35501): bDGlcp(1-7)xXKaempferol Status: evidence in vitro
Confirmation methods: in vitro (crude extract) ID: 1826 | Organism (ID 12415): Arabidopsis thaliana Organ/tissue: flower, leaf, root, stem, silique Full structure (ID 35502): | ||
| Synthesized dimer: Fer(9-6)bDGlcp Donor (ID 35503): xXFer(9-?)Subst // Subst = CoA (substituted at S) Acceptor (ID 35235): bDGlcp(1-3)xXCyanidin Status: evidence in vitro
Confirmation methods: in vitro (crude extract) ID: 1827 | Organism (ID 12415): Arabidopsis thaliana Organ/tissue: flower, leaf, root, stem, silique Full structure (ID 35504): | ||
| Synthesized dimer: Fer(9-6)bDGlcp Donor (ID 35503): xXFer(9-?)Subst // Subst = CoA (substituted at S) Acceptor (ID 35505): bDGlcp(1-3)Subst // Subst = pelargonin Status: evidence in vitro
Confirmation methods: in vitro (crude extract) ID: 1828 | Organism (ID 12415): Arabidopsis thaliana Organ/tissue: flower, leaf, root, stem, silique Full structure (ID 35506): | ||
| Synthesized dimer: Fer(9-6)bDGlcp Donor (ID 35503): xXFer(9-?)Subst // Subst = CoA (substituted at S) Acceptor (ID 35499): bDGlcp(1-3)Subst // Subst = malvidin = SMILES O{3}C1=C(C2=CC(OC)={54}C(O)C(OC)=C2)[O+]=C3C={7}C(O)C={5}C(O)C3=C1 Status: evidence in vitro
Confirmation methods: in vitro (crude extract) ID: 1829 | Organism (ID 12415): Arabidopsis thaliana Organ/tissue: flower, leaf, root, stem, silique Full structure (ID 35507): | ||
| Synthesized dimer: Fer(9-6)bDGlcp Donor (ID 35503): xXFer(9-?)Subst // Subst = CoA (substituted at S) Acceptor (ID 35299): bDGlcp(1-3)xXQuercetin Status: evidence in vitro
Confirmation methods: in vitro (crude extract) ID: 1830 | Organism (ID 12415): Arabidopsis thaliana Organ/tissue: flower, leaf, root, stem, silique Full structure (ID 31830): CSDB ID(s): 67048 | ||
| Synthesized dimer: Fer(9-6)bDGlcp Donor (ID 35503): xXFer(9-?)Subst // Subst = CoA (substituted at S) Acceptor (ID 35296): bDGlcp(1-3)xXKaempferol Status: evidence in vitro
Confirmation methods: in vitro (crude extract) ID: 1831 | Organism (ID 12415): Arabidopsis thaliana Organ/tissue: flower, leaf, root, stem, silique Full structure (ID 35508): | ||
| Synthesized dimer: Fer(9-6)bDGlcp Donor (ID 35503): xXFer(9-?)Subst // Subst = CoA (substituted at S) Acceptor (ID 35501): bDGlcp(1-7)xXKaempferol Status: evidence in vitro
Confirmation methods: in vitro (crude extract) ID: 1832 | Organism (ID 12415): Arabidopsis thaliana Organ/tissue: flower, leaf, root, stem, silique Full structure (ID 35509): | ||
| Synthesized dimer: Caf(9-6)bDGlcp Donor (ID 35510): xXCaf?(9-?)Subst // Subst = CoA (substituted at S) Acceptor (ID 35235): bDGlcp(1-3)xXCyanidin Status: evidence in vitro
Confirmation methods: in vitro (crude extract) ID: 1833 | Organism (ID 12415): Arabidopsis thaliana Organ/tissue: flower, leaf, root, stem, silique Full structure (ID 35511): | ||
| Synthesized dimer: Caf(9-6)bDGlcp Donor (ID 35510): xXCaf?(9-?)Subst // Subst = CoA (substituted at S) Acceptor (ID 35497): bDGlcp(1-3)Subst // Subst = pelargonidin = SMILES O{3}C1=C(C2=CC={54}C(O)C=C2)[O+]=C3C={7}C(O)C={5}C(O)C3=C1 Status: evidence in vitro
Confirmation methods: in vitro (crude extract) ID: 1834 | Organism (ID 12415): Arabidopsis thaliana Organ/tissue: flower, leaf, root, stem, silique Full structure (ID 35512): | ||
| Synthesized dimer: Caf(9-6)bDGlcp Donor (ID 35510): xXCaf?(9-?)Subst // Subst = CoA (substituted at S) Acceptor (ID 35499): bDGlcp(1-3)Subst // Subst = malvidin = SMILES O{3}C1=C(C2=CC(OC)={54}C(O)C(OC)=C2)[O+]=C3C={7}C(O)C={5}C(O)C3=C1 Status: evidence in vitro
Confirmation methods: in vitro (crude extract) ID: 1835 | Organism (ID 12415): Arabidopsis thaliana Organ/tissue: flower, leaf, root, stem, silique Full structure (ID 35513): | ||
| Synthesized dimer: Caf(9-6)bDGlcp Donor (ID 35510): xXCaf?(9-?)Subst // Subst = CoA (substituted at S) Acceptor (ID 35299): bDGlcp(1-3)xXQuercetin Status: evidence in vitro
Confirmation methods: in vitro (crude extract) ID: 1836 | Organism (ID 12415): Arabidopsis thaliana Organ/tissue: flower, leaf, root, stem, silique Full structure (ID 31828): CSDB ID(s): 67046 | ||
| Synthesized dimer: Caf(9-6)bDGlcp Donor (ID 35510): xXCaf?(9-?)Subst // Subst = CoA (substituted at S) Acceptor (ID 35296): bDGlcp(1-3)xXKaempferol Status: evidence in vitro
Confirmation methods: in vitro (crude extract) ID: 1837 | Organism (ID 12415): Arabidopsis thaliana Organ/tissue: flower, leaf, root, stem, silique Full structure (ID 35514): | ||
| Synthesized dimer: Caf(9-6)bDGlcp Donor (ID 35510): xXCaf?(9-?)Subst // Subst = CoA (substituted at S) Acceptor (ID 35501): bDGlcp(1-7)xXKaempferol Status: evidence in vitro
Confirmation methods: in vitro (crude extract) ID: 1838 | Organism (ID 12415): Arabidopsis thaliana Organ/tissue: flower, leaf, root, stem, silique Full structure (ID 35515): | ||
| Enzyme name: At3AT2 UniProt ID: Q9LR73.1 Gene name: At1g03495 Gene GenBank ID: 3766646 | Synthesized dimer: pCoum(9-6)bDGlcp Donor (ID 35495): xXpCoum(9-?)Subst // Subst = CoA (substituted at S) Acceptor (ID 35235): bDGlcp(1-3)xXCyanidin Status: evidence in vitro
Confirmation methods: in vitro (crude extract), expression in Nicotiana tabacum ID: 1839 | Organism (ID 12415): Arabidopsis thaliana Expressed in: N. tabacum; flower, leaf, root, stem, silique Full structure (ID 35496): | |
| Synthesized dimer: pCoum(9-6)bDGlcp Donor (ID 35495): xXpCoum(9-?)Subst // Subst = CoA (substituted at S) Acceptor (ID 35505): bDGlcp(1-3)Subst // Subst = pelargonin Status: evidence in vitro
Confirmation methods: in vitro (crude extract), expression in Nicotiana tabacum ID: 1840 | Organism (ID 12415): Arabidopsis thaliana Expressed in: N. tabacum; flower, leaf, root, stem, silique Full structure (ID 35516): | ||
| Synthesized dimer: pCoum(9-6)bDGlcp Donor (ID 35495): xXpCoum(9-?)Subst // Subst = CoA (substituted at S) Acceptor (ID 35499): bDGlcp(1-3)Subst // Subst = malvidin = SMILES O{3}C1=C(C2=CC(OC)={54}C(O)C(OC)=C2)[O+]=C3C={7}C(O)C={5}C(O)C3=C1 Status: evidence in vitro
Confirmation methods: in vitro (crude extract) ID: 1841 | Organism (ID 12415): Arabidopsis thaliana Organ/tissue: flower, leaf, root, stem, silique Full structure (ID 35500): | ||
| Synthesized dimer: pCoum(9-6)bDGlcp Donor (ID 35495): xXpCoum(9-?)Subst // Subst = CoA (substituted at S) Acceptor (ID 35299): bDGlcp(1-3)xXQuercetin Status: evidence in vitro
Confirmation methods: in vitro (crude extract) ID: 1842 | Organism (ID 12415): Arabidopsis thaliana Organ/tissue: flower, leaf, root, stem, silique Full structure (ID 31829): CSDB ID(s): 67047 | ||
| Synthesized dimer: pCoum(9-6)bDGlcp Donor (ID 35495): xXpCoum(9-?)Subst // Subst = CoA (substituted at S) Acceptor (ID 35296): bDGlcp(1-3)xXKaempferol Status: evidence in vitro
Confirmation methods: in vitro (crude extract) ID: 1843 | Organism (ID 12415): Arabidopsis thaliana Organ/tissue: flower, leaf, root, stem, silique Full structure (ID 28558): CSDB ID(s): 61824, 63015, 65013, 65335, 66268, 66907, 68998 | ||
| Synthesized dimer: pCoum(9-6)bDGlcp Donor (ID 35495): xXpCoum(9-?)Subst // Subst = CoA (substituted at S) Acceptor (ID 35501): bDGlcp(1-7)xXKaempferol Status: evidence in vitro
Confirmation methods: in vitro (crude extract) ID: 1844 | Organism (ID 12415): Arabidopsis thaliana Organ/tissue: flower, leaf, root, stem, silique Full structure (ID 35502): | ||
| Synthesized dimer: Fer(9-6)bDGlcp Donor (ID 35503): xXFer(9-?)Subst // Subst = CoA (substituted at S) Acceptor (ID 35235): bDGlcp(1-3)xXCyanidin Status: evidence in vitro
Confirmation methods: in vitro (crude extract) ID: 1845 | Organism (ID 12415): Arabidopsis thaliana Organ/tissue: flower, leaf, root, stem, silique Full structure (ID 35504): | ||
| Synthesized dimer: Fer(9-6)bDGlcp Donor (ID 35503): xXFer(9-?)Subst // Subst = CoA (substituted at S) Acceptor (ID 35505): bDGlcp(1-3)Subst // Subst = pelargonin Status: evidence in vitro
Confirmation methods: in vitro (crude extract) ID: 1846 | Organism (ID 12415): Arabidopsis thaliana Organ/tissue: flower, leaf, root, stem, silique Full structure (ID 35506): | ||
| Synthesized dimer: Fer(9-6)bDGlcp Donor (ID 35503): xXFer(9-?)Subst // Subst = CoA (substituted at S) Acceptor (ID 35499): bDGlcp(1-3)Subst // Subst = malvidin = SMILES O{3}C1=C(C2=CC(OC)={54}C(O)C(OC)=C2)[O+]=C3C={7}C(O)C={5}C(O)C3=C1 Status: evidence in vitro
Confirmation methods: in vitro (crude extract) ID: 1847 | Organism (ID 12415): Arabidopsis thaliana Organ/tissue: flower, leaf, root, stem, silique Full structure (ID 35507): | ||
| Synthesized dimer: Fer(9-6)bDGlcp Donor (ID 35503): xXFer(9-?)Subst // Subst = CoA (substituted at S) Acceptor (ID 35299): bDGlcp(1-3)xXQuercetin Status: evidence in vitro
Confirmation methods: in vitro (crude extract) ID: 1848 | Organism (ID 12415): Arabidopsis thaliana Organ/tissue: flower, leaf, root, stem, silique Full structure (ID 31830): CSDB ID(s): 67048 | ||
| Synthesized dimer: Fer(9-6)bDGlcp Donor (ID 35503): xXFer(9-?)Subst // Subst = CoA (substituted at S) Acceptor (ID 35296): bDGlcp(1-3)xXKaempferol Status: evidence in vitro
Confirmation methods: in vitro (crude extract) ID: 1849 | Organism (ID 12415): Arabidopsis thaliana Organ/tissue: flower, leaf, root, stem, silique Full structure (ID 35508): | ||
| Synthesized dimer: Fer(9-6)bDGlcp Donor (ID 35503): xXFer(9-?)Subst // Subst = CoA (substituted at S) Acceptor (ID 35501): bDGlcp(1-7)xXKaempferol Status: evidence in vitro
Confirmation methods: in vitro (crude extract) ID: 1850 | Organism (ID 12415): Arabidopsis thaliana Organ/tissue: flower, leaf, root, stem, silique Full structure (ID 35509): | ||
| Synthesized dimer: Caf(9-6)bDGlcp Donor (ID 35510): xXCaf?(9-?)Subst // Subst = CoA (substituted at S) Acceptor (ID 35235): bDGlcp(1-3)xXCyanidin Status: evidence in vitro
Confirmation methods: in vitro (crude extract) ID: 1851 | Organism (ID 12415): Arabidopsis thaliana Organ/tissue: flower, leaf, root, stem, silique Full structure (ID 35511): | ||
| Synthesized dimer: Caf(9-6)bDGlcp Donor (ID 35510): xXCaf?(9-?)Subst // Subst = CoA (substituted at S) Acceptor (ID 35505): bDGlcp(1-3)Subst // Subst = pelargonin Status: evidence in vitro
Confirmation methods: in vitro (crude extract) ID: 1852 | Organism (ID 12415): Arabidopsis thaliana Organ/tissue: flower, leaf, root, stem, silique Full structure (ID 35517): | ||
| Synthesized dimer: Caf(9-6)bDGlcp Donor (ID 35510): xXCaf?(9-?)Subst // Subst = CoA (substituted at S) Acceptor (ID 35499): bDGlcp(1-3)Subst // Subst = malvidin = SMILES O{3}C1=C(C2=CC(OC)={54}C(O)C(OC)=C2)[O+]=C3C={7}C(O)C={5}C(O)C3=C1 Status: evidence in vitro
Confirmation methods: in vitro (crude extract) ID: 1853 | Organism (ID 12415): Arabidopsis thaliana Organ/tissue: flower, leaf, root, stem, silique Full structure (ID 35513): | ||
| Synthesized dimer: Caf(9-6)bDGlcp Donor (ID 35510): xXCaf?(9-?)Subst // Subst = CoA (substituted at S) Acceptor (ID 35299): bDGlcp(1-3)xXQuercetin Status: evidence in vitro
Confirmation methods: in vitro (crude extract) ID: 1854 | Organism (ID 12415): Arabidopsis thaliana Organ/tissue: flower, leaf, root, stem, silique Full structure (ID 31828): CSDB ID(s): 67046 | ||
| Synthesized dimer: Caf(9-6)bDGlcp Donor (ID 35510): xXCaf?(9-?)Subst // Subst = CoA (substituted at S) Acceptor (ID 35296): bDGlcp(1-3)xXKaempferol Status: evidence in vitro
Confirmation methods: in vitro (crude extract) ID: 1855 | Organism (ID 12415): Arabidopsis thaliana Organ/tissue: flower, leaf, root, stem, silique Full structure (ID 35514): | ||
| Synthesized dimer: Caf(9-6)bDGlcp Donor (ID 35510): xXCaf?(9-?)Subst // Subst = CoA (substituted at S) Acceptor (ID 35501): bDGlcp(1-7)xXKaempferol Status: evidence in vitro
Confirmation methods: in vitro (crude extract) ID: 1856 | Organism (ID 12415): Arabidopsis thaliana Organ/tissue: flower, leaf, root, stem, silique Full structure (ID 35515): | ||
| Enzyme name: At5MAT UniProt ID: Q9LJB4.1 Gene name: AT5MAT / AT3G29590 Gene GenBank ID: 822623 | Synthesized dimer: Mal(1-6)bDGlcp Donor (ID 35518): xXMal(1-?)Subst // Subst = CoA (substituted at S) Acceptor (ID 35519): bDGlcp(1-3)[bDGlcp(1-5)]xXCyanidin Status: evidence in vitro
Confirmation methods: in vitro (crude extract), mutation ID: 1857 Notes: All the anthocyanins with malonyl groups attached to the 5-glucoside (A2, bDXylp(1-2)bDGlcp(1-3)[xXMal(1-6)bDGlcp(1-5)]xXCyanidin; A5, bDXylp(1-2)[xXpCoum(9-6)]bDGlcp(1-3)[xXMal(1-6)bDGlcp(1-5)]xXCyanidin; A8, bDXylp(1-2)[bDGlcp(1-4)xXpCoum(9-6)]bDGlcp(1-3)[xXMal(1-6)bDGlcp(1-5)]xXCyanidin; A9, xXSin(9-2)bDXylp(1-2)[xXpCoum(9-6)]bDGlcp(1-3)[xXMal(1-6)bDGlcp(1-5)]xXCyanidin; A11, xXSin(9-2)bDXylp(1-2)[bDGlcp(1-4)xXpCoum(9-6)]bDGlcp(1-3)[xXMal(1-6)bDGlcp(1-5)]xXCyanidin) were lost upon the At5MAT knockout. | Organism (ID 12415): Arabidopsis thaliana Organ/tissue: flower, leaf Full structure (ID 35520): | Miyahara et al. 2013 DOI: 10.1016/j.jplph.2012.12.001 Luo et al. 2007 DOI: 10.1111/j.1365-313X.2007.03079.x D'Auria et al. 2007 DOI: 10.1016/j.febslet.2007.01.060 |
| Synthesized dimer: Mal(1-6)bDGlcp Donor (ID 35518): xXMal(1-?)Subst // Subst = CoA (substituted at S) Acceptor (ID 35521): bDGlcp(1-3)[bDGlcp(1-5)]Subst // Subst = pelargonidin = SMILES O{3}C1=C(C2=CC={54}C(O)C=C2)[O+]=C3C={7}C(O)C={5}C(O)C3=C1 Status: evidence in vitro
Confirmation methods: in vitro (crude extract), mutation ID: 1858 Notes: All the anthocyanins with malonyl groups attached to the 5-glucoside (A2, bDXylp(1-2)bDGlcp(1-3)[xXMal(1-6)bDGlcp(1-5)]xXCyanidin; A5, bDXylp(1-2)[xXpCoum(9-6)]bDGlcp(1-3)[xXMal(1-6)bDGlcp(1-5)]xXCyanidin; A8, bDXylp(1-2)[bDGlcp(1-4)xXpCoum(9-6)]bDGlcp(1-3)[xXMal(1-6)bDGlcp(1-5)]xXCyanidin; A9, xXSin(9-2)bDXylp(1-2)[xXpCoum(9-6)]bDGlcp(1-3)[xXMal(1-6)bDGlcp(1-5)]xXCyanidin; A11, xXSin(9-2)bDXylp(1-2)[bDGlcp(1-4)xXpCoum(9-6)]bDGlcp(1-3)[xXMal(1-6)bDGlcp(1-5)]xXCyanidin) were lost upon the At5MAT knockout. | Organism (ID 12415): Arabidopsis thaliana Organ/tissue: flower, leaf Full structure (ID 35522): | ||
| Synthesized dimer: Mal(1-6)bDGlcp Donor (ID 35518): xXMal(1-?)Subst // Subst = CoA (substituted at S) Acceptor (ID 35523): bDGlcp(1-3)[bDGlcp(1-5)]Subst // Subst = peonidin Status: evidence in vitro
Confirmation methods: in vitro (crude extract), mutation ID: 1859 Notes: All the anthocyanins with malonyl groups attached to the 5-glucoside (A2, bDXylp(1-2)bDGlcp(1-3)[xXMal(1-6)bDGlcp(1-5)]xXCyanidin; A5, bDXylp(1-2)[xXpCoum(9-6)]bDGlcp(1-3)[xXMal(1-6)bDGlcp(1-5)]xXCyanidin; A8, bDXylp(1-2)[bDGlcp(1-4)xXpCoum(9-6)]bDGlcp(1-3)[xXMal(1-6)bDGlcp(1-5)]xXCyanidin; A9, xXSin(9-2)bDXylp(1-2)[xXpCoum(9-6)]bDGlcp(1-3)[xXMal(1-6)bDGlcp(1-5)]xXCyanidin; A11, xXSin(9-2)bDXylp(1-2)[bDGlcp(1-4)xXpCoum(9-6)]bDGlcp(1-3)[xXMal(1-6)bDGlcp(1-5)]xXCyanidin) were lost upon the At5MAT knockout. | Organism (ID 12415): Arabidopsis thaliana Organ/tissue: flower, leaf Full structure (ID 35524): | Miyahara et al. 2013 DOI: 10.1016/j.jplph.2012.12.001 Luo et al. 2007 DOI: 10.1111/j.1365-313X.2007.03079.x | |
| Synthesized dimer: Mal(1-6)bDGlcp Donor (ID 35518): xXMal(1-?)Subst // Subst = CoA (substituted at S) Acceptor (ID 35525): xXpCoum(9-6)bDGlcp(1-3)[bDGlcp(1-5)]xXCyanidin Status: evidence in vitro
Confirmation methods: in vitro (crude extract), mutation ID: 1860 Notes: All the anthocyanins with malonyl groups attached to the 5-glucoside (A2, bDXylp(1-2)bDGlcp(1-3)[xXMal(1-6)bDGlcp(1-5)]xXCyanidin; A5, bDXylp(1-2)[xXpCoum(9-6)]bDGlcp(1-3)[xXMal(1-6)bDGlcp(1-5)]xXCyanidin; A8, bDXylp(1-2)[bDGlcp(1-4)xXpCoum(9-6)]bDGlcp(1-3)[xXMal(1-6)bDGlcp(1-5)]xXCyanidin; A9, xXSin(9-2)bDXylp(1-2)[xXpCoum(9-6)]bDGlcp(1-3)[xXMal(1-6)bDGlcp(1-5)]xXCyanidin; A11, xXSin(9-2)bDXylp(1-2)[bDGlcp(1-4)xXpCoum(9-6)]bDGlcp(1-3)[xXMal(1-6)bDGlcp(1-5)]xXCyanidin) were lost upon the At5MAT knockout. | Organism (ID 12415): Arabidopsis thaliana Organ/tissue: flower, leaf Full structure (ID 32422): CSDB ID(s): 68257 | Miyahara et al. 2013 DOI: 10.1016/j.jplph.2012.12.001 Luo et al. 2007 DOI: 10.1111/j.1365-313X.2007.03079.x D'Auria et al. 2007 DOI: 10.1016/j.febslet.2007.01.060 | |
| Synthesized dimer: Mal(1-6)bDGlcp Donor (ID 35518): xXMal(1-?)Subst // Subst = CoA (substituted at S) Acceptor (ID 35526): bDXylp(1-2)[xXpCoum(9-6)]bDGlcp(1-3)[bDGlcp(1-5)]xXCyanidin Status: direct evidence in vivo
Confirmation methods: in vitro (crude extract),mutation ID: 1861 Notes: NC: A5. All the anthocyanins with malonyl groups attached to the 5-glucoside (A2, bDXylp(1-2)bDGlcp(1-3)[xXMal(1-6)bDGlcp(1-5)]xXCyanidin; A5, bDXylp(1-2)[xXpCoum(9-6)]bDGlcp(1-3)[xXMal(1-6)bDGlcp(1-5)]xXCyanidin; A8, bDXylp(1-2)[bDGlcp(1-4)xXpCoum(9-6)]bDGlcp(1-3)[xXMal(1-6)bDGlcp(1-5)]xXCyanidin; A9, xXSin(9-2)bDXylp(1-2)[xXpCoum(9-6)]bDGlcp(1-3)[xXMal(1-6)bDGlcp(1-5)]xXCyanidin; A11, xXSin(9-2)bDXylp(1-2)[bDGlcp(1-4)xXpCoum(9-6)]bDGlcp(1-3)[xXMal(1-6)bDGlcp(1-5)]xXCyanidin) were lost upon the At5MAT knockout. | Organism (ID 12415): Arabidopsis thaliana Organ/tissue: flower, leaf Full structure (ID 27594): CSDB ID(s): 60855, 60866, 60925, 61096 | ||
| Synthesized dimer: Mal(1-6)bDGlcp Donor (ID 35518): xXMal(1-?)Subst // Subst = CoA (substituted at S) Acceptor (ID 35527): xXpCoum(9-4)aLRhap(1-6)bDGlcp(1-3)[bDGlcp(1-5)]Subst // Subst = delphinidin = SMILES O{3}C1=C(C2=C{53}C(O)={54}C(O){55}C(O)=C2)[O+]=C3C={7}C(O)C={5}C(O)C3=C1 Status: evidence in vitro
Confirmation methods: in vitro (crude extract), mutation ID: 1862 Notes: All the anthocyanins with malonyl groups attached to the 5-glucoside (A2, bDXylp(1-2)bDGlcp(1-3)[xXMal(1-6)bDGlcp(1-5)]xXCyanidin; A5, bDXylp(1-2)[xXpCoum(9-6)]bDGlcp(1-3)[xXMal(1-6)bDGlcp(1-5)]xXCyanidin; A8, bDXylp(1-2)[bDGlcp(1-4)xXpCoum(9-6)]bDGlcp(1-3)[xXMal(1-6)bDGlcp(1-5)]xXCyanidin; A9, xXSin(9-2)bDXylp(1-2)[xXpCoum(9-6)]bDGlcp(1-3)[xXMal(1-6)bDGlcp(1-5)]xXCyanidin; A11, xXSin(9-2)bDXylp(1-2)[bDGlcp(1-4)xXpCoum(9-6)]bDGlcp(1-3)[xXMal(1-6)bDGlcp(1-5)]xXCyanidin) were lost upon the At5MAT knockout. | Organism (ID 12415): Arabidopsis thaliana Organ/tissue: flower, leaf Full structure (ID 35528): | Miyahara et al. 2013 DOI: 10.1016/j.jplph.2012.12.001 Luo et al. 2007 DOI: 10.1111/j.1365-313X.2007.03079.x | |
| Synthesized dimer: Mal(1-6)bDGlcp Donor (ID 35518): xXMal(1-?)Subst // Subst = CoA (substituted at S) Acceptor (ID 35529): xXpCoum(9-4)aLRhap(1-6)bDGlcp(1-3)[bDGlcp(1-5)]Subst // Subst = petunidin = SMILES COC1=CC(C2=[O+]C3=C{7}C(O)=C{5}C(O)=C3C={3}C2O)=C{53}C(O)={54}C1O Status: evidence in vitro
Confirmation methods: in vitro (crude extract), mutation ID: 1863 Notes: All the anthocyanins with malonyl groups attached to the 5-glucoside (A2, bDXylp(1-2)bDGlcp(1-3)[xXMal(1-6)bDGlcp(1-5)]xXCyanidin; A5, bDXylp(1-2)[xXpCoum(9-6)]bDGlcp(1-3)[xXMal(1-6)bDGlcp(1-5)]xXCyanidin; A8, bDXylp(1-2)[bDGlcp(1-4)xXpCoum(9-6)]bDGlcp(1-3)[xXMal(1-6)bDGlcp(1-5)]xXCyanidin; A9, xXSin(9-2)bDXylp(1-2)[xXpCoum(9-6)]bDGlcp(1-3)[xXMal(1-6)bDGlcp(1-5)]xXCyanidin; A11, xXSin(9-2)bDXylp(1-2)[bDGlcp(1-4)xXpCoum(9-6)]bDGlcp(1-3)[xXMal(1-6)bDGlcp(1-5)]xXCyanidin) were lost upon the At5MAT knockout. | Organism (ID 12415): Arabidopsis thaliana Organ/tissue: flower, leaf Full structure (ID 35530): | Miyahara et al. 2013 DOI: 10.1016/j.jplph.2012.12.001 Luo et al. 2007 DOI: 10.1111/j.1365-313X.2007.03079.x D'Auria et al. 2007 DOI: 10.1016/j.febslet.2007.01.060 | |
| Synthesized dimer: Mal(1-6)bDGlcp Donor (ID 35518): xXMal(1-?)Subst // Subst = CoA (substituted at S) Acceptor (ID 35531): xXSin(9-2)bDXylp(1-2)[xXpCoum(9-6)]bDGlcp(1-3)[bDGlcp(1-5)]xXCyanidin Status: direct evidence in vivo
Confirmation methods: in vitro (crude extract), mutation ID: 1864 Notes: NC: A9. All the anthocyanins with malonyl groups attached to the 5-glucoside (A2, bDXylp(1-2)bDGlcp(1-3)[xXMal(1-6)bDGlcp(1-5)]xXCyanidin; A5, bDXylp(1-2)[xXpCoum(9-6)]bDGlcp(1-3)[xXMal(1-6)bDGlcp(1-5)]xXCyanidin; A8, bDXylp(1-2)[bDGlcp(1-4)xXpCoum(9-6)]bDGlcp(1-3)[xXMal(1-6)bDGlcp(1-5)]xXCyanidin; A9, xXSin(9-2)bDXylp(1-2)[xXpCoum(9-6)]bDGlcp(1-3)[xXMal(1-6)bDGlcp(1-5)]xXCyanidin; A11, xXSin(9-2)bDXylp(1-2)[bDGlcp(1-4)xXpCoum(9-6)]bDGlcp(1-3)[xXMal(1-6)bDGlcp(1-5)]xXCyanidin) were lost upon the At5MAT knockout. | Organism (ID 12415): Arabidopsis thaliana Organ/tissue: flower, leaf Full structure (ID 27596): CSDB ID(s): 60858, 60862, 60929, 61100 | ||
| Synthesized dimer: Mal(1-6)bDGlcp Donor (ID 35518): xXMal(1-?)Subst // Subst = CoA (substituted at S) Acceptor (ID 35532): bDXylp(1-2)[?DGlcp(1-4)xXpCoum(9-6)]bDGlcp(1-3)[bDGlcp(1-5)]xXCyanidin Status: direct evidence in vivo
Confirmation methods: in vitro (purified protein), mutation ID: 1865 Notes: NC: A8. All the anthocyanins with malonyl groups attached to the 5-glucoside (A2, bDXylp(1-2)bDGlcp(1-3)[xXMal(1-6)bDGlcp(1-5)]xXCyanidin; A5, bDXylp(1-2)[xXpCoum(9-6)]bDGlcp(1-3)[xXMal(1-6)bDGlcp(1-5)]xXCyanidin; A8, bDXylp(1-2)[bDGlcp(1-4)xXpCoum(9-6)]bDGlcp(1-3)[xXMal(1-6)bDGlcp(1-5)]xXCyanidin; A9, xXSin(9-2)bDXylp(1-2)[xXpCoum(9-6)]bDGlcp(1-3)[xXMal(1-6)bDGlcp(1-5)]xXCyanidin; A11, xXSin(9-2)bDXylp(1-2)[bDGlcp(1-4)xXpCoum(9-6)]bDGlcp(1-3)[xXMal(1-6)bDGlcp(1-5)]xXCyanidin) were lost upon the At5MAT knockout. | Organism (ID 12415): Arabidopsis thaliana Organ/tissue: flower, leaf Full structure (ID 35533): | ||
| Synthesized dimer: Mal(1-6)bDGlcp Donor (ID 35518): xXMal(1-?)Subst // Subst = CoA (substituted at S) Acceptor (ID 35534): xXSin(9-2)bDXylp(1-2)[?DGlcp(1-4)xXpCoum(9-6)]bDGlcp(1-3)[bDGlcp(1-5)]xXCyanidin Status: direct evidence in vivo
Confirmation methods: in vitro (purified protein), mutation ID: 1866 Notes: NC: A11. All the anthocyanins with malonyl groups attached to the 5-glucoside (A2, bDXylp(1-2)bDGlcp(1-3)[xXMal(1-6)bDGlcp(1-5)]xXCyanidin; A5, bDXylp(1-2)[xXpCoum(9-6)]bDGlcp(1-3)[xXMal(1-6)bDGlcp(1-5)]xXCyanidin; A8, bDXylp(1-2)[bDGlcp(1-4)xXpCoum(9-6)]bDGlcp(1-3)[xXMal(1-6)bDGlcp(1-5)]xXCyanidin; A9, xXSin(9-2)bDXylp(1-2)[xXpCoum(9-6)]bDGlcp(1-3)[xXMal(1-6)bDGlcp(1-5)]xXCyanidin; A11, xXSin(9-2)bDXylp(1-2)[bDGlcp(1-4)xXpCoum(9-6)]bDGlcp(1-3)[xXMal(1-6)bDGlcp(1-5)]xXCyanidin) were lost upon the At5MAT knockout. | Organism (ID 12415): Arabidopsis thaliana Organ/tissue: flower, leaf Full structure (ID 27591): CSDB ID(s): 60852, 60860, 60931, 61102, 61108 | ||
| Enzyme name: TBL3 UniProt ID: Q8LED3 Gene name: TBL3/AT5G01360 Gene GenBank ID: 830298 | Synthesized dimer: Ac(1-3)bDXylp Status: indirect evidence in vivo
Confirmation methods: double mutation ID: 1867 Notes: The tbl3/tbl31 double mutant had a specific reduction in 3-O-monoacetylation of xylan. | Organism (ID 12415): Arabidopsis thaliana Organ/tissue: stem Full structure (ID 35535): | Yuan et al. 2016a DOI: 10.1093/pcp/pcv172 |
| Enzyme name: TBL31 Gene name: TBL33/AT1G73140 Gene GenBank ID: 843645 | Synthesized dimer: Ac(1-3)bDXylp Status: indirect evidence in vivo
Confirmation methods: double mutation ID: 1868 Notes: The tbl3/tbl31 double mutant had a specific reduction in 3-O-monoacetylation of xylan. | Organism (ID 12415): Arabidopsis thaliana Organ/tissue: stem Full structure (ID 35535): | |
| Enzyme name: TBL29 / ESK1 UniProt ID: Q9LY46.1 Gene name: ESK1 / AT3G55990 Gene GenBank ID: 824765 | Synthesized dimer: Ac(1-2)bDXylp Donor (ID 35536): Ac(1-?)Subst // Subst = CoA (substituted at S) Acceptor (ID 35537): -4)bDXylp(1- Status: semi-direct evidence in vivo
Confirmation methods: in vitro (purified protein), mutation ID: 1869 Notes: TBL29 / ESK1 predominantly transfers the acetyl group to 2C of bDXylp. TBL29/ESK1 adds up to five acetyl groups to xylooligosaccharides with n ≥13. The levels of 2-O- and 3-O-monoacetylation of xylosyl residues in xylan are specifically reduced in the esk1 mutant. An idealized structure is shown. | Organism (ID 12415): Arabidopsis thaliana Organ/tissue: stem Full structure (ID 35538): | Urbanowicz et al. 2014 DOI: 10.1111/tpj.12643 Yuan et al. 2016b DOI: 10.1371/journal.pone.0146460 Yuan et al. 2013 DOI: 10.1093/pcp/pct070 Xiong et al. 2013 DOI: 10.1093/mp/sst014 |
| Synthesized dimer: Ac(1-3)bDXylp Donor (ID 35536): Ac(1-?)Subst // Subst = CoA (substituted at S) Acceptor (ID 35537): -4)bDXylp(1- Status: semi-direct evidence in vivo
Confirmation methods: in vitro (purified protein), mutation ID: 1870 Notes: TBL29 / ESK1 predominantly transfers the acetyl group to 2C of bDXylp. TBL29/ESK1 adds up to five acetyl groups to xylooligosaccharides with n ≥13. The levels of 2-O- and 3-O-monoacetylation of xylosyl residues in xylan are specifically reduced in the esk1 mutant. An idealized structure is shown. | Organism (ID 12415): Arabidopsis thaliana Organ/tissue: stem Full structure (ID 35538): | ||
| Enzyme name: TBL32 UniProt ID: Q9SRL3.1 Gene name: AT3G11030 Gene GenBank ID: 820274 | Synthesized dimer: Ac(1-3)bDXylp Donor (ID 35536): Ac(1-?)Subst // Subst = CoA (substituted at S) Acceptor (ID 35539): -4)[aDGlcpA(1-2)]bDXylp(1- Status: indirect evidence in vivo
Confirmation methods: double mutation of tbl32/tbl33 ID: 1871 Notes: TBL32 and TBL33 are putative acetyltransferases mediating acetyl substitutions at O-3 of 2-O-GlcA-substituted xylosyl residues in xylan; they are also involved in xylan 3-O-monoacetylation and 2,3-di-O-acetylation. | Organism (ID 12415): Arabidopsis thaliana Organ/tissue: leaf, root, stem Full structure (ID 35540): | Yuan et al. 2016b DOI: 10.1371/journal.pone.0146460 |
| Enzyme name: TBL33 UniProt ID: F4IH21.1 Gene name: AT2G40320 Gene GenBank ID: 818625 | Synthesized dimer: Ac(1-3)bDXylp Donor (ID 35536): Ac(1-?)Subst // Subst = CoA (substituted at S) Acceptor (ID 35539): -4)[aDGlcpA(1-2)]bDXylp(1- Status: indirect evidence in vivo
Confirmation methods: double mutation of tbl32/tbl33 ID: 1872 Notes: TBL32 and TBL33 are putative acetyltransferases mediating acetyl substitutions at O-3 of 2-O-GlcA-substituted xylosyl residues in xylan; they are also involved in xylan 3-O-monoacetylation and 2,3-di-O-acetylation. | Organism (ID 12415): Arabidopsis thaliana Organ/tissue: stem Full structure (ID 35540): | |
| Enzyme name: AtSAT UniProt ID: O64810.1 Gene name: SCPL10 / At2g23000 Gene GenBank ID: 816831 | Synthesized dimer: Sin(9-2)bDXylp Donor (ID 35490): ?DGlcp(1-9)xXSin? Acceptor (ID 35541): bDXylp(1-2)[xXpCoum(9-6)]bDGlcp(1-3)[xXMal(1-6)bDGlcp(1-5)]xXCyanidin Status: indirect evidence in vivo
Confirmation methods: mutation ID: 1873 Notes: NC: A9. AtSAT presumably participates in synthesis of A9 and xXSin?(9-2)bDXylp(1-2)[bDGlcp(1-4)xXpCoum(9-6)]bDGlcp(1-3)[xXMal(1-6)bDGlcp(1-5)]xXCyanidin (A11). | Organism (ID 12415): Arabidopsis thaliana Organ/tissue: leaf Full structure (ID 27596): CSDB ID(s): 60858, 60862, 60929, 61100 | Miyahara et al. 2013 DOI: 10.1016/j.jplph.2012.12.001 Fraser et al. 2007 DOI: 10.1104/pp.107.098970 Fraser et al. 2005 DOI: 10.1104/pp.104.057950 |
| Enzyme name: SCPL9/SST UniProt ID: O64811.1 Gene name: At2g23010 Gene GenBank ID: 816832 | Synthesized dimer: Sin(9-2)bDGlcp Donor (ID 35490): ?DGlcp(1-9)xXSin? Acceptor (ID 35542): bDGlcp(1-9)xXSin? Status: indirect evidence in vivo
Confirmation methods: mutation, complementation, overexpression ID: 1874 | Organism (ID 12415): Arabidopsis thaliana Organ/tissue: leaf, seedling, flower, silique Full structure (ID 27757): CSDB ID(s): 61111 | Fraser et al. 2007 DOI: 10.1104/pp.107.098970 Fraser et al. 2005 DOI: 10.1104/pp.104.057950 Lee et al. 2017 DOI: 10.1186/s13068-017-0725-0 |
| Synthesized dimer: Sin(9-4)bDFrup Status: indirect evidence in vivo
Confirmation methods: mutation, complementation, overexpression ID: 1875 Notes: The synthesized linkage is assumed | Organism (ID 12415): Arabidopsis thaliana Organ/tissue: leaf, seedling, flower, silique Full structure (ID 35543): | ||
| Enzyme name: SCPL13 UniProt ID: Q8H780.2 Gene name: At2g22980 Gene GenBank ID: 816829 | Synthesized dimer: Sin(9-2)bDGlcp Donor (ID 35490): ?DGlcp(1-9)xXSin? Acceptor (ID 35542): bDGlcp(1-9)xXSin? Status: indirect evidence in vivo
Confirmation methods: mutation ID: 1876 Notes: Minor activity | Organism (ID 12415): Arabidopsis thaliana Full structure (ID 27757): CSDB ID(s): 61111 | Fraser et al. 2007 DOI: 10.1104/pp.107.098970 Fraser et al. 2005 DOI: 10.1104/pp.104.057950 |
| Enzyme name: SNG1 UniProt ID: Q8RUW5.2 Gene name: SCPL8 / At2g22990 Gene GenBank ID: 816830 | Synthesized dimer: Sin(9-2)bDGlcp Donor (ID 35490): ?DGlcp(1-9)xXSin? Acceptor (ID 35542): bDGlcp(1-9)xXSin? Status: indirect evidence in vivo
Confirmation methods: mutation ID: 1877 Notes: Minor activity | Organism (ID 12415): Arabidopsis thaliana Organ/tissue: seedling, root Full structure (ID 27757): CSDB ID(s): 61111 | |
| Synthesized dimer: 2HOSuc(1-9)Sin Donor (ID 35544): x?2HOSuc Acceptor (ID 35542): bDGlcp(1-9)xXSin? Status: indirect evidence in vivo
Confirmation methods: mutation ID: 1878 | Organism (ID 12415): Arabidopsis thaliana Organ/tissue: seedling, root Full structure (ID 35545): Side product (ID 35387): | ||
| Enzyme name: APT1 UniProt ID: P31166 Gene name: APT1 Gene GenBank ID: 839636 | Synthesized dimer: bDRibf(1-9)Subst // Subst = adenine Donor (ID 35546): P-5)?DRibf(1-P-P Acceptor (ID 35547): Subst // Subst = adenine Status: evidence in vitro
Confirmation methods: in vitro (purified protein) ID: 1879 | Organism (ID 12415): Arabidopsis thaliana Organ/tissue: flower, leaf Full structure (ID 35548): | Allen et al. 2002 DOI: 10.1034/j.1399-3054.2002.1150106.x |
| Synthesized dimer: bDRibf(1-9)Subst // Subst = adenine Donor (ID 35546): P-5)?DRibf(1-P-P Acceptor (ID 35549): Bn(7-6)Subst // Subst = adenine Status: evidence in vitro
Confirmation methods: in vitro (purified protein) ID: 1880 Notes: Minor activity | Organism (ID 12415): Arabidopsis thaliana Organ/tissue: flower, leaf Full structure (ID 35550): | ||
| Synthesized dimer: bDRibf(1-9)Subst // Subst = isopentenyladenine Donor (ID 35546): P-5)?DRibf(1-P-P Acceptor (ID 35551): Subst // Subst = isopentenyladenine Status: evidence in vitro
Confirmation methods: in vitro (purified protein) ID: 1881 Notes: Minor activity | Organism (ID 12415): Arabidopsis thaliana Organ/tissue: flower, leaf Full structure (ID 35552): | ||
| Synthesized dimer: bDRibf(1-9)Subst // Subst = zeatin Donor (ID 35546): P-5)?DRibf(1-P-P Acceptor (ID 35553): Subst // Subst = zeatin Status: evidence in vitro
Confirmation methods: in vitro (purified protein) ID: 1882 Notes: Minor activity | Organism (ID 12415): Arabidopsis thaliana Organ/tissue: flower, leaf Full structure (ID 35554): | ||
| Enzyme name: APT2 UniProt ID: Q42563 Gene name: APT2 Gene GenBank ID: 844345 | Synthesized dimer: bDRibf(1-9)Subst // Subst = adenine Donor (ID 35546): P-5)?DRibf(1-P-P Acceptor (ID 35547): Subst // Subst = adenine Status: evidence in vitro
Confirmation methods: in vitro (purified protein) ID: 1883 | Organism (ID 12415): Arabidopsis thaliana Organ/tissue: flower, leaf Full structure (ID 35548): | |
| Synthesized dimer: bDRibf(1-9)Subst // Subst = adenine Donor (ID 35546): P-5)?DRibf(1-P-P Acceptor (ID 35549): Bn(7-6)Subst // Subst = adenine Status: evidence in vitro
Confirmation methods: in vitro (purified protein) ID: 1884 Notes: Minor activity | Organism (ID 12415): Arabidopsis thaliana Organ/tissue: flower, leaf Full structure (ID 35550): | ||
| Synthesized dimer: bDRibf(1-9)Subst // Subst = isopentenyladenine Donor (ID 35546): P-5)?DRibf(1-P-P Acceptor (ID 35551): Subst // Subst = isopentenyladenine Status: evidence in vitro
Confirmation methods: in vitro (purified protein) ID: 1885 Notes: Minor activity | Organism (ID 12415): Arabidopsis thaliana Organ/tissue: flower, leaf Full structure (ID 35552): | ||
| Synthesized dimer: bDRibf(1-9)Subst // Subst = zeatin Donor (ID 35546): P-5)?DRibf(1-P-P Acceptor (ID 35553): Subst // Subst = zeatin Status: evidence in vitro
Confirmation methods: in vitro (purified protein) ID: 1886 Notes: Minor activity | Organism (ID 12415): Arabidopsis thaliana Organ/tissue: flower, leaf Full structure (ID 35554): | ||
| Enzyme name: APT3 UniProt ID: Q9SUW2 Gene name: APT3 Gene GenBank ID: 828353 | Synthesized dimer: bDRibf(1-9)Subst // Subst = adenine Donor (ID 35546): P-5)?DRibf(1-P-P Acceptor (ID 35547): Subst // Subst = adenine Status: evidence in vitro
Confirmation methods: in vitro (purified protein) ID: 1887 | Organism (ID 12415): Arabidopsis thaliana Organ/tissue: flower, leaf Full structure (ID 35548): | |
| Synthesized dimer: bDRibf(1-9)Subst // Subst = adenine Donor (ID 35546): P-5)?DRibf(1-P-P Acceptor (ID 35549): Bn(7-6)Subst // Subst = adenine Status: evidence in vitro
Confirmation methods: in vitro (purified protein) ID: 1888 Notes: Minor activity | Organism (ID 12415): Arabidopsis thaliana Organ/tissue: flower, leaf Full structure (ID 35550): | ||
| Synthesized dimer: bDRibf(1-9)Subst // Subst = isopentenyladenine Donor (ID 35546): P-5)?DRibf(1-P-P Acceptor (ID 35551): Subst // Subst = isopentenyladenine Status: evidence in vitro
Confirmation methods: in vitro (purified protein) ID: 1889 Notes: Minor activity | Organism (ID 12415): Arabidopsis thaliana Organ/tissue: flower, leaf Full structure (ID 35552): | ||
| Synthesized dimer: bDRibf(1-9)Subst // Subst = zeatin Donor (ID 35546): P-5)?DRibf(1-P-P Acceptor (ID 35553): Subst // Subst = zeatin Status: evidence in vitro
Confirmation methods: in vitro (purified protein) ID: 1890 Notes: Minor activity | Organism (ID 12415): Arabidopsis thaliana Organ/tissue: flower, leaf Full structure (ID 35554): | ||
| Enzyme name: SQD2 UniProt ID: Q8S4F6 CAZy family: GT4 Gene name: SQD2 Gene GenBank ID: 831888 | Synthesized dimer: aDS6Quip(1-1)DGro Donor (ID 35555): aDS6Quip(1-P-P-5)xXnucU Acceptor (ID 35274): LIP(1-2)[LIP(1-3)]xDGro Status: direct evidence in vivo
Confirmation methods: expression in E.coli (as whole-cell biocatalyst), mutation ID: 1891 | Organism (ID 12415): Arabidopsis thaliana Organ/tissue: E.coli; leaf Full structure (ID 35556): | Yu et al. 2002 DOI: 10.1073 pnas.082696499 |
| Enzyme name: EPC1/GMT1 UniProt ID: Q9LY62 CAZy family: GT64 Gene name: EPC1/At3g55830 Gene GenBank ID: 824749 | Synthesized dimer: aDManp(1-4)aDGlcpA Acceptor (ID 35557): aDGlcpA(1-2)xXscylloIno(1-P-1)CER // CER = C18:1{2NH2,3OH,4OH,t8}/C24:1{2OH,c15} Status: indirect evidence in vivo
Confirmation methods: mutation, expression in yeast, expression in tobacco cells ID: 1892 | Organism (ID 12415): Arabidopsis thaliana Expressed in: S. cerevisiae, N. tabacum Full structure (ID 35558): | Fang et al. 2016 DOI: 10.1105/tpc.16.00186 |
| Enzyme name: ExAD UniProt ID: Q6NKR6 CAZy family: GT47 Gene name: At3g57630 Gene GenBank ID: 824932 | Synthesized dimer: aLAraf(1-3)bLAraf Donor (ID 35449): bLAraf(1-P-P-5)xXnucU Acceptor (ID 35559): bLAraf(1-2)bLAraf(1-2)bLAraf(1-4)x?Hyp? Status: indirect evidence in vivo
Confirmation methods: knockout, complementation ID: 1893 Notes: Donor is suggested. The enqyme is supposed to act on extensins. | Organism (ID 12415): Arabidopsis thaliana Full structure (ID 24097): CSDB ID(s): 147038 | Moller et al. 2017 DOI: 10.1038/srep45341 |
| Enzyme name: SUS1 UniProt ID: P49040 CAZy family: GT4 Gene name: SUS1 Gene GenBank ID: 832206 | Synthesized dimer: aDGlcp(1-?)P Donor (ID 35560): P-P-5)xXnucU Acceptor (ID 35561): aDGlcp(1-2)bDFruf Status: evidence in vitro
Confirmation methods: in vitro (purified protein) ID: 1894 Notes: AtSUS1 synthesizes UDP-glucose from sucrose and UDP. | Organism (ID 12415): Arabidopsis thaliana Full structure (ID 7931): CSDB ID(s): 23094 | Thapa et al. 2019 DOI: 10.1007/s00253-019-10060-5 |
| Enzyme name: 71C3 UniProt ID: Q9LML7.1 CAZy family: GT1 Gene name: UGT71C3 / AT1G07260 Gene GenBank ID: 837237 | Synthesized dimer: DGlcp(1-2)Sal Donor (ID 34839): ?DGlcp(1-P-P-5)xXnucU Acceptor (ID 34888): Me(1-7)xXSal Status: direct evidence in vivo
Confirmation methods: in vitro (purified protein), mutation (knockout), overexpression ID: 1895 Notes: Expression of UGT71C3 in leaves is induced by pathogen attack (Pseudomonas syringae) or treatment with methylsalicylic acid. | Organism (ID 12415): Arabidopsis thaliana Organ/tissue: leaf Full structure (ID 34889): | Chen et al. 2020a DOI: 10.1104/pp.19.00091 |
| Enzyme name: 73C5 UniProt ID: Q9ZQ94.1 CAZy family: GT1 Gene name: DOGT1 / At2g36800 Gene GenBank ID: 818252 | Synthesized dimer: bDGlcp(1-9)Subst // Subst = p-coumaryl alcohol Donor (ID 34839): ?DGlcp(1-P-P-5)xXnucU Acceptor (ID 34937): Subst // Subst = p-coumaryl alcohol Status: evidence in vitro
Confirmation methods: expression in E.coli (as whole-cell biocatalyst) ID: 1896 Notes: Product common name: triandrin. | Organism (ID 12415): Arabidopsis thaliana Expressed in: E. coli Full structure (ID 35006): | Bi et al. 2019 DOI: 10.1021/acssynbio.9b00219 |
| Synthesized dimer: bDGlcp(1-4)Subst // Subst = p-coumaryl alcohol Donor (ID 34839): ?DGlcp(1-P-P-5)xXnucU Acceptor (ID 34937): Subst // Subst = p-coumaryl alcohol Status: evidence in vitro
Confirmation methods: expression in E.coli (as whole-cell biocatalyst) ID: 1897 Notes: Product common name: triandrin B. | Organism (ID 12415): Arabidopsis thaliana Expressed in: E. coli Full structure (ID 35007): | ||
| Synthesized dimer: bDGlcp(1-3)Protopanaxadiol20s Donor (ID 34839): ?DGlcp(1-P-P-5)xXnucU Acceptor (ID 35008): xXProtopanaxadiol20s Status: evidence in vitro
Confirmation methods: in vitro (purified protein) ID: 1898 Notes: Product common name: ginsenoside Rh2. | Organism (ID 12415): Arabidopsis thaliana Full structure (ID 27785): CSDB ID(s): 44249, 47981, 63655, 64800, 65231, 65526, 66322, 67388 | Hu et al. 2020 DOI: 10.1016/j.jbiotec.2020.01.003 | |
| Synthesized dimer: bDGlcp(1-3)Protopanaxadiol20s Donor (ID 34839): ?DGlcp(1-P-P-5)xXnucU Acceptor (ID 35009): bDGlcp(1-20)xXProtopanaxadiol20s Status: evidence in vitro
Confirmation methods: in vitro (purified protein) ID: 1899 Notes: Product common name: ginsenoside F2. | Organism (ID 12415): Arabidopsis thaliana Full structure (ID 18047): CSDB ID(s): 43453, 44247, 47980, 61250, 64802, 66320, 67985, 119224 | ||
| Enzyme name: 74B1 UniProt ID: O48676 CAZy family: GT1 Gene name: UGT74B1 / AT1G24100 Gene GenBank ID: 839022 | Synthesized dimer: DGlcp(1-1')Subst // Subst = phenylpropanothiohydroximate Donor (ID 34898): aDGlcp(1-P-P-5)xXnucU Acceptor (ID 35047): Subst // Subst = phenylpropanothiohydroximate Status: evidence in vitro
Confirmation methods: in vitro (purified protein), mutation (in vitro) ID: 1900 Notes: Glc C1 is linked to S atom at -C(=NOH)S. | Organism (ID 12415): Arabidopsis thaliana Full structure (ID 35048): | Latife et al. 2019 DOI: 10.1016/j.mcat.2019.110631 |
| Synthesized dimer: DGlcp(1-8)Subst // Subst = phenylacetohydroximate Donor (ID 34898): aDGlcp(1-P-P-5)xXnucU Acceptor (ID 35049): Subst // Subst = phenylacetohydroximate Status: evidence in vitro
Confirmation methods: in vitro (purified protein), mutation (in vitro) ID: 1901 Notes: the catalytic turnover is dramatically decreased when swapping the sulfur atom for the oxygen atom, as kcat of a hydroximate is 100-fold lower than the one for the corresponding thiohydroximate. | Organism (ID 12415): Arabidopsis thaliana Full structure (ID 35050): | ||
| Synthesized dimer: DGlcp(1-9)Subst // Subst = phenylpropanoxyhydroximate Donor (ID 34898): aDGlcp(1-P-P-5)xXnucU Acceptor (ID 35051): Subst // Subst = phenylpropanoxyhydroximate Status: evidence in vitro
Confirmation methods: in vitro (purified protein), mutation (in vitro) ID: 1902 Notes: the catalytic turnover is dramatically decreased when swapping the sulfur atom for the oxygen atom, as kcat of a hydroximate is 100-fold lower than the one for the corresponding thiohydroximate. | Organism (ID 12415): Arabidopsis thaliana Full structure (ID 35052): | ||
| Synthesized dimer: DGlcp(1-1')Subst // Subst = thiophenol Donor (ID 34898): aDGlcp(1-P-P-5)xXnucU Acceptor (ID 35053): Subst // Subst = thiophenol Status: evidence in vitro
Confirmation methods: in vitro (purified protein) ID: 1903 | Organism (ID 12415): Arabidopsis thaliana Full structure (ID 35054): | ||
| Synthesized dimer: DGlcp(1-1)Subst // Subst = 2,3-dichlorophenol Donor (ID 34898): aDGlcp(1-P-P-5)xXnucU Acceptor (ID 35055): Subst // Subst = 2,3-dichlorophenol Status: evidence in vitro
Confirmation methods: in vitro (purified protein) ID: 1904 | Organism (ID 12415): Arabidopsis thaliana Full structure (ID 35056): | ||
| Synthesized dimer: DGlcp(1-1)Subst // Subst = 2,4-dichlorophenol Donor (ID 34898): aDGlcp(1-P-P-5)xXnucU Acceptor (ID 34910): Subst // Subst = 2,4-dichlorophenol Status: evidence in vitro
Confirmation methods: in vitro (purified protein) ID: 1905 | Organism (ID 12415): Arabidopsis thaliana Full structure (ID 34911): | ||
| Synthesized dimer: DGlcp(1-1)Subst // Subst = 2,5-dichlorophenol Donor (ID 34898): aDGlcp(1-P-P-5)xXnucU Acceptor (ID 35057): Subst // Subst = 2,5-dichlorophenol Status: evidence in vitro
Confirmation methods: in vitro (purified protein) ID: 1906 | Organism (ID 12415): Arabidopsis thaliana Full structure (ID 35058): | ||
| Synthesized dimer: DGlcp(1-1)Subst // Subst = 2,4,6-trichlorophenol Donor (ID 34898): aDGlcp(1-P-P-5)xXnucU Acceptor (ID 35059): Subst // Subst = 2,4,6-trichlorophenol Status: evidence in vitro
Confirmation methods: in vitro (purified protein) ID: 1907 | Organism (ID 12415): Arabidopsis thaliana Full structure (ID 35060): | ||
| Synthesized dimer: DGlcp(1-1)Subst // Subst = 2,3,4-trichlorophenol Donor (ID 34898): aDGlcp(1-P-P-5)xXnucU Acceptor (ID 34916): Subst // Subst = 2,3,4-trichlorophenol Status: evidence in vitro
Confirmation methods: in vitro (purified protein) ID: 1908 | Organism (ID 12415): Arabidopsis thaliana Full structure (ID 34917): | ||
| Enzyme name: 74F1 UniProt ID: O22820.1 CAZy family: GT1 Gene name: UGT74F1 / AT2G43840 Gene GenBank ID: 818988 | Synthesized dimer: DGlcp(1-16)16HOPam Donor (ID 34839): ?DGlcp(1-P-P-5)xXnucU Acceptor (ID 35094): lX16HOPam Status: evidence in vitro
Confirmation methods: in vitro (purified protein) ID: 1909 | Organism (ID 12415): Arabidopsis thaliana Full structure (ID 35095): | Haroth et al. 2019 DOI: 10.1074/jbc.RA119.007600 |
| Enzyme name: 76C5 UniProt ID: Q9FI97.1 CAZy family: GT1 Gene name: AT5G05890 Gene GenBank ID: 830474 | Synthesized dimer: Ara(1-1')Subst // Subst = nicotinic acid (N-linked) = SMILES O=C(O)C1=C{51}[N+]([H])=CC=C1 Donor (ID 35128): ??Ara?(1-P-P-5)xXnucU Acceptor (ID 35126): Subst // Subst = nicotinic acid (N-linked) = SMILES O=C(O)C1=C{51}[N+]([H])=CC=C1 Status: evidence in vitro
Confirmation methods: in vitro (purified protein), mutation (in vitro) ID: 1910 Notes: N-conjugating activity towards nicotinic acid | Organism (ID 12415): Arabidopsis thaliana Organ/tissue: seed, seedling (root) Full structure (ID 35129): | Liu et al. 2019 DOI: 10.3389/fpls.2019.01164 Li et al. 2016 DOI: 10.1105/tpc.15.00224 |
| Synthesized dimer: Xyl(1-1')Subst // Subst = nicotinic acid (N-linked) = SMILES O=C(O)C1=C{51}[N+]([H])=CC=C1 Donor (ID 34839): ?DGlcp(1-P-P-5)xXnucU Acceptor (ID 35126): Subst // Subst = nicotinic acid (N-linked) = SMILES O=C(O)C1=C{51}[N+]([H])=CC=C1 Status: evidence in vitro
Confirmation methods: in vitro (purified protein), mutation (in vitro) ID: 1911 Notes: N-conjugating activity towards nicotinic acid | Organism (ID 12415): Arabidopsis thaliana Organ/tissue: seed, seedling (root) Full structure (ID 35130): | Liu et al. 2019 DOI: 10.3389/fpls.2019.01164 Li et al. 2017a DOI: 10.1105/tpc.15.00225 | |
| Synthesized dimer: Rhap(1-1')Subst // Subst = nicotinic acid (N-linked) = SMILES O=C(O)C1=C{51}[N+]([H])=CC=C1 Donor (ID 35131): ??Rhap(1-P-P-5)xXnucU Acceptor (ID 35126): Subst // Subst = nicotinic acid (N-linked) = SMILES O=C(O)C1=C{51}[N+]([H])=CC=C1 Status: indirect evidence in vivo
Confirmation methods: mutation ID: 1912 Notes: N-conjugating activity towards nicotinic acid | Organism (ID 12415): Arabidopsis thaliana Organ/tissue: seed, seedling (root) Full structure (ID 35132): | Liu et al. 2019 DOI: 10.3389/fpls.2019.01164 Li et al. 2018 DOI: 10.1105/tpc.15.00226 | |
| Enzyme name: 76E1 UniProt ID: Q9LTH3.1 CAZy family: GT1 Gene name: UGT76E1 / AT5G59580 Gene GenBank ID: 836077 | Synthesized dimer: DGlcp(1-12)Subst // Subst = 12-hydroxyjasmonic acid Donor (ID 34839): ?DGlcp(1-P-P-5)xXnucU Acceptor (ID 35135): Subst // Subst = 12-hydroxyjasmonic acid Status: direct evidence in vivo
Confirmation methods: in vitro (purified protein); mutation ID: 1913 Notes: UGT76E1 is highly specific toward 12-hydroxyjasmonic acid. | Organism (ID 12415): Arabidopsis thaliana Full structure (ID 35136): | Haroth et al. 2019 DOI: 10.1074/jbc.RA119.007600 |
| Synthesized dimer: DGlcp(1-16)16HOPam Donor (ID 34839): ?DGlcp(1-P-P-5)xXnucU Acceptor (ID 35094): lX16HOPam Status: evidence in vitro
Confirmation methods: in vitro (purified protein) ID: 1914 | Organism (ID 12415): Arabidopsis thaliana Full structure (ID 35095): | ||
| Synthesized dimer: DGlcp(1-13)Subst // Subst = 13-hydroxy-9,11,15-octadecatrienoic acid Donor (ID 34839): ?DGlcp(1-P-P-5)xXnucU Acceptor (ID 35137): Subst // Subst = 13-hydroxy-9,11,15-octadecatrienoic acid Status: evidence in vitro
Confirmation methods: in vitro (purified protein) ID: 1915 | Organism (ID 12415): Arabidopsis thaliana Full structure (ID 35138): | ||
| Synthesized dimer: DGlcp(1-11)Subst // Subst = 11-hydroxy-7,9,13-hexadecatrienoic acid Donor (ID 34839): ?DGlcp(1-P-P-5)xXnucU Acceptor (ID 35139): Subst // Subst = 11-hydroxy-7,9,13-hexadecatrienoic acid Status: evidence in vitro
Confirmation methods: in vitro (purified protein) ID: 1916 | Organism (ID 12415): Arabidopsis thaliana Full structure (ID 35140): | ||
| Enzyme name: 76E2 UniProt ID: Q9LTH2.1 CAZy family: GT1 Gene name: UGT76E2 / AT5G59590 Gene GenBank ID: 836078 | Synthesized dimer: DGlcp(1-12)Subst // Subst = 12-hydroxyjasmonic acid Donor (ID 34839): ?DGlcp(1-P-P-5)xXnucU Acceptor (ID 35135): Subst // Subst = 12-hydroxyjasmonic acid Status: evidence in vitro
Confirmation methods: in vitro (purified protein) ID: 1917 | Organism (ID 12415): Arabidopsis thaliana Full structure (ID 35136): | |
| Synthesized dimer: DGlcp(1-16)16HOPam Donor (ID 34839): ?DGlcp(1-P-P-5)xXnucU Acceptor (ID 35094): lX16HOPam Status: evidence in vitro
Confirmation methods: in vitro (purified protein) ID: 1918 | Organism (ID 12415): Arabidopsis thaliana Full structure (ID 35095): | ||
| Synthesized dimer: DGlcp(1-13)Subst // Subst = 13-hydroxy-9,11,15-octadecatrienoic acid Donor (ID 34839): ?DGlcp(1-P-P-5)xXnucU Acceptor (ID 35137): Subst // Subst = 13-hydroxy-9,11,15-octadecatrienoic acid Status: evidence in vitro
Confirmation methods: in vitro (purified protein) ID: 1919 | Organism (ID 12415): Arabidopsis thaliana Full structure (ID 35138): | ||
| Synthesized dimer: DGlcp(1-11)Subst // Subst = 11-hydroxy-7,9,13-hexadecatrienoic acid Donor (ID 34839): ?DGlcp(1-P-P-5)xXnucU Acceptor (ID 35139): Subst // Subst = 11-hydroxy-7,9,13-hexadecatrienoic acid Status: evidence in vitro
Confirmation methods: in vitro (purified protein) ID: 1920 | Organism (ID 12415): Arabidopsis thaliana Full structure (ID 35140): | ||
| Synthesized dimer: DGlcp(1-9)Subst // Subst = 9-hydroxy-(10E,12Z,15Z)-10,12,15-octadecatrienoic acid Donor (ID 34839): ?DGlcp(1-P-P-5)xXnucU Acceptor (ID 35141): Subst // Subst = 9-hydroxy-(10E,12Z,15Z)-10,12,15-octadecatrienoic acid Status: evidence in vitro
Confirmation methods: in vitro (purified protein) ID: 1921 | Organism (ID 12415): Arabidopsis thaliana Full structure (ID 35142): | ||
| Enzyme name: 76E11 UniProt ID: Q9SNB1.1 CAZy family: GT1 Gene name: UGT76E11 / AT3G46670 Gene GenBank ID: 823820 | Synthesized dimer: DGlcp(1-16)16HOPam Donor (ID 34839): ?DGlcp(1-P-P-5)xXnucU Acceptor (ID 35094): lX16HOPam Status: evidence in vitro
Confirmation methods: in vitro (purified protein) ID: 1922 | Organism (ID 12415): Arabidopsis thaliana Full structure (ID 35095): | |
| Synthesized dimer: DGlcp(1-9)Subst // Subst = 9-hydroxy-(10E,12Z,15Z)-10,12,15-octadecatrienoic acid Donor (ID 34839): ?DGlcp(1-P-P-5)xXnucU Acceptor (ID 35141): Subst // Subst = 9-hydroxy-(10E,12Z,15Z)-10,12,15-octadecatrienoic acid Status: evidence in vitro
Confirmation methods: in vitro (purified protein) ID: 1923 | Organism (ID 12415): Arabidopsis thaliana Full structure (ID 35142): | ||
| Synthesized dimer: DGlcp(1-13)Subst // Subst = 13-hydroxy-9,11,15-octadecatrienoic acid Donor (ID 34839): ?DGlcp(1-P-P-5)xXnucU Acceptor (ID 35137): Subst // Subst = 13-hydroxy-9,11,15-octadecatrienoic acid Status: evidence in vitro
Confirmation methods: in vitro (purified protein) ID: 1924 | Organism (ID 12415): Arabidopsis thaliana Full structure (ID 35138): | ||
| Enzyme name: 76E12 UniProt ID: Q94AB5.1 CAZy family: GT1 Gene name: UGT76E12 / AT3G46660 Gene GenBank ID: 823819 | Synthesized dimer: DGlcp(1-12)Subst // Subst = 12-hydroxyjasmonic acid Donor (ID 34839): ?DGlcp(1-P-P-5)xXnucU Acceptor (ID 35135): Subst // Subst = 12-hydroxyjasmonic acid Status: evidence in vitro
Confirmation methods: in vitro (purified protein) ID: 1925 | Organism (ID 12415): Arabidopsis thaliana Full structure (ID 35136): | |
| Synthesized dimer: DGlcp(1-16)16HOPam Donor (ID 34839): ?DGlcp(1-P-P-5)xXnucU Acceptor (ID 35094): lX16HOPam Status: evidence in vitro
Confirmation methods: in vitro (purified protein) ID: 1926 | Organism (ID 12415): Arabidopsis thaliana Full structure (ID 35095): | ||
| Synthesized dimer: DGlcp(1-13)Subst // Subst = 13-hydroxy-9,11,15-octadecatrienoic acid Donor (ID 34839): ?DGlcp(1-P-P-5)xXnucU Acceptor (ID 35137): Subst // Subst = 13-hydroxy-9,11,15-octadecatrienoic acid Status: evidence in vitro
Confirmation methods: in vitro (purified protein) ID: 1927 | Organism (ID 12415): Arabidopsis thaliana Full structure (ID 35138): | ||
| Synthesized dimer: DGlcp(1-11)Subst // Subst = 11-hydroxy-7,9,13-hexadecatrienoic acid Donor (ID 34839): ?DGlcp(1-P-P-5)xXnucU Acceptor (ID 35139): Subst // Subst = 11-hydroxy-7,9,13-hexadecatrienoic acid Status: evidence in vitro
Confirmation methods: in vitro (purified protein) ID: 1928 | Organism (ID 12415): Arabidopsis thaliana Full structure (ID 35140): | ||
| Synthesized dimer: DGlcp(1-9)Subst // Subst = 9-hydroxy-(10E,12Z,15Z)-10,12,15-octadecatrienoic acid Donor (ID 34839): ?DGlcp(1-P-P-5)xXnucU Acceptor (ID 35141): Subst // Subst = 9-hydroxy-(10E,12Z,15Z)-10,12,15-octadecatrienoic acid Status: evidence in vitro
Confirmation methods: in vitro (purified protein) ID: 1929 | Organism (ID 12415): Arabidopsis thaliana Full structure (ID 35142): | ||
| Enzyme name: 76F1 UniProt ID: Q9M052 CAZy family: GT1 Gene name: UGT76F1/AT3G55700 Gene GenBank ID: 824736 | Synthesized dimer: DGlcp(1-1')Subst // Subst = indole-3-pyruvic acid = SMILES C1=CC=C2C(=C1)C(=C{1}N2)CC(=O){51}C(=O)O Donor (ID 34839): ?DGlcp(1-P-P-5)xXnucU Acceptor (ID 35146): Subst // Subst = indole-3-pyruvic acid = SMILES C1=CC=C2C(=C1)C(=C{1}N2)CC(=O){51}C(=O)O Status: direct evidence in vivo
Confirmation methods: in vitro (purified protein); overexpression, mutation (knockout) ID: 1930 Notes: UGT76F1 Is transcriptionally up-regulated by light signal. UGT76F1 participates in the regulation of auxin homeostasis. | Organism (ID 12415): Arabidopsis thaliana Full structure (ID 35147): | Chen et al. 2020c DOI: 10.1073/pnas.2000172117 |
| Enzyme name: 89C1 UniProt ID: Q9LNE6.1 CAZy family: GT1 Gene name: AT1G06000 Gene GenBank ID: 837109 | Synthesized dimer: aLRhap(1-7)Kaempferol Donor (ID 35294): bLRhap(1-P-P-5)xXnucU Acceptor (ID 34951): xXKaempferol Status: evidence in vitro
Confirmation methods: in vitro (purified protein) ID: 1931 | Organism (ID 12415): Arabidopsis thaliana Full structure (ID 26603): CSDB ID(s): 61904, 66249, 66990, 146644 | Zong et al. 2019a DOI: 10.1016/j.pep.2018.12.007 Zong et al. 2019b DOI: 10.1111/tpj.14321 |
| Enzyme name: PBP1A UniProt ID: P02918* CAZy family: GT51 Gene name: mrcA / ponA Gene GenBank ID: 947907* | Synthesized dimer: bMurp(1-4)bDGlcpN Donor (ID 35562): Ac(1-2)bDGlcpN(1-4)[xDAla?(2-1)xDAla?(2-1)xLLys(2-5)xDGlu(2-1)xLAla?(2-8),Ac(1-2)]aXMurp(1-P-P-1)Subst // Subst = 3,7,11,15,19,23,27-heptamethyl-octacosa-2Z,6Z,10Z,14Z,18E,22E,26-heptaen-1-ol Acceptor (ID 35562): Ac(1-2)bDGlcpN(1-4)[xDAla?(2-1)xDAla?(2-1)xLLys(2-5)xDGlu(2-1)xLAla?(2-8),Ac(1-2)]aXMurp(1-P-P-1)Subst // Subst = 3,7,11,15,19,23,27-heptamethyl-octacosa-2Z,6Z,10Z,14Z,18E,22E,26-heptaen-1-ol Status: evidence in vitro
Confirmation methods: in vitro (purified protein) ID: 2000 Notes: Lipid II is utilized as donor/substrate. Lipid II derivatives may vary. N of murein units varied from 2 to >20; relatively long glycan chains appeared without significant accumulation of short products. The limiting length was about 30 units (Lipid 60). PBP2 stimulated the GTase activity of PBP1A. | Organism (ID 20): Escherichia coli Full structure (ID 35563): Molecule role (analog of): peptidoglycan | Barrett et al. 2007 DOI: 10.1074/jbc.M705440200 Banzhaf et al. 2012 DOI: 10.1111/j.1365-2958.2012.08103.x Paradis-Bleau et al. 2010 DOI: 10.1016/j.cell.2010.11.037 Wang et al. 2008 DOI: 10.1021/ja806016y Egan et al. 2015 DOI: 10.1098/rstb.2015.0031 |
| Synthesized dimer: bMurp(1-4)bDGlcpN Donor (ID 35564): Ac(1-2)bDGlcpN(1-4)[xDAla?(2-1)xDAla?(2-1)xLLys(2-5)xDGlu(2-1)xLAla?(2-8),Ac(1-2)]bXMurp(1-4)[Ac(1-2)]bDGlcpN(1-4)[xDAla?(2-1)xDAla?(2-1)xLLys(2-5)xDGlu(2-1)xLAla?(2-8),Ac(1-2)]aXMurp(1-P-P-1)Subst // Subst = 3,7,11,15,19,23,27-heptamethyl-octacosa-2Z,6Z,10Z,14Z,18E,22E,26-heptaen-1-ol Acceptor (ID 35564): Ac(1-2)bDGlcpN(1-4)[xDAla?(2-1)xDAla?(2-1)xLLys(2-5)xDGlu(2-1)xLAla?(2-8),Ac(1-2)]bXMurp(1-4)[Ac(1-2)]bDGlcpN(1-4)[xDAla?(2-1)xDAla?(2-1)xLLys(2-5)xDGlu(2-1)xLAla?(2-8),Ac(1-2)]aXMurp(1-P-P-1)Subst // Subst = 3,7,11,15,19,23,27-heptamethyl-octacosa-2Z,6Z,10Z,14Z,18E,22E,26-heptaen-1-ol Status: evidence in vitro
Confirmation methods: in vitro (purified protein) ID: 2001 Notes: Lipid IV is utilized as donor/substrate. N of murein units was 4, 6, and 8; short products accumulated before longer products appeared. | Organism (ID 20): Escherichia coli Full structure (ID 35565): Molecule role (analog of): peptidoglycan | Barrett et al. 2007 DOI: 10.1074/jbc.M705440200 Egan et al. 2015 DOI: 10.1098/rstb.2015.0031 | |
| Synthesized dimer: bMurp(1-4)bDGlcpN Donor (ID 35566): Ac(1-2)bDGlcpN(1-4)[xDAla?(2-1)xDAla?(2-1)[Ac(1-6)]xLLys(2-5)xDGlu(2-1)xLAla?(2-8),Ac(1-2)]bXMurp(1-4)[Ac(1-2)]bDGlcpN(1-4)[xDAla?(2-1)xDAla?(2-1)[Ac(1-6)]xLLys(2-5)xDGlu(2-1)xLAla?(2-8),Ac(1-2)]aXMurp(1-P-P-1)Subst // Subst = 3,7,11,15,19,23,27-heptamethyl-octacosa-2Z,6Z,10Z,14Z,18E,22E,26-heptaen-1-ol Acceptor (ID 35566): Ac(1-2)bDGlcpN(1-4)[xDAla?(2-1)xDAla?(2-1)[Ac(1-6)]xLLys(2-5)xDGlu(2-1)xLAla?(2-8),Ac(1-2)]bXMurp(1-4)[Ac(1-2)]bDGlcpN(1-4)[xDAla?(2-1)xDAla?(2-1)[Ac(1-6)]xLLys(2-5)xDGlu(2-1)xLAla?(2-8),Ac(1-2)]aXMurp(1-P-P-1)Subst // Subst = 3,7,11,15,19,23,27-heptamethyl-octacosa-2Z,6Z,10Z,14Z,18E,22E,26-heptaen-1-ol Status: evidence in vitro
Confirmation methods: in vitro (purified protein) ID: 2002 Notes: Acetylated Lipid IV is utilized as donor/substrate. | Organism (ID 20): Escherichia coli Full structure (ID 35567): Molecule role (analog of): peptidoglycan | Egan et al. 2015 DOI: 10.1098/rstb.2015.0031 Zhang et al. 2007 DOI: 10.1021/ja069060g | |
| Synthesized dimer: bMurp(1-4)bDGlcpN Donor (ID 35568): Ac(1-2)bDGlcpN(1-4)[xDAla?(2-1)xDAla?(2-1)[Ac(1-6)]xLLys(2-5)xDGlu(2-1)xLAla?(2-8),Ac(1-2)]aXMurp(1-P-P-1)Subst // Subst = 3,7,11,15,19,23,27-heptamethyl-octacosa-2Z,6Z,10Z,14Z,18E,22E,26-heptaen-1-ol Acceptor (ID 35568): Ac(1-2)bDGlcpN(1-4)[xDAla?(2-1)xDAla?(2-1)[Ac(1-6)]xLLys(2-5)xDGlu(2-1)xLAla?(2-8),Ac(1-2)]aXMurp(1-P-P-1)Subst // Subst = 3,7,11,15,19,23,27-heptamethyl-octacosa-2Z,6Z,10Z,14Z,18E,22E,26-heptaen-1-ol Status: evidence in vitro
Confirmation methods: in vitro (purified protein) ID: 2003 Notes: Acetylated Lipid II is utilized as donor/substrate. | Organism (ID 20): Escherichia coli Exact full structure is unknown Molecule role (analog of): peptidoglycan | Egan et al. 2015 DOI: 10.1098/rstb.2015.0031 Lupoli et al. 2014 DOI: 10.1021/ja410813j | |
| Synthesized dimer: bMurp(1-4)bDGlcpN Donor (ID 35562): Ac(1-2)bDGlcpN(1-4)[xDAla?(2-1)xDAla?(2-1)xLLys(2-5)xDGlu(2-1)xLAla?(2-8),Ac(1-2)]aXMurp(1-P-P-1)Subst // Subst = 3,7,11,15,19,23,27-heptamethyl-octacosa-2Z,6Z,10Z,14Z,18E,22E,26-heptaen-1-ol Acceptor (ID 35562): Ac(1-2)bDGlcpN(1-4)[xDAla?(2-1)xDAla?(2-1)xLLys(2-5)xDGlu(2-1)xLAla?(2-8),Ac(1-2)]aXMurp(1-P-P-1)Subst // Subst = 3,7,11,15,19,23,27-heptamethyl-octacosa-2Z,6Z,10Z,14Z,18E,22E,26-heptaen-1-ol Status: evidence in vitro
Confirmation methods: in vitro (purified protein), mutation (in recombinant protein) ID: 2004 Notes: PBP1A oligomerized lipid II to glycan strands and formed peptide cross-links. Lipid II derivatives may vary. | Organism (ID 4014): Escherichia coli MC1061 Full structure (ID 35563): Molecule role (analog of): peptidoglycan | Egan et al. 2015 DOI: 10.1098/rstb.2015.0031 Born et al. 2006 DOI: 10.1074/jbc.M604083200 | |
| Synthesized dimer: bMurp(1-4)bDGlcpN Donor (ID 35569): Ac(1-2)bDGlcpN(1-4)[xDAla?(2-1)xDAla?(2-1)xLLys(2-5)xDGlu(2-1)xLAla?(2-8),Ac(1-2)]aXMurp(1-P-P-1)Subst // Subst = 3,7,11,15,19,23,27,31,35,39,43-undecamethyl-tetratetraconta-2Z,6Z,10Z,14Z,18Z,22Z,26Z,30Z,34E,38E,42-undecaen-1-ol Acceptor (ID 35570): b?Galp(1-4)[Ac(1-2)]bDGlcpN(1-4)[xDAla?(2-1)xDAla?(2-1)xLLys(2-5)xDGlu(2-1)xLAla?(2-8),Ac(1-2)]aXMurp(1-P-P-1)Subst // Subst = 3,7,11,15,19,23,27,31,35,39,43-undecamethyl-tetratetraconta-2Z,6Z,10Z,14Z,18Z,22Z,26Z,30Z,34E,38E,42-undecaen-1-ol Status: evidence in vitro
Confirmation methods: in vitro (purified protein) ID: 2005 Notes: N of murein units varied from 3 to higher. The study was aimed at revealing the direction of chain elongation. | Organism (ID 20): Escherichia coli Full structure (ID 35571): Molecule role (analog of): peptidoglycan | Egan et al. 2015 DOI: 10.1098/rstb.2015.0031 Perlstein et al. 2007 DOI: 10.1021/ja075965y | |
| Enzyme name: PBP1B UniProt ID: P02919* CAZy family: GT51 Gene name: mrcB / ponB Gene GenBank ID: 944843 | Synthesized dimer: bMurp(1-4)bDGlcpN Donor (ID 35562): Ac(1-2)bDGlcpN(1-4)[xDAla?(2-1)xDAla?(2-1)xLLys(2-5)xDGlu(2-1)xLAla?(2-8),Ac(1-2)]aXMurp(1-P-P-1)Subst // Subst = 3,7,11,15,19,23,27-heptamethyl-octacosa-2Z,6Z,10Z,14Z,18E,22E,26-heptaen-1-ol Acceptor (ID 35566): Ac(1-2)bDGlcpN(1-4)[xDAla?(2-1)xDAla?(2-1)[Ac(1-6)]xLLys(2-5)xDGlu(2-1)xLAla?(2-8),Ac(1-2)]bXMurp(1-4)[Ac(1-2)]bDGlcpN(1-4)[xDAla?(2-1)xDAla?(2-1)[Ac(1-6)]xLLys(2-5)xDGlu(2-1)xLAla?(2-8),Ac(1-2)]aXMurp(1-P-P-1)Subst // Subst = 3,7,11,15,19,23,27-heptamethyl-octacosa-2Z,6Z,10Z,14Z,18E,22E,26-heptaen-1-ol Status: evidence in vitro
Confirmation methods: in vitro (purified protein) ID: 2006 Notes: One of suggested products is shown. PBP1b did not utilize Lipid IV as a substrate unless Lipid II was also included in the reaction mixture. | Organism (ID 16357): Escherichia coli K12 MG1655 Full structure (ID 35572): Molecule role (analog of): peptidoglycan | Egan et al. 2015 DOI: 10.1098/rstb.2015.0031 Zhang et al. 2007 DOI: 10.1021/ja069060g |
| Synthesized dimer: bMurp(1-4)bDGlcpN Donor (ID 35562): Ac(1-2)bDGlcpN(1-4)[xDAla?(2-1)xDAla?(2-1)xLLys(2-5)xDGlu(2-1)xLAla?(2-8),Ac(1-2)]aXMurp(1-P-P-1)Subst // Subst = 3,7,11,15,19,23,27-heptamethyl-octacosa-2Z,6Z,10Z,14Z,18E,22E,26-heptaen-1-ol Acceptor (ID 35562): Ac(1-2)bDGlcpN(1-4)[xDAla?(2-1)xDAla?(2-1)xLLys(2-5)xDGlu(2-1)xLAla?(2-8),Ac(1-2)]aXMurp(1-P-P-1)Subst // Subst = 3,7,11,15,19,23,27-heptamethyl-octacosa-2Z,6Z,10Z,14Z,18E,22E,26-heptaen-1-ol Status: direct evidence in vivo
Confirmation methods: in vitro (purified protein), mutation (in recombinant protein), deletion, peptidoglycan synthesis in ether-permeabilized cells ID: 2007 Notes: Lipid II is utilized as donor/substrate. Lipid II derivatives may vary. Under conditions at which PBP1B dimerized, the enzyme synthesized murein with long glycan strands (>25 disaccharide units) and with almost 50% of the peptides being part of cross-links. The limiting length was about 50 units (Lipid 100). | Organism (ID 20): Escherichia coli Full structure (ID 35563): Molecule role (analog of): peptidoglycan | Banzhaf et al. 2012 DOI: 10.1111/j.1365-2958.2012.08103.x Paradis-Bleau et al. 2010 DOI: 10.1016/j.cell.2010.11.037 Wang et al. 2008 DOI: 10.1021/ja806016y Egan et al. 2015 DOI: 10.1098/rstb.2015.0031 Terrak et al. 1999 DOI: 10.1046/j.1365-2958.1999.01612. Terrak et al. 2008 DOI: 10.1074/jbc.M803223200 Barrett et al. 2004 DOI: 10.1021/bi049142m Bertsche et al. DOI: 10.1074/jbc.M508646200 | |
| Synthesized dimer: bMurp(1-4)bDGlcpN Donor (ID 35568): Ac(1-2)bDGlcpN(1-4)[xDAla?(2-1)xDAla?(2-1)[Ac(1-6)]xLLys(2-5)xDGlu(2-1)xLAla?(2-8),Ac(1-2)]aXMurp(1-P-P-1)Subst // Subst = 3,7,11,15,19,23,27-heptamethyl-octacosa-2Z,6Z,10Z,14Z,18E,22E,26-heptaen-1-ol Acceptor (ID 35568): Ac(1-2)bDGlcpN(1-4)[xDAla?(2-1)xDAla?(2-1)[Ac(1-6)]xLLys(2-5)xDGlu(2-1)xLAla?(2-8),Ac(1-2)]aXMurp(1-P-P-1)Subst // Subst = 3,7,11,15,19,23,27-heptamethyl-octacosa-2Z,6Z,10Z,14Z,18E,22E,26-heptaen-1-ol Status: evidence in vitro
Confirmation methods: in vitro (purified protein) ID: 2008 Notes: Acetylated Lipid II is utilized as donor/substrate. | Organism (ID 20): Escherichia coli Exact full structure is unknown Molecule role (analog of): peptidoglycan | Egan et al. 2015 DOI: 10.1098/rstb.2015.0031 Lupoli et al. 2014 DOI: 10.1021/ja410813j | |
| Synthesized dimer: bMurp(1-4)bDGlcpN Donor (ID 35569): Ac(1-2)bDGlcpN(1-4)[xDAla?(2-1)xDAla?(2-1)xLLys(2-5)xDGlu(2-1)xLAla?(2-8),Ac(1-2)]aXMurp(1-P-P-1)Subst // Subst = 3,7,11,15,19,23,27,31,35,39,43-undecamethyl-tetratetraconta-2Z,6Z,10Z,14Z,18Z,22Z,26Z,30Z,34E,38E,42-undecaen-1-ol Acceptor (ID 35570): b?Galp(1-4)[Ac(1-2)]bDGlcpN(1-4)[xDAla?(2-1)xDAla?(2-1)xLLys(2-5)xDGlu(2-1)xLAla?(2-8),Ac(1-2)]aXMurp(1-P-P-1)Subst // Subst = 3,7,11,15,19,23,27,31,35,39,43-undecamethyl-tetratetraconta-2Z,6Z,10Z,14Z,18Z,22Z,26Z,30Z,34E,38E,42-undecaen-1-ol Status: evidence in vitro
Confirmation methods: in vitro (purified protein) ID: 2009 Notes: N of murein units varied from 3 to higher. The study was aimed at revealing the direction of chain elongation. | Organism (ID 20): Escherichia coli Full structure (ID 35571): Molecule role (analog of): peptidoglycan | Egan et al. 2015 DOI: 10.1098/rstb.2015.0031 Perlstein et al. 2007 DOI: 10.1021/ja075965y | |
| Synthesized dimer: bMurp(1-4)bDGlcpN Donor (ID 35573): Ac(1-2)bDGlcpN(1-4)[xDAla?(2-1)xDAla?(2-1)xXmPmN2(2-5)xDGlu(2-1)xLAla?(2-8),Ac(1-2)]aXMurp(1-P-P-1)Subst // Subst = 3,7,11,15,19,23,27,31,35,39,43-undecamethyl-tetratetraconta-2Z,6Z,10Z,14Z,18Z,22Z,26Z,30Z,34E,38E,42-undecaen-1-ol Acceptor (ID 35574): b?Galp(1-4)[Ac(1-2)]bDGlcpN(1-4)[xDAla?(2-1)xDAla?(2-1)xXmPmN2(2-5)xDGlu(2-1)xLAla?(2-8),Ac(1-2)]aXMurp(1-P-P-1)Subst // Subst = 3,7,11,15,19,23,27,31,35,39,43-undecamethyl-tetratetraconta-2Z,6Z,10Z,14Z,18Z,22Z,26Z,30Z,34E,38E,42-undecaen-1-ol Status: evidence in vitro
Confirmation methods: in vitro (purified protein) ID: 2010 | Organism (ID 20): Escherichia coli Full structure (ID 35575): Molecule role (analog of): peptidoglycan | Fraipont et al. 2006 DOI: 10.1021/bi051055m | |
| Synthesized dimer: bMurp(1-4)bDGlcpN Donor (ID 35576): Ac(1-2)bDGlcpN(1-4)[xDAla?(2-1)xDAla?(2-1)xXmPmN2(2-5)xDGlu(2-1)xLAla?(2-8),Ac(1-2)]aXMurp(1-P-P-5)xXnucU Acceptor (ID 35574): b?Galp(1-4)[Ac(1-2)]bDGlcpN(1-4)[xDAla?(2-1)xDAla?(2-1)xXmPmN2(2-5)xDGlu(2-1)xLAla?(2-8),Ac(1-2)]aXMurp(1-P-P-1)Subst // Subst = 3,7,11,15,19,23,27,31,35,39,43-undecamethyl-tetratetraconta-2Z,6Z,10Z,14Z,18Z,22Z,26Z,30Z,34E,38E,42-undecaen-1-ol Status: evidence in vitro
Confirmation methods: in vitro (purified protein) ID: 2011 Notes: The donor substrate does not absolutely require the lipid chain which can be replaced by uridine. The enzyme appears to prefer an acceptor substrate containing a polyprenyl pyrophosphate on C1 of the MurNAc sugar. | Organism (ID 20): Escherichia coli Full structure (ID 35575): Molecule role (analog of): peptidoglycan | ||
| Enzyme name: MurG UniProt ID: P17443* CAZy family: GT28 Gene GenBank ID: 946321* | Synthesized dimer: bDGlcpN(1-4)aMurp Donor (ID 35041): Ac(1-2)aDGlcpN(1-P-P-5)xXnucU Acceptor (ID 35577): xDAla?(2-1)xDAla?(2-1)[Subst1(1-6)]xLLys(2-5)xDGlu(2-1)xLAla?(2-8)[Ac(1-2)]aXMurp(1-P-P-1)Subst2 // Subst1 = 6-((biotynoyl)amino)hexanoic acid (amide); Subst2 = (R)-3,7-dimethyloct-6-en-1-ol Status: evidence in vitro
Confirmation methods: in vitro (purified protein) ID: 2013 | Organism (ID 20): Escherichia coli Full structure (ID 35578): Molecule role (analog of): peptidoglycan | Ha et al. 1999 DOI: 10.1021/ja991556t |
| Synthesized dimer: bDGlcpN(1-4)aMurp Donor (ID 35041): Ac(1-2)aDGlcpN(1-P-P-5)xXnucU Acceptor (ID 35579): xDAla?(2-1)xDAla?(2-1)xLLys(2-5)xDGlu(2-1)xLAla?(2-8)[Ac(1-2)]aXMurp(1-P-P-1)Subst // Subst = (R)-3,7-dimethyloct-6-en-1-ol Status: evidence in vitro
Confirmation methods: in vitro (purified protein) ID: 2014 | Organism (ID 20): Escherichia coli Full structure (ID 35580): Molecule role (analog of): peptidoglycan | Chen et al. 2002 DOI: 10.1021/bi0256678 Cudic et al. 2001 DOI: 10.1016/S0960-894X(01)00653-9 Hu et al. 2004 DOI: 10.1016/j.chembiol .2004.02.024 Ye et al. 2001 DOI: 10.1021/ja010028q | |
| Synthesized dimer: bDGlcpN(1-4)aMurp Donor (ID 35041): Ac(1-2)aDGlcpN(1-P-P-5)xXnucU Acceptor (ID 35581): xDAla?(2-1)xDAla?(2-1)xLLys(2-5)xDGlu(2-1)xLAla?(2-8)[Ac(1-2)]aXMurp(1-P-P-1)Subst // Subst = (S)-3,7-dimethyloct-6-en-1-ol Status: evidence in vitro
Confirmation methods: in vitro (purified protein) ID: 2015 | Organism (ID 20): Escherichia coli Full structure (ID 35582): Molecule role (analog of): peptidoglycan | Chen et al. 2002 DOI: 10.1021/bi0256678 | |
| Synthesized dimer: bDGlcpN(1-4)aMurp Donor (ID 35041): Ac(1-2)aDGlcpN(1-P-P-5)xXnucU Acceptor (ID 35583): xDAla?(2-1)xDAla?(2-1)xLLys(2-5)xDGlu(2-1)xLAla?(2-8)[Ac(1-2)]aXMurp(1-P-P-1)Subst // Subst = 3,7-dimethylocta-2Z,6-dien-1-ol Status: evidence in vitro
Confirmation methods: in vitro (purified protein) ID: 2016 | Organism (ID 20): Escherichia coli Full structure (ID 35584): Molecule role (analog of): peptidoglycan | ||
| Synthesized dimer: bDGlcpN(1-4)aMurp Donor (ID 35041): Ac(1-2)aDGlcpN(1-P-P-5)xXnucU Acceptor (ID 35585): xDAla?(2-1)xDAla?(2-1)xLLys(2-5)xDGlu(2-1)xLAla?(2-8)[Ac(1-2)]aXMurp(1-P-P-1)Subst // Subst = 3,7,11-trimethyldodeca-2Z,6E,10-trien-1-ol Status: evidence in vitro
Confirmation methods: in vitro (purified protein) ID: 2017 | Organism (ID 20): Escherichia coli Full structure (ID 35586): Molecule role (analog of): peptidoglycan | ||
| Synthesized dimer: bDGlcpN(1-4)aMurp Donor (ID 35041): Ac(1-2)aDGlcpN(1-P-P-5)xXnucU Acceptor (ID 35587): xDAla?(2-1)xDAla?(2-1)xLLys(2-5)xDGlu(2-1)xLAla?(2-8)aXMurp(1-P-P-1)Subst // Subst = 3,7,11,15-tetramethylhexadeca-2Z,6E,10E,14-tetraen-1-ol Status: evidence in vitro
Confirmation methods: in vitro (purified protein) ID: 2018 | Organism (ID 20): Escherichia coli Full structure (ID 35588): Molecule role (analog of): peptidoglycan | ||
| Synthesized dimer: bDGlcpN(1-4)aMurp Donor (ID 35041): Ac(1-2)aDGlcpN(1-P-P-5)xXnucU Acceptor (ID 35589): xDAla?(2-1)xDAla?(2-1)xLLys(2-5)xDGlu(2-1)xLAla?(2-8)[Ac(1-2)]aXMurp(1-P-P-1)Subst // Subst = 3,7,11,15-tetramethylhexadeca-2Z,6Z,10Z,14-tetraen-1-ol Status: evidence in vitro
Confirmation methods: in vitro (purified protein) ID: 2019 | Organism (ID 20): Escherichia coli Full structure (ID 35590): Molecule role (analog of): peptidoglycan | ||
| Synthesized dimer: bDGlcpN(1-4)aMurp Donor (ID 35041): Ac(1-2)aDGlcpN(1-P-P-5)xXnucU Acceptor (ID 35591): xDAla?(2-1)xDAla?(2-1)xLLys(2-5)xDGlu(2-1)xLAla?(2-8)aXMurp(1-P-P-1)Subst // Subst = eicosanol Status: evidence in vitro
Confirmation methods: in vitro (purified protein) ID: 2020 | Organism (ID 20): Escherichia coli Full structure (ID 35592): Molecule role (analog of): peptidoglycan | ||
| Synthesized dimer: bDGlcpN(1-4)aMurp Donor (ID 35041): Ac(1-2)aDGlcpN(1-P-P-5)xXnucU Acceptor (ID 35593): xDAla?(2-1)xDAla?(2-1)xLLys(2-5)xDGlu(2-1)xLAla?(2-8)[Ac(1-2)]aXMurp(1-P-P-1)Subst // Subst = 3,7,11,15,19,23,27-heptamethyl-octacosa-2E,6E,10E,14E,18E,22E,26-heptaen-1-ol Status: evidence in vitro
Confirmation methods: in vitro (purified protein) ID: 2021 | Organism (ID 20): Escherichia coli Full structure (ID 35594): Molecule role (analog of): peptidoglycan | ||
| Synthesized dimer: bDGlcpN(1-4)aMurp Donor (ID 35041): Ac(1-2)aDGlcpN(1-P-P-5)xXnucU Acceptor (ID 35595): xDAla?(2-1)xDAla?(2-1)xLLys(2-5)xDGlu(2-1)xLAla?(2-8)[Ac(1-2)]aXMurp(1-P-P-1)Subst // Subst = (2E,6E)-3,7,11-trimethyldodeca-2,6,10-trien-1-ol (farnesol) Status: evidence in vitro
Confirmation methods: in vitro (purified protein) ID: 2022 | Organism (ID 20): Escherichia coli Full structure (ID 35596): Molecule role (analog of): peptidoglycan | Hu et al. 2004 DOI: 10.1016/j.chembiol .2004.02.024 Ye et al. 2001 DOI: 10.1021/ja010028q | |
| Synthesized dimer: bDGlcpN(1-4)aMurp Donor (ID 35041): Ac(1-2)aDGlcpN(1-P-P-5)xXnucU Acceptor (ID 35597): xDAla?(2-1)xDAla?(2-1)xLLys(2-5)xDGlu(2-1)xLAla?(2-8)[Ac(1-2)]aXMurp(1-P-P-1)Subst // Subst = geranylnerol Status: evidence in vitro
Confirmation methods: in vitro (purified protein) ID: 2023 | Organism (ID 20): Escherichia coli Full structure (ID 35598): Molecule role (analog of): peptidoglycan | Ye et al. 2001 DOI: 10.1021/ja010028q | |
| Synthesized dimer: bDGlcpN(1-4)aMurp Donor (ID 35041): Ac(1-2)aDGlcpN(1-P-P-5)xXnucU Acceptor (ID 35599): xDAla?(2-1)xDAla?(2-1)xLLys(2-5)xDGlu(2-1)xLAla?(2-8)[Ac(1-2)]aXMurp(1-P-P-1)Subst // Subst = betulaheptaprenol Status: evidence in vitro
Confirmation methods: in vitro (purified protein) ID: 2024 | Organism (ID 20): Escherichia coli Full structure (ID 35600): Molecule role (analog of): peptidoglycan | ||
| Synthesized dimer: bDGlcpN(1-4)aMurp Donor (ID 35041): Ac(1-2)aDGlcpN(1-P-P-5)xXnucU Acceptor (ID 35601): xDAla?(2-1)xDAla?(2-1)xLLys(2-5)xDGlu(2-1)xLAla?(2-8)[Ac(1-2)]aXMurp(1-P-P-1)Subst // Subst = solanesol Status: evidence in vitro
Confirmation methods: in vitro (purified protein) ID: 2025 | Organism (ID 20): Escherichia coli Full structure (ID 35602): Molecule role (analog of): peptidoglycan | ||
| Synthesized dimer: bDGlcpN(1-4)aMurp Donor (ID 35041): Ac(1-2)aDGlcpN(1-P-P-5)xXnucU Acceptor (ID 35603): xDAla?(2-1)xDAla?(2-1)xLLys(2-5)xDGlu(2-1)xLAla?(2-8)[Ac(1-2)]aXMurp(1-P-P-1)Subst // Subst = 3,7,11,15,19,23,27,31,35,39,43-undecamethyl-tetratetraconta-2Z,6Z,10Z,14Z,18Z,22Z,26Z,30Z,34E,38E,42-undecaen-1-ol Status: evidence in vitro
Confirmation methods: in vitro (purified protein) ID: 2026 | Organism (ID 20): Escherichia coli Exact full structure is unknown Molecule role (analog of): peptidoglycan | Ha et al. 1999 DOI: 10.1021/ja991556t Ye et al. 2001 DOI: 10.1021/ja010028q Liu et al. 2003 DOI: 10.1002/cbic.200300557 | |
| Synthesized dimer: bDGlcpN(1-4)aMurp Donor (ID 35041): Ac(1-2)aDGlcpN(1-P-P-5)xXnucU Acceptor (ID 35604): xDAla?(2-1)xDAla?(2-1)xLLys(2-5)xDGlu(2-1)xLAla?(2-8)[Ac(1-2)]aXMurp(1-P-P-1)Bu Status: evidence in vitro
Confirmation methods: in vitro (purified protein) ID: 2027 | Organism (ID 20): Escherichia coli Full structure (ID 35605): Molecule role (analog of): peptidoglycan | Liu et al. 2003 DOI: 10.1002/cbic.200300557 | |
| Synthesized dimer: bDGlcpN(1-4)aMurp Donor (ID 35041): Ac(1-2)aDGlcpN(1-P-P-5)xXnucU Acceptor (ID 35606): xDAla?(2-1)xDAla?(2-1)xLLys(2-5)xDGlu(2-1)xLAla?(2-8)[Ac(1-2)]aXMurp(1-P-P-1)Subst // Subst = (R)-2,7-dimethyloct-6-en-1-ol Status: evidence in vitro
Confirmation methods: in vitro (purified protein) ID: 2028 | Organism (ID 20): Escherichia coli Full structure (ID 35607): Molecule role (analog of): peptidoglycan | ||
| Synthesized dimer: bDGlcpN(1-4)aMurp Donor (ID 35041): Ac(1-2)aDGlcpN(1-P-P-5)xXnucU Acceptor (ID 35608): xDAla?(2-1)xDAla?(2-1)xLLys(2-5)xDGlu(2-1)xLAla?(2-8)[Ac(1-2)]aXMurp(1-P-P-1)Und Status: evidence in vitro
Confirmation methods: in vitro (purified protein) ID: 2029 | Organism (ID 20): Escherichia coli Full structure (ID 35609): Molecule role (analog of): peptidoglycan | ||
| Synthesized dimer: bDGlcpN(1-4)aMurp Donor (ID 35041): Ac(1-2)aDGlcpN(1-P-P-5)xXnucU Acceptor (ID 35610): xDAla?(2-1)xDAla?(2-1)xLLys(2-5)xDGlu(2-1)xLAla?(2-8)[Ac(1-2)]aXMurp(1-P-P-1)Dod Status: evidence in vitro
Confirmation methods: in vitro (purified protein) ID: 2030 | Organism (ID 20): Escherichia coli Full structure (ID 35611): Molecule role (analog of): peptidoglycan | ||
| Synthesized dimer: bDGlcpN(1-4)aMurp Donor (ID 35041): Ac(1-2)aDGlcpN(1-P-P-5)xXnucU Acceptor (ID 35612): xDAla?(2-1)xDAla?(2-1)xLLys(2-5)xDGlu(2-1)xLAla?(2-8)[Ac(1-2)]aXMurp(1-P-P-1)Subst // Subst = eicosanol Status: evidence in vitro
Confirmation methods: in vitro (purified protein) ID: 2031 | Organism (ID 20): Escherichia coli Full structure (ID 35592): Molecule role (analog of): peptidoglycan | ||
| Synthesized dimer: bDGlcpN(1-4)aMurp Donor (ID 35041): Ac(1-2)aDGlcpN(1-P-P-5)xXnucU Acceptor (ID 35613): xDAla?(2-1)xDAla?(2-1)xLLys(2-5)xDGlu(2-1)xLAla?(2-8)[Ac(1-2)]aXMurp(1-P-P-1)Subst // Subst = 4-nitrophenol = SMILES C1=C{1}C(=CC=C1[N+](=O)[O-])O Status: evidence in vitro
Confirmation methods: in vitro (purified protein) ID: 2032 | Organism (ID 20): Escherichia coli Full structure (ID 35614): Molecule role (analog of): peptidoglycan | ||
| Synthesized dimer: bDGlcpN(1-4)aMurp Donor (ID 35041): Ac(1-2)aDGlcpN(1-P-P-5)xXnucU Acceptor (ID 35615): xDAla?(2-1)xDAla?(2-1)xLLys(2-5)xDGlu(2-1)xLAla?(2-8)[Ac(1-2)]aXMurp(1-P-P-1)Subst // Subst = (2Z,5Z,8Z)-3,6,9,13-tetramethyltetradeca-2,5,8,12-tetraen-1-ol Status: evidence in vitro
Confirmation methods: in vitro (purified protein) ID: 2033 | Organism (ID 20): Escherichia coli Full structure (ID 35616): Molecule role (analog of): peptidoglycan | ||
| Synthesized dimer: bDGlcpN(1-4)aMurp Donor (ID 35226): Ac(1-2)?DGlcpN(1-P-P-5)xXnucU Acceptor (ID 35617): xDAla?(2-1)xDAla?(2-1)xLLys(2-5)xDGlu(2-1)xLAla?(2-8)[Ac(1-2)]aXMurp(1-P-P-1)[Ph(1-11)]Subst // Subst = undecan-1,11-diol Status: direct evidence in vivo
Confirmation methods: in vitro (purified protein), mutation ID: 2034 Notes: Structures of pentapeptide may vary. | Organism (ID 20): Escherichia coli Full structure (ID 35618): Molecule role: peptidoglycan | Zawadzke et al. 2003 DOI: 10.1016/S0003-2697(02)00622-X Trunkfield et al. 2010 DOI: 10.1016/j.bmc.2010.02.026 van der Laan et al. 2003 DOI: 10.1128/JB.185.13.3773-3779.2003 Mengin-Lecreulx et al. 1999 | |
| Synthesized dimer: bDGlcpN(1-4)aMurp Donor (ID 35226): Ac(1-2)?DGlcpN(1-P-P-5)xXnucU Acceptor (ID 35617): xDAla?(2-1)xDAla?(2-1)xLLys(2-5)xDGlu(2-1)xLAla?(2-8)[Ac(1-2)]aXMurp(1-P-P-1)[Ph(1-11)]Subst // Subst = undecan-1,11-diol Status: evidence in vitro
Confirmation methods: in vitro (purified protein) ID: 2035 Notes: Structures of pentapeptide may vary. | Organism (ID 16358): Escherichia coli JM83 Full structure (ID 35618): Molecule role (analog of): peptidoglycan | Crouvoisier et al. 1999 DOI: 10.1016/S0014-5793(99)00412-3 | |
| Enzyme name: WfaP Group: WfgD UniProt ID: Q077R2* CAZy family: GT2 Gene cluster ID: DQ220293 | Synthesized dimer: bDGlcp(1-3)aDGlcpN Donor (ID 34839): ?DGlcp(1-P-P-5)xXnucU Acceptor (ID 35619): Ac(1-2)aDGlcpN(1-P-P-1)[Ph(1-11)]Subst // Subst = undecan-1,11-diol Status: evidence in vitro
Confirmation methods: in vitro (membrane fraction) ID: 2036 | Organism (ID 16359): Escherichia coli O56 G1068 Full structure (ID 35620): Molecule role (analog of): O-antigen | Brockhausen et al. 2008b DOI: 10.1128/JB.00160-08 |
| Synthesized dimer: bDGlcp(1-3)aDGlcpN Donor (ID 34839): ?DGlcp(1-P-P-5)xXnucU Acceptor (ID 35621): Ac(1-2)aDGlcpN(1-P-P-1)[Ph(1-6)]Subst // Subst = hexan-1,6-diol Status: evidence in vitro
Confirmation methods: in vitro (membrane fraction) ID: 2037 | Organism (ID 16359): Escherichia coli O56 G1068 Full structure (ID 35622): Molecule role (analog of): O-antigen | ||
| Synthesized dimer: bDGlcp(1-3)aDGlcpN Donor (ID 34839): ?DGlcp(1-P-P-5)xXnucU Acceptor (ID 35623): Ac(1-2)aDGlcpN(1-P-P-1)[Ph(1-16)]Subst // Subst = hexadecan-1,16-diol Status: evidence in vitro
Confirmation methods: in vitro (membrane fraction) ID: 2038 | Organism (ID 16359): Escherichia coli O56 G1068 Full structure (ID 35624): Molecule role (analog of): O-antigen | ||
| Synthesized dimer: bDGlcp(1-3)aDGlcpN Donor (ID 34839): ?DGlcp(1-P-P-5)xXnucU Acceptor (ID 35625): Ac(1-2)aDGlcpN(1-P-P-1)Dec Status: evidence in vitro
Confirmation methods: in vitro (membrane fraction) ID: 2039 | Organism (ID 16359): Escherichia coli O56 G1068 Full structure (ID 35626): Molecule role (analog of): O-antigen | ||
| Synthesized dimer: bDGlcp(1-3)bDGlcpN Donor (ID 34839): ?DGlcp(1-P-P-5)xXnucU Status: predicted in silico
Confirmation methods: in silico ID: 2040 Notes: Repeating unit of the O56 antigen. | Organism (ID 763): Escherichia coli O56 Full structure (ID 35627): CSDB ID(s): 20438 Molecule role: O-antigen | Brockhausen et al. 2008b DOI: 10.1128/JB.00160-08 Cheng et al. 2006a DOI: 10.1007/s00284-006-0032-7 | |
| Enzyme name: WfgD UniProt ID: B5L3F2* CAZy family: GT2 | Synthesized dimer: bDGlcp(1-3)aDGlcpN Donor (ID 34839): ?DGlcp(1-P-P-5)xXnucU Acceptor (ID 35619): Ac(1-2)aDGlcpN(1-P-P-1)[Ph(1-11)]Subst // Subst = undecan-1,11-diol Status: evidence in vitro
Confirmation methods: in vitro (membrane fraction) ID: 2041 | Organism (ID 16360): Escherichia coli O152 G1104 Full structure (ID 35620): Molecule role (analog of): O-antigen | Brockhausen et al. 2008b DOI: 10.1128/JB.00160-08 Zhou et al. 2010 DOI: 10.3724/SP.J.1096.2010.00225 |
| Synthesized dimer: bDGlcp(1-3)aDGlcpN Donor (ID 34839): ?DGlcp(1-P-P-5)xXnucU Acceptor (ID 35621): Ac(1-2)aDGlcpN(1-P-P-1)[Ph(1-6)]Subst // Subst = hexan-1,6-diol Status: evidence in vitro
Confirmation methods: in vitro (membrane fraction) ID: 2042 | Organism (ID 16360): Escherichia coli O152 G1104 Full structure (ID 35622): Molecule role (analog of): O-antigen | Brockhausen et al. 2008b DOI: 10.1128/JB.00160-08 | |
| Synthesized dimer: bDGlcp(1-3)aDGlcpN Donor (ID 34839): ?DGlcp(1-P-P-5)xXnucU Acceptor (ID 35623): Ac(1-2)aDGlcpN(1-P-P-1)[Ph(1-16)]Subst // Subst = hexadecan-1,16-diol Status: evidence in vitro
Confirmation methods: in vitro (membrane fraction) ID: 2043 | Organism (ID 16360): Escherichia coli O152 G1104 Full structure (ID 35624): Molecule role (analog of): O-antigen | ||
| Synthesized dimer: bDGlcp(1-3)aDGlcpN Donor (ID 34839): ?DGlcp(1-P-P-5)xXnucU Acceptor (ID 35625): Ac(1-2)aDGlcpN(1-P-P-1)Dec Status: evidence in vitro
Confirmation methods: in vitro (membrane fraction) ID: 2044 | Organism (ID 16360): Escherichia coli O152 G1104 Full structure (ID 35626): CSDB ID(s): 10116 Molecule role (analog of): O-antigen | ||
| Synthesized dimer: bDGlcp(1-3)bDGlcpN Donor (ID 34839): ?DGlcp(1-P-P-5)xXnucU Status: predicted in silico
Confirmation methods: in silico ID: 2045 Notes: Repeating unit of the O152 antigen. | Organism (ID 2445): Escherichia coli O152 Full structure (ID 2739): CSDB ID(s): 1893, 3192, 10116, 20689, 21771, 22850, 23078, 27499, 31913 Molecule role: O-antigen | Brockhausen et al. 2008b DOI: 10.1128/JB.00160-08 Liu et al. 2008 DOI: 10.1111/j.1574-6976.2008.00114.x | |
| Enzyme name: WfgE UniProt ID: B5L3F3* CAZy family: GT4 Gene name: wfgE Gene cluster ID: EU294170.1 | Synthesized dimer: aDGlcp(1-2)bDGlcp Donor (ID 34839): ?DGlcp(1-P-P-5)xXnucU Status: suggested
Confirmation methods: based on the structure found in vivo ID: 2046 | Organism (ID 2445): Escherichia coli O152 Full structure (ID 2739): CSDB ID(s): 1893, 3192, 10116, 20689, 21771, 22850, 23078, 27499, 31913 | Dong et al. 2020 DOI: 10.1007/s10719-020-09907-1 |
| Synthesized dimer: aDGlcp(1-2)bDGlcp Donor (ID 34839): ?DGlcp(1-P-P-5)xXnucU Acceptor (ID 35628): bDGlcp(1-3)[Ac(1-2)]aDGlcpN(1-P-P-1)Nn Status: evidence in vitro
Confirmation methods: in vitro (purified protein) ID: 2047 Notes: 100% conversion with this acceptor substrate. 100% specific activity with this donor substrate. | Organism (ID 2445): Escherichia coli O152 Full structure (ID 35629): | ||
| Synthesized dimer: aDGlcp(1-2)bDGlcp Donor (ID 35630): ?DGlcp(1-P-P-5)xXnucT Acceptor (ID 35628): bDGlcp(1-3)[Ac(1-2)]aDGlcpN(1-P-P-1)Nn Status: evidence in vitro
Confirmation methods: in vitro (purified protein) ID: 2048 Notes: 10% specific activity with this donor substrate. | Organism (ID 2445): Escherichia coli O152 Full structure (ID 35629): | ||
| Synthesized dimer: DGalp(1-2)bDGlcp Donor (ID 35273): ?DGalp(1-P-P-5)xXnucU Acceptor (ID 35628): bDGlcp(1-3)[Ac(1-2)]aDGlcpN(1-P-P-1)Nn Status: evidence in vitro
Confirmation methods: in vitro (purified protein) ID: 2049 Notes: 80% specific activity with this donor substrate. | Organism (ID 2445): Escherichia coli O152 Full structure (ID 35631): | ||
| Synthesized dimer: aDGlcp(1-2)bDGalp Donor (ID 34839): ?DGlcp(1-P-P-5)xXnucU Acceptor (ID 35632): bDGalp(1-3)[Ac(1-2)]aDGlcpN(1-P-P-1)Nn Status: evidence in vitro
Confirmation methods: in vitro (purified protein) ID: 2050 Notes: 60% conversion with this acceptor substrate. | Organism (ID 2445): Escherichia coli O152 Full structure (ID 35633): | ||
| Synthesized dimer: aDGlcp(1-2)bDGlcp Donor (ID 34839): ?DGlcp(1-P-P-5)xXnucU Acceptor (ID 35634): bDGlcp(1-3)[Ac(1-2)]aDGalpN(1-P-P-1)Nn Status: evidence in vitro
Confirmation methods: in vitro (purified protein) ID: 2051 Notes: 50% conversion with this acceptor substrate. | Organism (ID 2445): Escherichia coli O152 Full structure (ID 35635): | ||
| Synthesized dimer: aDGlcp(1-2)bDGalp Donor (ID 34839): ?DGlcp(1-P-P-5)xXnucU Acceptor (ID 35636): bDGalp(1-4)[Ac(1-2)]aDGlcpN(1-P-P-1)Nn Status: evidence in vitro
Confirmation methods: in vitro (purified protein) ID: 2052 Notes: 40% conversion with this acceptor substrate. | Organism (ID 2445): Escherichia coli O152 Full structure (ID 35637): | ||
| Synthesized dimer: aDGlcp(1-2)bDGalp Donor (ID 34839): ?DGlcp(1-P-P-5)xXnucU Acceptor (ID 35638): bDGalp(1-3)[Ac(1-2)]aDGalpN(1-P-P-1)Nn Status: evidence in vitro
Confirmation methods: in vitro (purified protein) ID: 2053 Notes: 32% conversion with this acceptor substrate. | Organism (ID 2445): Escherichia coli O152 Full structure (ID 35639): | ||
| Synthesized dimer: aDGlcp(1-2)aLRhap Donor (ID 34839): ?DGlcp(1-P-P-5)xXnucU Acceptor (ID 35640): aLRhap(1-3)[Ac(1-2)]aDGlcpN(1-P-P-1)Nn Status: evidence in vitro
Confirmation methods: in vitro (purified protein) ID: 2054 Notes: 5% conversion with this acceptor substrate. | Organism (ID 2445): Escherichia coli O152 Full structure (ID 35641): | ||
| Enzyme name: WbbA UniProt ID: A0A0H3MEU9* Gene name: wbbA Gene GenBank ID: 7153128* | Synthesized dimer: bDQuip4N(1-2)aDManp Status: predicted in silico
Confirmation methods: in silico ID: 2055 | Organism (ID 16361): Escherichia coli O7:K1 VW187 Full structure (ID 274): CSDB ID(s): 1385, 1508, 2162, 2719, 7494, 10463, 10610, 10871, 11786, 20641, 23054, 29648, 30268, 108701, 114155, 116994 Molecule role: O-antigen | Marolda et al. 1999 DOI: 10.1099/00221287-145-9-2485 |
| Enzyme name: WbbB UniProt ID: A0A0H3MJG1* Gene name: wbbB Gene GenBank ID: 7153146* | Synthesized dimer: aLRhap(1-3)aDManp Status: predicted in silico
Confirmation methods: in silico ID: 2056 | Organism (ID 16361): Escherichia coli O7:K1 VW187 Full structure (ID 274): CSDB ID(s): 1385, 1508, 2162, 2719, 7494, 10463, 10610, 10871, 11786, 20641, 23054, 29648, 30268, 108701, 114155, 116994 Molecule role: O-antigen | |
| Enzyme name: WbbC UniProt ID: A0A0H3MNM6* Gene name: wbbC Gene GenBank ID: 7153168* | Synthesized dimer: aDManp(1-4)bDGalp Status: predicted in silico
Confirmation methods: in silico ID: 2057 | Organism (ID 16361): Escherichia coli O7:K1 VW187 Full structure (ID 274): CSDB ID(s): 1385, 1508, 2162, 2719, 7494, 10463, 10610, 10871, 11786, 20641, 23054, 29648, 30268, 108701, 114155, 116994 Molecule role: O-antigen | |
| Enzyme name: WbbD UniProt ID: Q03084* CAZy family: GT2 | Synthesized dimer: bDGalp(1-3)aDGlcpN Donor (ID 35273): ?DGalp(1-P-P-5)xXnucU Acceptor (ID 35619): Ac(1-2)aDGlcpN(1-P-P-1)[Ph(1-11)]Subst // Subst = undecan-1,11-diol Status: evidence in vitro
Confirmation methods: in vitro (crude extract) ID: 2058 | Organism (ID 16361): Escherichia coli O7:K1 VW187 Full structure (ID 35642): Molecule role (analog of): O-antigen | Riley et al. 2005 DOI: 10.1093/glycob/cwi038 Montoya-Peleaz et al. 2005 DOI: 10.1016/j.bmcl.2004.11.077 Brockhausen et al. 2008a DOI: 10.1007/s10719-008-9127-7 |
| Synthesized dimer: bDGalp(1-3)aDGlcpN Donor (ID 35273): ?DGalp(1-P-P-5)xXnucU Acceptor (ID 35643): Ac(1-2)aDGlcpN(1-P-P-1)Subst // Subst = undecaprenol Status: indirect evidence in vivo
Confirmation methods: mutation, overexpression ID: 2059 | Organism (ID 16361): Escherichia coli O7:K1 VW187 Full structure (ID 35644): Molecule role (analog of, precursor of): O-antigen | Riley et al. 2005 DOI: 10.1093/glycob/cwi038 Brockhausen et al. 2008a DOI: 10.1007/s10719-008-9127-7 | |
| Synthesized dimer: bDGalp(1-3)aDGlcpN Donor (ID 35273): ?DGalp(1-P-P-5)xXnucU Acceptor (ID 35621): Ac(1-2)aDGlcpN(1-P-P-1)[Ph(1-6)]Subst // Subst = hexan-1,6-diol Status: evidence in vitro
Confirmation methods: in vitro (crude extract) ID: 2060 | Organism (ID 16361): Escherichia coli O7:K1 VW187 Full structure (ID 35645): Molecule role (analog of): O-antigen | Brockhausen et al. 2008a DOI: 10.1007/s10719-008-9127-7 | |
| Synthesized dimer: bDGalp(1-3)aDGlcpN Donor (ID 35273): ?DGalp(1-P-P-5)xXnucU Acceptor (ID 35623): Ac(1-2)aDGlcpN(1-P-P-1)[Ph(1-16)]Subst // Subst = hexadecan-1,16-diol Status: evidence in vitro
Confirmation methods: in vitro (crude extract) ID: 2061 | Organism (ID 16361): Escherichia coli O7:K1 VW187 Full structure (ID 35646): Molecule role (analog of): O-antigen | ||
| Synthesized dimer: bDGalp(1-3)aDGlcpN Donor (ID 35273): ?DGalp(1-P-P-5)xXnucU Acceptor (ID 35647): Ac(1-2)aDGlcpN(1-P-1)[Ph(1-11)]Subst // Subst = undecan-1,11-diol Status: evidence in vitro
Confirmation methods: in vitro (crude extract) ID: 2062 | Organism (ID 16361): Escherichia coli O7:K1 VW187 Full structure (ID 35648): Molecule role (analog of): O-antigen | ||
| Enzyme name: WbwC UniProt ID: Q93NP5* CAZy family: GT2 | Synthesized dimer: bDGalp(1-3)aDGalpN Donor (ID 35273): ?DGalp(1-P-P-5)xXnucU Acceptor (ID 35649): Ac(1-2)aDGalpN(1-P-P-1)[Ph(1-11)]Subst // Subst = undecan-1,11-diol Status: evidence in vitro
Confirmation methods: in vitro (purified protein), mutation (in recombinant protein) ID: 2063 | Organism (ID 16362): Escherichia coli O104 G1629 Full structure (ID 35650): Molecule role (analog of): O-antigen | Wang et al. 2014 DOI: 10.1128/JB.01698-14 |
| Synthesized dimer: bDGalp(1-3)aDGalpN Donor (ID 35273): ?DGalp(1-P-P-5)xXnucU Acceptor (ID 35651): Ac(1-2)aDGalpN(1-P-P-1)Subst // Subst = 11-(anthracen-9-ylmethoxy)undecan-1-diol Status: evidence in vitro
Confirmation methods: in vitro (purified protein) ID: 2064 | Organism (ID 16362): Escherichia coli O104 G1629 Full structure (ID 35652): Molecule role (analog of): O-antigen | ||
| Enzyme name: WbwC Group: WbbD UniProt ID: Q93NP5* CAZy family: GT2 Gene name: wbwC Gene cluster ID: AF361371 | Synthesized dimer: bDGalp(1-3)bDGalpN Donor (ID 35273): ?DGalp(1-P-P-5)xXnucU Status: predicted in silico
Confirmation methods: in silico ID: 2065 Notes: Repeating unit of the O104 antigen. | Organism (ID 851): Escherichia coli O104 Full structure (ID 35653): CSDB ID(s): 20671 Molecule role: O-antigen | Wang et al. 2014 DOI: 10.1128/JB.01698-14 Wang et al. 2001 DOI: 10.1016/S0378-1119(01)00471-1 |
| Enzyme name: WbwC UniProt ID: Q93NP5* CAZy family: GT2 | Synthesized dimer: bDGalp(1-3)aDGalpN Donor (ID 35273): ?DGalp(1-P-P-5)xXnucU Acceptor (ID 35649): Ac(1-2)aDGalpN(1-P-P-1)[Ph(1-11)]Subst // Subst = undecan-1,11-diol Status: evidence in vitro
Confirmation methods: in vitro (purified protein), mutation (in recombinant protein) ID: 2066 | Organism (ID 16363): Escherichia coli O5 G1675 Full structure (ID 35650): Molecule role (analog of): O-antigen | Wang et al. 2014 DOI: 10.1128/JB.01698-14 |
| Synthesized dimer: bDGalp(1-3)aDGalpN Donor (ID 35273): ?DGalp(1-P-P-5)xXnucU Acceptor (ID 35651): Ac(1-2)aDGalpN(1-P-P-1)Subst // Subst = 11-(anthracen-9-ylmethoxy)undecan-1-diol Status: evidence in vitro
Confirmation methods: in vitro (purified protein) ID: 2067 | Organism (ID 16363): Escherichia coli O5 G1675 Full structure (ID 35652): Molecule role (analog of): O-antigen | ||
| Synthesized dimer: bDGalp(1-3)aDGalpN Donor (ID 35273): ?DGalp(1-P-P-5)xXnucU Acceptor (ID 35651): Ac(1-2)aDGalpN(1-P-P-1)Subst // Subst = 11-(anthracen-9-ylmethoxy)undecan-1-diol Status: evidence in vitro
Confirmation methods: in vitro (crude extract) ID: 2068 | Organism (ID 1566): Escherichia coli O5 Full structure (ID 35652): Molecule role (analog of): O-antigen | Vinnikova et al. 2013 DOI: 10.1016/j.carres.2012.11.009 | |
| Synthesized dimer: bDGalp(1-3)aDGalpN Donor (ID 35273): ?DGalp(1-P-P-5)xXnucU Status: suggested
Confirmation methods: based on the structure found in vivo ID: 2069 Notes: Repeating unit of the O5 antigen. | Organism (ID 1566): Escherichia coli O5 Full structure (ID 2736): CSDB ID(s): 1504, 3191, 10338, 10870, 20637, 26259, 26609, 28672, 29760, 30353, 30559 Molecule role: O-antigen | Wang et al. 2014 DOI: 10.1128/JB.01698-14 Vinnikova et al. 2013 DOI: 10.1016/j.carres.2012.11.009 | |
| Enzyme name: WbwC* UniProt ID: Q93NP5* CAZy family: GT2 | Synthesized dimer: bDGalp(1-3)bDGalpN Status: predicted in silico
Confirmation methods: in silico ID: 2070 | Organism (ID 8179): Escherichia coli O37 Full structure (ID 12288): CSDB ID(s): 1544, 3837, 11591 Molecule role: O-antigen | Shashkov et al. 2016b DOI: 10.1016/j.carres.2016.03.011 |
| Enzyme name: WbnI / WbwI UniProt ID: Q5JBG6* CAZy family: GT6 Gene name: wbnI / wbwI / wcmB | Synthesized dimer: aDGalp(1-3)bDGalp Donor (ID 35273): ?DGalp(1-P-P-5)xXnucU Acceptor (ID 35654): aLFucp(1-2)bDGalp(1-3)[Ac(1-2)]aDGalpN(1-1)Me Status: evidence in vitro
Confirmation methods: in vitro (purified protein) ID: 2071 | Organism (ID 4129): Escherichia coli O86:K62:H2 Full structure (ID 35655): Molecule role (analog of): O-antigen | Yi et al. 2005 DOI: 10.1021/ja045021y |
| Synthesized dimer: aDGalp(1-3)bDGalp Donor (ID 35273): ?DGalp(1-P-P-5)xXnucU Acceptor (ID 35656): -4)aLFucp(1-2)bDGalp(1-3)[Ac(1-2)]aDGalpN(1-3)[Ac(1-2)]bDGalpN(1- Status: indirect evidence in vivo
Confirmation methods: mutation, in silico ID: 2072 | Organism (ID 4129): Escherichia coli O86:K62:H2 Full structure (ID 4253): CSDB ID(s): 1439, 1592, 10035, 10548, 20043, 20120, 20508, 20667, 25273, 30366, 108706, 115586 Molecule role: O-antigen | Yi et al. 2005 DOI: 10.1021/ja045021y Yi et al. 2006b DOI: 10.1016/j.carres.2006.06.009 Feng et al. 2005a DOI: 10.1016/j.vetmic.2004.12.021 | |
| Synthesized dimer: aDGalp(1-3)bDGalp Donor (ID 35273): ?DGalp(1-P-P-5)xXnucU Acceptor (ID 35657): bDGalp(1-3)[Ac(1-2)]aDGalpN(1-1)Me Status: evidence in vitro
Confirmation methods: in vitro (purified protein) ID: 2073 | Organism (ID 4129): Escherichia coli O86:K62:H2 Full structure (ID 35658): Molecule role (analog of): O-antigen | Yi et al. 2005 DOI: 10.1021/ja045021y | |
| Synthesized dimer: aDGalp(1-3)bDGalp Donor (ID 35273): ?DGalp(1-P-P-5)xXnucU Acceptor (ID 35659): aLFucp(1-2)bDGalp(1-1)Me Status: evidence in vitro
Confirmation methods: in vitro (purified protein) ID: 2074 | Organism (ID 4129): Escherichia coli O86:K62:H2 Full structure (ID 35660): Molecule role (analog of): O-antigen | ||
| Synthesized dimer: aDGalp(1-3)bDGalp Donor (ID 35273): ?DGalp(1-P-P-5)xXnucU Acceptor (ID 35661): aLFucp(1-2)bDGalp(1-3)[Ac(1-2)]aDGalpN(1-3)[Ac(1-2)]aDGalpN(1-P-P-1)Subst // Subst = 3,7,11,15,19,23,27,31,35,39,43-undecamethyl-tetratetraconta-2Z,6Z,10Z,14Z,18Z,22Z,26Z,30Z,34E,38E,42-undecaen-1-ol Status: evidence in vitro
Confirmation methods: in vitro (purified protein) ID: 2075 | Organism (ID 2487): Escherichia coli O86 Full structure (ID 35662): Molecule role (analog of): O-antigen | Woodward et al. 2010 DOI: 10.1038/nchembio.351 | |
| Enzyme name: WbnK / WbwK UniProt ID: Q58YV9* CAZy family: GT11 Gene name: wbnK / wbwK / wcmD Gene cluster ID: AY220982 | Synthesized dimer: aLFucp(1-2)bDGalp Donor (ID 35398): ?LFucp(1-P-P-5)xXnucG Acceptor (ID 35657): bDGalp(1-3)[Ac(1-2)]aDGalpN(1-1)Me Status: evidence in vitro
Confirmation methods: in vitro (purified protein) ID: 2076 | Organism (ID 4129): Escherichia coli O86:K62:H2 Full structure (ID 9162): CSDB ID(s): 25807 Molecule role (analog of): O-antigen | Yi et al. 2005 DOI: 10.1021/ja045021y |
| Synthesized dimer: aLFucp(1-2)bDGalp Donor (ID 35398): ?LFucp(1-P-P-5)xXnucG Acceptor (ID 35462): bDGalp(1-1)Me Status: evidence in vitro
Confirmation methods: in vitro (purified protein) ID: 2077 | Organism (ID 4129): Escherichia coli O86:K62:H2 Full structure (ID 3272): CSDB ID(s): 4790, 23039 Molecule role (analog of): O-antigen | ||
| Synthesized dimer: aLFucp(1-2)bDGalp Donor (ID 35398): ?LFucp(1-P-P-5)xXnucG Status: predicted in silico
Confirmation methods: in silico ID: 2078 Notes: Repeating unit of the O86:K62:H2 antigen. | Organism (ID 4129): Escherichia coli O86:K62:H2 Full structure (ID 4253): CSDB ID(s): 1439, 1592, 10035, 10548, 20043, 20120, 20508, 20667, 25273, 30366, 108706, 115586 Molecule role: O-antigen | Yi et al. 2005 DOI: 10.1021/ja045021y Feng et al. 2005a DOI: 10.1016/j.vetmic.2004.12.021 | |
| Synthesized dimer: aLFucp(1-2)bDGalp Donor (ID 35324): bLFucp(1-P-P-5)xXnucG Status: suggested
Confirmation methods: based on the structure found in vivo ID: 2079 Notes: Repeating unit of the O86:K62:B7 antigen. | Organism (ID 7186): Escherichia coli O86:K62:B7 Full structure (ID 4316): CSDB ID(s): 1593, 3637, 3832, 8432, 10715, 10934, 11314, 11375, 20507, 21563, 22686, 30311 Molecule role: O-antigen | Li et al. 2008b DOI: 10.1021/bi801067s | |
| Synthesized dimer: aLFucp(1-2)bDGalp Donor (ID 35324): bLFucp(1-P-P-5)xXnucG Acceptor (ID 35663): bDGalp(1-3)[Ac(1-2)]aDGalpN(1-1)Ph Status: evidence in vitro
Confirmation methods: in vitro (purified protein) ID: 2080 | Organism (ID 7186): Escherichia coli O86:K62:B7 Full structure (ID 35664): Molecule role (analog of): O-antigen | ||
| Synthesized dimer: aLFucp(1-2)bDGalp Donor (ID 35324): bLFucp(1-P-P-5)xXnucG Acceptor (ID 35657): bDGalp(1-3)[Ac(1-2)]aDGalpN(1-1)Me Status: evidence in vitro
Confirmation methods: in vitro (purified protein) ID: 2081 | Organism (ID 7186): Escherichia coli O86:K62:B7 Full structure (ID 9162): CSDB ID(s): 25807 Molecule role (analog of): O-antigen | ||
| Synthesized dimer: aLFucp(1-2)bDGalp Donor (ID 35324): bLFucp(1-P-P-5)xXnucG Acceptor (ID 35665): bDGalp(1-3)[Ac(1-2)]aDGalpN(1-3)[Ac(1-2)]aDGalpN(1-P-P-1)Subst // Subst = 3,7,11,15,19,23,27,31,35,39,43-undecamethyl-tetratetraconta-2Z,6Z,10Z,14Z,18Z,22Z,26Z,30Z,34E,38E,42-undecaen-1-ol Status: evidence in vitro
Confirmation methods: in vitro (purified protein) ID: 2082 | Organism (ID 2487): Escherichia coli O86 Exact full structure is unknown Molecule role (analog of): O-antigen | Woodward et al. 2010 DOI: 10.1038/nchembio.351 | |
| Enzyme name: WbnJ / WbwJ UniProt ID: Q4KXC9* CAZy family: GT2 Gene name: wbnJ / wbwJ / wcmC | Synthesized dimer: bDGalp(1-3)aDGalpN Donor (ID 35273): ?DGalp(1-P-P-5)xXnucU Acceptor (ID 35666): aDGalpN(1-1)Me Status: evidence in vitro
Confirmation methods: in vitro (purified protein) ID: 2083 | Organism (ID 4129): Escherichia coli O86:K62:H2 Full structure (ID 35667): Molecule role (analog of): O-antigen | Yi et al. 2005 DOI: 10.1021/ja045021y |
| Enzyme name: WbnJ / WbwJ Group: WbwJ UniProt ID: Q4KXC9* CAZy family: GT2 Gene name: wbnJ / wbwJ / wcmC Gene cluster ID: AY220982 | Synthesized dimer: bDGalp(1-3)aDGalpN Donor (ID 35273): ?DGalp(1-P-P-5)xXnucU Status: predicted in silico
Confirmation methods: in silico ID: 2084 Notes: Repeating unit of the O86:K62:H2 antigen. | Organism (ID 4129): Escherichia coli O86:K62:H2 Full structure (ID 4253): CSDB ID(s): 1439, 1592, 10548, 20043, 20120, 20508, 20667, 25273, 30366, 108706, 115586 Molecule role: O-antigen | Yi et al. 2005 DOI: 10.1021/ja045021y Feng et al. 2005a DOI: 10.1016/j.vetmic.2004.12.021 |
| Enzyme name: WbnJ / WbwJ UniProt ID: Q4KXC9* CAZy family: GT2 Gene name: wbnJ / wbwJ / wcmC | Synthesized dimer: bDGalp(1-3)aDGalpN Donor (ID 35273): ?DGalp(1-P-P-5)xXnucU Acceptor (ID 35668): Ac(1-2)aDGalpN(1-3)[Ac(1-2)]aDGalpN(1-P-P-1)Subst // Subst = 3,7,11,15,19,23,27,31,35,39,43-undecamethyl-tetratetraconta-2Z,6Z,10Z,14Z,18Z,22Z,26Z,30Z,34E,38E,42-undecaen-1-ol Status: evidence in vitro
Confirmation methods: in vitro (purified protein) ID: 2085 | Organism (ID 2487): Escherichia coli O86 Exact full structure is unknown Molecule role (analog of): O-antigen | Woodward et al. 2010 DOI: 10.1038/nchembio.351 |
| Enzyme name: WbnH UniProt ID: P0DMP6* CAZy family: GT4 Gene name: wbnH / wbwH / wcmA | Synthesized dimer: aDGalpN(1-3)aDGalpN Donor (ID 35669): Ac(1-2)?DGalpN(1-P-P-5)xXnucU Acceptor (ID 35649): Ac(1-2)aDGalpN(1-P-P-1)[Ph(1-11)]Subst // Subst = undecan-1,11-diol Status: evidence in vitro
Confirmation methods: in vitro (purified protein) ID: 2086 | Organism (ID 2515): Escherichia coli O86:H2 Full structure (ID 35670): Molecule role (analog of): O-antigen | Yi et al. 2006a DOI: 10.1016/j.bbrc.2006.03.181 |
| Synthesized dimer: aDGalpN(1-3)aDGalpN Donor (ID 35669): Ac(1-2)?DGalpN(1-P-P-5)xXnucU Acceptor (ID 35671): Ac(1-2)aDGalpN(1-P-P-1)Und Status: evidence in vitro
Confirmation methods: in vitro (purified protein) ID: 2087 | Organism (ID 2515): Escherichia coli O86:H2 Full structure (ID 35672): Molecule role (analog of): O-antigen | ||
| Enzyme name: WbnH Group: WbwH UniProt ID: P0DMP6* CAZy family: GT4 Gene name: wbnH / wbwH / wcmA Gene cluster ID: AY220982 | Synthesized dimer: aDGalpN(1-3)bDGalpN Status: predicted in silico
Confirmation methods: in silico ID: 2088 | Organism (ID 2515): Escherichia coli O86:H2 Full structure (ID 4253): CSDB ID(s): 1439, 1592, 10035, 10548, 20043, 20120, 20508, 20667, 25273, 30366, 108706, 115586 Molecule role: O-antigen | Feng et al. 2005a DOI: 10.1016/j.vetmic.2004.12.021 Yi et al. 2006a DOI: 10.1016/j.bbrc.2006.03.181 |
| Enzyme name: WbnH UniProt ID: P0DMP6* CAZy family: GT4 Gene name: wbnH / wbwH / wcmA | Synthesized dimer: aDGalpN(1-3)aDGalpN Donor (ID 35669): Ac(1-2)?DGalpN(1-P-P-5)xXnucU Acceptor (ID 35673): Ac(1-2)aDGalpN(1-P-P-1)Subst // Subst = 3,7,11,15,19,23,27,31,35,39,43-undecamethyl-tetratetraconta-2Z,6Z,10Z,14Z,18Z,22Z,26Z,30Z,34E,38E,42-undecaen-1-ol Status: evidence in vitro
Confirmation methods: in vitro (purified protein) ID: 2089 | Organism (ID 2487): Escherichia coli O86 Exact full structure is unknown Molecule role (analog of): O-antigen | Woodward et al. 2010 DOI: 10.1038/nchembio.351 |
| Enzyme name: WbiP UniProt ID: Q5J7C7* CAZy family: GT2 | Synthesized dimer: bDGalp(1-3)DGalpN Donor (ID 35273): ?DGalp(1-P-P-5)xXnucU Acceptor (ID 35674): Ac(1-2)?DGalpN Status: evidence in vitro
Confirmation methods: in vitro (purified protein), mutation (in recombinant protein) ID: 2090 | Organism (ID 16364): Escherichia coli O127:K63(B8) Full structure (ID 35675): Molecule role (analog of): O-antigen | Yi et al. 2008 DOI: 10.1021/bi7020712 |
| Synthesized dimer: bDGalp(1-3)bDGalpN Donor (ID 35273): ?DGalp(1-P-P-5)xXnucU Acceptor (ID 35676): Ac(1-2)bDGalpN(1-1)Me Status: evidence in vitro
Confirmation methods: in vitro (purified protein) ID: 2091 Notes: WbiP is significantly more active with alpha-GalNAc than with beta-GalNAc. | Organism (ID 16364): Escherichia coli O127:K63(B8) Full structure (ID 35677): Molecule role (analog of): O-antigen | ||
| Synthesized dimer: bDGalp(1-3)aDGalpN Donor (ID 35273): ?DGalp(1-P-P-5)xXnucU Acceptor (ID 35678): Ac(1-2)aDGalpN(1-1)Me Status: evidence in vitro
Confirmation methods: in vitro (purified protein) ID: 2092 Notes: WbiP is significantly more active with alpha-GalNAc than with beta-GalNAc. | Organism (ID 16364): Escherichia coli O127:K63(B8) Exact full structure is unknown Molecule role (analog of): O-antigen | ||
| Synthesized dimer: bDGalp(1-3)aDGalpN Donor (ID 35273): ?DGalp(1-P-P-5)xXnucU Acceptor (ID 35679): Ac(1-2)aDGalpN(1-1)Ph Status: evidence in vitro
Confirmation methods: in vitro (purified protein) ID: 2093 | Organism (ID 16364): Escherichia coli O127:K63(B8) Exact full structure is unknown Molecule role (analog of): O-antigen | ||
| Synthesized dimer: bDGalp(1-3)aDGalpN Donor (ID 35273): ?DGalp(1-P-P-5)xXnucU Acceptor (ID 35680): Ac(1-2)aDGalpN(1-3)x?Thr Status: evidence in vitro
Confirmation methods: in vitro (purified protein) ID: 2094 | Organism (ID 16364): Escherichia coli O127:K63(B8) Full structure (ID 35681): | ||
| Synthesized dimer: bDGalp(1-3)aDGalpN Donor (ID 35273): ?DGalp(1-P-P-5)xXnucU Acceptor (ID 35682): Ac(1-2)aDGalpN(1-3)x?Ser Status: evidence in vitro
Confirmation methods: in vitro (purified protein) ID: 2095 | Organism (ID 16364): Escherichia coli O127:K63(B8) Full structure (ID 35683): | ||
| Synthesized dimer: bDGalp(1-3)aDGalpN Donor (ID 35273): ?DGalp(1-P-P-5)xXnucU Acceptor (ID 35684): Ac(1-2)aDGalpN(1-3)[Ac(1-2)]aDGalpN(1-P-P-1)Und Status: evidence in vitro
Confirmation methods: in vitro (purified protein) ID: 2096 | Organism (ID 16364): Escherichia coli O127:K63(B8) Full structure (ID 35685): Molecule role (analog of): O-antigen | ||
| Enzyme name: RfaC UniProt ID: P24173 CAZy family: GT9 Gene name: waaC / rfaC Gene GenBank ID: 948136* | Synthesized dimer: aLDmanHepp(1-5)aKdo Donor (ID 35686): bXLDmanHepp(1-P-P-5)xXnucA Acceptor (ID 35687): l?3HOMyr(1-2)[lXLau(1-3)l?3HOMyr(1-2)[aXKdo(2-4)aXKdo(2-6),P-4),lXMyr(1-3)l?3HOMyr(1-3)]bDGlcpN(1-6),l?3HOMyr(1-3)]aDGlcpN(1-P Status: evidence in vitro
Confirmation methods: in vitro (crude extract), in vitro (purified protein), mutation (dual, rfaC + rfaF) ID: 2097 Notes: WaaA, WaaC, WaaF, and WaaQ participate in the synthesis of Ac(1-2)b?GlcpN(1-7)?XLDmanHepp(1-6)??Glcp(1-2)??Glcp(1-3)[??Gal?(1-6)]??Glcp(1-3)[?XLDmanHepp(1-7)]aXLDmanHepp(1-3)aXLDmanHepp(1-5)[<>[%xXEtN(1-7)]aXKdo(2-4)]aXKdo(2-6)[lXLau(1-3)l?3HOMyr(1-2),P-4),lXMyr(1-3)l?3HOMyr(1-3)]bDGlcpN(1-6)[l?3HOMyr(1-3),l?3HOMyr(1-2)]aDGlcpN(1-P. | Organism (ID 21): Escherichia coli K12 Full structure (ID 35688): Molecule role (analog of): core | Gronow et al. 2000 DOI: 10.1046/j.1432-1327.2000.01754.x Brabetz et al. 1997 DOI: 10.1111/j.1432-1033.1997.00716.x Grizon et al. 2006 DOI: 10.1016/j.jmb.2006.07.057 Gronow et al. 2001 DOI: 10.1177/09680519010070040701 Czyzyk et al. 2011 DOI: 10.1021/bi201581b |
| Synthesized dimer: aLDmanHepp(1-5)aKdo Donor (ID 35686): bXLDmanHepp(1-P-P-5)xXnucA Acceptor (ID 35689): l?3HOMyr(1-2)[l?3HOMyr(1-2)[aXKdo(2-4)aXKdo(2-6),P-4),l?3HOMyr(1-3)]bDGlcpN(1-6),l?3HOMyr(1-3)]aDGlcpN(1-P Status: evidence in vitro
Confirmation methods: in vitro (crude extract) ID: 2098 Notes: WaaA, WaaC, WaaF, and WaaQ participate in the synthesis of Ac(1-2)b?GlcpN(1-7)?XLDmanHepp(1-6)??Glcp(1-2)??Glcp(1-3)[??Gal?(1-6)]??Glcp(1-3)[?XLDmanHepp(1-7)]aXLDmanHepp(1-3)aXLDmanHepp(1-5)[<>[%xXEtN(1-7)]aXKdo(2-4)]aXKdo(2-6)[lXLau(1-3)l?3HOMyr(1-2),P-4),lXMyr(1-3)l?3HOMyr(1-3)]bDGlcpN(1-6)[l?3HOMyr(1-3),l?3HOMyr(1-2)]aDGlcpN(1-P. | Organism (ID 21): Escherichia coli K12 Full structure (ID 35690): Molecule role (analog of): core | Gronow et al. 2000 DOI: 10.1046/j.1432-1327.2000.01754.x Gronow et al. 2001 DOI: 10.1177/09680519010070040701 | |
| Enzyme name: RfaC UniProt ID: P24173* CAZy family: GT9 Gene name: waaC / rfaC Gene GenBank ID: 948136* | Synthesized dimer: aLDmanHepp(1-5)aKdo Donor (ID 35686): bXLDmanHepp(1-P-P-5)xXnucA Acceptor (ID 35691): aXKdo(2-4)aXKdo(2-6)[P-4)]bDGlcpN(1-6)aDGlcpN(1-P Status: evidence in vitro
Confirmation methods: in vitro (purified protein) ID: 2099 | Organism (ID 16365): Escherichia coli K12 MB1760 Full structure (ID 35692): | Czyzyk et al. 2011 DOI: 10.1021/bi201581b |
| Synthesized dimer: aDManp(1-5)aKdo Donor (ID 35693): ?DManp(1-P-P-5)xXnucA Acceptor (ID 35689): l?3HOMyr(1-2)[l?3HOMyr(1-2)[aXKdo(2-4)aXKdo(2-6),P-4),l?3HOMyr(1-3)]bDGlcpN(1-6),l?3HOMyr(1-3)]aDGlcpN(1-P Status: evidence in vitro
Confirmation methods: in vitro (purified protein), in vitro (membrane fraction) ID: 2100 | Organism (ID 21): Escherichia coli K12 Full structure (ID 35694): | Kadrmas et al. 1998 DOI: 10.1074/jbc.273.5.2799 Kadrmas et al. 1996 DOI: 10.1074/jbc.271.50.32119 | |
| Enzyme name: RfaF UniProt ID: P37692 CAZy family: GT9 Gene name: waaF / rfaF Gene GenBank ID: 948135* | Synthesized dimer: aLDmanHepp(1-3)aLDmanHepp Donor (ID 35686): bXLDmanHepp(1-P-P-5)xXnucA Acceptor (ID 35695): l?3HOMyr(1-2)[lXLau(1-3)l?3HOMyr(1-2)[aXKdo(2-4)[aXLDmanHepp(1-5)]aXKdo(2-6),P-4),lXMyr(1-3)l?3HOMyr(1-3)]bDGlcpN(1-6),l?3HOMyr(1-3)]aDGlcpN(1-P Status: evidence in vitro
Confirmation methods: in vitro (crude extract), mutation (dual, rfaC + rfaF) ID: 2101 Notes: WaaA, WaaC, WaaF, and WaaQ participate in the synthesis of Ac(1-2)b?GlcpN(1-7)?XLDmanHepp(1-6)??Glcp(1-2)??Glcp(1-3)[??Gal?(1-6)]??Glcp(1-3)[aXLDmanHepp(1-7)]aXLDmanHepp(1-3)aXLDmanHepp(1-5)[<>[%xXEtN(1-7)]aXKdo(2-4)]aXKdo(2-6)[lXLau(1-3)l?3HOMyr(1-2),P-4),lXMyr(1-3)l?3HOMyr(1-3)]bDGlcpN(1-6)[l?3HOMyr(1-3),l?3HOMyr(1-2)]aDGlcpN(1-P. | Organism (ID 21): Escherichia coli K12 Full structure (ID 35696): Molecule role (analog of): core | Gronow et al. 2000 DOI: 10.1046/j.1432-1327.2000.01754.x Brabetz et al. 1997 DOI: 10.1111/j.1432-1033.1997.00716.x Gronow et al. 2001 DOI: 10.1177/09680519010070040701 |
| Synthesized dimer: aLDmanHepp(1-3)aLDmanHepp Donor (ID 35686): bXLDmanHepp(1-P-P-5)xXnucA Acceptor (ID 35697): l?3HOMyr(1-2)[l?3HOMyr(1-2)[aXKdo(2-4)[aXLDmanHepp(1-5)]aXKdo(2-6),P-4),l?3HOMyr(1-3)]bDGlcpN(1-6),l?3HOMyr(1-3)]aDGlcpN(1-P Status: evidence in vitro
Confirmation methods: in vitro (crude extract) ID: 2102 Notes: WaaA, WaaC, WaaF, and WaaQ participate in the synthesis of Ac(1-2)b?GlcpN(1-7)?XLDmanHepp(1-6)??Glcp(1-2)??Glcp(1-3)[??Gal?(1-6)]??Glcp(1-3)[aXLDmanHepp(1-7)]aXLDmanHepp(1-3)aXLDmanHepp(1-5)[<>[%xXEtN(1-7)]aXKdo(2-4)]aXKdo(2-6)[lXLau(1-3)l?3HOMyr(1-2),P-4),lXMyr(1-3)l?3HOMyr(1-3)]bDGlcpN(1-6)[l?3HOMyr(1-3),l?3HOMyr(1-2)]aDGlcpN(1-P. | Organism (ID 21): Escherichia coli K12 Full structure (ID 35698): Molecule role (analog of): core | Gronow et al. 2000 DOI: 10.1046/j.1432-1327.2000.01754.x Gronow et al. 2001 DOI: 10.1177/09680519010070040701 | |
| Enzyme name: WaaA UniProt ID: P0AC75 Gene name: waaA / kdtA Gene GenBank ID: 949048* | Synthesized dimer: aKdo(2-6)bDGlcpN Donor (ID 35699): ?XKdo(2-P-5)xXnucC Acceptor (ID 35700): l?3HOMyr(1-2)[lXLau(1-3)l?3HOMyr(1-2)[P-4),lXMyr(1-3)l?3HOMyr(1-3)]bDGlcpN(1-6),l?3HOMyr(1-3)]aDGlcpN(1-P Status: evidence in vitro
Confirmation methods: in vitro (crude extract) ID: 2103 Notes: WaaA, WaaC, WaaF, and WaaQ participate in the synthesis of Ac(1-2)b?GlcpN(1-7)?XLDmanHepp(1-6)??Glcp(1-2)??Glcp(1-3)[??Gal?(1-6)]??Glcp(1-3)[aXLDmanHepp(1-7)]aXLDmanHepp(1-3)aXLDmanHepp(1-5)[<>[%xXEtN(1-7)]aXKdo(2-4)]aXKdo(2-6)[lXLau(1-3)l?3HOMyr(1-2),P-4),lXMyr(1-3)l?3HOMyr(1-3)]bDGlcpN(1-6)[l?3HOMyr(1-3),l?3HOMyr(1-2)]aDGlcpN(1-P. | Organism (ID 21): Escherichia coli K12 Full structure (ID 35701): Molecule role (analog of): core | |
| Synthesized dimer: aKdo(2-4)aKdo Donor (ID 35699): ?XKdo(2-P-5)xXnucC Acceptor (ID 35702): l?3HOMyr(1-2)[lXLau(1-3)l?3HOMyr(1-2)[aXKdo(2-6),P-4),lXMyr(1-3)l?3HOMyr(1-3)]bDGlcpN(1-6),l?3HOMyr(1-3)]aDGlcpN(1-P Status: evidence in vitro
Confirmation methods: in vitro (crude extract) ID: 2104 Notes: WaaA, WaaC, WaaF, and WaaQ participate in the synthesis of Ac(1-2)b?GlcpN(1-7)?XLDmanHepp(1-6)??Glcp(1-2)??Glcp(1-3)[??Gal?(1-6)]??Glcp(1-3)[aXLDmanHepp(1-7)]aXLDmanHepp(1-3)aXLDmanHepp(1-5)[<>[%xXEtN(1-7)]aXKdo(2-4)]aXKdo(2-6)[lXLau(1-3)l?3HOMyr(1-2),P-4),lXMyr(1-3)l?3HOMyr(1-3)]bDGlcpN(1-6)[l?3HOMyr(1-3),l?3HOMyr(1-2)]aDGlcpN(1-P. | Organism (ID 21): Escherichia coli K12 Exact full structure is unknown Molecule role (analog of): core | ||
| Synthesized dimer: aKdo(2-6)bDGlcpN Donor (ID 35699): ?XKdo(2-P-5)xXnucC Acceptor (ID 35703): l?3HOMyr(1-2)[l?3HOMyr(1-2)[P-4),l?3HOMyr(1-3)]bDGlcpN(1-6),l?3HOMyr(1-3)]aDGlcpN(1-P Status: evidence in vitro
Confirmation methods: in vitro (crude extract, partially purified protein) ID: 2105 Notes: WaaA, WaaC, WaaF, and WaaQ participate in the synthesis of Ac(1-2)b?GlcpN(1-7)?XLDmanHepp(1-6)??Glcp(1-2)??Glcp(1-3)[??Gal?(1-6)]??Glcp(1-3)[aXLDmanHepp(1-7)]aXLDmanHepp(1-3)aXLDmanHepp(1-5)[<>[%xXEtN(1-7)]aXKdo(2-4)]aXKdo(2-6)[lXLau(1-3)l?3HOMyr(1-2),P-4),lXMyr(1-3)l?3HOMyr(1-3)]bDGlcpN(1-6)[l?3HOMyr(1-3),l?3HOMyr(1-2)]aDGlcpN(1-P. | Organism (ID 21): Escherichia coli K12 Full structure (ID 35704): Molecule role (analog of): core | Gronow et al. 2000 DOI: 10.1046/j.1432-1327.2000.01754.x Gronow et al. 2001 DOI: 10.1177/09680519010070040701 Belunius et al. 1992 | |
| Synthesized dimer: aKdo(2-4)aKdo Donor (ID 35699): ?XKdo(2-P-5)xXnucC Acceptor (ID 35705): l?3HOMyr(1-2)[l?3HOMyr(1-2)[aXKdo(2-6),P-4),l?3HOMyr(1-3)]bDGlcpN(1-6),l?3HOMyr(1-3)]aDGlcpN(1-P Status: evidence in vitro
Confirmation methods: in vitro (crude extract, partially purified protein) ID: 2106 Notes: WaaA, WaaC, WaaF, and WaaQ participate in the synthesis of Ac(1-2)b?GlcpN(1-7)?XLDmanHepp(1-6)??Glcp(1-2)??Glcp(1-3)[??Gal?(1-6)]??Glcp(1-3)[aXLDmanHepp(1-7)]aXLDmanHepp(1-3)aXLDmanHepp(1-5)[<>[%xXEtN(1-7)]aXKdo(2-4)]aXKdo(2-6)[lXLau(1-3)l?3HOMyr(1-2),P-4),lXMyr(1-3)l?3HOMyr(1-3)]bDGlcpN(1-6)[l?3HOMyr(1-3),l?3HOMyr(1-2)]aDGlcpN(1-P. | Organism (ID 21): Escherichia coli K12 Exact full structure is unknown Molecule role (analog of): core | ||
| Enzyme name: WaaB UniProt ID: P27127 CAZy family: GT4 Gene name: waaB / rfaB Gene GenBank ID: 948144* | Synthesized dimer: DGalp(1-6)DGlcp Status: indirect evidence in vivo
Confirmation methods: mutation (deletion) ID: 2107 Notes: WaaB participates in the synthesis of glycoform I of the LPS core. | Organism (ID 21): Escherichia coli K12 Full structure (ID 35706): Molecule role: core | Klein et al. 2011 DOI: 10.1074/jbc.M111.291799 |
| Synthesized dimer: DGalp(1-6)DGlcp Status: indirect evidence in vivo
Confirmation methods: mutation (deletion) ID: 2108 Notes: WaaB participates in the synthesis of glycoform IV of the LPS core. | Organism (ID 21): Escherichia coli K12 Full structure (ID 35707): Molecule role: core | ||
| Synthesized dimer: DGalp(1-6)DGlcp Status: indirect evidence in vivo
Confirmation methods: mutation (deletion) ID: 2109 Notes: WaaB participates in the synthesis of glycoform V of the LPS core. | Organism (ID 21): Escherichia coli K12 Full structure (ID 35708): Molecule role: core | ||
| Enzyme name: WaaK UniProt ID: P27242* CAZy family: GT9 Gene name: waaK / rfaK / waaU Gene GenBank ID: 948147* | Synthesized dimer: aDGlcpN(1-2)DGlcp Donor (ID 35226): Ac(1-2)?DGlcpN(1-P-P-5)xXnucU Status: direct evidence in vivo
Confirmation methods: mutation (insertion), complementation, in vitro (crude extract) ID: 2110 | Organism (ID 16366): Escherichia coli R2 F632 Full structure (ID 35709): Molecule role: core | Heinrich et al. 1998a DOI: 10.1074/jbc.273.15.8849 |
| Enzyme name: WaaL UniProt ID: P27243* Gene name: waaL / rfaL Gene GenBank ID: 948148* | Synthesized dimer: Subst1(1-?)DGlcp // Subst1 = O-polysaccharide; Subst2 = lipid A Status: indirect evidence in vivo
Confirmation methods: mutation (insertion) ID: 2111 Notes: WaaK is required for the ligation of D-galactan I O-PS to lipid A-core. | Organism (ID 16366): Escherichia coli R2 F632 Full structure (ID 35709): Molecule role: O-antigen,core | |
| Enzyme name: WaaL UniProt ID: P27243 Gene name: waaL / rfaL Gene GenBank ID: 948148* | Synthesized dimer: Subst1(1-?)Subst3 // Subst1 = O7 antigen; Subst3 = lipid A-core Donor (ID 35710): Subst1(1-P-P-1)Subst2 // Subst1 = O7 antigen; Subst2 = undecaprenol Acceptor (ID 35711): Subst3 // Subst3 = lipid A-core Status: evidence in vitro
Confirmation methods: in vitro (purified protein), mutation (in recombinant protein) ID: 2112 Notes: WaaL catalyzed the in vitro transfer of O7 antigen from Und-PP-O7 to the E. coli K-12 lipid A-core OS. | Organism (ID 21): Escherichia coli K12 Full structure (ID 35712): Molecule role: O-antigen,core | Ruan et al. 2012 DOI: 10.1093/glycob/cwr150 |
| Synthesized dimer: bDGlcp(1-7)aLDmanHepp Status: indirect evidence in vivo
Confirmation methods: mutation (deletion) ID: 2113 Notes: WaaL is necessary for the ligation of colanic acid to the LPS core. | Organism (ID 16357): Escherichia coli K12 MG1655 Full structure (ID 35713): Molecule role: O-antigen,core | Meredith et al. 2007 DOI: 10.1074/jbc.M611034200 | |
| Enzyme name: WaaL UniProt ID: P27243* Gene name: waaL / rfaL Gene GenBank ID: 948148* | Synthesized dimer: Subst1(1-3)bDGlcp // Subst1 = O-polysaccharide; Subst2 = lipid A Status: indirect evidence in vivo
Confirmation methods: mutation (insertion) ID: 2114 Notes: WaaL is necessary for the ligation of O-antigen to the LPS core. | Organism (ID 9186): Escherichia coli R1 F470 Full structure (ID 35714): Molecule role: O-antigen,core | Heinrich et al. 1998b DOI: 10.1074/jbc.273.45.29497 |
| Enzyme name: WaaG UniProt ID: Q9R2L8* CAZy family: GT4 | Synthesized dimer: aDGlcp(1-3)aLDmanHepp Donor (ID 34839): ?DGlcp(1-P-P-5)xXnucU Status: indirect evidence in vivo
Confirmation methods: mutation (insertion), complementation ID: 2115 | Organism (ID 9186): Escherichia coli R1 F470 Full structure (ID 35715): Molecule role: O-antigen,core | Heinrich et al. 1998b DOI: 10.1074/jbc.273.45.29497 Yethon et al. 2000 DOI: 10.1128/JB.182.19.5620-5623.2000 |
| Synthesized dimer: aDGlcp(1-3)aLDmanHepp Donor (ID 34839): ?DGlcp(1-P-P-5)xXnucU Status: predicted in silico
Confirmation methods: in silico ID: 2116 | Organism (ID 16367): Escherichia coli R4 F2513 Full structure (ID 35716): Molecule role: core | Heinrich et al. 1998b DOI: 10.1074/jbc.273.45.29497 | |
| Enzyme name: WaaO UniProt ID: Q9R9D1* CAZy family: GT8 Gene name: waaO / rfaI Gene GenBank ID: 948143* | Synthesized dimer: aDGlcp(1-3)aDGlcp Donor (ID 34839): ?DGlcp(1-P-P-5)xXnucU Status: indirect evidence in vivo
Confirmation methods: mutation (insertion), complementation ID: 2117 | Organism (ID 9186): Escherichia coli R1 F470 Full structure (ID 35715): Molecule role: core | |
| Synthesized dimer: aDGlcp(1-3)aDGlcp Donor (ID 34839): ?DGlcp(1-P-P-5)xXnucU Status: predicted in silico
Confirmation methods: in silico ID: 2118 | Organism (ID 16367): Escherichia coli R4 F2513 Full structure (ID 35716): Molecule role: core | ||
| Synthesized dimer: DGlcp(1-3)DGlcp Status: indirect evidence in vivo
Confirmation methods: mutation (deletion) ID: 2119 Notes: WaaO participates in the synthesis of glycoform I of the LPS core. | Organism (ID 21): Escherichia coli K12 Full structure (ID 35706): Molecule role: core | Klein et al. 2011 DOI: 10.1074/jbc.M111.291799 | |
| Synthesized dimer: DGlcp(1-3)DGlcp Status: indirect evidence in vivo
Confirmation methods: mutation (deletion) ID: 2120 Notes: WaaO participates in the synthesis of glycoform IV of the LPS core. | Organism (ID 21): Escherichia coli K12 Full structure (ID 35707): Molecule role: core | ||
| Synthesized dimer: DGlcp(1-3)DGlcp Status: indirect evidence in vivo
Confirmation methods: mutation (deletion) ID: 2121 Notes: WaaO participates in the synthesis of glycoform V of the LPS core. | Organism (ID 21): Escherichia coli K12 Full structure (ID 35708): Molecule role: core | ||
| Synthesized dimer: aDGlcp(1-3)aDGlcp Status: indirect evidence in vivo
Confirmation methods: mutation (deletion), complementation ID: 2122 | Organism (ID 21): Escherichia coli K12 Full structure (ID 35717): Molecule role: outer core | Shibayama et al. 1998 | |
| Enzyme name: WaaR/WaaJ UniProt ID: O68204* CAZy family: GT8 Gene name: waaR / waaJ / rfaJ Gene GenBank ID: 948142* | Synthesized dimer: DGlcp(1-2)DGlcp Status: indirect evidence in vivo
Confirmation methods: mutation (deletion) ID: 2123 Notes: WaaR participates in the synthesis of glycoform I of the LPS core; its deletion led to preferential accumulation of glycoforms IV and V. | Organism (ID 21): Escherichia coli K12 Full structure (ID 35706): Molecule role: core | Klein et al. 2011 DOI: 10.1074/jbc.M111.291799 |
| Synthesized dimer: aDGlcp(1-2)aDGlcp Status: indirect evidence in vivo
Confirmation methods: mutation (deletion), mutation, complementation ID: 2124 | Organism (ID 21): Escherichia coli K12 Full structure (ID 35717): Molecule role: outer core | Shibayama et al. 1999 DOI: 10.1016/S0378-1097(99)00127-5 | |
| Synthesized dimer: aDGlcp(1-2)aDGalp Acceptor (ID 35718): aDGalp(1-3)aDGlcp(1-3)Subst // Subst = inner core Status: evidence in vitro
Confirmation methods: overexpression in a non-native R3 background ID: 2125 Notes: WaaR was able to extend the LPS acceptor from CWG350 (which bears an insertional muration in waaJ) to generate a product that comigrated with the wild-type LPS, despite the fact that the native acceptor residue for WaaR is a 1,3-linked Glc, rather than the 1,3-linked Gal provided by CWG350 LPS. | Organism (ID 16368): Escherichia coli R3 F653 Full structure (ID 35719): Molecule role (analog of): outer core | Leipold et al. 2007b DOI: 10.1074/jbc.M704131200 | |
| Enzyme name: WaaR/WaaJ UniProt ID: Q8XDC2 CAZy family: GT8 Gene name: waaR / waaJ / rfaJ Gene GenBank ID: 948142* | Synthesized dimer: aDGlcpN(1-7)aLDmanHepp Donor (ID 35720): Ac(1-2)?DGlcp(1-P-P-5)xXnucU Status: direct evidence in vivo
Confirmation methods: in vitro (crude extract), mutation, complementation ID: 2126 Notes: Endogenous substrate was used. Protein annotation is ambiguous (Uniprot lacks such a protein for E.coli). The enzyme is plasmid-encoded. | Organism (ID 18): Escherichia coli O157:H7 Full structure (ID 35721): Molecule role: inner core | Kaniuk et al. 2004 DOI: 10.1074/jbc.M401879200 |
| Enzyme name: WaaR/WaaJ UniProt ID: O68204* CAZy family: GT8 Gene name: waaR / waaJ / rfaJ Gene GenBank ID: 948142* | Synthesized dimer: aDGlcp(1-2)aDGalp Donor (ID 34839): ?DGlcp(1-P-P-5)xXnucU Acceptor (ID 35718): aDGalp(1-3)aDGlcp(1-3)Subst // Subst = inner core Status: direct evidence in vivo
Confirmation methods: mutation (insertion), complementation, in vitro (purified protein), mutation (in recombinant protein) ID: 2127 Notes: LPS isolated from E. coli CWG350, which bears an insertional mutation in waaJ, was used as acceptor. | Organism (ID 16368): Escherichia coli R3 F653 Full structure (ID 35722): Molecule role: outer core | Leipold et al. 2007b DOI: 10.1074/jbc.M704131200 Leipold et al. 2007a DOI: 10.1074/jbc.M608164200 |
| Enzyme name: WaaT UniProt ID: Q9R9D2* CAZy family: GT8 | Synthesized dimer: aDGalp(1-2)aDGlcp Donor (ID 35273): ?DGalp(1-P-P-5)xXnucU Status: indirect evidence in vivo
Confirmation methods: mutation (insertion), complementation ID: 2128 | Organism (ID 9186): Escherichia coli R1 F470 Full structure (ID 35715): Molecule role: core | Heinrich et al. 1998b DOI: 10.1074/jbc.273.45.29497 |
| Synthesized dimer: aDGalp(1-2)aDGlcp Donor (ID 35273): ?DGalp(1-P-P-5)xXnucU Acceptor (ID 35723): aDGlcp(1-3)aDGlcp(1-3)Subst // Subst = inner core Status: direct evidence in vivo
Confirmation methods: mutation (insertion), complementation, in vitro (purified protein) ID: 2129 Notes: LPS isolated from E. coli CWG309, which bears an insertional mutation in waaT, was used as acceptor. | Organism (ID 9186): Escherichia coli R1 F470 Full structure (ID 35724): Molecule role: outer core | Leipold et al. 2007b DOI: 10.1074/jbc.M704131200 | |
| Synthesized dimer: aDGalp(1-2)aDGlcp Donor (ID 35273): ?DGalp(1-P-P-5)xXnucU Status: predicted in silico
Confirmation methods: in silico ID: 2130 | Organism (ID 16367): Escherichia coli R4 F2513 Full structure (ID 35716): Molecule role: core | Heinrich et al. 1998b DOI: 10.1074/jbc.273.45.29497 | |
| Enzyme name: WaaV UniProt ID: J7QII7* | Synthesized dimer: bDGlcp(1-3)aDGlcp Donor (ID 34839): ?DGlcp(1-P-P-5)xXnucU Status: indirect evidence in vivo
Confirmation methods: mutation (insertion), complementation ID: 2131 | Organism (ID 9186): Escherichia coli R1 F470 Full structure (ID 35715): Molecule role: core | |
| Enzyme name: WaaW UniProt ID: J7R7M2* | Synthesized dimer: aDGalp(1-2)aDGalp Donor (ID 35273): ?DGalp(1-P-P-5)xXnucU Status: indirect evidence in vivo
Confirmation methods: mutation (insertion), complementation ID: 2132 | Organism (ID 9186): Escherichia coli R1 F470 Full structure (ID 35715): Molecule role: core | |
| Synthesized dimer: aDGalp(1-2)aDGalp Donor (ID 35273): ?DGalp(1-P-P-5)xXnucU Status: predicted in silico
Confirmation methods: in silico ID: 2133 | Organism (ID 16367): Escherichia coli R4 F2513 Full structure (ID 35716): Molecule role: core | ||
| Enzyme name: WaaX UniProt ID: Q9ZIS2* CAZy family: GT25 | Synthesized dimer: bDGalp(1-4)aDGlcp Donor (ID 35273): ?DGalp(1-P-P-5)xXnucU Status: indirect evidence in vivo
Confirmation methods: overexpression ID: 2134 | Organism (ID 16367): Escherichia coli R4 F2513 Full structure (ID 35716): Molecule role: core | |
| Enzyme name: WaaS UniProt ID: O68207* CAZy family: GT8 Gene name: waaS / rfaS Gene GenBank ID: 948151* | Synthesized dimer: Rhap(1-5)aKdop Status: indirect evidence in vivo
Confirmation methods: mutation (deletion), overexpression ID: 2135 Notes: WaaS participates in the synthesis of glycoform IV of the LPS core. | Organism (ID 21): Escherichia coli K12 Full structure (ID 35707): Molecule role: core | Klein et al. 2011 DOI: 10.1074/jbc.M111.291799 |
| Synthesized dimer: Rhap(1-5)aKdop Status: indirect evidence in vivo
Confirmation methods: mutation (deletion), overexpression ID: 2136 Notes: WaaS participates in the synthesis of glycoform V of the LPS core. | Organism (ID 21): Escherichia coli K12 Full structure (ID 35708): Molecule role: core | ||
| Enzyme name: WaaZ UniProt ID: P27241* CAZy family: GT73 Gene name: waaZ / rfaZ Gene GenBank ID: 948146* | Synthesized dimer: aKdop(2-4)aKdop Status: indirect evidence in vivo
Confirmation methods: mutation (deletion), complementation, overexpression ID: 2137 Notes: WaaZ participates in the synthesis of glycoform IV of the LPS core. | Organism (ID 21): Escherichia coli K12 Full structure (ID 35707): Molecule role: core | |
| Synthesized dimer: aKdop(2-4)aKdop Status: indirect evidence in vivo
Confirmation methods: mutation (deletion), complementation, overexpression ID: 2138 Notes: WaaZ participates in the synthesis of glycoform V of the LPS core. | Organism (ID 21): Escherichia coli K12 Full structure (ID 35708): Molecule role: core | ||
| Enzyme name: RfaQ UniProt ID: P25742 CAZy family: GT9 Gene name: waaQ / rfaQ Gene GenBank ID: 948155* | Synthesized dimer: aLDmanHepp(1-7)aLDmanHepp Donor (ID 35686): bXLDmanHepp(1-P-P-5)xXnucA Acceptor (ID 35725): lXPam(1-3)l?3HOMyr(1-2)[lXLau(1-3)l?3HOMyr(1-2)[aXKdo(2-4)[aXLDmanHepp(1-3)[P-4)]aXLDmanHepp(1-5)]aXKdo(2-6),P-4),lXMyr(1-3)l?3HOMyr(1-3)]bDGlcpN(1-6),l?3HOMyr(1-3)]bDGlcpN(1-P Status: evidence in vitro
Confirmation methods: in vitro (purified protein) ID: 2139 Notes: WaaA, WaaC, WaaF, and WaaQ participate in the synthesis of Ac(1-2)b?GlcpN(1-7)?XLDmanHepp(1-6)??Glcp(1-2)??Glcp(1-3)[??Gal?(1-6)]??Glcp(1-3)[aXLDmanHepp(1-7)]aXLDmanHepp(1-3)aXLDmanHepp(1-5)[<>[%xXEtN(1-7)]aXKdo(2-4)]aXKdo(2-6)[lXLau(1-3)l?3HOMyr(1-2),P-4),lXMyr(1-3)l?3HOMyr(1-3)]bDGlcpN(1-6)[l?3HOMyr(1-3),l?3HOMyr(1-2)]aDGlcpN(1-P. | Organism (ID 21): Escherichia coli K12 Full structure (ID 35726): Molecule role (analog of): core | Mudapaka et al. 2015 DOI: 10.1016/j.febslet.2015.04.051 |
| Synthesized dimer: aLDmanHepp(1-7)aLDmanHepp Donor (ID 35686): bXLDmanHepp(1-P-P-5)xXnucA Acceptor (ID 35727): l?3HOMyr(1-2)[l?3HOMyr(1-2)[aXKdo(2-4)[aXLDmanHepp(1-3)[P-4)]aXLDmanHepp(1-5)]aXKdo(2-6),P-4)]bDGlcpN(1-6)]bDGlcpN(1-P Status: evidence in vitro
Confirmation methods: in vitro (purified protein) ID: 2140 Notes: WaaA, WaaC, WaaF, and WaaQ participate in the synthesis of Ac(1-2)b?GlcpN(1-7)?XLDmanHepp(1-6)??Glcp(1-2)??Glcp(1-3)[??Gal?(1-6)]??Glcp(1-3)[?XLDmanHepp(1-7)]aXLDmanHepp(1-3)aXLDmanHepp(1-5)[<>[%xXEtN(1-7)]aXKdo(2-4)]aXKdo(2-6)[lXLau(1-3)l?3HOMyr(1-2),P-4),lXMyr(1-3)l?3HOMyr(1-3)]bDGlcpN(1-6)[l?3HOMyr(1-3),l?3HOMyr(1-2)]aDGlcpN(1-P. | Organism (ID 21): Escherichia coli K12 Full structure (ID 35728): Molecule role (analog of): core | ||
| Synthesized dimer: aLDmanHepp(1-7)aLDmanHepp Donor (ID 35686): bXLDmanHepp(1-P-P-5)xXnucA Acceptor (ID 35729): aXKdo(2-4)[aXLDmanHepp(1-3)[P-4)]aXLDmanHepp(1-5)]aXKdo(2-6)[P-4)]bDGlcpN(1-6)bDGlcpN(1-P Status: evidence in vitro
Confirmation methods: in vitro (purified protein) ID: 2141 Notes: WaaA, WaaC, WaaF, and WaaQ participate in the synthesis of Ac(1-2)b?GlcpN(1-7)?XLDmanHepp(1-6)??Glcp(1-2)??Glcp(1-3)[??Gal?(1-6)]??Glcp(1-3)[aXLDmanHepp(1-7)]aXLDmanHepp(1-3)aXLDmanHepp(1-5)[<>[%xXEtN(1-7)]aXKdo(2-4)]aXKdo(2-6)[lXLau(1-3)l?3HOMyr(1-2),P-4),lXMyr(1-3)l?3HOMyr(1-3)]bDGlcpN(1-6)[l?3HOMyr(1-3),l?3HOMyr(1-2)]aDGlcpN(1-P. | Organism (ID 21): Escherichia coli K12 Full structure (ID 35730): Molecule role (analog of): core | ||
| Synthesized dimer: aLDmanHepp(1-7)aLDmanHepp Status: indirect evidence in vivo
Confirmation methods: mutation (deletion) ID: 2142 Notes: RfaQ participates in the synthesis of glycoform I of the LPS. | Organism (ID 21): Escherichia coli K12 Full structure (ID 35706): Molecule role: core | Klein et al. 2013 DOI: 10.1074/jbc.M112.445981 | |
| Synthesized dimer: aLDmanHepp(1-7)aLDmanHepp Status: indirect evidence in vivo
Confirmation methods: mutation (deletion) ID: 2143 Notes: RfaQ participates in the synthesis of glycoform V of the LPS. | Organism (ID 21): Escherichia coli K12 Full structure (ID 35731): Molecule role: core | ||
| Synthesized dimer: aLDmanHepp(1-7)aLDmanHepp Status: indirect evidence in vivo
Confirmation methods: mutation (deletion) ID: 2144 Notes: RfaQ participates in the synthesis of glycoform VI of the LPS. | Organism (ID 21): Escherichia coli K12 Full structure (ID 35732): Molecule role: core | ||
| Synthesized dimer: aLDmanHepp(1-7)aLDmanHepp Status: indirect evidence in vivo
Confirmation methods: mutation (deletion) ID: 2145 Notes: RfaQ participates in the synthesis of glycoform VII of the LPS. | Organism (ID 21): Escherichia coli K12 Full structure (ID 35733): Molecule role: core | ||
| Enzyme name: WaaY UniProt ID: P27240 Gene name: waaY / rfaY Gene GenBank ID: 948145* | Synthesized dimer: P(?-4)aLDmanHepp Status: indirect evidence in vivo
Confirmation methods: mutation (deletion) ID: 2146 Notes: WaaY phosphorylates glycoform I of the LPS. | Organism (ID 21): Escherichia coli K12 Full structure (ID 35706): Molecule role: core | |
| Enzyme name: WaaH / YibD UniProt ID: A0A0E1M397* Gene name: waaH / yibD Gene GenBank ID: 948140* | Synthesized dimer: DGlcpA(1-7)aLDmanHepp Status: indirect evidence in vivo
Confirmation methods: mutation (deletion) ID: 2147 Notes: WaaH participates in the synthesis of glycoform VI of the LPS. WaaH participates in E. coli O157:H7 biofilm formation during inorganic phosphate starvation. | Organism (ID 21): Escherichia coli K12 Full structure (ID 35732): Molecule role: core | Klein et al. 2013 DOI: 10.1074/jbc.M112.445981 Vogeleer et al. 2019 DOI: 10.1128/JB.00093-19 |
| Synthesized dimer: DGlcpA(1-7)aLDmanHepp Status: indirect evidence in vivo
Confirmation methods: mutation (deletion) ID: 2148 Notes: WaaH participates in the synthesis of glycoform VII of the LPS. WaaH participates in E. coli O157:H7 biofilm formation during inorganic phosphate starvation. | Organism (ID 21): Escherichia coli K12 Full structure (ID 35733): Molecule role: core | ||
| Enzyme name: WaaD UniProt ID: Q8XDC3 CAZy family: GT4 | Synthesized dimer: aDGlcp(1-2)aDGlcp Donor (ID 34839): ?DGlcp(1-P-P-5)xXnucU Status: direct evidence in vivo
Confirmation methods: in vitro (purified protein), mutation, complementation ID: 2149 Notes: Endogenous substrate was used. | Organism (ID 18): Escherichia coli O157:H7 Full structure (ID 35721): Molecule role: outer core | Kaniuk et al. 2004 DOI: 10.1074/jbc.M401879200 |
| Synthesized dimer: aDGlcp(1-2)aDGalp Donor (ID 34839): ?DGlcp(1-P-P-5)xXnucU Status: direct evidence in vivo
Confirmation methods: in vitro (crude extract), mutation, complementation ID: 2150 Notes: Endogenous substrate was used. | Organism (ID 18): Escherichia coli O157:H7 Full structure (ID 35721): Molecule role: outer core | ||
| Enzyme name: WbbL UniProt ID: P36667* CAZy family: GT2 | Synthesized dimer: aLRhap(1-3)aDGlcpN Donor (ID 35153): ?LRhap(1-P-P-5)xXnucdT Status: indirect evidence in vivo
Confirmation methods: overexpression ID: 2151 Notes: Repeating unit of the O16 antigen. | Organism (ID 16369): Escherichia coli K12 O16 Full structure (ID 272): CSDB ID(s): 1517, 2061, 10218, 11636, 12607, 20109, 22422, 30068, 30969 Molecule role: O-antigen | Stevenson et al. 1994 |
| Synthesized dimer: aLRhap(1-3)aDGlcpN Donor (ID 35153): ?LRhap(1-P-P-5)xXnucdT Acceptor (ID 35643): Ac(1-2)aDGlcpN(1-P-P-1)Subst // Subst = undecaprenol Status: evidence in vitro
Confirmation methods: in vitro (crude extract), overexpression ID: 2152 | Organism (ID 16369): Escherichia coli K12 O16 Full structure (ID 35734): Molecule role (analog of, precursor of): O-antigen | ||
| Enzyme name: WecA UniProt ID: P0AC78* Gene name: wecA / rfe Gene GenBank ID: 948789* | Synthesized dimer: P(?-?)P Donor (ID 35720): Ac(1-2)?DGlcp(1-P-P-5)xXnucU Acceptor (ID 35735): P-1)Subst // Subst = undecaprenol Status: evidence in vitro
Confirmation methods: in vitro (crude extract), overexpression ID: 2153 Notes: This enzyme initiates synthesis of the repeating unit of the common enterobacterial antigen. Phosphodiester bond is synthesized. | Organism (ID 16369): Escherichia coli K12 O16 Exact full structure is unknown Molecule role (analog of, precursor of): O-antigen | Stevenson et al. 1994 Patel et al. 2012 DOI: 10.1128/JB.06052-11 |
| Enzyme name: WclY / WbeC UniProt ID: A6M9B7* CAZy family: GT4 | Synthesized dimer: aDGlcpN(1-4)bDGalp Status: indirect evidence in vivo
Confirmation methods: mutation, complementation, in silico ID: 2154 Notes: Repeating unit of the O107 antigen. Another Uniprot ID = B8QSK0* (WclY and WbeC are synonims). | Organism (ID 6228): Escherichia coli O107 H705 Full structure (ID 14742): CSDB ID(s): 1846, 5056, 23872, 27352 Molecule role: O-antigen | Wang et al. 2012a DOI: 10.1093/glycob/cwr137 Kocev et al. 2020 DOI: 10.1093/glycob/cwaa045 |
| Synthesized dimer: aDGlcp(1-4)bDGalp Status: indirect evidence in vivo
Confirmation methods: mutation, complementation, in silico ID: 2155 Notes: Repeating unit of the O117 antigen. Another Uniprot ID = B8QSK0* (WclY and WbeC are synonims). | Organism (ID 6229): Escherichia coli O117 W30 Full structure (ID 2704): CSDB ID(s): 1857, 3145, 20704, 21517, 24256, 28683, 32135 Molecule role: O-antigen | ||
| Synthesized dimer: aDGlcp(1-4)bDGalp Donor (ID 34839): ?DGlcp(1-P-P-5)xXnucU Acceptor (ID 35736): bDGalp(1-3)[Ac(1-2)]aDGalpN(1-P-P-1)[Ph(1-11)]Subst // Subst = undecan-1,11-diol Status: evidence in vitro
Confirmation methods: in vitro (purified protein), in vitro (membrane preparation), in vitro (mutation) ID: 2156 Notes: UDP-[3H]Glc, UDP-[3H]Gal, UDP-[3H]GlcNAc and UDP-[3H]GalNAc were all donor substrates for WclY(O117), with 100%, 11%, 7% and 7% activity, respectively. | Organism (ID 4054): Escherichia coli O117 Full structure (ID 35737): | Kocev et al. 2020 DOI: 10.1093/glycob/cwaa045 | |
| Synthesized dimer: aDGlcp(1-4)bDGalp Donor (ID 35738): ?DGlcp(1-P-P-5)xXnucA Acceptor (ID 35736): bDGalp(1-3)[Ac(1-2)]aDGalpN(1-P-P-1)[Ph(1-11)]Subst // Subst = undecan-1,11-diol Status: evidence in vitro
Confirmation methods: in vitro (membrane preparation), in vitro (mutatio ID: 2157 Notes: UDP-[3H]Glc, UDP-[3H]Gal, UDP-[3H]GlcNAc and UDP-[3H]GalNAc were all donor substrates for WclY(O117), with 100%, 11%, 7% and 7% activity, respectively. | Organism (ID 4054): Escherichia coli O117 Full structure (ID 35737): | ||
| Synthesized dimer: aDGlcp(1-4)bDGalp Donor (ID 35630): ?DGlcp(1-P-P-5)xXnucT Acceptor (ID 35736): bDGalp(1-3)[Ac(1-2)]aDGalpN(1-P-P-1)[Ph(1-11)]Subst // Subst = undecan-1,11-diol Status: evidence in vitro
Confirmation methods: in vitro (membrane preparation), in vitro (mutatio ID: 2158 Notes: UDP-[3H]Glc, UDP-[3H]Gal, UDP-[3H]GlcNAc and UDP-[3H]GalNAc were all donor substrates for WclY(O117), with 100%, 11%, 7% and 7% activity, respectively. The Gal-T activities were obsereved only with membrane preparations, but not with the purified protein. | Organism (ID 4054): Escherichia coli O117 Full structure (ID 35737): | ||
| Synthesized dimer: DGlcpN(1-4)bDGalp Donor (ID 35226): Ac(1-2)?DGlcpN(1-P-P-5)xXnucU Acceptor (ID 35736): bDGalp(1-3)[Ac(1-2)]aDGalpN(1-P-P-1)[Ph(1-11)]Subst // Subst = undecan-1,11-diol Status: evidence in vitro
Confirmation methods: in vitro (membrane preparation), in vitro (mutatio ID: 2159 Notes: UDP-[3H]Glc, UDP-[3H]Gal, UDP-[3H]GlcNAc and UDP-[3H]GalNAc were all donor substrates for WclY(O117), with 100%, 11%, 7% and 7% activity, respectively. The Gal-T activities were obsereved only with membrane preparations, but not with the purified protein. | Organism (ID 4054): Escherichia coli O117 Full structure (ID 35739): | ||
| Synthesized dimer: DGalp(1-4)bDGalp Donor (ID 35273): ?DGalp(1-P-P-5)xXnucU Acceptor (ID 35736): bDGalp(1-3)[Ac(1-2)]aDGalpN(1-P-P-1)[Ph(1-11)]Subst // Subst = undecan-1,11-diol Status: evidence in vitro
Confirmation methods: in vitro (membrane preparation), in vitro (mutatio ID: 2160 Notes: UDP-[3H]Glc, UDP-[3H]Gal, UDP-[3H]GlcNAc and UDP-[3H]GalNAc were all donor substrates for WclY(O117), with 100%, 11%, 7% and 7% activity, respectively. The Gal-T activities were obsereved only with membrane preparations, but not with the purified protein. | Organism (ID 4054): Escherichia coli O117 Full structure (ID 35740): | ||
| Synthesized dimer: DGalpN(1-4)bDGalp Donor (ID 35669): Ac(1-2)?DGalpN(1-P-P-5)xXnucU Acceptor (ID 35736): bDGalp(1-3)[Ac(1-2)]aDGalpN(1-P-P-1)[Ph(1-11)]Subst // Subst = undecan-1,11-diol Status: evidence in vitro
Confirmation methods: in vitro (membrane preparation), in vitro (mutatio ID: 2161 Notes: UDP-[3H]Glc, UDP-[3H]Gal, UDP-[3H]GlcNAc and UDP-[3H]GalNAc were all donor substrates for WclY(O117), with 100%, 11%, 7% and 7% activity, respectively. The Gal-T activities were obsereved only with membrane preparations, but not with the purified protein. | Organism (ID 4054): Escherichia coli O117 Full structure (ID 35741): | ||
| Enzyme name: WclX UniProt ID: B8QSJ9* CAZy family: GT2 Gene name: wclX Gene cluster ID: EU694095 | Synthesized dimer: aLRhap(1-4)aDGlcpN Status: predicted in silico
Confirmation methods: in silico ID: 2162 | Organism (ID 6228): Escherichia coli O107 H705 Full structure (ID 14742): CSDB ID(s): 1846, 5056, 27352 Molecule role: O-antigen | Wang et al. 2009 DOI: 10.1111/j.1574-695X.2008.00494.x |
| Synthesized dimer: aLRhap(1-4)aDGlcp Status: predicted in silico
Confirmation methods: in silico ID: 2163 | Organism (ID 6229): Escherichia coli O117 W30 Full structure (ID 2704): CSDB ID(s): 1857, 3145, 20704, 21517, 24256, 28683, 32135 Molecule role: O-antigen | ||
| Enzyme name: WclZ UniProt ID: B8QSK1* CAZy family: GT2 | Synthesized dimer: bDGalp(1-3)aDGalpN Status: predicted in silico
Confirmation methods: in silico ID: 2164 | Organism (ID 6228): Escherichia coli O107 H705 Full structure (ID 14742): CSDB ID(s): 1846, 5056, 23872, 27352 Molecule role: O-antigen | |
| Synthesized dimer: bDGalp(1-3)aDGalpN Status: predicted in silico
Confirmation methods: in silico ID: 2165 | Organism (ID 6229): Escherichia coli O117 W30 Full structure (ID 2704): CSDB ID(s): 1857, 3145, 20704, 21517, 24256, 28683, 32135 Molecule role: O-antigen | ||
| Enzyme name: WbbG Group: WbbG UniProt ID: Q0H8C8* CAZy family: GT4 Gene cluster ID: DQ167407 | Synthesized dimer: aDGlcp(1-3)aDGlcpN Status: indirect evidence in vivo
Confirmation methods: mutation (knockout), in silico ID: 2166 Notes: Repeating unit of the O148 antigen. | Organism (ID 16370): Escherichia coli O148:H28 E 519-66 Full structure (ID 7633): CSDB ID(s): 1889, 3397, 3638, 11572, 12628, 21578, 23062, 26257, 27289 Molecule role: O-antigen | Feng et al. 2007 DOI: 10.1099/mic.0.2006/001107-0 |
| Enzyme name: WbbI UniProt ID: P37749 Gene name: wbbI Gene GenBank ID: 947041* | Synthesized dimer: bDGalf(1-6)aDGlcp Donor (ID 35742): ?DGalf(1-P-P-5)xXnucU Acceptor (ID 35743): aDGlcp(1-1)Oc Status: evidence in vitro
Confirmation methods: in vitro (purified protein) ID: 2167 | Organism (ID 21): Escherichia coli K12 Full structure (ID 35744): Molecule role (analog of): O-antigen | Wing et al. 2006 DOI: 10.1039/b609455d |
| Synthesized dimer: bDGalf(1-6)aDManp Donor (ID 35742): ?DGalf(1-P-P-5)xXnucU Acceptor (ID 35745): aDManp(1-1)Oc Status: evidence in vitro
Confirmation methods: in vitro (purified protein) ID: 2168 | Organism (ID 21): Escherichia coli K12 Full structure (ID 35746): Molecule role (analog of): O-antigen | ||
| Synthesized dimer: bDGalf(1-6)aDGalp Donor (ID 35742): ?DGalf(1-P-P-5)xXnucU Acceptor (ID 35747): aDGalp(1-1)Oc Status: evidence in vitro
Confirmation methods: in vitro (purified protein) ID: 2169 | Organism (ID 21): Escherichia coli K12 Full structure (ID 35748): Molecule role (analog of): O-antigen | ||
| Synthesized dimer: bDGalf(1-6)aDGlcpN Donor (ID 35742): ?DGalf(1-P-P-5)xXnucU Acceptor (ID 35749): Ac(1-2)aDGlcpN(1-1)Oc Status: evidence in vitro
Confirmation methods: in vitro (purified protein) ID: 2170 | Organism (ID 21): Escherichia coli K12 Full structure (ID 35750): Molecule role (analog of): O-antigen | ||
| Synthesized dimer: bDGalf(1-6)aDGlcp Donor (ID 35742): ?DGalf(1-P-P-5)xXnucU Status: suggested
Confirmation methods: based on the structure found in vivo ID: 2171 Notes: Repeating unit of the K12 O-antigen. | Organism (ID 21): Escherichia coli K12 Full structure (ID 272): CSDB ID(s): 1517, 2061, 10218, 11636, 12607, 20109, 22422, 30068, 30969 Molecule role: O-antigen | ||
| Enzyme name: WbdL UniProt ID: C8UCY1* CAZy family: GT2 | Synthesized dimer: aColp(1-3)aDGlcp Status: indirect evidence in vivo
Confirmation methods: mutation ID: 2172 Notes: Repeating unit of the O111 antigen. | Organism (ID 532): Escherichia coli O111 Full structure (ID 928): CSDB ID(s): 616, 1850, 3376, 7142, 7251, 13076, 20510, 20672, 22734, 24804, 25636, 26677, 27188, 27434, 28327, 29928, 30270, 30359, 108624, 108672, 113760 Molecule role: O-antigen | Stevenson et al. 2008 DOI: 10.1128/AEM.02660-07 |
| Synthesized dimer: aColp(1-6)aDGlcp Status: indirect evidence in vivo
Confirmation methods: mutation ID: 2173 Notes: Repeating unit of the O111 antigen. | Organism (ID 532): Escherichia coli O111 Full structure (ID 928): CSDB ID(s): 616, 1850, 3376, 7142, 7251, 13076, 20510, 20672, 22734, 24804, 25636, 26677, 27188, 27434, 28327, 29928, 30270, 30359, 108624, 108672, 113760 Molecule role: O-antigen | ||
| Enzyme name: WbdM UniProt ID: C8UCY0* CAZy family: GT4 | Synthesized dimer: aDGlcp(1-4)aDGalp Status: indirect evidence in vivo
Confirmation methods: mutation ID: 2174 Notes: Repeating unit of the O111 antigen. | Organism (ID 532): Escherichia coli O111 Full structure (ID 928): CSDB ID(s): 616, 1850, 3376, 7142, 7251, 13076, 20510, 20672, 22734, 24804, 25636, 26677, 27188, 27434, 28327, 29928, 30270, 30359, 108624, 108672, 113760 Molecule role: O-antigen | |
| Enzyme name: WbdH UniProt ID: C8UCZ0* CAZy family: GT4 | Synthesized dimer: aDGalp(1-3)bDGlcpN Status: indirect evidence in vivo
Confirmation methods: mutation ID: 2175 Notes: Repeating unit of the O111 antigen. | Organism (ID 532): Escherichia coli O111 Full structure (ID 928): CSDB ID(s): 616, 1850, 3376, 7142, 7251, 13076, 20510, 20672, 22734, 24804, 25636, 26677, 27188, 27434, 28327, 29928, 30270, 30359, 108624, 108672, 113760 Molecule role: O-antigen | |
| Enzyme name: WbgM UniProt ID: B1B4R5* CAZy family: GT4 | Synthesized dimer: aDGalp(1-3)bDGalpN Status: predicted in silico
Confirmation methods: in silico ID: 2176 | Organism (ID 4390): Escherichia coli O55:H7 Full structure (ID 799): CSDB ID(s): 1562, 2218, 2369, 5554, 7239, 12676, 13080, 20658, 24242, 27445, 28398, 30374, 108629, 113595 Molecule role: O-antigen | Wang et al. 2002 DOI: 10.1128/JB.184.10.2620-2625.2002 |
| Enzyme name: WbgO UniProt ID: B1B4J9 CAZy family: GT2 | Synthesized dimer: bDGalp(1-3)DGlcpN Donor (ID 35273): ?DGalp(1-P-P-5)xXnucU Acceptor (ID 35751): Ac(1-2)?DGlcpN Status: evidence in vitro
Confirmation methods: in vitro (purified protein) ID: 2177 | Organism (ID 4390): Escherichia coli O55:H7 Full structure (ID 55): CSDB ID(s): 1737, 12458, 30210 Molecule role (analog of): O-antigen | Liu et al. 2009 DOI: 10.1016/j.bmc.2009.06.005 |
| Synthesized dimer: bDGalp(1-3)DGalpN Donor (ID 35273): ?DGalp(1-P-P-5)xXnucU Acceptor (ID 35674): Ac(1-2)?DGalpN Status: evidence in vitro
Confirmation methods: in vitro (purified protein) ID: 2178 | Organism (ID 4390): Escherichia coli O55:H7 Full structure (ID 35675): Molecule role (analog of): O-antigen | ||
| Synthesized dimer: bDGalp(1-3)bDGlcpN Donor (ID 35273): ?DGalp(1-P-P-5)xXnucU Acceptor (ID 35752): Ac(1-2)bDGlcpN(1-1)Subst // Subst = 4-nitrophenol = SMILES C1=C{1}C(=CC=C1[N+](=O)[O-])O Status: evidence in vitro
Confirmation methods: in vitro (purified protein) ID: 2179 | Organism (ID 4390): Escherichia coli O55:H7 Full structure (ID 35753): Molecule role (analog of): O-antigen | ||
| Synthesized dimer: bDGalp(1-3)bDGlcpN Donor (ID 35273): ?DGalp(1-P-P-5)xXnucU Acceptor (ID 35754): Ac(1-2)bDGlcpN(1-3)bDGalp(1-4)bDGlcp(1-7)Bn Status: evidence in vitro
Confirmation methods: in vitro (purified protein) ID: 2180 | Organism (ID 4390): Escherichia coli O55:H7 Full structure (ID 35755): Molecule role (analog of): O-antigen | ||
| Synthesized dimer: bDGalp(1-3)bDGalpN Donor (ID 35273): ?DGalp(1-P-P-5)xXnucU Acceptor (ID 35756): Ac(1-2)bDGalpN(1-3)aDGalp(1-3)bDGalp(1-4)bDGlcp(1-1)Me Status: evidence in vitro
Confirmation methods: in vitro (purified protein) ID: 2181 | Organism (ID 4390): Escherichia coli O55:H7 Full structure (ID 35757): Molecule role (analog of): O-antigen | ||
| Synthesized dimer: bDGalp(1-3)bDGalpN Donor (ID 35273): ?DGalp(1-P-P-5)xXnucU Acceptor (ID 35758): Ac(1-2)bDGalpN(1-3)aDGalp(1-4)bDGalp(1-4)bDGlcp(1-1)Subst // Subst = azide Status: evidence in vitro
Confirmation methods: in vitro (purified protein) ID: 2182 | Organism (ID 4390): Escherichia coli O55:H7 Full structure (ID 35759): Molecule role (analog of): O-antigen | ||
| Synthesized dimer: bDGalp(1-3)bDGalpN Donor (ID 35273): ?DGalp(1-P-P-5)xXnucU Acceptor (ID 35760): Ac(1-2)bDGalpN(1-3)bDGalp(1-4)?DGlcp Status: evidence in vitro
Confirmation methods: in vitro (purified protein) ID: 2183 | Organism (ID 4390): Escherichia coli O55:H7 Full structure (ID 35761): Molecule role (analog of): O-antigen | ||
| Synthesized dimer: bDGalp(1-3)bDGlcpN Donor (ID 35273): ?DGalp(1-P-P-5)xXnucU Status: suggested
Confirmation methods: based on the structure found in vivo ID: 2184 Notes: Repeating unit of the O55 antigen. | Organism (ID 4390): Escherichia coli O55:H7 Full structure (ID 799): CSDB ID(s): 1562, 2218, 2369, 5554, 7239, 12676, 13080, 20658, 24242, 27445, 28398, 30374, 108629, 113595 Molecule role: O-antigen | ||
| Enzyme name: WbgN UniProt ID: B1B4K2 CAZy family: GT11 | Synthesized dimer: aColp(1-2)bDGalp Donor (ID 35762): bXColp(1-P-P-5)xXnucG Acceptor (ID 11539): bDGalp(1-3)[Ac(1-2)]?DGlcpN Status: evidence in vitro
Confirmation methods: in vitro (purified protein) ID: 2185 | Organism (ID 4390): Escherichia coli O55:H7 Full structure (ID 35763): Molecule role (analog of): O-antigen | Wu et al. 2016 DOI: 10.1093/glycob/cwv169 |
| Synthesized dimer: aLFucp(1-2)bDGalp Donor (ID 35324): bLFucp(1-P-P-5)xXnucG Acceptor (ID 11539): bDGalp(1-3)[Ac(1-2)]?DGlcpN Status: evidence in vitro
Confirmation methods: in vitro (purified protein) ID: 2186 | Organism (ID 4390): Escherichia coli O55:H7 Full structure (ID 35764): Molecule role (analog of): O-antigen | ||
| Synthesized dimer: aColp(1-2)bDGalp Donor (ID 35762): bXColp(1-P-P-5)xXnucG Status: suggested
Confirmation methods: based on the structure found in vivo ID: 2187 Notes: Repeating unit of the O55 antigen. | Organism (ID 4390): Escherichia coli O55:H7 Full structure (ID 799): CSDB ID(s): 1562, 2218, 2369, 5554, 7239, 12676, 13080, 20658, 24242, 27445, 28398, 30374, 108629, 113595 Molecule role: O-antigen | ||
| Enzyme name: WbgL UniProt ID: E2DNL9* CAZy family: GT11 | Synthesized dimer: aLFucp(1-2)bDGalp Donor (ID 35324): bLFucp(1-P-P-5)xXnucG Status: suggested
Confirmation methods: based on the structure found in vivo ID: 2188 Notes: Repeating unit of the O126 antigen. | Organism (ID 1063): Escherichia coli O126 Full structure (ID 1748): CSDB ID(s): 1865, 9273, 20679, 21878 Molecule role: O-antigen | Engels et al. 2014 DOI: 10.1093/glycob/cwt096 |
| Synthesized dimer: aLFucp(1-2)DGalp Donor (ID 35324): bLFucp(1-P-P-5)xXnucG Acceptor (ID 35765): ?DGalp Status: evidence in vitro
Confirmation methods: in vitro (purified protein) ID: 2189 | Organism (ID 1063): Escherichia coli O126 Full structure (ID 35766): Molecule role (analog of): O-antigen | ||
| Synthesized dimer: aLFucp(1-2)bDGalp Donor (ID 35324): bLFucp(1-P-P-5)xXnucG Acceptor (ID 35767): bDGalp(1-4)?DGlcp Status: evidence in vitro
Confirmation methods: in vitro (purified protein) ID: 2190 | Organism (ID 1063): Escherichia coli O126 Full structure (ID 35768): Molecule role (analog of): O-antigen | ||
| Synthesized dimer: aLFucp(1-2)bDGalp Donor (ID 35324): bLFucp(1-P-P-5)xXnucG Acceptor (ID 11540): bDGalp(1-4)[Ac(1-2)]?DGlcpN Status: evidence in vitro
Confirmation methods: in vitro (purified protein) ID: 2191 | Organism (ID 1063): Escherichia coli O126 Full structure (ID 35769): Molecule role (analog of): O-antigen | ||
| Synthesized dimer: aLFucp(1-2)bDGalp Donor (ID 35324): bLFucp(1-P-P-5)xXnucG Acceptor (ID 11539): bDGalp(1-3)[Ac(1-2)]?DGlcpN Status: evidence in vitro
Confirmation methods: in vitro (purified protein) ID: 2192 | Organism (ID 1063): Escherichia coli O126 Full structure (ID 35764): Molecule role (analog of): O-antigen | ||
| Synthesized dimer: aLFucp(1-2)bDGalp Donor (ID 35324): bLFucp(1-P-P-5)xXnucG Acceptor (ID 35770): bDGalp(1-4)??Fru? Status: evidence in vitro
Confirmation methods: in vitro (purified protein) ID: 2193 | Organism (ID 1063): Escherichia coli O126 Full structure (ID 35771): Molecule role (analog of): O-antigen | ||
| Enzyme name: WbiQ UniProt ID: B7UT67* CAZy family: GT11 | Synthesized dimer: aLFucp(1-2)bDGalp Donor (ID 35324): bLFucp(1-P-P-5)xXnucG Status: suggested
Confirmation methods: based on the structure found in vivo ID: 2194 Notes: Repeating unit of the O127 antigen. | Organism (ID 16364): Escherichia coli O127:K63(B8) Full structure (ID 985): CSDB ID(s): 7241, 10220, 20680, 25395, 28397, 108675, 117352 Molecule role: O-antigen | Pettit et al. 2010 DOI: 10.1016/j.bbrc.2010.08.087 |
| Synthesized dimer: aLFucp(1-2)bDGalp Donor (ID 35324): bLFucp(1-P-P-5)xXnucG Acceptor (ID 35772): bDGalp(1-3)[Ac(1-2)]?DGalpN(1-1)Me Status: evidence in vitro
Confirmation methods: in vitro (purified protein) ID: 2195 Notes: The resulting structure is the H-type 3 blood group antigen. | Organism (ID 16364): Escherichia coli O127:K63(B8) Full structure (ID 35773): Molecule role (analog of): O-antigen | ||
| Synthesized dimer: aLFucp(1-2)bDGalp Donor (ID 35324): bLFucp(1-P-P-5)xXnucG Acceptor (ID 35774): bDGalp(1-3)[Ac(1-2)]?DGalpN Status: evidence in vitro
Confirmation methods: in vitro (purified protein) ID: 2196 | Organism (ID 16364): Escherichia coli O127:K63(B8) Full structure (ID 35775): Molecule role (analog of): O-antigen | ||
| Enzyme name: WbsJ UniProt ID: Q6XQ53* CAZy family: GT11 | Synthesized dimer: aLFucp(1-2)bDGalp Donor (ID 35324): bLFucp(1-P-P-5)xXnucG Status: suggested
Confirmation methods: based on the structure found in vivo ID: 2197 Notes: Repeating unit of the O128 antigen. | Organism (ID 4457): Escherichia coli O128:B12 Full structure (ID 984): CSDB ID(s): 1867, 2367, 4646, 7240, 8302, 20681, 22685, 22801, 26277 Molecule role: O-antigen | Shao et al. 2003 DOI: 10.1016/S0014-5793(03)00980-3 Li et al. 2008a DOI: 10.1021/bi701345v |
| Synthesized dimer: aLFucp(1-2)bDGalp Donor (ID 35324): bLFucp(1-P-P-5)xXnucG Acceptor (ID 35462): bDGalp(1-1)Me Status: evidence in vitro
Confirmation methods: in vitro (purified protein) ID: 2198 | Organism (ID 16371): Escherichia coli O128:B12:H Full structure (ID 3272): CSDB ID(s): 4790, 23039 Molecule role (analog of): O-antigen | ||
| Synthesized dimer: aLFucp(1-2)bDGalp Donor (ID 35324): bLFucp(1-P-P-5)xXnucG Acceptor (ID 35767): bDGalp(1-4)?DGlcp Status: evidence in vitro
Confirmation methods: in vitro (purified protein) ID: 2199 | Organism (ID 4457): Escherichia coli O128:B12 Full structure (ID 35768): Molecule role (analog of): O-antigen | Li et al. 2008b DOI: 10.1021/bi801067s Li et al. 2008a DOI: 10.1021/bi701345v | |
| Synthesized dimer: aLFucp(1-2)bDGalp Donor (ID 35324): bLFucp(1-P-P-5)xXnucG Acceptor (ID 35776): bDGalp(1-4)?DGlcp(1-1)Subst // Subst = azide Status: evidence in vitro
Confirmation methods: in vitro (purified protein) ID: 2200 | Organism (ID 4457): Escherichia coli O128:B12 Full structure (ID 35777): Molecule role (analog of): O-antigen | Li et al. 2008a DOI: 10.1021/bi701345v | |
| Synthesized dimer: aLFucp(1-2)bDGalp Donor (ID 35324): bLFucp(1-P-P-5)xXnucG Acceptor (ID 35778): bDGalp(1-4)bDGlcp(1-1)Ph Status: evidence in vitro
Confirmation methods: in vitro (purified protein) ID: 2201 | Organism (ID 4457): Escherichia coli O128:B12 Full structure (ID 35779): Molecule role (analog of): O-antigen | ||
| Synthesized dimer: aLFucp(1-2)bDGalp Donor (ID 35324): bLFucp(1-P-P-5)xXnucG Acceptor (ID 35780): bDGalp(1-4)bDGlcp(1-1)Subst // Subst = thiophenol Status: evidence in vitro
Confirmation methods: in vitro (purified protein) ID: 2202 | Organism (ID 4457): Escherichia coli O128:B12 Full structure (ID 35781): Molecule role (analog of): O-antigen | ||
| Synthesized dimer: aLFucp(1-2)bDGalp Donor (ID 35324): bLFucp(1-P-P-5)xXnucG Acceptor (ID 35782): bDGalp(1-4)bDGlcp1N(1-1)Ac Status: evidence in vitro
Confirmation methods: in vitro (purified protein) ID: 2203 | Organism (ID 4457): Escherichia coli O128:B12 Full structure (ID 35783): Molecule role (analog of): O-antigen | ||
| Synthesized dimer: aLFucp(1-2)bDGalp Donor (ID 35324): bLFucp(1-P-P-5)xXnucG Acceptor (ID 35784): bDGalp(1-1)Subst // Subst = 4-nitrophenol = SMILES C1=C{1}C(=CC=C1[N+](=O)[O-])O Status: evidence in vitro
Confirmation methods: in vitro (purified protein) ID: 2204 | Organism (ID 4457): Escherichia coli O128:B12 Full structure (ID 35785): Molecule role (analog of): O-antigen | ||
| Synthesized dimer: aLFucp(1-2)DGalp Donor (ID 35324): bLFucp(1-P-P-5)xXnucG Acceptor (ID 35765): ?DGalp Status: evidence in vitro
Confirmation methods: in vitro (purified protein) ID: 2205 | Organism (ID 4457): Escherichia coli O128:B12 Full structure (ID 35766): Molecule role (analog of): O-antigen | ||
| Synthesized dimer: aLFucp(1-2)bDGalp Donor (ID 35324): bLFucp(1-P-P-5)xXnucG Acceptor (ID 11540): bDGalp(1-4)[Ac(1-2)]?DGlcpN Status: evidence in vitro
Confirmation methods: in vitro (purified protein) ID: 2206 | Organism (ID 4457): Escherichia coli O128:B12 Full structure (ID 35769): Molecule role (analog of): O-antigen | ||
| Synthesized dimer: aLFucp(1-2)bDGalp Donor (ID 35324): bLFucp(1-P-P-5)xXnucG Acceptor (ID 35786): bDGalp(1-4)?DFruf Status: evidence in vitro
Confirmation methods: in vitro (purified protein), mutation (in recombinant protein) ID: 2207 | Organism (ID 4457): Escherichia coli O128:B12 Full structure (ID 35787): Molecule role (analog of): O-antigen | Li et al. 2008b DOI: 10.1021/bi801067s Li et al. 2008a DOI: 10.1021/bi701345v | |
| Synthesized dimer: aLFucp(1-2)bDGalp Donor (ID 35324): bLFucp(1-P-P-5)xXnucG Acceptor (ID 19624): bDGalp(1-4)?DManp Status: evidence in vitro
Confirmation methods: in vitro (purified protein) ID: 2208 | Organism (ID 4457): Escherichia coli O128:B12 Full structure (ID 35788): Molecule role (analog of): O-antigen | ||
| Synthesized dimer: aLFucp(1-2)bDGalp Donor (ID 35324): bLFucp(1-P-P-5)xXnucG Acceptor (ID 35663): bDGalp(1-3)[Ac(1-2)]aDGalpN(1-1)Ph Status: evidence in vitro
Confirmation methods: in vitro (purified protein) ID: 2209 | Organism (ID 4457): Escherichia coli O128:B12 Full structure (ID 35664): Molecule role (analog of): O-antigen | Li et al. 2008a DOI: 10.1021/bi701345v | |
| Synthesized dimer: aLFucp(1-2)bDGalp Donor (ID 35324): bLFucp(1-P-P-5)xXnucG Acceptor (ID 35657): bDGalp(1-3)[Ac(1-2)]aDGalpN(1-1)Me Status: evidence in vitro
Confirmation methods: in vitro (purified protein) ID: 2210 | Organism (ID 4457): Escherichia coli O128:B12 Full structure (ID 9162): CSDB ID(s): 25807 Molecule role (analog of): O-antigen | Li et al. 2008b DOI: 10.1021/bi801067s Li et al. 2008a DOI: 10.1021/bi701345v | |
| Enzyme name: WbuP UniProt ID: B3U3P1* CAZy family: GT2 | Synthesized dimer: bDGalp(1-3)aDGlcpN Donor (ID 35273): ?DGalp(1-P-P-5)xXnucU Status: suggested
Confirmation methods: based on the structure found in vivo ID: 2211 Notes: Repeating unit of the O114 antigen. | Organism (ID 1096): Escherichia coli O114 Full structure (ID 1814): CSDB ID(s): 1854, 9539, 20674, 21147, 22457, 25584, 28333, 29401, 108673, 122750, 137911 Molecule role: O-antigen | Zhou et al. 2013 DOI: 10.1016/j.carres.2013.08.021 |
| Synthesized dimer: bDGalp(1-3)aDGlcpN Donor (ID 35273): ?DGalp(1-P-P-5)xXnucU Acceptor (ID 35619): Ac(1-2)aDGlcpN(1-P-P-1)[Ph(1-11)]Subst // Subst = undecan-1,11-diol Status: evidence in vitro
Confirmation methods: in vitro (purified protein) ID: 2212 | Organism (ID 1096): Escherichia coli O114 Full structure (ID 35642): Molecule role (analog of): O-antigen | ||
| Enzyme name: WbdN UniProt ID: Q7DBF0* | Synthesized dimer: bDGlcp(1-3)aDGalpN Donor (ID 34839): ?DGlcp(1-P-P-5)xXnucU Acceptor (ID 35649): Ac(1-2)aDGalpN(1-P-P-1)[Ph(1-11)]Subst // Subst = undecan-1,11-diol Status: evidence in vitro
Confirmation methods: in vitro (purified protein) ID: 2213 | Organism (ID 584): Escherichia coli O157 Full structure (ID 35789): Molecule role (analog of): O-antigen | Gao et al. 2012 DOI: 10.1093/glycob/cws081 |
| Synthesized dimer: bDGlcp(1-3)aDGalpN Donor (ID 34839): ?DGlcp(1-P-P-5)xXnucU Status: suggested
Confirmation methods: based on the structure found in vivo ID: 2214 Notes: Repeating unit of the O157 antigen. | Organism (ID 584): Escherichia coli O157 Full structure (ID 34): CSDB ID(s): 695, 1170, 1619, 1898, 3312, 3776, 3909, 7417, 8630, 8701, 8988, 12944, 20690, 21404, 25635, 27158, 27338, 27347, 27497, 29975, 30358, 31485, 31911, 105778, 108622, 108677, 130570 Molecule role: O-antigen | ||
| Synthesized dimer: bDGlcp(1-3)aDGalpN Donor (ID 34839): ?DGlcp(1-P-P-5)xXnucU Acceptor (ID 35651): Ac(1-2)aDGalpN(1-P-P-1)Subst // Subst = 11-(anthracen-9-ylmethoxy)undecan-1-diol Status: evidence in vitro
Confirmation methods: in vitro (crude extract) ID: 2215 | Organism (ID 584): Escherichia coli O157 Full structure (ID 35790): Molecule role (analog of): O-antigen | Vinnikova et al. 2013 DOI: 10.1016/j.carres.2012.11.009 | |
| Enzyme name: WbwA UniProt ID: Q93NP9* Gene name: wbwA Gene cluster ID: AF361371 | Synthesized dimer: aNeu(2-3)bDGalp Donor (ID 35791): Ac(1-5)aXNeu(2-P-5)xXnucC Status: predicted in silico
Confirmation methods: in silico ID: 2216 Notes: Repeating unit of the O104 antigen. | Organism (ID 851): Escherichia coli O104 Full structure (ID 35653): CSDB ID(s): 20671 Molecule role: O-antigen | Wang et al. 2001 DOI: 10.1016/S0378-1119(01)00471-1 Czuchry et al. 2015 DOI: 10.1128/JB.00521-15 |
| Synthesized dimer: aNeu(2-3)bDGalp Donor (ID 35791): Ac(1-5)aXNeu(2-P-5)xXnucC Acceptor (ID 35736): bDGalp(1-3)[Ac(1-2)]aDGalpN(1-P-P-1)[Ph(1-11)]Subst // Subst = undecan-1,11-diol Status: evidence in vitro
Confirmation methods: in vitro (purified protein) ID: 2217 | Organism (ID 851): Escherichia coli O104 Full structure (ID 35792): Molecule role (analog of): O-antigen | Czuchry et al. 2015 DOI: 10.1128/JB.00521-15 | |
| Enzyme name: WbwB UniProt ID: Q93NP7* CAZy family: GT4 Gene name: wbwB Gene cluster ID: AF361371 | Synthesized dimer: aDGalp(1-4)aNeu Status: predicted in silico
Confirmation methods: in silico ID: 2218 Notes: Repeating unit of the O104 antigen. | Organism (ID 851): Escherichia coli O104 Full structure (ID 35653): CSDB ID(s): 20671 Molecule role: O-antigen | Wang et al. 2001 DOI: 10.1016/S0378-1119(01)00471-1 |
| Enzyme name: WbaD UniProt ID: Q1L815* CAZy family: GT4 Gene name: wbaD Gene GenBank ID: 7156002* | Synthesized dimer: bDManp(1-3)aDGlcpN Donor (ID 35793): ?DManp(1-P-P-5)xXnucG Acceptor (ID 35619): Ac(1-2)aDGlcpN(1-P-P-1)[Ph(1-11)]Subst // Subst = undecan-1,11-diol Status: evidence in vitro
Confirmation methods: in vitro (membrane preparations) ID: 2219 | Organism (ID 16372): Escherichia coli O77:K96 Full structure (ID 35794): Molecule role (analog of): O-antigen | Zhou et al. 2016 DOI: 10.1016/j.carres.2016.02.007 |
| Synthesized dimer: bDManp(1-3)aDGlcpN Donor (ID 35793): ?DManp(1-P-P-5)xXnucG Status: predicted in silico
Confirmation methods: in silico ID: 2220 Notes: Repeating unit of the O77 antigen. | Organism (ID 1918): Escherichia coli O77 Full structure (ID 3446): CSDB ID(s): 359, 1583, 2675, 5925, 11268, 12791, 20665, 21421, 25629, 27423, 30340, 105802, 105825, 108621 Molecule role: O-antigen | Zhou et al. 2016 DOI: 10.1016/j.carres.2016.02.007 Wang et al. 2007 DOI: 10.1099/mic.0.2007/004192-0 | |
| Enzyme name: WbaC UniProt ID: Q1L822* CAZy family: GT4 Gene name: wbaC Gene GenBank ID: 7158222* | Synthesized dimer: aDManp(1-2)bDManp Donor (ID 35793): ?DManp(1-P-P-5)xXnucG Acceptor (ID 35795): bDManp(1-3)[Ac(1-2)]aDGlcpN(1-P-P-1)[Ph(1-11)]Subst // Subst = undecan-1,11-diol Status: evidence in vitro
Confirmation methods: in vitro (membrane preparations) ID: 2221 Notes: The product was synthesized in the presence of both WbaC and WbaD (which added the first Man to Ac(1-2)aDGalpN(1-P-P-1)[Ph(1-11)]Subst // Subst = undecan-1,11-diol). | Organism (ID 16372): Escherichia coli O77:K96 Full structure (ID 35796): Molecule role (analog of): O-antigen | Zhou et al. 2016 DOI: 10.1016/j.carres.2016.02.007 |
| Synthesized dimer: aDManp(1-2)aDManp Donor (ID 35793): ?DManp(1-P-P-5)xXnucG Acceptor (ID 35797): aDManp(1-2)bDManp(1-3)[Ac(1-2)]aDGlcpN(1-P-P-1)[Ph(1-11)]Subst // Subst = undecan-1,11-diol Status: evidence in vitro
Confirmation methods: in vitro (membrane preparations) ID: 2222 Notes: The product was synthesized in the presence of both WbaC and WbaD (which added the first Man to Ac(1-2)aDGalpN(1-P-P-1)[Ph(1-11)]Subst // Subst = undecan-1,11-diol). | Organism (ID 16372): Escherichia coli O77:K96 Full structure (ID 35798): Molecule role (analog of): O-antigen | ||
| Synthesized dimer: aDManp(1-2)aDManp Donor (ID 35793): ?DManp(1-P-P-5)xXnucG Status: predicted in silico
Confirmation methods: in silico ID: 2223 Notes: Repeating unit of the O77 antigen. | Organism (ID 1918): Escherichia coli O77 Full structure (ID 3446): CSDB ID(s): 359, 1583, 2675, 5925, 11268, 12791, 20665, 21421, 25629, 27423, 30340, 105802, 105825, 108621 Molecule role: O-antigen | Zhou et al. 2016 DOI: 10.1016/j.carres.2016.02.007 Wang et al. 2007 DOI: 10.1099/mic.0.2007/004192-0 | |
| Synthesized dimer: aDManp(1-2)bDManp Donor (ID 35793): ?DManp(1-P-P-5)xXnucG Status: predicted in silico
Confirmation methods: in silico ID: 2224 Notes: Repeating unit of the O77 antigen. | Organism (ID 1918): Escherichia coli O77 Full structure (ID 3446): CSDB ID(s): 359, 1583, 2675, 5925, 11268, 12791, 20665, 21421, 25629, 27423, 30340, 105802, 105825, 108621 Molecule role: O-antigen | ||
| Enzyme name: WbaP UniProt ID: Q9X4C0* | Synthesized dimer: P(?-?)P Donor (ID 35273): ?DGalp(1-P-P-5)xXnucU Acceptor (ID 35735): P-1)Subst // Subst = undecaprenol Status: predicted in silico
Confirmation methods: in silico ID: 2225 Notes: Phosphodiester bond is synthesized. | Organism (ID 16373): Escherichia coli O9a:K30 Full structure (ID 35799): | Drummelsmith et al. 1999 DOI: 10.1046/j.1365-2958.1999.01277.x |
| Enzyme name: WbaZ UniProt ID: Q9X4C6* CAZy family: GT4 | Synthesized dimer: aDManp(1-3)bDGalp Donor (ID 35793): ?DManp(1-P-P-5)xXnucG Acceptor (ID 35800): bDGalp(1-P-P-1)Subst // Subst = undecaprenol Status: predicted in silico
Confirmation methods: in silico ID: 2226 | Organism (ID 16373): Escherichia coli O9a:K30 Full structure (ID 35801): | |
| Enzyme name: WcaJ UniProt ID: P71241* Gene name: wcaJ Gene GenBank ID: 946583* | Synthesized dimer: P(?-?)P Donor (ID 34839): ?DGlcp(1-P-P-5)xXnucU Acceptor (ID 35735): P-1)Subst // Subst = undecaprenol Status: evidence in vitro
Confirmation methods: in vitro (membrane preparation) ID: 2227 Notes: WcaJ is required for production of colanic acid. | Organism (ID 21): Escherichia coli K12 Full structure (ID 35802): | Patel et al. 2012 DOI: 10.1128/JB.06052-11 |
| Enzyme name: WcaN UniProt ID: Q9X4C3* CAZy family: GT2 | Synthesized dimer: bDGlcpA(1-3)aDGalp Status: predicted in silico
Confirmation methods: in silico ID: 2228 | Organism (ID 16373): Escherichia coli O9a:K30 Full structure (ID 35803): | Drummelsmith et al. 1999 DOI: 10.1046/j.1365-2958.1999.01277.x |
| Enzyme name: WcaO UniProt ID: Q9X4C4* CAZy family: GT4 | Synthesized dimer: aDGalp(1-3)aDManp Status: predicted in silico
Confirmation methods: in silico ID: 2229 | Organism (ID 16373): Escherichia coli O9a:K30 Full structure (ID 35803): | |
| Enzyme name: WclR UniProt ID: B5T072* CAZy family: GT4 | Synthesized dimer: aDGalp(1-3)bDGlcpN Donor (ID 35273): ?DGalp(1-P-P-5)xXnucU Status: suggested
Confirmation methods: based on the structure found in vivo ID: 2230 Notes: Repeating unit of the O3 antigen. | Organism (ID 2446): Escherichia coli O3 Full structure (ID 4178): CSDB ID(s): 1501, 2213, 10304, 11291, 12189, 20634, 22724, 124553 Molecule role: O-antigen | Chen et al. 2016 DOI: 10.1016/j.carres.2016.04.012 |
| Synthesized dimer: aDGalp(1-3)aDGlcpN Donor (ID 35273): ?DGalp(1-P-P-5)xXnucU Acceptor (ID 35625): Ac(1-2)aDGlcpN(1-P-P-1)Dec Status: evidence in vitro
Confirmation methods: in vitro (purified protein) ID: 2231 | Organism (ID 2446): Escherichia coli O3 Full structure (ID 35804): Molecule role (analog of): O-antigen | ||
| Enzyme name: WbdC UniProt ID: O66224* CAZy family: GT4 | Synthesized dimer: aDManp(1-3)bDGlcpN Donor (ID 35793): ?DManp(1-P-P-5)xXnucG Status: evidence in vitro
Confirmation methods: in vitro (membrane preparations) ID: 2232 Notes: An endogeneous acceptor was used. | Organism (ID 16374): Escherichia coli O9a CWG634 Full structure (ID 35805): Molecule role (analog of): O-antigen | Greenfield et al. 2012a DOI: 10.1074/jbc.M112.401000 |
| Synthesized dimer: aDManp(1-3)bDGlcpN Donor (ID 35793): ?DManp(1-P-P-5)xXnucG Acceptor (ID 35806): Ac(1-2)bDGlcpN(1-P-P-1)Subst // Subst = C13 lipid analog Status: evidence in vitro
Confirmation methods: in vitro (purified protein), mutation, complementation ID: 2233 | Organism (ID 16374): Escherichia coli O9a CWG634 Full structure (ID 35807): Molecule role (analog of): O-antigen | ||
| Synthesized dimer: aDManp(1-3)bDGlcpN Donor (ID 35793): ?DManp(1-P-P-5)xXnucG Acceptor (ID 35806): Ac(1-2)bDGlcpN(1-P-P-1)Subst // Subst = C13 lipid analog Status: evidence in vitro
Confirmation methods: in vitro (purified protein), mutation, complementation ID: 2234 | Organism (ID 16375): Escherichia coli O8 CWG636 Full structure (ID 35807): Molecule role (analog of): O-antigen | ||
| Enzyme name: WbdB UniProt ID: A0A0J1XH27* | Synthesized dimer: aDManp(1-3)aDManp Donor (ID 35793): ?DManp(1-P-P-5)xXnucG Acceptor (ID 35808): aDManp(1-3)[Ac(1-2)]bDGlcpN(1-P-P-1)Subst // Subst = C13 lipid analog Status: evidence in vitro
Confirmation methods: in vitro (purified protein), mutation, complementation ID: 2235 Notes: WbdB adds 2 Man (or more in vitro) to aDManp(1-3)[Ac(1-2)]bDGlcpN(1-P-P-1)Subst // Subst = C13 lipid analog synthesized by WbdC. | Organism (ID 16374): Escherichia coli O9a CWG634 Full structure (ID 35809): Molecule role (analog of): O-antigen | |
| Synthesized dimer: aDManp(1-3)aDManp Donor (ID 35793): ?DManp(1-P-P-5)xXnucG Acceptor (ID 35810): aDManp(1-3)aDManp(1-3)[Ac(1-2)]bDGlcpN(1-P-P-1)Subst // Subst = C13 lipid analog Status: evidence in vitro
Confirmation methods: in vitro (purified protein), mutation, complementation ID: 2236 Notes: WbdB adds 2 Man (or more in vitro) to aDManp(1-3)[Ac(1-2)]bDGlcpN(1-P-P-1)Subst // Subst = C13 lipid analog synthesized by WbdC. | Organism (ID 16374): Escherichia coli O9a CWG634 Full structure (ID 35811): Molecule role (analog of): O-antigen | ||
| Enzyme name: WbdA / MtfA UniProt ID: Q9LC67* CAZy family: GT4 | Synthesized dimer: aDManp(1-?)aDManp Donor (ID 35793): ?DManp(1-P-P-5)xXnucG Acceptor (ID 35812): aDManp(1-2)aDManp(1-2)aDManp(1-3)aDManp Status: evidence in vitro
Confirmation methods: in vitro (purified protein) ID: 2237 Notes: The largest product (m/z 4911) corresponded to the mass of the acceptor plus 23 Manp residues. | Organism (ID 16374): Escherichia coli O9a CWG634 Exact full structure is unknown Molecule role (analog of): O-antigen | |
| Synthesized dimer: aDManp(1-2)aDManp Donor (ID 35793): ?DManp(1-P-P-5)xXnucG Acceptor (ID 35814): aDManp(1-3)aDManp(1-3)[Ac(1-2)]bDGlcpN Status: evidence in vitro
Confirmation methods: in vitro (purified protein) ID: 2238 Notes: WbdA(O9a) is a bifunctional (a,1->12), (a,1->3) mannosyltransferase. | Organism (ID 16374): Escherichia coli O9a CWG634 Full structure (ID 35815): Molecule role (analog of): O-antigen | Greenfield et al. 2012a DOI: 10.1074/jbc.M112.401000 Greenfield et al. 2012b DOI: 10.1074/jbc.M112.412577 | |
| Synthesized dimer: aDManp(1-2)aDManp Donor (ID 35793): ?DManp(1-P-P-5)xXnucG Acceptor (ID 35816): aDManp(1-2)aDManp(1-3)aDManp(1-3)[Ac(1-2)]bDGlcpN Status: evidence in vitro
Confirmation methods: in vitro (purified protein) ID: 2239 Notes: WbdA(O9a) is a bifunctional (a,1->12), (a,1->3) mannosyltransferase. | Organism (ID 16374): Escherichia coli O9a CWG634 Full structure (ID 35817): Molecule role (analog of): O-antigen | ||
| Synthesized dimer: aDManp(1-3)aDManp Donor (ID 35793): ?DManp(1-P-P-5)xXnucG Acceptor (ID 35818): aDManp(1-2)aDManp(1-2)aDManp(1-3)aDManp(1-3)[Ac(1-2)]bDGlcpN Status: evidence in vitro
Confirmation methods: in vitro (purified protein), mutation (in recombinant protein) ID: 2240 Notes: WbdA(O9a) is a bifunctional (a,1->12), (a,1->3) mannosyltransferase. | Organism (ID 16374): Escherichia coli O9a CWG634 Full structure (ID 35819): Molecule role (analog of): O-antigen | Greenfield et al. 2012a DOI: 10.1074/jbc.M112.401000 Greenfield et al. 2012b DOI: 10.1074/jbc.M112.412577 Liston et al. 2015 DOI: 10.1074/jbc.M114.622480 | |
| Synthesized dimer: aDManp(1-3)aDManp Donor (ID 35793): ?DManp(1-P-P-5)xXnucG Acceptor (ID 35818): aDManp(1-2)aDManp(1-2)aDManp(1-3)aDManp(1-3)[Ac(1-2)]bDGlcpN Status: direct evidence in vivo
Confirmation methods: in vitro (purified protein), mutation, complementation ID: 2241 Notes: Repeating unit of the O9a antigen. | Organism (ID 16374): Escherichia coli O9a CWG634 Full structure (ID 982): CSDB ID(s): 884, 1511, 5883, 7236, 7528, 10713, 12090, 20623, 23433, 26882, 27164, 27165, 27225, 28354, 30080, 30630, 101047, 108708, 114960 Molecule role: O-antigen | Greenfield et al. 2012a DOI: 10.1074/jbc.M112.401000 Greenfield et al. 2012b DOI: 10.1074/jbc.M112.412577 Liston et al. 2015 DOI: 10.1074/jbc.M114.622480 Kido et al. 1998 DOI: 10.1046/j.1365-2958.1998.00765.x Kido et al. 2000 King et al. 2014 DOI: 10.1073/pnas.1400814111 | |
| Synthesized dimer: aDManp(1-2)aDManp Donor (ID 35793): ?DManp(1-P-P-5)xXnucG Acceptor (ID 35818): aDManp(1-2)aDManp(1-2)aDManp(1-3)aDManp(1-3)[Ac(1-2)]bDGlcpN Status: direct evidence in vivo
Confirmation methods: in vitro (purified protein), mutation, complementation, reverse mutation ID: 2242 Notes: Repeating unit of the O9a antigen. | Organism (ID 16374): Escherichia coli O9a CWG634 Full structure (ID 982): CSDB ID(s): 884, 1511, 5883, 7236, 7528, 10713, 12090, 20623, 23433, 26882, 27164, 27165, 27225, 28354, 30080, 30630, 101047, 108708, 114960 Molecule role: O-antigen | ||
| Synthesized dimer: aDManp(1-2)aDManp Donor (ID 35793): ?DManp(1-P-P-5)xXnucG Acceptor (ID 35812): aDManp(1-2)aDManp(1-2)aDManp(1-3)aDManp Status: direct evidence in vivo
Confirmation methods: in vitro (purified protein), mutation, complementation ID: 2243 Notes: Repeating unit of the O8 antigen. WbdA(O8) is a trifunctional enzyme with (a,1->2), (a,1->3), and (b,1->2) mannosyltransferase activities. | Organism (ID 16375): Escherichia coli O8 CWG636 Full structure (ID 25): CSDB ID(s): 182, 267, 1509, 1712, 5183, 5764, 10714, 10884, 12488, 20220, 26334, 27166, 27531, 28347, 28352, 31567, 101045, 108705, 114536, 116159, 126012, 131838 Molecule role: O-antigen | Greenfield et al. 2012a DOI: 10.1074/jbc.M112.401000 Greenfield et al. 2012b DOI: 10.1074/jbc.M112.412577 | |
| Synthesized dimer: aDManp(1-3)bDManp Donor (ID 35793): ?DManp(1-P-P-5)xXnucG Acceptor (ID 35812): aDManp(1-2)aDManp(1-2)aDManp(1-3)aDManp Status: direct evidence in vivo
Confirmation methods: in vitro (purified protein), mutation, complementationfied protein) ID: 2244 Notes: Repeating unit of the O8 antigen. | Organism (ID 16375): Escherichia coli O8 CWG636 Full structure (ID 25): CSDB ID(s): 182, 267, 1509, 1712, 5183, 5764, 10714, 10884, 12488, 20220, 26334, 27166, 27531, 28347, 28352, 31567, 101045, 108705, 114536, 116159, 126012, 131838 Molecule role: O-antigen | ||
| Synthesized dimer: bDManp(1-2)aDManp Donor (ID 35793): ?DManp(1-P-P-5)xXnucG Acceptor (ID 35812): aDManp(1-2)aDManp(1-2)aDManp(1-3)aDManp Status: direct evidence in vivo
Confirmation methods: in vitro (purified protein), mutation, complementation ID: 2245 Notes: Repeating unit of the O8 antigen. | Organism (ID 16375): Escherichia coli O8 CWG636 Full structure (ID 25): CSDB ID(s): 182, 267, 1509, 1712, 5183, 5764, 10714, 10884, 12488, 20220, 26334, 27166, 27531, 28347, 28352, 31567, 101045, 108705, 114536, 116159, 126012, 131838 Molecule role: O-antigen | ||
| Synthesized dimer: aDManp(1-?)aDManp Donor (ID 35793): ?DManp(1-P-P-5)xXnucG Status: evidence in vitro
Confirmation methods: in vitro (membrane preparations) ID: 2246 | Organism (ID 16376): Escherichia coli O9 F719 Exact full structure is unknown Molecule role: O-antigen | Kido et al. 1995 | |
| Synthesized dimer: aDManp(1-3)aDManp Donor (ID 35793): ?DManp(1-P-P-5)xXnucG Status: indirect evidence in vivo
Confirmation methods: mutation, reverse mutation ID: 2247 Notes: Repeating unit of the O9 antigen. | Organism (ID 553): Escherichia coli O9 Full structure (ID 656): CSDB ID(s): 858, 883, 1510, 5762, 5882, 6090, 7199, 7401, 10527, 11238, 11687, 12092, 20624, 21442, 22487, 23268, 27529, 28348, 28351, 28353, 28437, 28665, 101048, 108707, 122425, 143574 Molecule role: O-antigen | Kido et al. 2000 Kido et al. 1995 | |
| Enzyme name: WbuB UniProt ID: B6A8T8* CAZy family: GT4 Gene name: wbuB / wbfG | Synthesized dimer: aLFucpN(1-3)aDGlcpN Status: predicted in silico
Confirmation methods: in silico ID: 2248 | Organism (ID 949): Escherichia coli O172 Full structure (ID 1505): CSDB ID(s): 1914, 3112, 8981, 20708, 21747, 21772 Molecule role: O-antigen | Guo et al. 2004 DOI: 10.1111/j.1365-2672.2004.02305.x |
| Synthesized dimer: aLFucpN(1-3)bDGlcpN Status: predicted in silico
Confirmation methods: in silico ID: 2249 | Organism (ID 8173): Escherichia coli O12 Full structure (ID 12259): CSDB ID(s): 1514, 3833, 11552 Molecule role: O-antigen | Senchenkova et al. 2016a DOI: 10.1134/S0006297916040106 | |
| Enzyme name: WcnU UniProt ID: E2DNQ4* | Synthesized dimer: aPse(2-6)bDGalp Status: predicted in silico
Confirmation methods: in silico ID: 2250 | Organism (ID 6958): Escherichia coli O165 Full structure (ID 35820): Molecule role: O-antigen | Senchenkova et al. 2016b DOI: 10.1093/glycob/cwv106 |
| Enzyme name: WcnV UniProt ID: E2DNQ6* CAZy family: GT2 | Synthesized dimer: bDGalp(1-4)bDGlcp Status: predicted in silico
Confirmation methods: in silico ID: 2251 | Organism (ID 6958): Escherichia coli O165 Full structure (ID 35820): Molecule role: O-antigen | |
| Enzyme name: WcnW UniProt ID: E2DNQ7* CAZy family: GT2 | Synthesized dimer: bDGlcp(1-3)aDGlcpN Status: predicted in silico
Confirmation methods: in silico ID: 2252 | Organism (ID 6958): Escherichia coli O165 Full structure (ID 35820): Molecule role: O-antigen | |
| Enzyme name: WcnY* UniProt ID: D6BV48* CAZy family: GT2 | Synthesized dimer: aLRhap(1-2)aLRhap Status: predicted in silico
Confirmation methods: in silico ID: 2253 | Organism (ID 8200): Escherichia coli O133 Full structure (ID 12255): CSDB ID(s): 1875, 11239 Molecule role: O-antigen | Shashkov et al. 2016a DOI: 10.1016/j.carres.2016.04.028 |
| Synthesized dimer: aLRhap(1-2)aLRhap Status: predicted in silico
Confirmation methods: in silico ID: 2254 | Organism (ID 8200): Escherichia coli O133 Full structure (ID 12255): CSDB ID(s): 1875, 11239 Molecule role: O-antigen | ||
| Synthesized dimer: aLRhap(1-4)aDGalpA Status: predicted in silico
Confirmation methods: in silico ID: 2255 | Organism (ID 8200): Escherichia coli O133 Full structure (ID 12255): CSDB ID(s): 1875, 11239 Molecule role: O-antigen | ||
| Enzyme name: WcmT* UniProt ID: E2DNP7* CAZy family: GT4 | Synthesized dimer: aDGalpA(1-3)aDGlcpN Status: predicted in silico
Confirmation methods: in silico ID: 2256 | Organism (ID 8200): Escherichia coli O133 Full structure (ID 12255): CSDB ID(s): 1875, 11239 Molecule role: O-antigen | |
| Enzyme name: WegG UniProt ID: E2DNK7* Gene name: wegG Gene cluster ID: GU068041 | Synthesized dimer: bLRhap(1-4)bDGlcpN Status: predicted in silico
Confirmation methods: in silico ID: 2257 | Organism (ID 5721): Escherichia coli O115 Full structure (ID 11158): CSDB ID(s): 29971 Molecule role: O-antigen | Fontana et al. 2013 DOI: 10.1093/glycob/cws161 |
| Enzyme name: WegL Group: WffE UniProt ID: E2DNL4* CAZy family: GT4 Gene name: wegL Gene cluster ID: GU068041 | Synthesized dimer: aDManp(1-3)bDGlcpN Status: predicted in silico
Confirmation methods: in silico ID: 2258 | Organism (ID 5721): Escherichia coli O115 Full structure (ID 11158): CSDB ID(s): 29971 Molecule role: O-antigen | |
| Enzyme name: WfbF* UniProt ID: A3E2E4* CAZy family: GT4 | Synthesized dimer: aDGlcpN(1-3)aLFucpN Status: predicted in silico
Confirmation methods: in silico ID: 2259 | Organism (ID 8173): Escherichia coli O12 Full structure (ID 12259): CSDB ID(s): 1514, 3833, 11552 Molecule role: O-antigen | Senchenkova et al. 2016a DOI: 10.1134/S0006297916040106 |
| Enzyme name: WfeQ* UniProt ID: B5L452* CAZy family: GT2 | Synthesized dimer: bDGlcp(1-6)aDGlcpN Status: predicted in silico
Confirmation methods: in silico ID: 2260 | Organism (ID 8173): Escherichia coli O12 Full structure (ID 12259): CSDB ID(s): 1514, 3833, 11552 Molecule role: O-antigen | |
| Enzyme name: WfcD UniProt ID: A6MF03* CAZy family: GT4 | Synthesized dimer: aDManp(1-3)aDGlcpN Donor (ID 35793): ?DManp(1-P-P-5)xXnucG Acceptor (ID 35625): Ac(1-2)aDGlcpN(1-P-P-1)Dec Status: evidence in vitro
Confirmation methods: in vitro (crude extract) ID: 2261 | Organism (ID 149): Escherichia coli O141 Full structure (ID 12533): CSDB ID(s): 12067 Molecule role: O-antigen | Chen et al. 2017 DOI: 10.1016/j.carres.2017.04.003 |
| Synthesized dimer: aDManp(1-3)aDGlcpN Donor (ID 35793): ?DManp(1-P-P-5)xXnucG Acceptor (ID 35821): Ac(1-2)aDGlcpN(1-P-P-1)Subst // Subst = 11-(anthracen-9-ylmethoxy)undecan-1-diol Status: evidence in vitro
Confirmation methods: in vitro (crude extract) ID: 2262 | Organism (ID 149): Escherichia coli O141 Full structure (ID 35822): Molecule role: O-antigen | ||
| Enzyme name: WzY UniProt ID: P27835* | Synthesized dimer: aDGalpN(1-2)aDGalp Donor (ID 35823): aLFucp(1-2)[aDGalp(1-3)]bDGalp(1-3)[Ac(1-2)]aDGalpN(1-3)[Ac(1-2)]aDGalpN(1-P-P-1)Subst // Subst = 3,7,11,15,19,23,27,31,35,39,43-undecamethyl-tetratetraconta-2Z,6Z,10Z,14Z,18Z,22Z,26Z,30Z,34E,38E,42-undecaen-1-ol Acceptor (ID 35823): aLFucp(1-2)[aDGalp(1-3)]bDGalp(1-3)[Ac(1-2)]aDGalpN(1-3)[Ac(1-2)]aDGalpN(1-P-P-1)Subst // Subst = 3,7,11,15,19,23,27,31,35,39,43-undecamethyl-tetratetraconta-2Z,6Z,10Z,14Z,18Z,22Z,26Z,30Z,34E,38E,42-undecaen-1-ol Status: evidence in vitro
Confirmation methods: in vitro (purified protein) ID: 2263 Notes: Wzy acts as an O-antigen polymerase. An exemplary structure is shown. | Organism (ID 2516): Escherichia coli O86:B7 Full structure (ID 35824): Molecule role: O-antigen | Woodward et al. 2010 DOI: 10.1038/nchembio.351 |
| Synthesized dimer: aDGalpN(1-2)aDGalp Donor (ID 35825): aLFucp(1-2)[aDGalp(1-3)]bDGalp(1-3)[Ac(1-2)]aDGalpN(1-3)[Ac(1-2)]aDGalpN(1-P-P-1)Subst // Subst = heptaprenol (4cis, 2trans) Acceptor (ID 35825): aLFucp(1-2)[aDGalp(1-3)]bDGalp(1-3)[Ac(1-2)]aDGalpN(1-3)[Ac(1-2)]aDGalpN(1-P-P-1)Subst // Subst = heptaprenol (4cis, 2trans) Status: evidence in vitro
Confirmation methods: in vitro (purified protein) ID: 2264 Notes: Wzy acts as an O-antigen polymerase. An exemplary structure is shown. | Organism (ID 2516): Escherichia coli O86:B7 Full structure (ID 35826): Molecule role: O-antigen | ||
| Synthesized dimer: aDGalpN(1-2)aDGalp Donor (ID 35827): aLFucp(1-2)[aDGalp(1-3)]bDGalp(1-3)[Ac(1-2)]aDGalpN(1-3)[Ac(1-2)]aDGalpN(1-P-P-1)Subst // Subst = pentaprenol (2cis, 2trans) Acceptor (ID 35827): aLFucp(1-2)[aDGalp(1-3)]bDGalp(1-3)[Ac(1-2)]aDGalpN(1-3)[Ac(1-2)]aDGalpN(1-P-P-1)Subst // Subst = pentaprenol (2cis, 2trans) Status: evidence in vitro
Confirmation methods: in vitro (purified protein) ID: 2265 Notes: Wzy acts as an O-antigen polymerase. An exemplary structure is shown. | Organism (ID 2516): Escherichia coli O86:B7 Full structure (ID 35828): Molecule role: O-antigen | ||
| Synthesized dimer: aDGalpN(1-2)aDGalp Donor (ID 35829): aLFucp(1-2)[aDGalp(1-3)]bDGalp(1-3)[Ac(1-2)]aDGalpN(1-3)[Ac(1-2)]aDGalpN(1-P-P-1)Subst // Subst = cis-pentaprenol (4cis, 0trans) Acceptor (ID 35829): aLFucp(1-2)[aDGalp(1-3)]bDGalp(1-3)[Ac(1-2)]aDGalpN(1-3)[Ac(1-2)]aDGalpN(1-P-P-1)Subst // Subst = cis-pentaprenol (4cis, 0trans) Status: evidence in vitro
Confirmation methods: in vitro (purified protein) ID: 2266 Notes: Wzy acts as an O-antigen polymerase. An exemplary structure is shown. | Organism (ID 2516): Escherichia coli O86:B7 Full structure (ID 35830): Molecule role: O-antigen | ||
| Synthesized dimer: aDGlcpN(1-3)aLFucpN Status: predicted in silico
Confirmation methods: in silico ID: 2267 Notes: Wzy acts as an O-antigen polymerase. | Organism (ID 949): Escherichia coli O172 Full structure (ID 1505): CSDB ID(s): 1914, 3112, 8981, 20708, 21747, 21772 Molecule role: O-antigen | Guo et al. 2004 DOI: 10.1111/j.1365-2672.2004.02305.x | |
| Synthesized dimer: bDGalpN(1-4)aLFucp Status: predicted in silico
Confirmation methods: in silico ID: 2268 Notes: Wzy acts as an O-antigen polymerase. | Organism (ID 2487): Escherichia coli O86 Full structure (ID 4253): CSDB ID(s): 1439, 1592, 10035, 10548, 20043, 20120, 20508, 20667, 25273, 30366, 108706, 115586 Molecule role: O-antigen | Feng et al. 2005a DOI: 10.1016/j.vetmic.2004.12.021 | |
| Synthesized dimer: bDGlcpN(1-2)aDGlcpA Status: predicted in silico
Confirmation methods: in silico ID: 2269 Notes: Wzy acts as an O-antigen polymerase. | Organism (ID 8192): Escherichia coli O96 Full structure (ID 12251): CSDB ID(s): 1600, 11236 Molecule role: O-antigen | Guo et al. 2016 DOI: 10.1016/j.carres.2015.11.005 | |
| Synthesized dimer: aDGalpN(1-4)aDGalpA Status: predicted in silico
Confirmation methods: in silico ID: 2270 Notes: Wzy acts as an O-antigen polymerase. | Organism (ID 1715): Escherichia coli O113 Full structure (ID 35831): Molecule role: O-antigen | Paton et al. 1999 | |
| Synthesized dimer: bDGalpN(1-3)aDGalp Status: predicted in silico
Confirmation methods: in silico ID: 2271 Notes: Wzy acts as an O-antigen polymerase. | Organism (ID 7116): Escherichia coli O169 Full structure (ID 13043): CSDB ID(s): 1911, 11567, 12641, 30654 Molecule role: O-antigen | Perepelov et al. 2015a DOI: 10.1016/j.carres.2015.05.016 | |
| Synthesized dimer: bDGlcpN(1-6)aDGlcpN Status: predicted in silico
Confirmation methods: in silico ID: 2272 Notes: Wzy acts as an O-antigen polymerase. | Organism (ID 8202): Escherichia coli O137 Full structure (ID 12256): CSDB ID(s): 1879, 11240 Molecule role: O-antigen | Perepelov et al. 2016 DOI: 10.1016/j.carres.2016.01.002 | |
| Synthesized dimer: aDGalpN(1-2)aDRhap4N Status: predicted in silico
Confirmation methods: in silico ID: 2273 Notes: Wzy acts as an O-antigen polymerase. | Organism (ID 584): Escherichia coli O157 Full structure (ID 34): CSDB ID(s): 695, 1170, 1619, 1898, 3312, 3776, 3909, 7417, 8630, 8701, 8988, 12944, 20690, 21404, 25635, 27158, 27338, 27347, 27497, 29975, 30358, 31485, 31911, 105778, 108622, 108677, 130570 Molecule role: O-antigen | Samuel et al. 2004 DOI: 10.1128/JB.186.19.6536-6543.2004 | |
| Synthesized dimer: bDGlcpN(1-3)aDGalp Status: predicted in silico
Confirmation methods: in silico ID: 2274 Notes: Wzy acts as an O-antigen polymerase. | Organism (ID 446): Escherichia coli O55 Full structure (ID 799): CSDB ID(s): 1562, 2218, 2369, 5554, 7239, 12676, 13080, 20658, 24242, 27445, 28398, 30374, 108629, 113595 Molecule role: O-antigen | Wang et al. 2002 DOI: 10.1128/JB.184.10.2620-2625.2002 Samuel et al. 2004 DOI: 10.1128/JB.186.19.6536-6543.2004 | |
| Synthesized dimer: bDGlcpN(1-2)bDGlcp Status: predicted in silico
Confirmation methods: in silico ID: 2275 Notes: Wzy acts as an O-antigen polymerase. | Organism (ID 8173): Escherichia coli O12 Full structure (ID 12259): CSDB ID(s): 1514, 3833, 11552 Molecule role: O-antigen | Senchenkova et al. 2016a DOI: 10.1134/S0006297916040106 | |
| Synthesized dimer: aDGlcpN(1-8)aPse Status: predicted in silico
Confirmation methods: in silico ID: 2276 Notes: Wzy acts as an O-antigen polymerase. | Organism (ID 6958): Escherichia coli O165 Full structure (ID 35820): Molecule role: O-antigen | Senchenkova et al. 2016b DOI: 10.1093/glycob/cwv106 | |
| Synthesized dimer: aDGlcpN(1-3)aLRhap Status: predicted in silico
Confirmation methods: in silico ID: 2277 Notes: Wzy acts as an O-antigen polymerase. | Organism (ID 8200): Escherichia coli O133 Full structure (ID 12255): CSDB ID(s): 1875, 11239 Molecule role: O-antigen | Shashkov et al. 2016a DOI: 10.1016/j.carres.2016.04.028 | |
| Synthesized dimer: aDGlcpN(1-3)bDGlcp Status: predicted in silico
Confirmation methods: in silico ID: 2278 Notes: Wzy acts as an O-antigen polymerase. | Organism (ID 8101): Escherichia coli O28ab Full structure (ID 13816): CSDB ID(s): 736, 1403, 1536, 11253 Molecule role: O-antigen | Shashkov et al. 2016b DOI: 10.1016/j.carres.2016.03.011 | |
| Synthesized dimer: bDGalpN(1-4)bDGalpN Status: predicted in silico
Confirmation methods: in silico ID: 2279 Notes: Wzy acts as an O-antigen polymerase. | Organism (ID 8179): Escherichia coli O37 Full structure (ID 12288): CSDB ID(s): 1544, 3837, 11591 Molecule role: O-antigen | ||
| Synthesized dimer: bDGlcpN(1-2)aLRhap Status: predicted in silico
Confirmation methods: in silico ID: 2280 Notes: Wzy acts as an O-antigen polymerase. | Organism (ID 3427): Escherichia coli O100 Full structure (ID 12289): CSDB ID(s): 1838, 11592 Molecule role: O-antigen | ||
| Synthesized dimer: bDGalpN(1-4)aDGalp Status: predicted in silico
Confirmation methods: in silico ID: 2281 Notes: Wzy acts as an O-antigen polymerase. | Organism (ID 851): Escherichia coli O104 Full structure (ID 35653): Molecule role: O-antigen | Wang et al. 2001 DOI: 10.1016/S0378-1119(01)00471-1 | |
| Synthesized dimer: aDGlcpN(1-6)aDManp Status: predicted in silico
Confirmation methods: in silico ID: 2282 Notes: Wzy acts as an O-antigen polymerase. | Organism (ID 1918): Escherichia coli O77 Full structure (ID 3446): CSDB ID(s): 359, 1583, 2675, 5925, 11268, 12791, 20665, 21421, 25629, 27423, 30340, 105802, 105825, 108621 Molecule role: O-antigen | Wang et al. 2007 DOI: 10.1099/mic.0.2007/004192-0 | |
| Synthesized dimer: aDGalpN(1-4)bDGalpN Status: predicted in silico
Confirmation methods: in silico ID: 2283 Notes: Wzy acts as an O-antigen polymerase. | Organism (ID 6228): Escherichia coli O107 H705 Full structure (ID 14742): CSDB ID(s): 1846, 5056, 23872, 27352 Molecule role: O-antigen | Wang et al. 2009 DOI: 10.1111/j.1574-695X.2008.00494.x | |
| Synthesized dimer: aDGalpN(1-4)bDGalpN Status: predicted in silico
Confirmation methods: in silico ID: 2284 Notes: Wzy acts as an O-antigen polymerase. | Organism (ID 6229): Escherichia coli O117 W30 Full structure (ID 2704): CSDB ID(s): 1857, 3145, 20704, 21517, 24256, 28683, 32135 Molecule role: O-antigen | ||
| Synthesized dimer: aDGlcpN(1-3)bDQuip4N Status: predicted in silico
Confirmation methods: in silico ID: 2285 Notes: Wzy acts as an O-antigen polymerase. | Organism (ID 16361): Escherichia coli O7:K1 VW187 Full structure (ID 274): CSDB ID(s): 1385, 1508, 2162, 2719, 7494, 10463, 10610, 10871, 11786, 20641, 23054, 29648, 30268, 108701, 114155, 116994 Molecule role: O-antigen | Marolda et al. 1999 DOI: 10.1099/00221287-145-9-2485 | |
| Enzyme name: AAH Enzyme GenBank ID: CAC43407.1 UniProt ID: Q93K96 | Synthesized dimer: HEP(1-3)Ser Status: indirect evidence in vivo
Confirmation methods: mutation (deletion), overexpression ID: 2286 Notes: AAH glycosylates AIDA-I (adhesin involved in diffuse adherence) by adding up to 19 heprose residues, in particular, at S102 and Thr154. Another target of AAH is Ag43. | Organism (ID 16377): Escherichia coli O126:H27 2787 Exact full structure is unknown Molecule role (analog of): peptidoglycan | Benz et al. 2001 DOI: 10.1046/j.1365-2958.2001.02487.x Charbonneau et al. 2007 DOI: 10.1128/JB.00969-0 Charbonneau et al. 2008 DOI: 10.1016/j.resmic.2008.06.009 Charbonneau et al. 2012 DOI: 10.1111/j.1365-2958.2012.07973.x Sherlock et al. 2006 DOI: 10.1128/JB.188.5.1798-1807.2006 |
| Synthesized dimer: HEP(1-3)Ser Status: indirect evidence in vivo
Confirmation methods: mutation (deletion), overexpression ID: 2287 Notes: AAH glycosylates AIDA-I (adhesin involved in diffuse adherence) by adding up to 19 heprose residues, in particular, at S102 and Thr154. Another target of AAH is Ag43. | Organism (ID 16378): Escherichia coli K12 C600 Exact full structure is unknown Molecule role (analog of): peptidoglycan | ||
| Synthesized dimer: HEP(1-3)Thr Status: indirect evidence in vivo
Confirmation methods: mutation (deletion), overexpression ID: 2288 Notes: AAH glycosylates AIDA-I (adhesin involved in diffuse adherence) by adding up to 19 heprose residues, in particular, at S102 and Thr154. Another target of AAH is Ag43. | Organism (ID 16377): Escherichia coli O126:H27 2787 Exact full structure is unknown Molecule role (analog of): peptidoglycan | ||
| Synthesized dimer: HEP(1-3)Thr Status: indirect evidence in vivo
Confirmation methods: mutation (deletion), overexpression ID: 2289 Notes: AAH glycosylates AIDA-I (adhesin involved in diffuse adherence) by adding up to 19 heprose residues, in particular, at S102 and Thr154. Another target of AAH is Ag43. | Organism (ID 16378): Escherichia coli K12 C600 Exact full structure is unknown Molecule role (analog of): peptidoglycan | ||
| Enzyme name: TibC UniProt ID: Q9S4K6* Gene cluster ID: NC_017633.1 | Synthesized dimer: HEP(1-3)Ser Status: indirect evidence in vivo
Confirmation methods: overexpression, mutation ID: 2290 Notes: TibC can glycosylate AIDA-I (adhesin involved in diffuse adherence), TibA and Ag43. | Organism (ID 16379): Escherichia coli ETEC H10407 Exact full structure is unknown Molecule role (analog of): peptidoglycan | Sherlock et al. 2006 DOI: 10.1128/JB.188.5.1798-1807.2006 Moormann et al. 2002 DOI: 10.1128/IAI.70.5.2264-2270.2002 Yao et al. 2014 DOI: 10.7554/eLife.03714 |
| Synthesized dimer: HEP(1-3)Thr Status: indirect evidence in vivo
Confirmation methods: overexpression, mutation ID: 2291 Notes: TibC can glycosylate AIDA-I (adhesin involved in diffuse adherence), TibA and Ag43. | Organism (ID 16379): Escherichia coli ETEC H10407 Exact full structure is unknown Molecule role (analog of): peptidoglycan | ||
| Synthesized dimer: DDmanHepp(1-3)Ser Donor (ID 35834): bXDDmanHepp(1-P-P-5)xXnucA Acceptor (ID 35835): x?Leu(1-2)x?Ser(1-2)xXGly(1-2)xXGly(1-2)x?Thr(1-2)x?Gln(1-2)x?Asn(1-2)x?Val(1-2)x?Ser(1-2)x?Ser(1-2)xXGly(1-2)xXGly(1-2)x?Ser(1-2)x?Ala?(1-2)x?Ile(1-2)x?Ser(1-2)x?Thr(1-2)x?Ser(1-2)x?Val Status: evidence in vitro
Confirmation methods: in vitro (purified protein) ID: 2292 Notes: The acceptor peptide is derived from the passenger domain of AIDA-I. | Organism (ID 20): Escherichia coli Full structure (ID 35836): Molecule role (analog of): peptidoglycan | Yao et al. 2014 DOI: 10.7554/eLife.03714 | |
| Synthesized dimer: DDmanHepp(1-3)Thr Donor (ID 35834): bXDDmanHepp(1-P-P-5)xXnucA Acceptor (ID 35835): x?Leu(1-2)x?Ser(1-2)xXGly(1-2)xXGly(1-2)x?Thr(1-2)x?Gln(1-2)x?Asn(1-2)x?Val(1-2)x?Ser(1-2)x?Ser(1-2)xXGly(1-2)xXGly(1-2)x?Ser(1-2)x?Ala?(1-2)x?Ile(1-2)x?Ser(1-2)x?Thr(1-2)x?Ser(1-2)x?Val Status: evidence in vitro
Confirmation methods: in vitro (purified protein) ID: 2293 Notes: The acceptor peptide is derived from the passenger domain of AIDA-I. | Organism (ID 20): Escherichia coli Full structure (ID 35836): Molecule role (analog of): peptidoglycan | ||
| Synthesized dimer: DDmanHepp(1-3)Ser Donor (ID 35834): bXDDmanHepp(1-P-P-5)xXnucA Acceptor (ID 35837): xXGly(1-2)xXGly(1-2)x?Val(1-2)x?Gln(1-2)x?His(1-2)x?Val(1-2)x?Ser(1-2)x?Ser(1-2)xXGly(1-2)xXGly(1-2)x?Ser(1-2)x?Ala?(1-2)x?Thr(1-2)x?Ser(1-2)x?Ser(1-2)x?Thr(1-2)x?Ile(1-2)x?Asn(1-2)x?Ser(1-2)xXGly(1-2)xXGly Status: evidence in vitro
Confirmation methods: in vitro (purified protein) ID: 2294 Notes: The acceptor peptide is derived from the passenger domain of TibA. | Organism (ID 20): Escherichia coli Full structure (ID 35838): Molecule role (analog of): peptidoglycan | ||
| Synthesized dimer: DDmanHepp(1-3)Thr Donor (ID 35834): bXDDmanHepp(1-P-P-5)xXnucA Acceptor (ID 35837): xXGly(1-2)xXGly(1-2)x?Val(1-2)x?Gln(1-2)x?His(1-2)x?Val(1-2)x?Ser(1-2)x?Ser(1-2)xXGly(1-2)xXGly(1-2)x?Ser(1-2)x?Ala?(1-2)x?Thr(1-2)x?Ser(1-2)x?Ser(1-2)x?Thr(1-2)x?Ile(1-2)x?Asn(1-2)x?Ser(1-2)xXGly(1-2)xXGly Status: evidence in vitro
Confirmation methods: in vitro (purified protein) ID: 2295 Notes: The acceptor peptide is derived from the passenger domain of TibA. | Organism (ID 20): Escherichia coli Full structure (ID 35838): Molecule role (analog of): peptidoglycan | ||
| Enzyme name: KfiA UniProt ID: Q47332* CAZy family: GT45 | Synthesized dimer: aDGlcpN(1-4)bDGlcpA Donor (ID 35041): Ac(1-2)aDGlcpN(1-P-P-5)xXnucU Acceptor (ID 35839): -4)bDGlcpA(1-4)[Ac(1-2)]aDGlcpN(1- Status: suggested
Confirmation methods: based on the structure found in vivo ID: 2296 Notes: KfiA, together with KfiC, alternatively incorporates GlcNAc and GlcA residues to the nonreducing ends of the oligo- or polysaccharides -4)bDGlcpA(1-4)[Ac(1-2)]aDGlcpN(1-. | Organism (ID 501): Escherichia coli K5 Full structure (ID 884): CSDB ID(s): 395, 762, 1095, 2404, 4902, 5890, 6270, 6569, 6676, 6889, 7122, 7490, 7491, 8005, 8902, 8931, 9233, 10417, 10573, 11247, 23633, 24809, 24810, 26123, 26222, 26283, 26386, 26387, 26900, 28740, 29189, 29362, 29818, 30682, 32170, 65169, 101033, 117746, 118190, 122543, 126836 | Chen et al. 2006 DOI: 10.1021/bi060844g |
| Synthesized dimer: aDGlcpN(1-4)bDGlcpA Donor (ID 35041): Ac(1-2)aDGlcpN(1-P-P-5)xXnucU Acceptor (ID 35840): bDGlcpA(1-4)[Ac(1-2)]aDGlcpN(1-4)bDGlcpA(1-4)[Ac(1-2)]aDGlcpN Status: evidence in vitro
Confirmation methods: in vitro (purified protein), mutation, in vitro (crude extract) ID: 2297 Notes: K5-derived oligosaccharides were used as substrate. KfiA is capable of transferring the GlcNAc residue to an acceptor as small as a disaccharide. A sample acceptor structure is shown. | Organism (ID 501): Escherichia coli K5 Full structure (ID 35841): | Chen et al. 2006 DOI: 10.1021/bi060844g Hodson et al. 2000 DOI: 10.1074/jbc.M004426200 Sigura et al. 2010 DOI: 10.1074/jbc.M109.023002 | |
| Synthesized dimer: aDGlcpN(1-4)bDGlcpA Donor (ID 35041): Ac(1-2)aDGlcpN(1-P-P-5)xXnucU Acceptor (ID 35842): bDGlcpA(1-1)Subst // Subst = SMILES O=C(CCC(NCC{1}CO)=O)NC1=CC=CC=C1C(OC)=O Status: evidence in vitro
Confirmation methods: in vitro(purified protein) ID: 2298 Notes: KfiA can use uridine 5'-diphosphate-N-acetylglucosamine (UDP-GlcNAc) and some of its C2'- and C6'-derivatives as donor substrates. | Organism (ID 501): Escherichia coli K5 Full structure (ID 35843): | Li et al. 2014 DOI: 10.1007/s00253-013-4947-1 | |
| Enzyme name: KfiC UniProt ID: Q6KCZ7* | Synthesized dimer: bDGlcpA(1-4)aDGlcpN Donor (ID 35844): aDGlcpA(1-P-P-5)xXnucU Acceptor (ID 35839): -4)bDGlcpA(1-4)[Ac(1-2)]aDGlcpN(1- Status: suggested
Confirmation methods: based on the structure found in vivo ID: 2299 Notes: KfiA, together with KfiC, alternatively incorporates GlcNAc and GlcA residues to the nonreducing ends of the oligo- or polysaccharides -4)bDGlcpA(1-4)[Ac(1-2)]aDGlcpN(1-. | Organism (ID 501): Escherichia coli K5 Full structure (ID 884): CSDB ID(s): 395, 762, 1095, 2404, 4902, 5890, 6270, 6569, 6676, 6889, 7122, 7490, 7491, 8005, 8902, 8931, 9233, 10417, 10573, 11247, 23633, 24809, 24810, 26123, 26222, 26283, 26386, 26387, 26900, 28740, 29189, 29362, 29818, 30682, 32170, 65169, 101033, 117746, 118190, 122543, 126836 | Chen et al. 2006 DOI: 10.1021/bi060844g |
| Synthesized dimer: bDGlcpA(1-4)aDGlcpN Donor (ID 35844): aDGlcpA(1-P-P-5)xXnucU Acceptor (ID 35845): Ac(1-2)aDGlcpN(1-4)bDGlcpA(1-4)[Ac(1-2)]aDGlcpN(1-4)bDGlcpA Status: evidence in vitro
Confirmation methods: mutation, in vitro (crude extract), in vitro(purified protein) ID: 2300 Notes: K5-derived oligosaccharides were used as substrate. A sample acceptor structure is shown. | Organism (ID 501): Escherichia coli K5 Full structure (ID 35846): | Sigura et al. 2010 DOI: 10.1074/jbc.M109.023002 Griffiths et al. 1998 DOI: 10.1074/jbc.273.19.11752 | |
| Enzyme name: KfoC UniProt ID: Q8L0V4* CAZy family: GT2 | Synthesized dimer: bDGalpN(1-4)bDGlcpA Donor (ID 35669): Ac(1-2)?DGalpN(1-P-P-5)xXnucU Acceptor (ID 35847): bDGlcpA(1-3)[%S-6),%S-4),Ac(1-2)]bDGalpN(1-4)bDGlcpA(1-3)[%S-6),%S-4),Ac(1-2)]bDGalpN(1-4)bDGlcpA(1-3)[%S-6),%S-4),Ac(1-2)]bDGalpN Status: evidence in vitro
Confirmation methods: in vitro(purified protein) ID: 2301 Notes: Chondroitin sulfate (hexasaccharide, sulfate position unspecified) was used as substrate. KfoC transferred GalNAc and GlcA residues alternately, and polymerized the chondroitin chain up to a molecular mass of 20 kDa when chondroitin sulfate hexasaccharide was used as an acceptor. | Organism (ID 440): Escherichia coli K4 Full structure (ID 35848): | Ninomiya et al. 2002 DOI: 10.1074/jbc.M201719200 |
| Synthesized dimer: bDGlcpA(1-3)bDGalpN Donor (ID 35444): ?DGlcpA(1-P-P-5)xXnucU Acceptor (ID 35849): Ac(1-2)[%S-6),%S-4)]bDGalpN(1-4)bDGlcpA(1-3)[%S-6),%S-4),Ac(1-2)]bDGalpN(1-4)bDGlcpA(1-3)[%S-6),%S-4),Ac(1-2)]bDGalpN(1-4)bDGlcpA(1-3)[%S-6),%S-4),Ac(1-2)]bDGalpN Status: evidence in vitro
Confirmation methods: in vitro(purified protein) ID: 2302 Notes: Chondroitin sulfate (hexasaccharide, sulfate position unspecified) was used as substrate. KfoC transferred GalNAc and GlcA residues alternately, and polymerized the chondroitin chain up to a molecular mass of 20 kDa when chondroitin sulfate hexasaccharide was used as an acceptor. | Organism (ID 440): Escherichia coli K4 Full structure (ID 35850): | ||
| Synthesized dimer: bDGalpN(1-4)bDGlcpA Donor (ID 35669): Ac(1-2)?DGalpN(1-P-P-5)xXnucU Acceptor (ID 35851): bDGlcpA(1-3)[%S-6),%S-4),Ac(1-2)]bDGalpN(1-4)bDGlcpA(1-3)[%S-6),%S-4),Ac(1-2)]bDGalpN Status: evidence in vitro
Confirmation methods: in vitro(purified protein) ID: 2303 Notes: Chondroitin sulfate (hexasaccharide, sulfate position unspecified) was used as substrate. KfoC transferred GalNAc and GlcA residues alternately, and polymerized the chondroitin chain up to a molecular mass of 20 kDa when chondroitin sulfate hexasaccharide was used as an acceptor. | Organism (ID 440): Escherichia coli K4 Full structure (ID 35852): | ||
| Synthesized dimer: bDGlcpA(1-3)bDGalpN Donor (ID 35444): ?DGlcpA(1-P-P-5)xXnucU Acceptor (ID 35853): Ac(1-2)[%S-6),%S-4)]bDGalpN(1-4)bDGlcpA(1-3)[%S-6),%S-4),Ac(1-2)]bDGalpN(1-4)bDGlcpA(1-3)[%S-6),%S-4),Ac(1-2)]bDGalpN Status: evidence in vitro
Confirmation methods: in vitro(purified protein) ID: 2304 Notes: Chondroitin sulfate (hexasaccharide, sulfate position unspecified) was used as substrate. KfoC transferred GalNAc and GlcA residues alternately, and polymerized the chondroitin chain up to a molecular mass of 20 kDa when chondroitin sulfate hexasaccharide was used as an acceptor. | Organism (ID 440): Escherichia coli K4 Exact full structure is unknown | ||
| Synthesized dimer: bDGalpN(1-4)bDGlcpA Donor (ID 35669): Ac(1-2)?DGalpN(1-P-P-5)xXnucU Acceptor (ID 35854): bDGlcpA(1-3)[Ac(1-2)]bDGalpN(1-4)bDGlcpA(1-3)[Ac(1-2)]bDGalpN(1-4)bDGlcpA(1-3)[Ac(1-2)]bDGalpN Status: evidence in vitro
Confirmation methods: in vitro(purified protein) ID: 2305 | Organism (ID 440): Escherichia coli K4 Full structure (ID 35855): | ||
| Synthesized dimer: bDGlcpA(1-3)bDGalpN Donor (ID 35444): ?DGlcpA(1-P-P-5)xXnucU Acceptor (ID 35856): Ac(1-2)bDGalpN(1-4)bDGlcpA(1-3)[Ac(1-2)]bDGalpN(1-4)bDGlcpA(1-3)[Ac(1-2)]bDGalpN(1-4)bDGlcpA(1-3)[Ac(1-2)]bDGalpN Status: evidence in vitro
Confirmation methods: in vitro(purified protein) ID: 2306 | Organism (ID 440): Escherichia coli K4 Full structure (ID 35857): | ||
| Synthesized dimer: bDGalpN(1-4)bDGlcpA Donor (ID 35669): Ac(1-2)?DGalpN(1-P-P-5)xXnucU Acceptor (ID 35858): bDGlcpA(1-3)[Ac(1-2)]bDGalpN(1-4)bDGlcpA(1-3)[Ac(1-2)]bDGalpN Status: evidence in vitro
Confirmation methods: in vitro(purified protein) ID: 2307 | Organism (ID 440): Escherichia coli K4 Full structure (ID 35859): | ||
| Synthesized dimer: bDGlcpA(1-3)bDGalpN Donor (ID 35444): ?DGlcpA(1-P-P-5)xXnucU Acceptor (ID 35860): Ac(1-2)bDGalpN(1-4)bDGlcpA(1-3)[Ac(1-2)]bDGalpN(1-4)bDGlcpA(1-3)[Ac(1-2)]bDGalpN Status: evidence in vitro
Confirmation methods: in vitro(purified protein) ID: 2308 | Organism (ID 440): Escherichia coli K4 Exact full structure is unknown | ||
| Synthesized dimer: bDGalpN(1-4)bDGlcpA Donor (ID 35669): Ac(1-2)?DGalpN(1-P-P-5)xXnucU Acceptor (ID 35861): -4)bDGlcpA(1-3)[Ac(1-2)]bDGalpN(1- Status: suggested
Confirmation methods: based on the structure found in vivo ID: 2309 Notes: KfoC is a suggested chondroitin polymerase in Escherichia coli K4. | Organism (ID 440): Escherichia coli K4 Full structure (ID 788): CSDB ID(s): 763, 2261, 2340, 5722, 5888, 6606, 6677, 6937, 8800, 9001, 9301, 10190, 12982, 28349, 29832 | ||
| Synthesized dimer: bDGlcpA(1-3)bDGalpN Donor (ID 35444): ?DGlcpA(1-P-P-5)xXnucU Acceptor (ID 35861): -4)bDGlcpA(1-3)[Ac(1-2)]bDGalpN(1- Status: suggested
Confirmation methods: based on the structure found in vivo ID: 2310 Notes: KfoC is a suggested chondroitin polymerase in Escherichia coli K4. | Organism (ID 440): Escherichia coli K4 Full structure (ID 788): CSDB ID(s): 763, 2261, 2340, 5722, 5888, 6606, 6677, 6937, 8800, 9001, 9301, 10190, 12982, 28349, 29832 | ||
| Enzyme name: KfoE UniProt ID: Q8L0V7* | Synthesized dimer: Fru(?-?)bDGlcpA Acceptor (ID 35861): -4)bDGlcpA(1-3)[Ac(1-2)]bDGalpN(1- Status: indirect evidence in vivo
Confirmation methods: mutation (knockout), complementation ID: 2311 | Organism (ID 16380): Escherichia coli O5:K4:H4 (ATCC 23502) Full structure (ID 35862): | Liu et al. 2014 DOI: 10.1007/s10529-014-1502-9 |
| Enzyme name: IroB UniProt ID: Q6Q1Q0* CAZy family: GT1 | Synthesized dimer: bD1dGlcp(1C-5)Subst // Subst = enterobactin Donor (ID 34839): ?DGlcp(1-P-P-5)xXnucU Acceptor (ID 35863): Subst // Subst = enterobactin Status: evidence in vitro
Confirmation methods: in vitro (purified protein), mutation (in recombinant protein) ID: 2312 Notes: IroB catalyzed mono-, di-, and triglucosylation of enterobactin. | Organism (ID 16381): Escherichia coli CFT073 Full structure (ID 35864): | Fischbach et al. 2005 DOI: 10.1073 pnas.0408463102 Foshag et al. 2014 DOI: 10.1016/j.bbapap.2014.06.010 |
| Synthesized dimer: bD1dGlcp(1C-5')Subst // Subst = enterobactin Donor (ID 34839): ?DGlcp(1-P-P-5)xXnucU Acceptor (ID 35865): bD1dGlcp(1C-5)Subst // Subst = enterobactin Status: evidence in vitro
Confirmation methods: in vitro (purified protein), mutation (in recombinant protein) ID: 2313 Notes: IroB catalyzed mono-, di-, and triglucosylation of enterobactin. | Organism (ID 16381): Escherichia coli CFT073 Full structure (ID 35866): | ||
| Synthesized dimer: bD1dGlcp(1C-5")Subst // Subst = enterobactin Donor (ID 34839): ?DGlcp(1-P-P-5)xXnucU Acceptor (ID 35867): bD1dGlcp(1C-5)[bD1dGlcp(1C-5')]Subst // Subst = enterobactin Status: evidence in vitro
Confirmation methods: in vitro (purified protein), mutation (in recombinant protein) ID: 2314 Notes: IroB catalyzed mono-, di-, and triglucosylation of enterobactin. | Organism (ID 16381): Escherichia coli CFT073 Full structure (ID 35868): | ||
| Enzyme name: OtsA UniProt ID: P31677* CAZy family: GT20 | Synthesized dimer: aDGlcp(1-1)aDGlcp Donor (ID 34898): aDGlcp(1-P-P-5)xXnucU Acceptor (ID 35869): P-6)?DGlcp Status: evidence in vitro
Confirmation methods: in vitro (purified protein) ID: 2315 Notes: OtsA participates in the synthesis of trehalose. | Organism (ID 663): Escherichia coli W3110 Full structure (ID 35870): | Gibson et al. 2002a DOI: 10.1107/S090744490102056X Gibson et al. 2002b DOI: 10.1016/S1074-5521(02)00292-2 |
| Enzyme name: LpxB UniProt ID: P10441* CAZy family: GT19 Gene name: lpxB Gene GenBank ID: 944838* | Synthesized dimer: bDGlcpN(1-6)aDGlcpN Donor (ID 35871): lR3HOMyr(1-2)[lR3HOMyr(1-3)]aDGlcpN(1-P-P-5)xXnucU Acceptor (ID 35872): lR3HOMyr(1-2)[lR3HOMyr(1-3)]aDGlcpN(1-P Status: evidence in vitro
Confirmation methods: in vitro (purified protein) ID: 2316 | Organism (ID 20): Escherichia coli Full structure (ID 35873): Molecule role: lipid A | Metzger et al. 2009 DOI: 10.1021/bi901750f |
| Enzyme name: LpxL UniProt ID: P0ACV0 Gene name: lpxL Gene GenBank ID: 946216* | Synthesized dimer: Lau(1-3)R3HOMyr Status: indirect evidence in vivo
Confirmation methods: mutation (deletion) ID: 2317 Notes: LpxL particilates in lauroylation of lipid A; its deletion led to the addition of P-EtN or L-Ara4N to the pentaacylated lipid A, as well as of P-EtN to the tetraacylated lipid A, at its phosphate groups. | Organism (ID 21): Escherichia coli K12 Full structure (ID 1793): CSDB ID(s): 681, 810, 811, 2492, 8831, 12409, 31184, 31285, 31328, 32011 Molecule role: lipid A | Klein et al. 2009 DOI: 10.1074/jbc.M900490200 |
| Enzyme name: LpxM UniProt ID: P24205 Gene name: lpxM Gene GenBank ID: 945143* | Synthesized dimer: Myr(1-3)R3HOMyr Status: indirect evidence in vivo
Confirmation methods: mutation (deletion) ID: 2318 Notes: LpxM particilates in myristoylation of lipid A; its deletion led to the addition of P-EtN or L-Ara4N to the pentaacylated lipid A at iys phosphate groups. | Organism (ID 21): Escherichia coli K12 Full structure (ID 1793): CSDB ID(s): 681, 810, 811, 2492, 8831, 12409, 31184, 31285, 31328, 32011 Molecule role: lipid A | |
| Enzyme name: KpsC Enzyme GenBank ID: KIE82100.1 UniProt ID: P42217* Gene GenBank ID: KIE82100.1 | Synthesized dimer: bKdo(2-?)Subst // Subst = 1-oleoyl-2-{12-[(7-nitro-2-1,3-benzoxadiazol-4-yl)amino]dodecanoyl}-sn-glycero-3-[phospho-rac-(1-glycerol)] Donor (ID 35874): bXKdo(2-P-5)xXnucC Acceptor (ID 35875): Subst // Subst = 1-oleoyl-2-{12-[(7-nitro-2-1,3-benzoxadiazol-4-yl)amino]dodecanoyl}-sn-glycero-3-[phospho-rac-(1-glycerol)] Status: evidence in vitro
Confirmation methods: in vitro (purified protein) ID: 2319 Notes: KpsC and KpsS are β-Kdo-transferases, which are able to reconstitute poly-Kdo linker assembly on a fluorescent phosphatidylglycerol acceptor in vitro. | Organism (ID 20): Escherichia coli Full structure (ID 35876): | Willis et al. 2013 DOI: 10.1073/pnas.1312637110 Doyle et al. 2019 DOI: 10.1038/s41589-019-0276-8 |
| Synthesized dimer: bKdo(2-4)bKdo Donor (ID 35874): bXKdo(2-P-5)xXnucC Acceptor (ID 35877): bXKdo(2-7)bXKdo(2-1')Subst // Subst = 8-aminooctyl-BODIPY conjugate = SMILES CC1=C2C=C3C=CC(CCC(NCCCCCCCC{51}O)=O)=[N+]3[B-](F)(F)N2C(C)=C1 Status: evidence in vitro
Confirmation methods: in vitro (purified protein); in vitro (deletion) ID: 2320 Notes: The E. coli KpsC enzyme possesses two GT active sites. The N-terminal GT (KpsC-NEc) is a β-(2→4)-Kdo transferase, whereas the C-terminal GT (KpsC-CEc) transfers β-(2→7)-linked Kdo residues12, creating the alternating linkages seen in the natural product. | Organism (ID 20): Escherichia coli Full structure (ID 35878): | Doyle et al. 2019 DOI: 10.1038/s41589-019-0276-8 | |
| Synthesized dimer: bKdo(2-7)bKdo Donor (ID 35874): bXKdo(2-P-5)xXnucC Acceptor (ID 35879): bXKdo(2-4)bXKdo(2-7)bXKdo(2-1')Subst // Subst = 8-aminooctyl-BODIPY conjugate = SMILES CC1=C2C=C3C=CC(CCC(NCCCCCCCC{51}O)=O)=[N+]3[B-](F)(F)N2C(C)=C1 Status: evidence in vitro
Confirmation methods: in vitro (purified protein); in vitro (deletion) ID: 2321 Notes: The E. coli KpsC enzyme possesses two GT active sites. The N-terminal GT (KpsC-NEc) is a β-(2→4)-Kdo transferase, whereas the C-terminal GT (KpsC-CEc) transfers β-(2→7)-linked Kdo residues12, creating the alternating linkages seen in the natural product. | Organism (ID 20): Escherichia coli Full structure (ID 35880): | ||
| Enzyme name: KpsS UniProt ID: P42218* | Synthesized dimer: bKdo(2-?)Subst // Subst = 1-oleoyl-2-{12-[(7-nitro-2-1,3-benzoxadiazol-4-yl)amino]dodecanoyl}-sn-glycero-3-[phospho-rac-(1-glycerol)] Donor (ID 35874): bXKdo(2-P-5)xXnucC Acceptor (ID 35875): Subst // Subst = 1-oleoyl-2-{12-[(7-nitro-2-1,3-benzoxadiazol-4-yl)amino]dodecanoyl}-sn-glycero-3-[phospho-rac-(1-glycerol)] Status: evidence in vitro
Confirmation methods: in vitro (purified protein) ID: 2322 Notes: KpsC and KpsS are β-Kdo-transferases, which are able to reconstitute poly-Kdo linker assembly on a fluorescent phosphatidylglycerol acceptor in vitro. | Organism (ID 20): Escherichia coli Full structure (ID 35876): | Willis et al. 2013 DOI: 10.1073/pnas.1312637110 |
| Synthesized dimer: bKdo(2-3)DGro Donor (ID 35874): bXKdo(2-P-5)xXnucC Acceptor (ID 35881): lXPam(1-3)[xDGro(1-P-1)]xDGro Status: evidence in vitro
Confirmation methods: in vitro (purified protein); in vitro (deletion) ID: 2323 Notes: The E. coli KpsC enzyme possesses two GT active sites. The N-terminal GT (KpsC-NEc) is a β-(2→4)-Kdo transferase, whereas the C-terminal GT (KpsC-CEc) transfers β-(2→7)-linked Kdo residues12, creating the alternating linkages seen in the natural product. | Organism (ID 20): Escherichia coli Full structure (ID 35882): | Doyle et al. 2019 DOI: 10.1038/s41589-019-0276-8 | |
| Enzyme name: GlgA UniProt ID: P0A6U8* Gene name: glgA Gene GenBank ID: 947932* | Synthesized dimer: aDGlcp(1-4)aDGlcp Donor (ID 34898): aDGlcp(1-P-P-5)xXnucU Acceptor (ID 12376): -4)aDGlcp(1- Status: evidence in vitro
Confirmation methods: in vitro (purified protein), mutation (in recombinant protein) ID: 2324 Notes: GlgA is a glycogen synthase. Rabbit liver glycogen was used as acceptor. | Organism (ID 20): Escherichia coli Full structure (ID 1265): CSDB ID(s): 75, 913, 8387, 10122, 10930, 10950, 11299, 12844, 22727, 23469, 23997, 40803, 40910, 40976, 40987, 41280, 41854, 42475, 43004, 43181, 43670, 45224, 45428, 45692, 47107, 47135, 48302, 49130, 49220, 49221, 49223, 49254, 50051, 50866, 51620, 51649, 51707, 61039, 61122, 65160, 65772, 66436, 102751, 103980, 106369, 110122, 111645, 113048, 137954, 144153, 145284, 146888, 147706, 148587 | Yep et al. 2004a DOI: 10.1016/j.bbrc.2004.02.136 Yep et al. 2004b DOI: 10.1074/jbc.M312686200 Yep et al. 2006 DOI: 10.1016/j.abb.2006.07.003 |
| Enzyme name: NeuS UniProt ID: A0A0H3MKP8* Gene name: neuS Gene GenBank ID: 7151905* | Synthesized dimer: aNeu(2-8)aNeu Donor (ID 35883): Ac(1-5)aXNeu(2-P-P-5)xXnucC Acceptor (ID 35884): -8)[Ac(1-5)]aXNeu(2- Status: direct evidence in vivo
Confirmation methods: in vitro (membrane fraction), mutation (insertion), complementation ID: 2325 | Organism (ID 474): Escherichia coli K1 Exact full structure is unknown | Steenbergen et al. 2003 DOI: 10.1074/jbc.M208837200 Steenbergen et al. 1992 |
| Synthesized dimer: aNeu(2-8)aNeu Donor (ID 35883): Ac(1-5)aXNeu(2-P-P-5)xXnucC Acceptor (ID 35884): -8)[Ac(1-5)]aXNeu(2- Status: evidence in vitro
Confirmation methods: in vitro (membrane fraction) ID: 2326 | Organism (ID 705): Escherichia coli K92 Exact full structure is unknown | ||
| Synthesized dimer: aNeu(2-8)aNeu Donor (ID 35883): Ac(1-5)aXNeu(2-P-P-5)xXnucC Acceptor (ID 35884): -8)[Ac(1-5)]aXNeu(2- Status: indirect evidence in vivo
Confirmation methods: mutation (insertion), complementation ID: 2327 | Organism (ID 705): Escherichia coli K92 Full structure (ID 35885): | ||
| Synthesized dimer: aNeu(2-9)aNeu Donor (ID 35883): Ac(1-5)aXNeu(2-P-P-5)xXnucC Acceptor (ID 35884): -8)[Ac(1-5)]aXNeu(2- Status: indirect evidence in vivo
Confirmation methods: mutation (insertion), complementation ID: 2328 | Organism (ID 705): Escherichia coli K92 Full structure (ID 35885): | ||
| Enzyme name: WbuP UniProt ID: Q697D6* CAZy family: GT2 | Synthesized dimer: bDGalp(1-3)aDGlcpN Status: predicted in silico
Confirmation methods: in silico ID: 2500 | Organism (ID 8186): Escherichia coli O63 Full structure (ID 36560): Molecule role: O-antigen | Stahle et al. DOI: 10.1093/glycob/cwy098 |
| Enzyme name: Orf10 Group: WbbG UniProt ID: A0A0B1B2V5 Gene name: Gene cluster ID: AB811604 | Synthesized dimer: aDGlcp(1-3)aDGlcpN Status: predicted in silico
Confirmation methods: in silico ID: 2501 | Organism (ID 17066): Escherichia coli O19 Full structure (ID 9751): CSDB ID(s): 1526, 3835, 30310 Molecule role: O-antigen | Perepelov et al. 2011a DOI: 10.1016/j.carres.2011.09.013 |
| Enzyme name: WbbQ Group: WbbQ UniProt ID: Q0H8C9 CAZy family: GT2 Gene cluster ID: DQ167407 | Synthesized dimer: aLRhap(1-2)aDGlcp Status: predicted in silico
Confirmation methods: in silico ID: 2502 | Organism (ID 4339): Escherichia coli O148 Full structure (ID 7633): CSDB ID(s): 1889, 3397, 3638, 11572, 12628, 23062, 26257, 27289 Molecule role: O-antigen | Feng et al. 2007 DOI: 10.1099/mic.0.2006/001107-0 |
| Enzyme name: Orf8 Group: WbbQ UniProt ID: A0A0B1B200 Gene name: Gene cluster ID: AB811604 | Synthesized dimer: aLRhap(1-2)aDGlcp Status: predicted in silico
Confirmation methods: in silico ID: 2503 | Organism (ID 17066): Escherichia coli O19 Full structure (ID 9751): CSDB ID(s): 1526, 3835, 30310 Molecule role: O-antigen | Perepelov et al. 2011a DOI: 10.1016/j.carres.2011.09.013 |
| Enzyme name: Orf7 UniProt ID: A0A0A8J398 Gene name: Gene cluster ID: AB811604 | Synthesized dimer: aLRhap(1-2)aLRhap Status: predicted in silico
Confirmation methods: in silico ID: 2504 | Organism (ID 17066): Escherichia coli O19 Full structure (ID 9751): CSDB ID(s): 1526, 3835, 30310 Molecule role: O-antigen | |
| Synthesized dimer: aLRhap(1-2)aLRhap Status: predicted in silico
Confirmation methods: in silico ID: 2505 | Organism (ID 17066): Escherichia coli O19 Full structure (ID 9751): CSDB ID(s): 1526, 3835, 30310 Molecule role: O-antigen | ||
| Enzyme name: WbbR UniProt ID: Q0H8D0 CAZy family: GT2 Gene cluster ID: DQ167407 | Synthesized dimer: aLRhap(1-3)aLRhap Status: predicted in silico
Confirmation methods: in silico ID: 2506 | Organism (ID 4339): Escherichia coli O148 Full structure (ID 7633): CSDB ID(s): 1889, 3397, 3638, 11572, 12628, 23062, 26257, 27289 Molecule role: O-antigen | Feng et al. 2007 DOI: 10.1099/mic.0.2006/001107-0 |
| Enzyme name: Orf10 Group: WbbG UniProt ID: A0A0A8J4V4 Gene cluster ID: AB812020 | Synthesized dimer: aDGlcp(1-3)bDGalpN Status: predicted in silico
Confirmation methods: in silico ID: 2507 | Organism (ID 5362): Escherichia coli O51 Full structure (ID 9747): CSDB ID(s): 701, 1558, 3369, 3380, 27453, 29181, 30384 Molecule role: O-antigen | Perepelov et al. 2011b DOI: 10.1016/j.carres.2011.02.020 |
| Enzyme name: Orf9 UniProt ID: A0A0A8J4A2 Gene cluster ID: AB812020 | Synthesized dimer: aLRhap(1-4)aDGlcp Status: predicted in silico
Confirmation methods: in silico ID: 2508 | Organism (ID 5362): Escherichia coli O51 Full structure (ID 9747): CSDB ID(s): 701, 1558, 3369, 3380, 27453, 29181, 30384 Molecule role: O-antigen | |
| Enzyme name: Orf8 UniProt ID: A0A0A8J6U3 Gene cluster ID: AB812020 | Synthesized dimer: aLRhap(1-2)aLRhap Status: predicted in silico
Confirmation methods: in silico ID: 2509 | Organism (ID 5362): Escherichia coli O51 Full structure (ID 9747): CSDB ID(s): 701, 1558, 3369, 3380, 27453, 29181, 30384 Molecule role: O-antigen | |
| Enzyme name: Orf6 UniProt ID: A0A0A8J4Y6 Gene cluster ID: AB812020 | Synthesized dimer: bDGlcpN(1-2)aLRhap Status: predicted in silico
Confirmation methods: in silico ID: 2510 | Organism (ID 5362): Escherichia coli O51 Full structure (ID 9747): CSDB ID(s): 701, 1558, 3369, 3380, 27453, 29181, 30384 Molecule role: O-antigen | |
| Enzyme name: WfaQ UniProt ID: Q077R1 Gene cluster ID: DQ220293 | Synthesized dimer: aDGalp(1-2)bDGlcp Status: predicted in silico
Confirmation methods: in silico ID: 2512 | Organism (ID 763): Escherichia coli O56 Full structure (ID 1257): CSDB ID(s): 1563, 8382, 20659, 22619, 25691, 108697, 117052, 124618 Molecule role: O-antigen | Cheng et al. 2006a DOI: 10.1007/s00284-006-0032-7 |
| Enzyme name: WfaR UniProt ID: Q077R0 Gene cluster ID: DQ220293 | Synthesized dimer: aNeup(2-3)bDGlcp Status: predicted in silico
Confirmation methods: in silico ID: 2513 | Organism (ID 763): Escherichia coli O56 Full structure (ID 1257): CSDB ID(s): 1563, 8382, 20659, 22619, 25691, 108697, 117052, 124618 Molecule role: O-antigen | |
| Enzyme name: Orf8 Group: WfgD UniProt ID: A0A0A8J4D6 Gene cluster ID: AB812034 | Synthesized dimer: bDGlcp(1-3)bDGlcpN Status: predicted in silico
Confirmation methods: in silico ID: 2514 | Organism (ID 6959): Escherichia coli O82 Full structure (ID 8742): CSDB ID(s): 1588, 30858 Molecule role: O-antigen | Iguchi et al. 2015 DOI: 10.1093/dnares/dsu043 |
| Enzyme name: Orf7 Group: WcnV UniProt ID: A0A0A8J5J0 Gene cluster ID: AB812034 | Synthesized dimer: bDGalp(1-4)bDGlcp Status: predicted in silico
Confirmation methods: in silico ID: 2515 | Organism (ID 6959): Escherichia coli O82 Full structure (ID 8742): CSDB ID(s): 1588, 30858 Molecule role: O-antigen | |
| Enzyme name: Orf6 UniProt ID: A0A0A8J5F8 Gene cluster ID: AB812034 | Synthesized dimer: aDGlcp(1-4)bDGalp Status: predicted in silico
Confirmation methods: in silico ID: 2516 | Organism (ID 6959): Escherichia coli O82 Full structure (ID 8742): CSDB ID(s): 1588, 30858 Molecule role: O-antigen | |
| Enzyme name: Orf4 UniProt ID: A0A0A8J7E2 Gene cluster ID: AB812034 | Synthesized dimer: P(?-6)aDGlcp Status: predicted in silico
Confirmation methods: in silico ID: 2517 | Organism (ID 6959): Escherichia coli O82 Full structure (ID 8742): CSDB ID(s): 1588, 30858 Molecule role: O-antigen | |
| Enzyme name: WfgE Group: WfgE UniProt ID: B5L3F3 CAZy family: GT4 Gene cluster ID: EU294170 | Synthesized dimer: aDGlcp(1-2)bDGlcp Status: predicted in silico
Confirmation methods: in silico ID: 2519 | Organism (ID 2445): Escherichia coli O152 Full structure (ID 2739): CSDB ID(s): 1893, 3192, 20689, 21771, 22850, 23078, 27499, 31913 Molecule role: O-antigen | Liu et al. 2008 DOI: 10.1111/j.1574-6976.2008.00114.x |
| Enzyme name: WfgC UniProt ID: B5L3F0 Gene cluster ID: EU294170 | Synthesized dimer: P(?-6)aDGlcp Status: predicted in silico
Confirmation methods: in silico ID: 2520 | Organism (ID 2445): Escherichia coli O152 Full structure (ID 2739): CSDB ID(s): 1893, 3192, 20689, 21771, 22850, 23078, 27499, 31913 Molecule role: O-antigen | |
| Enzyme name: WfgB UniProt ID: B5L3E8 Gene cluster ID: EU294170 | Synthesized dimer: bLRhap(1-4)aDGlcpN Status: predicted in silico
Confirmation methods: in silico ID: 2521 | Organism (ID 2445): Escherichia coli O152 Full structure (ID 2739): CSDB ID(s): 1893, 3192, 20689, 21771, 22850, 23078, 27499, 31913 Molecule role: O-antigen | |
| Enzyme name: WcnW Group: WfgD UniProt ID: E2DNQ7 CAZy family: GT2 Gene cluster ID: GU068045 | Synthesized dimer: bDGlcp(1-3)aDGlcpN Status: predicted in silico
Confirmation methods: in silico ID: 2522 | Organism (ID 6958): Escherichia coli O165 Full structure (ID 12004): CSDB ID(s): 1907 Molecule role: O-antigen | Senchenkova et al. 2016b DOI: 10.1093/glycob/cwv106 |
| Enzyme name: WcnV Group: WcnV UniProt ID: E2DNQ6 CAZy family: GT2 Gene cluster ID: GU068045 | Synthesized dimer: bDGalp(1-4)bDGlcp Status: predicted in silico
Confirmation methods: in silico ID: 2523 | Organism (ID 6958): Escherichia coli O165 Full structure (ID 12004): CSDB ID(s): 1907 Molecule role: O-antigen | |
| Enzyme name: WcnU UniProt ID: E2DNQ4 Gene cluster ID: GU068045 | Synthesized dimer: aPsep(2-6)bDGalp Donor (ID 36559): lX4HOBut(1-5)[Ac(1-7)]aXPsep Status: predicted in silico
Confirmation methods: in silico ID: 2524 | Organism (ID 6958): Escherichia coli O165 Full structure (ID 12004): CSDB ID(s): 1907 Molecule role: O-antigen | |
| Enzyme name: WcmW Group: WfgD UniProt ID: E2DNR7 CAZy family: GT2 Gene cluster ID: GU068046 | Synthesized dimer: bDGlcp(1-3)bDGlcpN Status: predicted in silico
Confirmation methods: in silico ID: 2525 | Organism (ID 1538): Escherichia coli O173 Full structure (ID 2719): CSDB ID(s): 1915, 10305, 20694, 21773 Molecule role: O-antigen | Wang et al. 2010a DOI: 10.1016/j.mcp.2010.06.002 |
| Enzyme name: WcmX Group: WfgE UniProt ID: E2DNR8 CAZy family: GT4 Gene cluster ID: GU068046 | Synthesized dimer: aDGlcp(1-2)bDGlcp Status: predicted in silico
Confirmation methods: in silico ID: 2526 | Organism (ID 1538): Escherichia coli O173 Full structure (ID 2719): CSDB ID(s): 1915, 10305, 20694, 21773 Molecule role: O-antigen | |
| Enzyme name: WcmV UniProt ID: E2DNR5 Gene name: wcmV Gene cluster ID: GU068046 | Synthesized dimer: P(?-6)aDGlcp Status: predicted in silico
Confirmation methods: in silico ID: 2527 | Organism (ID 1538): Escherichia coli O173 Full structure (ID 2719): CSDB ID(s): 1915, 10305, 20694, 21773 Molecule role: O-antigen | |
| Enzyme name: WcmU UniProt ID: E2DNQ9 CAZy family: GT2 Gene cluster ID: GU068046 | Synthesized dimer: aLFucp(1-4)aDGlcp Status: predicted in silico
Confirmation methods: in silico ID: 2528 | Organism (ID 1538): Escherichia coli O173 Full structure (ID 2719): CSDB ID(s): 1915, 10305, 20694, 21773 Molecule role: O-antigen | |
| Enzyme name: Orf9 Group: WfgD UniProt ID: A0A0B1DH13 Gene name: tuaG Gene cluster ID: AB812079 | Synthesized dimer: bDGlcpA(1-3)bDGlcpN Status: predicted in silico
Confirmation methods: in silico ID: 2529 | Organism (ID 7179): Escherichia coli O182 Full structure (ID 5458): CSDB ID(s): 1924, 10876, 117877 Molecule role: O-antigen | Iguchi et al. 2015 DOI: 10.1093/dnares/dsu043 |
| Enzyme name: Orf8 UniProt ID: A0A0A8J741 Gene cluster ID: AB812079 | Synthesized dimer: bDGlcpN(1-4)bDGlcpA Status: predicted in silico
Confirmation methods: in silico ID: 2530 | Organism (ID 7179): Escherichia coli O182 Full structure (ID 5458): CSDB ID(s): 1924, 10876, 117877 Molecule role: O-antigen | |
| Enzyme name: Orf6 UniProt ID: A0A0A8J6K5 Gene cluster ID: AB812079 | Synthesized dimer: bLRhapN3N(1-3)bDGlcpN Status: predicted in silico
Confirmation methods: in silico ID: 2531 | Organism (ID 7179): Escherichia coli O182 Full structure (ID 5458): CSDB ID(s): 1924, 10876, 117877 Molecule role: O-antigen | |
| Enzyme name: WclQ Group: WffJ UniProt ID: B5T086 CAZy family: GT2 Gene name: wclQ Gene cluster ID: EU694098 | Synthesized dimer: bDGlcp(1-3)bDGalpN Status: predicted in silico
Confirmation methods: in silico ID: 2532 | Organism (ID 1871): Escherichia coli O21 Full structure (ID 3375): CSDB ID(s): 1529, 3371, 4937, 10389, 11682, 20649, 26890, 27435, 28337, 30360, 108742, 115996 Molecule role: O-antigen | Ren et al. 2008 DOI: 10.1016/j.mimet.2008.07.010 |
| Enzyme name: WclP UniProt ID: B5T084 CAZy family: GT25 Gene name: wclP Gene cluster ID: EU694098 | Synthesized dimer: bDGalp(1-4)bDGlcp Status: predicted in silico
Confirmation methods: in silico ID: 2533 | Organism (ID 1871): Escherichia coli O21 Full structure (ID 3375): CSDB ID(s): 1529, 3371, 4937, 10389, 11682, 20649, 26890, 27435, 28337, 30360, 108742, 115996 Molecule role: O-antigen | |
| Enzyme name: WclO UniProt ID: B5T083 CAZy family: GT2 Gene name: wclO Gene cluster ID: EU694098 | Synthesized dimer: bDGlcpN(1-2)bDGlcp Status: predicted in silico
Confirmation methods: in silico ID: 2534 | Organism (ID 1871): Escherichia coli O21 Full structure (ID 3375): CSDB ID(s): 1529, 3371, 4937, 10389, 11682, 20649, 26890, 27435, 28337, 30360, 108742, 115996 Molecule role: O-antigen | |
| Enzyme name: WclN UniProt ID: B5T082 Gene name: wclN Gene cluster ID: EU694098 | Synthesized dimer: bDGalp(1-4)bDGalp Status: predicted in silico
Confirmation methods: in silico ID: 2535 | Organism (ID 1871): Escherichia coli O21 Full structure (ID 3375): CSDB ID(s): 1529, 3371, 4937, 10389, 11682, 20649, 26890, 27435, 28337, 30360, 108742, 115996 Molecule role: O-antigen | |
| Enzyme name: WfaM Group: WffJ UniProt ID: 077S5 Gene name: wfaM Gene cluster ID: DQ220292 | Synthesized dimer: bDGlcp(1-3)bDGalpN Status: predicted in silico
Confirmation methods: in silico ID: 2536 | Organism (ID 764): Escherichia coli O24 Full structure (ID 1258): CSDB ID(s): 1532, 20021, 20651, 108689, 117055, 124617 Molecule role: O-antigen | Cheng et al. 2006a DOI: 10.1007/s00284-006-0032-7 |
| Enzyme name: WfaO UniProt ID: Q077R7 CAZy family: GT4 Gene name: wfaO Gene cluster ID: DQ220292 | Synthesized dimer: aDGlcp(1-2)bDGlcp Status: predicted in silico
Confirmation methods: in silico ID: 2537 | Organism (ID 764): Escherichia coli O24 Full structure (ID 1258): CSDB ID(s): 1532, 20021, 20651, 108689, 117055, 124617 Molecule role: O-antigen | |
| Enzyme name: WfaN UniProt ID: Q077S0 Gene name: wfaN Gene cluster ID: DQ220292 | Synthesized dimer: aNeup(2-3)bDGlcp Status: predicted in silico
Confirmation methods: in silico ID: 2538 | Organism (ID 764): Escherichia coli O24 Full structure (ID 1258): CSDB ID(s): 1532, 20021, 20651, 108689, 117055, 124617 Molecule role: O-antigen | |
| Enzyme name: WejU Group: WffJ UniProt ID: D7P6D4 CAZy family: GT2 Gene name: WejU Gene cluster ID: GU014555 | Synthesized dimer: bDGlcp(1-3)bDGalpN Status: predicted in silico
Confirmation methods: in silico ID: 2539 | Organism (ID 8177): Escherichia coli O27 Full structure (ID 12865): CSDB ID(s): 1535, 12460, 12463 Molecule role: O-antigen | Wang et al. 2010b DOI: 10.1128/JCM.02014-09 |
| Enzyme name: WejX Group: Wffl UniProt ID: D7P6D9 CAZy family: GT4 Gene name: WejX Gene cluster ID: GU014555 | Synthesized dimer: aDGalp(1-6)bDGlcp Status: predicted in silico
Confirmation methods: in silico ID: 2540 | Organism (ID 8177): Escherichia coli O27 Full structure (ID 12865): CSDB ID(s): 1535, 12460, 12463 Molecule role: O-antigen | |
| Enzyme name: WejW UniProt ID: D7P6D7 CAZy family: GT2 Gene name: WejW Gene cluster ID: GU014555 | Synthesized dimer: bDGlcpA(1-3)aDGalp Status: predicted in silico
Confirmation methods: in silico ID: 2541 | Organism (ID 8177): Escherichia coli O27 Full structure (ID 12865): CSDB ID(s): 1535, 12460, 12463 Molecule role: O-antigen | |
| Enzyme name: WeiL Group: WffJ UniProt ID: D8WNC1 CAZy family: GT2 Gene name: WeiL Gene cluster ID: GU220362 | Synthesized dimer: bDGlcp(1-3)aDGalpN Status: predicted in silico
Confirmation methods: in silico ID: 2542 | Organism (ID 4702): Escherichia coli O61 Full structure (ID 8638): CSDB ID(s): 1568, 26824 Molecule role: O-antigen | Li et al. 2010a DOI: 10.1016/j.carres.2010.04.008 |
| Enzyme name: WeiK UniProt ID: D8WNB9 Gene name: WeiK Gene cluster ID: GU220362 | Synthesized dimer: a8eLegp(2-4)bDGlcp Status: predicted in silico
Confirmation methods: in silico ID: 2543 | Organism (ID 4702): Escherichia coli O61 Full structure (ID 8638): CSDB ID(s): 1568, 26824 Molecule role: O-antigen | |
| Enzyme name: Orf9 Group: WffJ UniProt ID: A0A0A8J7D2 Gene cluster ID: AB812033 | Synthesized dimer: bDGlcp(1-3)bDGalpN Status: predicted in silico
Confirmation methods: in silico ID: 2544 | Organism (ID 7614): Escherichia coli O81 Full structure (ID 12860): CSDB ID(s): 1587, 12455 Molecule role: O-antigen | Zdorovenko et al. 2018 DOI: 10.1134/S0006297918050061 |
| Enzyme name: Orf8 UniProt ID: A0A0A8J5H6 Gene cluster ID: AB812033 | Synthesized dimer: aDGalp(1-6)bDGlcp Status: predicted in silico
Confirmation methods: in silico ID: 2545 | Organism (ID 7614): Escherichia coli O81 Full structure (ID 12860): CSDB ID(s): 1587, 12455 Molecule role: O-antigen | |
| Enzyme name: Orf4 UniProt ID: A0A0A8J7C8 Gene name: tagF Gene cluster ID: AB812033 | Synthesized dimer: P(?-3)bDGalpN Status: predicted in silico
Confirmation methods: in silico ID: 2546 | Organism (ID 7614): Escherichia coli O81 Full structure (ID 12860): CSDB ID(s): 1587, 12455 Molecule role: O-antigen | |
| Enzyme name: WffJ Group: WffJ UniProt ID: B5L472 CAZy family: GT2 Gene name: WffJ Gene cluster ID: EU296421 | Synthesized dimer: bDGlcp(1-3)bDGalpN Status: predicted in silico
Confirmation methods: in silico ID: 2547 | Organism (ID 4235): Escherichia coli O130 Full structure (ID 7427): CSDB ID(s): 1871, 11561, 11596, 23070, 25743 Molecule role: O-antigen | Liu et al. 2008 DOI: 10.1111/j.1574-6976.2008.00114.x |
| Enzyme name: WffI UniProt ID: B5L471 CAZy family: GT4 Gene name: wffI Gene cluster ID: EU296421 | Synthesized dimer: aDGalp(1-6)bDGlcp Status: predicted in silico
Confirmation methods: in silico ID: 2548 | Organism (ID 4235): Escherichia coli O130 Full structure (ID 7427): CSDB ID(s): 1871, 11561, 11596, 23070, 25743 Molecule role: O-antigen | |
| Enzyme name: WffH UniProt ID: B5L470 CAZy family: GT2 Gene name: wffH Gene cluster ID: EU296421 | Synthesized dimer: bDGalpN(1-4)aDGalp Status: predicted in silico
Confirmation methods: in silico ID: 2549 | Organism (ID 4235): Escherichia coli O130 Full structure (ID 7427): CSDB ID(s): 1871, 11561, 11596, 23070, 25743 Molecule role: O-antigen | |
| Enzyme name: WffG UniProt ID: B5L468 Gene name: wffG Gene cluster ID: EU296421 | Synthesized dimer: P(?-4)bDGalpN Status: predicted in silico
Confirmation methods: in silico ID: 2550 | Organism (ID 4235): Escherichia coli O130 Full structure (ID 7427): CSDB ID(s): 1871, 11561, 11596, 23070 Molecule role: O-antigen | |
| Enzyme name: WbdN Group: WffJ UniProt ID: O85334 CAZy family: GT2 Gene name: WbdN Gene cluster ID: AF061251 | Synthesized dimer: bDGlcp(1-3)aDGalpN Status: predicted in silico
Confirmation methods: in silico ID: 2551 | Organism (ID 584): Escherichia coli O157 Full structure (ID 34): CSDB ID(s): 695, 1170, 1619, 1898, 3312, 3776, 3909, 7417, 8630, 8701, 8988, 12944, 20690, 21404, 25635, 27158, 27338, 27347, 27497, 29975, 30358, 31485, 31911, 108622, 108677, 130570 Molecule role: O-antigen | Wang et al. 1998a |
| Enzyme name: WbdO UniProt ID: O85336 CAZy family: GT2 Gene name: wbdO Gene cluster ID: AF061251 | Synthesized dimer: aLFucp(1-4)bDGlcp Status: predicted in silico
Confirmation methods: in silico ID: 2552 | Organism (ID 584): Escherichia coli O157 Full structure (ID 34): CSDB ID(s): 695, 1170, 1619, 1898, 3312, 3776, 3909, 7417, 8630, 8701, 8988, 12944, 20690, 21404, 25635, 27158, 27338, 27347, 27497, 29975, 30358, 31485, 31911, 108622, 108677, 130570 Molecule role: O-antigen | |
| Enzyme name: WbdP UniProt ID: O85338 CAZy family: GT4 Gene name: wbdP Gene cluster ID: AF061251 | Synthesized dimer: aDRhap4N(1-3)aLFucp Status: predicted in silico
Confirmation methods: in silico ID: 2553 | Organism (ID 584): Escherichia coli O157 Full structure (ID 34): CSDB ID(s): 695, 1170, 1619, 1898, 3312, 3776, 3909, 7417, 8630, 8701, 8988, 12944, 20690, 21404, 25635, 27158, 27338, 27347, 27497, 29975, 30358, 31485, 31911, 108622, 108677, 130570 Molecule role: O-antigen | |
| Enzyme name: WffE Group: WffE UniProt ID: B5L3L4 CAZy family: GT4 Gene name: wffE Gene cluster ID: EU294175 | Synthesized dimer: aDManp(1-3)bDGlcpN Status: predicted in silico
Confirmation methods: in silico ID: 2554 | Organism (ID 2915): Escherichia coli O58 Full structure (ID 4713): CSDB ID(s): 1565, 3383, 3645, 12626, 20660, 23068, 25741, 30177, 108653, 122453, 122454 Molecule role: O-antigen | Liu et al. 2008 DOI: 10.1111/j.1574-6976.2008.00114.x |
| Enzyme name: WffD Group: WffD UniProt ID: B5L3L3 Gene name: wffD Gene cluster ID: EU294175 | Synthesized dimer: bDManp(1-4)aDManp Status: predicted in silico
Confirmation methods: in silico ID: 2555 | Organism (ID 2915): Escherichia coli O58 Full structure (ID 4713): CSDB ID(s): 1565, 3383, 3645, 12626, 20660, 23068, 25741, 30177, 108653, 122453, 122454 Molecule role: O-antigen | |
| Enzyme name: WffC UniProt ID: B5L3L1 Gene name: wffC Gene cluster ID: EU294175 | Synthesized dimer: aLRhap(1-3)bDManp Status: predicted in silico
Confirmation methods: in silico ID: 2556 | Organism (ID 2915): Escherichia coli O58 Full structure (ID 4713): CSDB ID(s): 1565, 3383, 3645, 12626, 20660, 23068, 25741, 30177, 108653, 122453, 122454 Molecule role: O-antigen | |
| Enzyme name: WejO Group: WffE UniProt ID: D6BV52 CAZy family: GT4 Gene name: wejO Gene cluster ID: FJ940775 | Synthesized dimer: aDManp(1-3)bDGlcpN Status: predicted in silico
Confirmation methods: in silico ID: 2557 | Organism (ID 2940): Escherichia coli O78 Full structure (ID 6994): CSDB ID(s): 1584, 2677, 27460, 30392, 108704, 115082 Molecule role: O-antigen | Liu et al. 2010a DOI: 10.1016/j.vetmic.2009.10.019 |
| Enzyme name: WejN Group: WffD UniProt ID: D6BV51 Gene name: wejN Gene cluster ID: FJ940775 | Synthesized dimer: bDManp(1-4)aDManp Status: predicted in silico
Confirmation methods: in silico ID: 2558 | Organism (ID 2940): Escherichia coli O78 Full structure (ID 6994): CSDB ID(s): 1584, 2677, 27460, 30392, 108704, 115082 Molecule role: O-antigen | |
| Enzyme name: WejQ UniProt ID: D6BV56 CAZy family: GT4 Gene name: wejQ Gene cluster ID: FJ940775 | Synthesized dimer: bDGlcpN(1-4)bDManp Status: predicted in silico
Confirmation methods: in silico ID: 2559 | Organism (ID 2940): Escherichia coli O78 Full structure (ID 6994): CSDB ID(s): 1584, 2677, 27460, 30392, 108704, 115082 Molecule role: O-antigen | |
| Enzyme name: Orf12 Group: WffE UniProt ID: A0A0A8J4I6 Gene name: pimB Gene cluster ID: AB812037 | Synthesized dimer: aDManp(1-3)bDGlcpN Status: predicted in silico
Confirmation methods: in silico ID: 2560 | Organism (ID 4047): Escherichia coli O88 Full structure (ID 363): CSDB ID(s): 1595, 9723, 20668 Molecule role: O-antigen | Iguchi et al. 2015 DOI: 10.1093/dnares/dsu043 |
| Enzyme name: Orf11 Group: WfcC UniProt ID: A0A0A8J5P Gene cluster ID: AB812037 | Synthesized dimer: aDManp(1-3)aDManp Status: predicted in silico
Confirmation methods: in silico ID: 2561 | Organism (ID 4047): Escherichia coli O88 Full structure (ID 363): CSDB ID(s): 1595, 9723, 20668 Molecule role: O-antigen | |
| Enzyme name: Orf9 UniProt ID: A0A0A8J4W9 Gene cluster ID: AB812037 | Synthesized dimer: aL6dTalp(1-3)aDManp Status: predicted in silico
Confirmation methods: in silico ID: 2562 | Organism (ID 4047): Escherichia coli O88 Full structure (ID 363): CSDB ID(s): 1595, 9723, 20668 Molecule role: O-antigen | |
| Enzyme name: WfcD Group: WffE UniProt ID: A6MF03 CAZy family: GT4 Gene name: wfcD Gene cluster ID: DQ868765 | Synthesized dimer: aDManp(1-3)bDGlcpN Status: predicted in silico
Confirmation methods: in silico ID: 2565 | Organism (ID 149): Escherichia coli O141 Full structure (ID 269): CSDB ID(s): 1883, 11880, 20684 Molecule role: O-antigen | Han et al. 2007 DOI: 10.1128/AEM.01820-06 |
| Enzyme name: WfcC Group: WfcC UniProt ID: A6MF02 CAZy family: GT4 Gene name: wfcC Gene cluster ID: DQ868765 | Synthesized dimer: aDManp(1-3)aDManp Status: predicted in silico
Confirmation methods: in silico ID: 2566 | Organism (ID 149): Escherichia coli O141 Full structure (ID 269): CSDB ID(s): 1883, 11880, 20684 Molecule role: O-antigen | |
| Enzyme name: WfcB UniProt ID: A6MF00 CAZy family: GT2 Gene name: wfcB Gene cluster ID: DQ868765 | Synthesized dimer: aLRhap(1-3)aDManp Status: predicted in silico
Confirmation methods: in silico ID: 2567 | Organism (ID 149): Escherichia coli O141 Full structure (ID 269): CSDB ID(s): 1883, 11880, 20684 Molecule role: O-antigen | |
| Enzyme name: WfcA UniProt ID: A6MEZ9 CAZy family: GT4 Gene name: wfcA Gene cluster ID: DQ868765 | Synthesized dimer: bDGlcpA(1-2)aDManp Status: predicted in silico
Confirmation methods: in silico ID: 2568 | Organism (ID 149): Escherichia coli O141 Full structure (ID 269): CSDB ID(s): 1883, 11880, 20684 Molecule role: O-antigen | |
| Enzyme name: WbaY Group: WffE UniProt ID: A0A0A8J757 Gene cluster ID: AB812069 | Synthesized dimer: aDManp(1-3)bDGalpN Status: predicted in silico
Confirmation methods: in silico ID: 2569 | Organism (ID 7116): Escherichia coli O169 Full structure (ID 13043): CSDB ID(s): 1911, 11567, 12641 Molecule role: O-antigen | Perepelov et al. 2015a DOI: 10.1016/j.carres.2015.05.016 |
| Enzyme name: WbaX UniProt ID: A0A0A8J6I0 Gene cluster ID: AB812069 | Synthesized dimer: aDManp(1-2)aDManp Status: predicted in silico
Confirmation methods: in silico ID: 2570 | Organism (ID 7116): Escherichia coli O169 Full structure (ID 13043): CSDB ID(s): 1911, 11567, 12641 Molecule role: O-antigen | |
| Enzyme name: WbaT UniProt ID: A0A0A0H745 Gene cluster ID: AB812069 | Synthesized dimer: aDGalp(1-6)aDManp Status: predicted in silico
Confirmation methods: in silico ID: 2571 | Organism (ID 7116): Escherichia coli O169 Full structure (ID 13043): CSDB ID(s): 1911, 11567, 12641 Molecule role: O-antigen | |
| Enzyme name: WbaS UniProt ID: A0A0A8J778 Gene cluster ID: AB812069 | Synthesized dimer: bDGlcpA(1-4)aDGalp Status: predicted in silico
Confirmation methods: in silico ID: 2572 | Organism (ID 7116): Escherichia coli O169 Full structure (ID 13043): CSDB ID(s): 1911, 11567, 12641 Molecule role: O-antigen | |
| Enzyme name: Orf12 UniProt ID: A0A0A8J762 Gene cluster ID: AB812069 | Synthesized dimer: bDGlcp(1-6)aDGalp Status: predicted in silico
Confirmation methods: in silico ID: 2573 | Organism (ID 7116): Escherichia coli O169 Full structure (ID 13043): CSDB ID(s): 1911, 11567, 12641 Molecule role: O-antigen | |
| Enzyme name: Orf4 Group: WffE UniProt ID: A0A0A8J982 Gene cluster ID: AB812073 | Synthesized dimer: aDManp(1-3)bDGalpN Status: predicted in silico
Confirmation methods: in silico ID: 2574 | Organism (ID 5415): Escherichia coli O175 Full structure (ID 9863): CSDB ID(s): 1917 Molecule role: O-antigen | Iguchi et al. 2015 DOI: 10.1093/dnares/dsu043 |
| Enzyme name: Orf3 UniProt ID: A0A075TE13 Gene cluster ID: AB812073 | Synthesized dimer: aDManp(1-2)aDManp Status: predicted in silico
Confirmation methods: in silico ID: 2575 | Organism (ID 5415): Escherichia coli O175 Full structure (ID 9863): CSDB ID(s): 1917 Molecule role: O-antigen | |
| Enzyme name: Orf2 UniProt ID: A0A075TEP7 Gene name: pglJ Gene cluster ID: AB812073 | Synthesized dimer: aDGlcpA(1-3)aDManp Status: predicted in silico
Confirmation methods: in silico ID: 2576 | Organism (ID 5415): Escherichia coli O175 Full structure (ID 9863): CSDB ID(s): 1917 Molecule role: O-antigen | |
| Enzyme name: Orf7 UniProt ID: A0A0A8J7F5 Gene cluster ID: AB812073 | Synthesized dimer: aDGlcp(1-4)aDGlcpA Status: predicted in silico
Confirmation methods: in silico ID: 2577 | Organism (ID 5415): Escherichia coli O175 Full structure (ID 9863): CSDB ID(s): 1917 Molecule role: O-antigen | |
| Enzyme name: WbaY Group: WffE UniProt ID: A0A0A8J7F5 Gene cluster ID: AB627352 | Synthesized dimer: aDManp(1-3)bDGalpN Status: predicted in silico
Confirmation methods: in silico ID: 2578 | Organism (ID 7183): Escherichia coli O183 Full structure (ID 12404): CSDB ID(s): 711, 1925, 3975, 10148, 11560, 12925, 23051, 26619 Molecule role: O-antigen | Iguchi et al. 2011 DOI: 10.1128/JCM.01197-11 |
| Enzyme name: WbaT UniProt ID: G3XGB0 Gene name: wbaT Gene cluster ID: AB627352 | Synthesized dimer: aDGalp(1-6)aDManp Status: predicted in silico
Confirmation methods: in silico ID: 2579 | Organism (ID 7183): Escherichia coli O183 Full structure (ID 12404): CSDB ID(s): 711, 1925, 3975, 10148, 12925, 23051, 26619 Molecule role: O-antigen | |
| Enzyme name: WbaS UniProt ID: G3XGA9 Gene name: wbaS Gene cluster ID: AB627352 | Synthesized dimer: bDGlcpA(1-4)aDGalp Status: predicted in silico
Confirmation methods: in silico ID: 2580 | Organism (ID 7183): Escherichia coli O183 Full structure (ID 12404): CSDB ID(s): 711, 1925, 3975, 10148, 12925, 23051, 26619 Molecule role: O-antigen | |
| Enzyme name: WbaM UniProt ID: G3XGB6 Gene name: wbaM Gene cluster ID: AB627352 | Synthesized dimer: bDRibf(1-4)bDGlcpA Status: predicted in silico
Confirmation methods: in silico ID: 2581 | Organism (ID 7183): Escherichia coli O183 Full structure (ID 12404): CSDB ID(s): 711, 1925, 3975, 10148, 12925, 23051, 26619 Molecule role: O-antigen | |
| Enzyme name: WbaY Group: WffE UniProt ID: A0A0A8J7F5 Gene cluster ID: AB627352 | Synthesized dimer: aDManp(1-3)bDGalpN Status: predicted in silico
Confirmation methods: in silico ID: 2582 | Organism (ID 7183): Escherichia coli O183 Full structure (ID 12264): CSDB ID(s): 11560 Molecule role: O-antigen | |
| Enzyme name: WbaX UniProt ID: G3XGB2 Gene name: wbaX Gene cluster ID: AB627352 | Synthesized dimer: aDManp(1-4)aDManp Status: predicted in silico
Confirmation methods: in silico ID: 2583 | Organism (ID 7183): Escherichia coli O183 Full structure (ID 12264): CSDB ID(s): 11560 Molecule role: O-antigen | |
| Enzyme name: WbaT UniProt ID: G3XGB0 Gene name: wbaT Gene cluster ID: AB627352 | Synthesized dimer: aDGalp(1-6)aDManp Status: predicted in silico
Confirmation methods: in silico ID: 2584 | Organism (ID 7183): Escherichia coli O183 Full structure (ID 12264): CSDB ID(s): 11560 Molecule role: O-antigen | |
| Enzyme name: WbaS UniProt ID: G3XGA9 Gene name: wbaS Gene cluster ID: AB627352 | Synthesized dimer: bDGlcpA(1-4)aDGalp Status: predicted in silico
Confirmation methods: in silico ID: 2585 | Organism (ID 7183): Escherichia coli O183 Full structure (ID 12264): CSDB ID(s): 11560 Molecule role: O-antigen | |
| Enzyme name: WbaM UniProt ID: G3XGB6 Gene name: wbaM Gene cluster ID: AB627352 | Synthesized dimer: bDRibf(1-4)bDGlcpA Status: predicted in silico
Confirmation methods: in silico ID: 2586 | Organism (ID 7183): Escherichia coli O183 Full structure (ID 12264): CSDB ID(s): 11560 Molecule role: O-antigen | |
| Enzyme name: Orf12 Group: WffE UniProt ID: A0A075TES6 Gene name: epsE Gene cluster ID: AB812083 | Synthesized dimer: aDManp(1-3)bDGlcpN Status: predicted in silico
Confirmation methods: in silico ID: 2587 | Organism (ID 7181): Escherichia coli O187 Full structure (ID 12400): CSDB ID(s): 1934 Molecule role: O-antigen | Iguchi et al. 2015 DOI: 10.1093/dnares/dsu043 |
| Enzyme name: Orf10 UniProt ID: A0A075TFV7 Gene name: pglH Gene cluster ID: AB812083 | Synthesized dimer: aDGlcpA(1-3)aDManp Status: predicted in silico
Confirmation methods: in silico ID: 2588 | Organism (ID 7181): Escherichia coli O187 Full structure (ID 12400): CSDB ID(s): 1934 Molecule role: O-antigen | |
| Enzyme name: Orf9 UniProt ID: A0A0A8J9R9 Gene cluster ID: AB812083 | Synthesized dimer: aDGlcpN(1-4)aDGlcpA Status: predicted in silico
Confirmation methods: in silico ID: 2589 | Organism (ID 7181): Escherichia coli O187 Full structure (ID 12400): CSDB ID(s): 1934 Molecule role: O-antigen | |
| Enzyme name: Orf7 UniProt ID: A0A0A8J7T6 Gene cluster ID: AB812083 | Synthesized dimer: bDFucp3N(1-3)aDGlcpN Status: predicted in silico
Confirmation methods: in silico ID: 2590 | Organism (ID 7181): Escherichia coli O187 Full structure (ID 12400): CSDB ID(s): 1934 Molecule role: O-antigen | |
| Enzyme name: Orf7 Group: WbaD UniProt ID: A0A0A8J314 Gene cluster ID: AB811597 | Synthesized dimer: bDManp(1-3)aDGlcpN Status: predicted in silico
Confirmation methods: in silico ID: 2591 | Organism (ID 17067): Escherichia coli O6a Full structure (ID 5102): CSDB ID(s): 1506, 12692, 20639, 21082, 29393, 108698, 114261 Molecule role: O-antigen | |
| Enzyme name: Orf5 UniProt ID: A0A0A2P0S0 Gene cluster ID: AB811597 | Synthesized dimer: bDManp(1-4)bDManp Status: predicted in silico
Confirmation methods: in silico ID: 2592 | Organism (ID 17067): Escherichia coli O6a Full structure (ID 5102): CSDB ID(s): 1506, 12692, 20639, 21082, 29393, 108698, 114261 Molecule role: O-antigen | |
| Enzyme name: Orf4 UniProt ID: A0A067HFD2 Gene cluster ID: AB811597 | Synthesized dimer: aDGalpN(1-3)bDManp Status: predicted in silico
Confirmation methods: in silico ID: 2593 | Organism (ID 17067): Escherichia coli O6a Full structure (ID 5102): CSDB ID(s): 1506, 12692, 20639, 21082, 29393, 108698, 114261 Molecule role: O-antigen | |
| Enzyme name: Orf3 UniProt ID: A0A0A8J3J4 Gene cluster ID: AB811597 | Synthesized dimer: bDGlcp(1-2)bDManp Status: predicted in silico
Confirmation methods: in silico ID: 2594 | Organism (ID 17067): Escherichia coli O6a Full structure (ID 5102): CSDB ID(s): 1506, 12692, 20639, 21082, 29393, 108698, 114261 Molecule role: O-antigen | |
| Enzyme name: WbaD Group: WbaD UniProt ID: Q1L815 CAZy family: GT4 Gene name: wbaD Gene cluster ID: AB812084 | Synthesized dimer: bDManp(1-3)aDGlcpN Status: predicted in silico
Confirmation methods: in silico ID: 2595 | Organism (ID 1588): Escherichia coli O17 Full structure (ID 2762): CSDB ID(s): 1520, 12788, 20644, 21693, 23197, 30343 Molecule role: O-antigen | |
| Enzyme name: WbaC Group: WbaC UniProt ID: Q1L822 CAZy family: GT4 Gene name: wbaC Gene cluster ID: AB812084 | Synthesized dimer: aDManp(1-2)bDManp Status: predicted in silico
Confirmation methods: in silico ID: 2596 | Organism (ID 1588): Escherichia coli O17 Full structure (ID 2762): CSDB ID(s): 1520, 12788, 20644, 21693, 23197, 30343 Molecule role: O-antigen | |
| Enzyme name: WbaC UniProt ID: Q1L822 CAZy family: GT4 Gene name: wbaC Gene cluster ID: AB812084 | Synthesized dimer: aDManp(1-2)aDManp Status: predicted in silico
Confirmation methods: in silico ID: 2597 | Organism (ID 1588): Escherichia coli O17 Full structure (ID 2762): CSDB ID(s): 1520, 12788, 20644, 21693, 23197, 30343 Molecule role: O-antigen | |
| Enzyme name: WbaD Group: WbaD UniProt ID: Q1L815 CAZy family: GT4 Gene name: wbaD Gene cluster ID: AB812084 | Synthesized dimer: bDManp(1-3)aDGlcpN Status: predicted in silico
Confirmation methods: in silico ID: 2598 | Organism (ID 1961): Escherichia coli O44 Full structure (ID 3373): CSDB ID(s): 1551, 3378, 6049, 12095, 12789, 20655, 21694, 26193, 30594 Molecule role: O-antigen | |
| Enzyme name: WbaC Group: WbaC UniProt ID: Q1L822 CAZy family: GT4 Gene name: wbaC Gene cluster ID: AB812084 | Synthesized dimer: aDManp(1-2)bDManp Status: predicted in silico
Confirmation methods: in silico ID: 2599 | Organism (ID 1961): Escherichia coli O44 Full structure (ID 3373): CSDB ID(s): 1551, 3378, 6049, 12095, 12789, 20655, 21694, 26193, 30594 Molecule role: O-antigen | |
| Enzyme name: WbaC UniProt ID: Q1L822 CAZy family: GT4 Gene name: wbaC Gene cluster ID: AB812084 | Synthesized dimer: aDManp(1-2)aDManp Status: predicted in silico
Confirmation methods: in silico ID: 2600 | Organism (ID 1961): Escherichia coli O44 Full structure (ID 3373): CSDB ID(s): 1551, 3378, 6049, 12095, 12789, 20655, 21694, 26193, 30594 Molecule role: O-antigen | |
| Enzyme name: WclC Group: WbaD UniProt ID: Q4KZ34 CAZy family: GT4 Gene cluster ID: AY654590 | Synthesized dimer: bDManp(1-3)aDGlcpN Status: predicted in silico
Confirmation methods: in silico ID: 2601 | Organism (ID 8184): Escherichia coli O59 Full structure (ID 11569): CSDB ID(s): 1566, 30055, 30572 Molecule role: O-antigen | Fontana et al. 2014 DOI: 10.1093/glycob/cwu011 |
| Enzyme name: WclB UniProt ID: Q4KZ35 CAZy family: GT4 Gene cluster ID: AY654590 | Synthesized dimer: aDManp(1-3)bDManp Status: predicted in silico
Confirmation methods: in silico ID: 2602 | Organism (ID 8184): Escherichia coli O59 Full structure (ID 11569): CSDB ID(s): 1566, 30055, 30572 Molecule role: O-antigen | |
| Synthesized dimer: aDManp(1-3)aDManp Status: predicted in silico
Confirmation methods: in silico ID: 2603 | Organism (ID 8184): Escherichia coli O59 Full structure (ID 11569): CSDB ID(s): 1566, 30055, 30572 Molecule role: O-antigen | ||
| Enzyme name: WclA UniProt ID: Q4KZ25 CAZy family: GT4 Gene cluster ID: AY654590 | Synthesized dimer: aDGalpA(1-3)aDManp Status: predicted in silico
Confirmation methods: in silico ID: 2604 | Organism (ID 8184): Escherichia coli O59 Full structure (ID 11569): CSDB ID(s): 1566, 30055, 30572 Molecule role: O-antigen | |
| Enzyme name: WfaV Group: WbaD UniProt ID: A0A0A7DN61* Gene cluster ID: KJ534585 | Synthesized dimer: bDManp(1-3)aDGlcpN Status: predicted in silico
Confirmation methods: in silico ID: 2605 | Organism (ID 6655): Escherichia coli O68 Full structure (ID 11604): CSDB ID(s): 1574, 3902 Molecule role: O-antigen | Jiang et al. 2014 DOI: 10.1016/j.carres.2014.07.022 |
| Enzyme name: WceA UniProt ID: A0A0A8J523 Gene cluster ID: KJ534585 | Synthesized dimer: aDManp(1-2)bDManp Status: predicted in silico
Confirmation methods: in silico ID: 2606 | Organism (ID 6655): Escherichia coli O68 Full structure (ID 11604): CSDB ID(s): 1574, 3902 Molecule role: O-antigen | |
| Synthesized dimer: aDManp(1-2)aDManp Status: predicted in silico
Confirmation methods: in silico ID: 2607 | Organism (ID 6655): Escherichia coli O68 Full structure (ID 11604): CSDB ID(s): 1574, 3902 Molecule role: O-antigen | ||
| Synthesized dimer: aDManp(1-2)aDManp Status: predicted in silico
Confirmation methods: in silico ID: 2608 | Organism (ID 6655): Escherichia coli O68 Full structure (ID 11604): CSDB ID(s): 1574, 3902 Molecule role: O-antigen | ||
| Enzyme name: WekA UniProt ID: A0A0A8J580 Gene name: wekA Gene cluster ID: KJ534585 | Synthesized dimer: aLRhap(1-3)aDManp Status: predicted in silico
Confirmation methods: in silico ID: 2609 | Organism (ID 6655): Escherichia coli O68 Full structure (ID 11604): CSDB ID(s): 1574, 3902 Molecule role: O-antigen | |
| Enzyme name: WbaD Group: WbaD UniProt ID: Q1L815 CAZy family: GT4 Gene name: wbaD Gene cluster ID: AB812084 | Synthesized dimer: bDManp(1-3)aDGlcpN Status: predicted in silico
Confirmation methods: in silico ID: 2610 | Organism (ID 4207): Escherichia coli O73 Full structure (ID 12910): CSDB ID(s): 1578, 3385, 3643, 12790, 13070, 30344 Molecule role: O-antigen | Wang et al. 2007 DOI: 10.1099/mic.0.2007/004192-0 |
| Enzyme name: WbaC Group: WbaC UniProt ID: Q1L822 CAZy family: GT4 Gene name: wbaC Gene cluster ID: AB812084 | Synthesized dimer: aDManp(1-2)bDManp Status: predicted in silico
Confirmation methods: in silico ID: 2611 | Organism (ID 4207): Escherichia coli O73 Full structure (ID 12910): CSDB ID(s): 1578, 3385, 3643, 12790, 13070, 30344 Molecule role: O-antigen | |
| Enzyme name: WbaC UniProt ID: Q1L822 CAZy family: GT4 Gene name: wbaC Gene cluster ID: AB812084 | Synthesized dimer: aDManp(1-2)aDManp Status: predicted in silico
Confirmation methods: in silico ID: 2612 | Organism (ID 4207): Escherichia coli O73 Full structure (ID 12910): CSDB ID(s): 1578, 3385, 3643, 12790, 13070, 30344 Molecule role: O-antigen | |
| Enzyme name: WbaD Group: WbaD UniProt ID: Q1L815 CAZy family: GT4 Gene name: wbaD Gene cluster ID: AB812084 | Synthesized dimer: bDManp(1-3)aDGlcpN Status: predicted in silico
Confirmation methods: in silico ID: 2613 | Organism (ID 1918): Escherichia coli O77 Full structure (ID 3446): CSDB ID(s): 359, 1583, 2675, 11268, 12791, 20665, 21421, 25629, 27423, 30340, 105802, 105825, 108621 Molecule role: O-antigen | Iguchi et al. 2015 DOI: 10.1093/dnares/dsu043 |
| Enzyme name: WbaC UniProt ID: A0A0A0FSD8 Gene cluster ID: AB972416 | Synthesized dimer: aDManp(1-2)bDManp Status: predicted in silico
Confirmation methods: in silico ID: 2614 | Organism (ID 1918): Escherichia coli O77 Full structure (ID 3446): CSDB ID(s): 359, 1583, 2675, 11268, 12791, 20665, 21421, 25629, 27423, 30340, 105802, 105825, 108621 Molecule role: O-antigen | |
| Synthesized dimer: aDManp(1-2)aDManp Status: predicted in silico
Confirmation methods: in silico ID: 2615 | Organism (ID 1918): Escherichia coli O77 Full structure (ID 3446): CSDB ID(s): 359, 1583, 2675, 11268, 12791, 20665, 21421, 25629, 27423, 30340, 105802, 105825, 108621 Molecule role: O-antigen | ||
| Enzyme name: Orf3 Group: WbaD UniProt ID: A0A0A8J6S0 Gene cluster ID: AB812074 | Synthesized dimer: bDManp(1-3)aDGalpN Status: predicted in silico
Confirmation methods: in silico ID: 2616 | Organism (ID 4515): Escherichia coli O176 Full structure (ID 3959): CSDB ID(s): 1918, 3361, 9250, 13071, 25631, 26211, 27340, 27428, 30349, 31901, 108631, 115468 Molecule role: O-antigen | |
| Enzyme name: Orf4 UniProt ID: A0A0A8J7E1 Gene cluster ID: AB812074 | Synthesized dimer: aDManp(1-2)bDManp Status: predicted in silico
Confirmation methods: in silico ID: 2617 | Organism (ID 4515): Escherichia coli O176 Full structure (ID 3959): CSDB ID(s): 1918, 3361, 9250, 13071, 25631, 26211, 27340, 27428, 30349, 31901, 108631, 115468 Molecule role: O-antigen | |
| Synthesized dimer: aDManp(1-2)aDManp Status: predicted in silico
Confirmation methods: in silico ID: 2618 | Organism (ID 4515): Escherichia coli O176 Full structure (ID 3959): CSDB ID(s): 1918, 3361, 9250, 13071, 25631, 26211, 27340, 27428, 30349, 31901, 108631, 115468 Molecule role: O-antigen | ||
| Enzyme name: WbeY Group: WbeY UniProt ID: A0A0B1KEL3 Gene cluster ID: AB811609 | Synthesized dimer: bDGalf(1-3)aDGlcpN Status: predicted in silico
Confirmation methods: in silico ID: 2619 | Organism (ID 6645): Escherichia coli O28ac Full structure (ID 11572): CSDB ID(s): 30237 Molecule role: O-antigen | Fontana et al. 2015 DOI: 10.1016/j.carres.2014.05.003 |
| Enzyme name: WbeX UniProt ID: A0A0A8J301 Gene cluster ID: AB811609 | Synthesized dimer: bDGlcpN(1-3)bDGalf Status: predicted in silico
Confirmation methods: in silico ID: 2620 | Organism (ID 6645): Escherichia coli O28ac Full structure (ID 11572): CSDB ID(s): 30237 Molecule role: O-antigen | |
| Enzyme name: WbeS UniProt ID: A4K7Z6 Gene name: wbeS Gene cluster ID: AB811609 | Synthesized dimer: P(?-4)bDGlcpN Status: predicted in silico
Confirmation methods: in silico ID: 2621 | Organism (ID 6645): Escherichia coli O28ac Full structure (ID 11572): CSDB ID(s): 30237 Molecule role: O-antigen | |
| Enzyme name: WbeY Group: WbeY UniProt ID: B7UED4 CAZy family: GT2 Gene name: wbeY Gene cluster ID: AB811618 | Synthesized dimer: bDGalf(1-3)aDGlcpN Status: predicted in silico
Confirmation methods: in silico ID: 2622 | Organism (ID 7123): Escherichia coli O42 Full structure (ID 11570): CSDB ID(s): 1549, 11594 Molecule role: O-antigen | |
| Enzyme name: WbeX UniProt ID: B7UED3 CAZy family: GT2 Gene name: wbeX Gene cluster ID: AB811618 | Synthesized dimer: bDGlcpN(1-3)bDGalf Status: predicted in silico
Confirmation methods: in silico ID: 2623 | Organism (ID 7123): Escherichia coli O42 Full structure (ID 11570): CSDB ID(s): 1549, 11594 Molecule role: O-antigen | |
| Enzyme name: WbeS UniProt ID: A4K7Z6 Gene name: wbeS Gene cluster ID: AB811618 | Synthesized dimer: P(?-4)bDGlcpN Status: predicted in silico
Confirmation methods: in silico ID: 2624 | Organism (ID 7123): Escherichia coli O42 Full structure (ID 11570): CSDB ID(s): 1549, 11594 Molecule role: O-antigen | |
| Enzyme name: WfbU Group: WbeY UniProt ID: D8WUJ8 CAZy family: GT2 Gene name: wfb Gene cluster ID: GU299798 | Synthesized dimer: bDGalf(1-3)bDGlcpN Status: predicted in silico
Confirmation methods: in silico ID: 2625 | Organism (ID 5367): Escherichia coli O85 Full structure (ID 9758): CSDB ID(s): 1591, 3355, 3386, 30348 Molecule role: O-antigen | Perepelov et al. 2011c DOI: 10.1177/1753425910369270 |
| Enzyme name: WfbS UniProt ID: D8WUJ6 CAZy family: GT4 Gene name: wfbS Gene cluster ID: GU299798 | Synthesized dimer: bDManpN(1-6)bDGalf Status: predicted in silico
Confirmation methods: in silico ID: 2626 | Organism (ID 5367): Escherichia coli O85 Full structure (ID 9758): CSDB ID(s): 1591, 3355, 3386, 30348 Molecule role: O-antigen | |
| Enzyme name: WfbQ UniProt ID: D8WUJ3 CAZy family: GT4 Gene name: wfbQ Gene cluster ID: GU299798 | Synthesized dimer: aDGalp(1-3)bDManpN Status: predicted in silico
Confirmation methods: in silico ID: 2627 | Organism (ID 5367): Escherichia coli O85 Full structure (ID 9758): CSDB ID(s): 1591, 3355, 3386, 30348 Molecule role: O-antigen | |
| Enzyme name: WfbR UniProt ID: D8WUJ5 CAZy family: GT4 Gene name: wfbR Gene cluster ID: GU299798 | Synthesized dimer: aDGalf(1-4)aDGalp Status: predicted in silico
Confirmation methods: in silico ID: 2628 | Organism (ID 5367): Escherichia coli O85 Full structure (ID 9758): CSDB ID(s): 1591, 3355, 3386, 30348 Molecule role: O-antigen | |
| Enzyme name: Orf7 Group: WbeY UniProt ID: A0A0A8J5Y3 Gene name: glfT1 AA102_01470 Gene cluster ID: AB812043 | Synthesized dimer: bDGalf(1-3)bDGlcpN Status: predicted in silico
Confirmation methods: in silico ID: 2629 | Organism (ID 8192): Escherichia coli O96 Full structure (ID 12251): CSDB ID(s): 1600 Molecule role: O-antigen | Iguchi et al. 2015 DOI: 10.1093/dnares/dsu043 |
| Enzyme name: Orf3 UniProt ID: A0A0A8J606 Gene name: AA102_01490 Gene cluster ID: AB812043 | Synthesized dimer: bDGalf(1-4)aDGlcpA Status: predicted in silico
Confirmation methods: in silico ID: 2630 | Organism (ID 8192): Escherichia coli O96 Full structure (ID 12251): CSDB ID(s): 1600 Molecule role: O-antigen | |
| Enzyme name: WfdJ Group: WbeY UniProt ID: B5L3W4 CAZy family: GT2 Gene name: wfdJ Gene cluster ID: EU296408 | Synthesized dimer: bDGalf(1-3)bDGlcpN Status: predicted in silico
Confirmation methods: in silico ID: 2631 | Organism (ID 1537): Escherichia coli O167 Full structure (ID 2715): CSDB ID(s): 1909, 20707, 23044 Molecule role: O-antigen | Liu et al. 2008 DOI: 10.1111/j.1574-6976.2008.00114.x |
| Enzyme name: WfdI UniProt ID: B5L3W3 CAZy family: GT4 Gene name: wfdI Gene cluster ID: EU296408 | Synthesized dimer: bDGalf(1-5)bDGalf Status: predicted in silico
Confirmation methods: in silico ID: 2632 | Organism (ID 1537): Escherichia coli O167 Full structure (ID 2715): CSDB ID(s): 1909, 20707, 23044 Molecule role: O-antigen | |
| Enzyme name: WfdH UniProt ID: B5L3W1 CAZy family: GT2 Gene name: wfdH Gene cluster ID: EU296408 | Synthesized dimer: aDGlcpN(1-2)bDGalf Status: predicted in silico
Confirmation methods: in silico ID: 2633 | Organism (ID 1537): Escherichia coli O167 Full structure (ID 2715): CSDB ID(s): 1909, 20707, 23044 Molecule role: O-antigen | |
| Enzyme name: WfdG UniProt ID: B5L3W0 Gene name: wfdG Gene cluster ID: EU296408 | Synthesized dimer: bDGalpA(1-3)aDGlcpN Status: predicted in silico
Confirmation methods: in silico ID: 2634 | Organism (ID 1537): Escherichia coli O167 Full structure (ID 2715): CSDB ID(s): 1909, 20707, 23044 Molecule role: O-antigen | |
| Enzyme name: WfbF UniProt ID: B5L3V9 CAZy family: GT4 Gene name: wfbF Gene cluster ID: EU296408 | Synthesized dimer: aDGalf(1-4)bDGalpA Status: predicted in silico
Confirmation methods: in silico ID: 2635 | Organism (ID 1537): Escherichia coli O167 Full structure (ID 2715): CSDB ID(s): 1909, 20707, 23044 Molecule role: O-antigen | |
| Enzyme name: Orf7 Group: WbeY UniProt ID: A0A0A8J932 Gene cluster ID: AB812070 | Synthesized dimer: bDGalf(1-3)bDGlcpN Status: predicted in silico
Confirmation methods: in silico ID: 2636 | Organism (ID 6963): Escherichia coli O170 Full structure (ID 12011): CSDB ID(s): 1407, 1912, 11543 Molecule role: O-antigen | Shashlov et al. 2015 DOI: 10.1016/j.carres.2015.08.013 |
| Enzyme name: Orf6 UniProt ID: A0A0A8J630 Gene cluster ID: AB812070 | Synthesized dimer: bDGlcpA(1-3)bDGalf Status: predicted in silico
Confirmation methods: in silico ID: 2637 | Organism (ID 6963): Escherichia coli O170 Full structure (ID 12011): CSDB ID(s): 1407, 1912, 11543 Molecule role: O-antigen | |
| Enzyme name: Orf4 UniProt ID: A0A0A8J775 Gene cluster ID: AB812070 | Synthesized dimer: bDGlcpN(1-4)bDGlcpA Status: predicted in silico
Confirmation methods: in silico ID: 2638 | Organism (ID 6963): Escherichia coli O170 Full structure (ID 12011): CSDB ID(s): 1407, 1912, 11543 Molecule role: O-antigen | |
| Enzyme name: Orf3 UniProt ID: A0A0A8J6J9 Gene cluster ID: AB812070 | Synthesized dimer: bDGalf(1-3)bDGlcpN Status: predicted in silico
Confirmation methods: in silico ID: 2639 | Organism (ID 6963): Escherichia coli O170 Full structure (ID 12011): CSDB ID(s): 1407, 1912, 11543 Molecule role: O-antigen | |
| Enzyme name: WfeT Group: WbeT UniProt ID: B5L457 CAZy family: GT2 Gene name: wfeT Gene cluster ID: AB972420 | Synthesized dimer: bDGalf(1-3)bDGalpN Status: predicted in silico
Confirmation methods: in silico ID: 2640 | Organism (ID 2910): Escherichia coli O124 Full structure (ID 4705): CSDB ID(s): 718, 1863, 2215, 3989, 11568, 12150, 12643, 12745, 20677, 22714, 23064, 108646, 122423 Molecule role: O-antigen | Iguchi et al. 2015 DOI: 10.1093/dnares/dsu043 |
| Enzyme name: WfeS UniProt ID: A0A0A8J899 Gene cluster ID: AB972420 | Synthesized dimer: bDGalp(1-6)bDGalf Status: predicted in silico
Confirmation methods: in silico ID: 2641 | Organism (ID 2910): Escherichia coli O124 Full structure (ID 4705): CSDB ID(s): 718, 1863, 2215, 3989, 11568, 12150, 12643, 12745, 20677, 22714, 23064, 108646, 122423 Molecule role: O-antigen | |
| Enzyme name: WfeR UniProt ID: B5L453 CAZy family: GT32 Gene name: wfeR Gene cluster ID: AB972420 | Synthesized dimer: aDGlcp(1-4)bDGalp Status: predicted in silico
Confirmation methods: in silico ID: 2642 | Organism (ID 2910): Escherichia coli O124 Full structure (ID 4705): CSDB ID(s): 718, 1863, 2215, 3989, 11568, 12150, 12643, 12745, 20677, 22714, 23064, 108646, 122423 Molecule role: O-antigen | |
| Enzyme name: WfeQ UniProt ID: B5L452 CAZy family: GT2 Gene name: wfeQ Gene cluster ID: AB972420 | Synthesized dimer: bDGlcp(1-6)aDGlcp Status: predicted in silico
Confirmation methods: in silico ID: 2643 | Organism (ID 2910): Escherichia coli O124 Full structure (ID 4705): CSDB ID(s): 718, 1863, 2215, 3989, 11568, 12150, 12643, 12745, 20677, 22714, 23064, 108646, 122423 Molecule role: O-antigen | |
| Enzyme name: WclR Group: WclR UniProt ID: B5T072 CAZy family: GT4 Gene name: wclR Gene cluster ID: EU694097 | Synthesized dimer: aDGalp(1-3)bDGlcpN Status: predicted in silico
Confirmation methods: in silico ID: 2644 | Organism (ID 2446): Escherichia coli O3 Full structure (ID 4178): CSDB ID(s): 1501, 2213, 10304, 11291, 12189, 20634, 124553 Molecule role: O-antigen | Ren et al. 2008 DOI: 10.1016/j.mimet.2008.07.010 |
| Enzyme name: WclU UniProt ID: B5T079 CAZy family: GT2 Gene name: wclU Gene cluster ID: EU694097 | Synthesized dimer: bDGlcpN(1-3)aDGalp Status: predicted in silico
Confirmation methods: in silico ID: 2645 | Organism (ID 2446): Escherichia coli O3 Full structure (ID 4178): CSDB ID(s): 1501, 2213, 10304, 11291, 12189, 20634, 124553 Molecule role: O-antigen | |
| Enzyme name: WclS UniProt ID: B5T074 CAZy family: GT2 Gene name: wclS Gene cluster ID: EU694097 | Synthesized dimer: bLRhapN(1-4)bDGlcpN Status: predicted in silico
Confirmation methods: in silico ID: 2646 | Organism (ID 2446): Escherichia coli O3 Full structure (ID 4178): CSDB ID(s): 1501, 2213, 10304, 11291, 12189, 20634, 124553 Molecule role: O-antigen | |
| Enzyme name: WclV UniProt ID: B5T080 CAZy family: GT4 Gene name: wclV Gene cluster ID: EU694097 | Synthesized dimer: aDGlcp(1-4)aDGalp Status: predicted in silico
Confirmation methods: in silico ID: 2647 | Organism (ID 2446): Escherichia coli O3 Full structure (ID 4178): CSDB ID(s): 1501, 2213, 10304, 11291, 12189, 20634, 124553 Molecule role: O-antigen | |
| Enzyme name: Orf11 Group: WclR UniProt ID: A0A0A8J2N3 Gene name: pglA Gene cluster ID: AB811599 | Synthesized dimer: aDGalp(1-3)bDGlcpN Status: predicted in silico
Confirmation methods: in silico ID: 2648 | Organism (ID 2920): Escherichia coli O10 Full structure (ID 4725): CSDB ID(s): 1512, 20642, 108670 Molecule role: O-antigen | Iguchi et al. 2015 DOI: 10.1093/dnares/dsu043 |
| Enzyme name: Orf10 UniProt ID: A0A0A8J3Q3 Gene cluster ID: AB811599 | Synthesized dimer: aLRhap(1-3)aDGalp Status: predicted in silico
Confirmation methods: in silico ID: 2649 | Organism (ID 2920): Escherichia coli O10 Full structure (ID 4725): CSDB ID(s): 1512, 20642, 108670 Molecule role: O-antigen | |
| Enzyme name: Orf8 UniProt ID: A0A0A8J337 Gene name: rfbF Gene cluster ID: AB811599 | Synthesized dimer: aLRhap(1-3)aLRhap Status: predicted in silico
Confirmation methods: in silico ID: 2650 | Organism (ID 2920): Escherichia coli O10 Full structure (ID 4725): CSDB ID(s): 1512, 20642, 108670 Molecule role: O-antigen | |
| Enzyme name: Orf7 UniProt ID: A0A0A8J5K2 Gene name: wavQ Gene cluster ID: AB811599 | Synthesized dimer: aDFucp4N(1-2)aLRhap Status: predicted in silico
Confirmation methods: in silico ID: 2651 | Organism (ID 2920): Escherichia coli O10 Full structure (ID 4725): CSDB ID(s): 1512, 20642, 108670 Molecule role: O-antigen | |
| Enzyme name: WekW Group: WclR UniProt ID: D7PDW8 CAZy family: GT4 Gene name: wekW Gene cluster ID: AB811603 | Synthesized dimer: aDGalp(1-3)aDGlcpN Status: predicted in silico
Confirmation methods: in silico ID: 2652 | Organism (ID 3240): Escherichia coli O18ac Full structure (ID 4731): CSDB ID(s): 1521, 10404, 32216, 108679, 115778, 124042 Molecule role: O-antigen | |
| Enzyme name: WekV UniProt ID: D7PDW7 CAZy family: GT4 Gene name: wekV Gene cluster ID: AB811603 | Synthesized dimer: aDGlcp(1-4)aDGalp Status: predicted in silico
Confirmation methods: in silico ID: 2653 | Organism (ID 3240): Escherichia coli O18ac Full structure (ID 4731): CSDB ID(s): 1521, 10404, 32216, 108679, 115778, 124042 Molecule role: O-antigen | |
| Enzyme name: WekT UniProt ID: A0A0A8J5P8 Gene cluster ID: AB811603 | Synthesized dimer: aLRhap(1-6)aDGlcp Status: predicted in silico
Confirmation methods: in silico ID: 2654 | Organism (ID 3240): Escherichia coli O18ac Full structure (ID 4731): CSDB ID(s): 1521, 10404, 32216, 108679, 115778, 124042 Molecule role: O-antigen | |
| Enzyme name: WekU UniProt ID: D7PDW6 CAZy family: GT2 Gene name: wekU Gene cluster ID: AB811603 | Synthesized dimer: bDGlcpN(1-3)aDGalp Status: predicted in silico
Confirmation methods: in silico ID: 2655 | Organism (ID 3240): Escherichia coli O18ac Full structure (ID 4731): CSDB ID(s): 1521, 10404, 32216, 108679, 115778, 124042 Molecule role: O-antigen | |
| Enzyme name: WffO Group: WclR UniProt ID: B5L431 CAZy family: GT4 Gene name: wffO Gene cluster ID: EU296417 | Synthesized dimer: aDGalp(1-3)bDGlcpN Status: predicted in silico
Confirmation methods: in silico ID: 2656 | Organism (ID 4189): Escherichia coli O40 Full structure (ID 7303): CSDB ID(s): 1547, 3831, 11571, 23075 Molecule role: O-antigen | Liu et al. 2008 DOI: 10.1111/j.1574-6976.2008.00114.x |
| Enzyme name: WffP UniProt ID: B5L432 CAZy family: GT25 Gene name: wffP Gene cluster ID: EU296417 | Synthesized dimer: bDManp(1-4)aDGalp Status: predicted in silico
Confirmation methods: in silico ID: 2657 | Organism (ID 4189): Escherichia coli O40 Full structure (ID 7303): CSDB ID(s): 1547, 3831, 11571, 23075 Molecule role: O-antigen | |
| Enzyme name: WffQ UniProt ID: B5L434 CAZy family: GT4 Gene name: wffQ Gene cluster ID: EU296417 | Synthesized dimer: bDGalp(1-4)bDManp Status: predicted in silico
Confirmation methods: in silico ID: 2658 | Organism (ID 4189): Escherichia coli O40 Full structure (ID 7303): CSDB ID(s): 1547, 3831, 11571, 23075 Molecule role: O-antigen | |
| Enzyme name: Orf11 Group: WclR UniProt ID: A0A0A8J4K5 Gene name: epsD Gene cluster ID: AB812028 | Synthesized dimer: aDGalp(1-3)bDGlcpN Status: predicted in silico
Confirmation methods: in silico ID: 2659 | Organism (ID 2938): Escherichia coli O69 Full structure (ID 4748): CSDB ID(s): 20662, 108700 Molecule role: O-antigen | Iguchi et al. 2015 DOI: 10.1093/dnares/dsu043 |
| Enzyme name: Orf10 UniProt ID: A0A0A8J751 Gene cluster ID: AB812028 | Synthesized dimer: aLRhap(1-2)aDGalp Status: predicted in silico
Confirmation methods: in silico ID: 2660 | Organism (ID 2938): Escherichia coli O69 Full structure (ID 4748): CSDB ID(s): 20662, 108700 Molecule role: O-antigen | |
| Synthesized dimer: aLRhap(1-2)aLRhap Status: predicted in silico
Confirmation methods: in silico ID: 2661 | Organism (ID 2938): Escherichia coli O69 Full structure (ID 4748): CSDB ID(s): 20662, 108700 Molecule role: O-antigen | ||
| Enzyme name: Orf8 UniProt ID: A0A0A8J594 Gene name: wfgH Gene cluster ID: AB812028 | Synthesized dimer: bDGlcpN(1-2)aLRhap Status: predicted in silico
Confirmation methods: in silico ID: 2662 | Organism (ID 2938): Escherichia coli O69 Full structure (ID 4748): CSDB ID(s): 20662, 108700 Molecule role: O-antigen | |
| Enzyme name: Orf10 Group: WclR UniProt ID: A0A0A8J649 Gene cluster ID: AB812045 | Synthesized dimer: aDGalp(1-3)bDGlcpN Status: predicted in silico
Confirmation methods: in silico ID: 2663 | Organism (ID 3427): Escherichia coli O100 Full structure (ID 12289): CSDB ID(s): 1838 Molecule role: O-antigen | |
| Enzyme name: Orf9 UniProt ID: A0A0B0Z3I8 Gene cluster ID: AB812045 | Synthesized dimer: aLRhap(1-3)aDGalp Status: predicted in silico
Confirmation methods: in silico ID: 2664 | Organism (ID 3427): Escherichia coli O100 Full structure (ID 12289): CSDB ID(s): 1838 Molecule role: O-antigen | |
| Synthesized dimer: aLRhap(1-3)aLRhap Status: predicted in silico
Confirmation methods: in silico ID: 2665 | Organism (ID 3427): Escherichia coli O100 Full structure (ID 12289): CSDB ID(s): 1838 Molecule role: O-antigen | ||
| Enzyme name: Orf7 UniProt ID: A0A0A8J7Z0 Gene name: tagF Gene cluster ID: AB812045 | Synthesized dimer: P(?-3)aLRhap Status: predicted in silico
Confirmation methods: in silico ID: 2666 | Organism (ID 3427): Escherichia coli O100 Full structure (ID 12289): CSDB ID(s): 1838 Molecule role: O-antigen | |
| Enzyme name: Orf1 Group: WclR UniProt ID: A0A0A8J6C5 Gene cluster ID: AB812049 | Synthesized dimer: aDGalp(1-3)bDGlcpN Status: predicted in silico
Confirmation methods: in silico ID: 2667 | Organism (ID 6560): Escherichia coli O110 Full structure (ID 11384): CSDB ID(s): 1849 Molecule role: O-antigen | Perepelov et al. 2013a DOI: 10.1016/j.carres.2012.11.015 |
| Enzyme name: WbnE Group: WclR UniProt ID: Q9RP57 CAZy family: GT4 Gene name: wbnE Gene cluster ID: AF172324 | Synthesized dimer: aDGalp(1-3)bDGlcpN Status: predicted in silico
Confirmation methods: in silico ID: 2668 | Organism (ID 1715): Escherichia coli O113 Full structure (ID 3015): CSDB ID(s): 1853, 4023, 20673, 24241, 27302 Molecule role: O-antigen | Paton et al. 1999 |
| Enzyme name: WbnB UniProt ID: Q9RP60 CAZy family: GT4 Gene name: wbnB Gene cluster ID: AF172324 | Synthesized dimer: aDGalpA(1-3)aDGalp Status: predicted in silico
Confirmation methods: in silico ID: 2669 | Organism (ID 1715): Escherichia coli O113 Full structure (ID 3015): CSDB ID(s): 1853, 4023, 20673, 24241, 27302 Molecule role: O-antigen | |
| Enzyme name: WbnD UniProt ID: Q9RP58 CAZy family: GT4 Gene name: wbnD Gene cluster ID: AF172324 | Synthesized dimer: aDGalpN(1-4)aDGalpA Status: predicted in silico
Confirmation methods: in silico ID: 2670 | Organism (ID 1715): Escherichia coli O113 Full structure (ID 3015): CSDB ID(s): 1853, 4023, 20673, 24241, 27302 Molecule role: O-antigen | |
| Enzyme name: WbnA UniProt ID: Q9RP62 CAZy family: GT2 Gene name: wbnA Gene cluster ID: AF172324 | Synthesized dimer: bDGalp(1-3)aDGalpN Status: predicted in silico
Confirmation methods: in silico ID: 2671 | Organism (ID 1715): Escherichia coli O113 Full structure (ID 3015): CSDB ID(s): 1853, 4023, 20673, 24241, 27302 Molecule role: O-antigen | |
| Enzyme name: WbhP Group: WbhP UniProt ID: A7J0P7 CAZy family: GT4 Gene name: wbhP Gene cluster ID: AB811606 | Synthesized dimer: aDGalp(1-3)bDGalpN Status: predicted in silico
Confirmation methods: in silico ID: 2672 | Organism (ID 3360): Escherichia coli O22 Full structure (ID 5453): CSDB ID(s): 1530, 26493, 30796, 117663 Molecule role: O-antigen | Iguchi et al. 2015 DOI: 10.1093/dnares/dsu043 |
| Enzyme name: WbhQ UniProt ID: A7J0P8 CAZy family: GT2 Gene name: wbhQ Gene cluster ID: AB811606 | Synthesized dimer: bDGalpN(1-3)aDGalp Status: predicted in silico
Confirmation methods: in silico ID: 2673 | Organism (ID 3360): Escherichia coli O22 Full structure (ID 5453): CSDB ID(s): 1530, 26493, 30796, 117663 Molecule role: O-antigen | |
| Enzyme name: WbhR UniProt ID: A7J0P9 CAZy family: GT2 Gene name: wbhR Gene cluster ID: AB811606 | Synthesized dimer: bDGlcpA(1-4)bDGalpN Status: predicted in silico
Confirmation methods: in silico ID: 2674 | Organism (ID 3360): Escherichia coli O22 Full structure (ID 5453): CSDB ID(s): 1530, 26493, 30796, 117663 Molecule role: O-antigen | |
| Enzyme name: WbhT UniProt ID: A0A0A8J424 Gene cluster ID: AB811606 | Synthesized dimer: aDGlcp(1-4)bDGlcpA Status: predicted in silico
Confirmation methods: in silico ID: 2675 | Organism (ID 3360): Escherichia coli O22 Full structure (ID 5453): CSDB ID(s): 1530, 26493, 30796, 117663 Molecule role: O-antigen | |
| Enzyme name: WbgM Group: WbhP UniProt ID: Q8VQ50 CAZy family: GT4 Gene name: wbgM Gene cluster ID: AF461121 | Synthesized dimer: aDGalp(1-3)bDGalpN Status: predicted in silico
Confirmation methods: in silico ID: 2676 | Organism (ID 446): Escherichia coli O55 Full structure (ID 799): CSDB ID(s): 1562, 2218, 2369, 7239, 12676, 13080, 20658, 24242, 27445, 28398, 30374, 108629, 113595 Molecule role: O-antigen | Wang et al. 2002 DOI: 10.1128/JB.184.10.2620-2625.2002 |
| Enzyme name: WbgP UniProt ID: Q8VQ42 CAZy family: GT2 Gene name: wbgP Gene cluster ID: AF461121 | Synthesized dimer: bDGalp(1-3)bDGlcpN Status: predicted in silico
Confirmation methods: in silico ID: 2677 Notes: revised data (WbgO and WbgP were later reassigned vice-versa as compared to original assigment). | Organism (ID 446): Escherichia coli O55 Full structure (ID 799): CSDB ID(s): 1562, 2218, 2369, 7239, 12676, 13080, 20658, 24242, 27445, 28398, 30374, 108629, 113595 Molecule role: O-antigen | |
| Enzyme name: WbgO UniProt ID: Q8VQ43 CAZy family: GT2 Gene name: wbgO Gene cluster ID: AF461121 | Synthesized dimer: bDGlcpN(1-3)aDGalp Status: predicted in silico
Confirmation methods: in silico ID: 2678 Notes: revised data (WbgO and WbgP were later reassigned vice-versa as compared to original assigment). | Organism (ID 446): Escherichia coli O55 Full structure (ID 799): CSDB ID(s): 1562, 2218, 2369, 7239, 12676, 13080, 20658, 24242, 27445, 28398, 30374, 108629, 113595 Molecule role: O-antigen | |
| Enzyme name: WbgN UniProt ID: Q8VQ46 CAZy family: GT11 Gene name: wbgN Gene cluster ID: AF461121 | Synthesized dimer: aColp(1-2)bDGalp Status: predicted in silico
Confirmation methods: in silico ID: 2679 | Organism (ID 446): Escherichia coli O55 Full structure (ID 799): CSDB ID(s): 1562, 2218, 2369, 7239, 12676, 13080, 20658, 24242, 27445, 28398, 30374, 108629, 113595 Molecule role: O-antigen | |
| Enzyme name: WbdH Group: WbhP UniProt ID: Q9S523 CAZy family: GT4 Gene name: wbdH Gene cluster ID: AF078736 | Synthesized dimer: aDGalp(1-3)aDGlcpN Status: predicted in silico
Confirmation methods: in silico ID: 2680 | Organism (ID 532): Escherichia coli O111 Full structure (ID 1335): CSDB ID(s): 8633 Molecule role: O-antigen | Wang et al. 1998b |
| Enzyme name: WdbL UniProt ID: Q9S520 CAZy family: GT2 Gene name: wdbL Gene cluster ID: AF078736 | Synthesized dimer: aDGlcp(1-4)aDGalp Status: predicted in silico
Confirmation methods: in silico ID: 2681 | Organism (ID 532): Escherichia coli O111 Full structure (ID 1335): CSDB ID(s): 8633 Molecule role: O-antigen | |
| Enzyme name: Orf11 Group: WbhP UniProt ID: A0A061LQK4 Gene cluster ID: AB812052 | Synthesized dimer: aDGalp(1-3)bDGalpN Status: predicted in silico
Confirmation methods: in silico ID: 2682 | Organism (ID 7344): Escherichia coli O120 Full structure (ID 10743): CSDB ID(s): 1860, 3904, 11942 Molecule role: O-antigen | Perepelov et al. 2012 DOI: 10.1016/j.carres.2012.03.022 |
| Enzyme name: Orf10 UniProt ID: A0A0A8J5T3 Gene cluster ID: AB812052 | Synthesized dimer: aLRhap(1-2)aDGalp Status: predicted in silico
Confirmation methods: in silico ID: 2683 | Organism (ID 7344): Escherichia coli O120 Full structure (ID 10743): CSDB ID(s): 1860, 3904, 11942 Molecule role: O-antigen | |
| Synthesized dimer: aLRhap(1-2)aLRhap Status: predicted in silico
Confirmation methods: in silico ID: 2684 | Organism (ID 7344): Escherichia coli O120 Full structure (ID 10743): CSDB ID(s): 1860, 3904, 11942 Molecule role: O-antigen | ||
| Enzyme name: Orf9 UniProt ID: A0A061LHI2 Gene cluster ID: AB812052 | Synthesized dimer: aDGlcpA(1-2)aLRhap Status: predicted in silico
Confirmation methods: in silico ID: 2685 | Organism (ID 7344): Escherichia coli O120 Full structure (ID 10743): CSDB ID(s): 1860, 3904, 11942 Molecule role: O-antigen | |
| Enzyme name: Orf7 UniProt ID: A0A0A8J6G2 Gene cluster ID: AB812052 | Synthesized dimer: aLRhap(1-4)aDGlcpA Status: predicted in silico
Confirmation methods: in silico ID: 2686 | Organism (ID 7344): Escherichia coli O120 Full structure (ID 10743): CSDB ID(s): 1860, 3904, 11942 Molecule role: O-antigen | |
| Enzyme name: WbsH Group: WbhP UniProt ID: Q6XQ61 CAZy family: GT4 Gene name: wbsH Gene cluster ID: AY217096 | Synthesized dimer: aDGalp(1-3)bDGalpN Status: predicted in silico
Confirmation methods: in silico ID: 2687 | Organism (ID 8196): Escherichia coli O128ac Full structure (ID 984): CSDB ID(s): 1867, 2367, 7240, 8302, 20681, 22685, 22801, 26277 Molecule role: O-antigen | Shao et al. 2003 DOI: 10.1016/S0014-5793(03)00980-3 |
| Enzyme name: WbsL UniProt ID: Q6XQ51 Gene name: wbsL Gene cluster ID: AY217096 | Synthesized dimer: bDGalpN(1-4)aDGalp Status: predicted in silico
Confirmation methods: in silico ID: 2688 | Organism (ID 8196): Escherichia coli O128ac Full structure (ID 984): CSDB ID(s): 1867, 2367, 7240, 8302, 20681, 22685, 22801, 26277 Molecule role: O-antigen | |
| Enzyme name: WbsK UniProt ID: Q6XQ52 CAZy family: GT2 Gene name: wbsK Gene cluster ID: AY217096 | Synthesized dimer: bDGalp(1-3)bDGalpN Status: predicted in silico
Confirmation methods: in silico ID: 2689 | Organism (ID 8196): Escherichia coli O128ac Full structure (ID 984): CSDB ID(s): 1867, 2367, 7240, 8302, 20681, 22685, 22801, 26277 Molecule role: O-antigen | |
| Enzyme name: WbsJ UniProt ID: Q6XQ53 CAZy family: GT11 Gene name: wbsJ Gene cluster ID: AY217096 | Synthesized dimer: aLFucp(1-2)bDGalp Status: predicted in silico
Confirmation methods: in silico ID: 2690 | Organism (ID 8196): Escherichia coli O128ac Full structure (ID 984): CSDB ID(s): 1867, 2367, 7240, 8302, 20681, 22685, 22801, 26277 Molecule role: O-antigen | |
| Enzyme name: WbbD Group: WbbD UniProt ID: Q03084 CAZy family: GT2 Gene name: wbbD Gene cluster ID: AF125322 | Synthesized dimer: bDGalp(1-3)aDGlcpN Status: predicted in silico
Confirmation methods: in silico ID: 2691 | Organism (ID 153): Escherichia coli O7 Full structure (ID 274): CSDB ID(s): 1385, 1508, 2162, 2719, 7494, 10463, 10610, 10871, 11786, 20641, 23054, 29648, 30268, 108701, 116994 Molecule role: O-antigen | Marolda et al. 1999 DOI: 10.1099/00221287-145-9-2485 |
| Enzyme name: WbbC UniProt ID: Q9XCV9 CAZy family: GT4 Gene name: wbbC Gene cluster ID: AF125322 | Synthesized dimer: aDManp(1-4)bDGalp Status: predicted in silico
Confirmation methods: in silico ID: 2692 | Organism (ID 153): Escherichia coli O7 Full structure (ID 274): CSDB ID(s): 1385, 1508, 2162, 2719, 7494, 10463, 10610, 10871, 11786, 20641, 23054, 29648, 30268, 108701, 116994 Molecule role: O-antigen | |
| Enzyme name: WbbB UniProt ID: Q9XCW1 Gene name: wbbB Gene cluster ID: AF125322 | Synthesized dimer: bDQuip4N(1-2)aDManp Status: predicted in silico
Confirmation methods: in silico ID: 2693 | Organism (ID 153): Escherichia coli O7 Full structure (ID 274): CSDB ID(s): 1385, 1508, 2162, 2719, 7494, 10463, 10610, 10871, 11786, 20641, 23054, 29648, 30268, 108701, 116994 Molecule role: O-antigen | |
| Enzyme name: WbbA UniProt ID: Q9XCW2 Gene name: wbbA Gene cluster ID: AF125322 | Synthesized dimer: aLRhap(1-3)aDManp Status: predicted in silico
Confirmation methods: in silico ID: 2694 | Organism (ID 153): Escherichia coli O7 Full structure (ID 274): CSDB ID(s): 1385, 1508, 2162, 2719, 7494, 10463, 10610, 10871, 11786, 20641, 23054, 29648, 30268, 108701, 116994 Molecule role: O-antigen | |
| Enzyme name: Orf2 Group: WbbD UniProt ID: A0A0A8J402 Gene name: ERS085374_05240,ERS139269_05248 Gene cluster ID: AB812025 | Synthesized dimer: bDGalp(1-3)bDGlcpN Status: predicted in silico
Confirmation methods: in silico ID: 2695 | Organism (ID 2937): Escherichia coli O64 Full structure (ID 4747): CSDB ID(s): 1571, 108699, 117393 Molecule role: O-antigen | Iguchi et al. 2015 DOI: 10.1093/dnares/dsu043 |
| Enzyme name: Orf6 UniProt ID: A0A0A8J549 Gene cluster ID: AB812025 | Synthesized dimer: bDGlcpA(1-3)bDGalp Status: predicted in silico
Confirmation methods: in silico ID: 2696 | Organism (ID 2937): Escherichia coli O64 Full structure (ID 4747): CSDB ID(s): 1571, 108699, 117393 Molecule role: O-antigen | |
| Enzyme name: Orf5 UniProt ID: A0A0A8J514 Gene cluster ID: AB812025 | Synthesized dimer: bDGalp(1-6)bDGalp Status: predicted in silico
Confirmation methods: in silico ID: 2697 | Organism (ID 2937): Escherichia coli O64 Full structure (ID 4747): CSDB ID(s): 1571, 108699, 117393 Molecule role: O-antigen | |
| Enzyme name: WbuP Group: WbbD UniProt ID: Q697D6 CAZy family: GT2 Gene name: wbuP Gene cluster ID: AY573377 | Synthesized dimer: bDGalp(1-3)aDGlcpN Status: predicted in silico
Confirmation methods: in silico ID: 2698 | Organism (ID 1096): Escherichia coli O114 Full structure (ID 1814): CSDB ID(s): 1854, 20674, 21147, 22457, 25584, 28333, 29401, 108673, 122750, 137911 Molecule role: O-antigen | Feng et al. 2004 DOI: 10.1128/JCM.42.8.3799-3804.2004 |
| Enzyme name: WbuM UniProt ID: Q697E0 CAZy family: GT2 Gene name: wbuM Gene cluster ID: AY573377 | Synthesized dimer: bDQuip3N(1-3)bDRibf Status: predicted in silico
Confirmation methods: in silico ID: 2699 | Organism (ID 1096): Escherichia coli O114 Full structure (ID 1814): CSDB ID(s): 1854, 20674, 21147, 22457, 25584, 28333, 29401, 108673, 122750, 137911 Molecule role: O-antigen | |
| Enzyme name: Orf5 Group: WbbD UniProt ID: A0A0A8J672 Gene name: amsE Gene cluster ID: AB812063 | Synthesized dimer: bDGalp(1-3)aDGlcpN Status: predicted in silico
Confirmation methods: in silico ID: 2700 | Organism (ID 3381): Escherichia coli O153 Full structure (ID 5483): CSDB ID(s): 1894, 3364, 3907, 20706, 22813, 27448, 30378 Molecule role: O-antigen | Iguchi et al. 2015 DOI: 10.1093/dnares/dsu043 |
| Enzyme name: Orf13 Group: WbbD UniProt ID: A0A0A8J3L8 Gene name: amsE Gene cluster ID: AB811596 | Synthesized dimer: bDGalp(1-3)aDGalpN Status: predicted in silico
Confirmation methods: in silico ID: 2701 | Organism (ID 1566): Escherichia coli O5 Full structure (ID 2736): CSDB ID(s): 1504, 3191, 10870, 20637, 26259, 26609, 28672, 29760, 30353, 30559 Molecule role: O-antigen | |
| Enzyme name: Orf10 UniProt ID: A0A0A8J5G8 Gene name: wfgD Gene cluster ID: AB811596 | Synthesized dimer: bDQuip3N(1-3)bDRibf Status: predicted in silico
Confirmation methods: in silico ID: 2702 | Organism (ID 1566): Escherichia coli O5 Full structure (ID 2736): CSDB ID(s): 1504, 3191, 10870, 20637, 26259, 26609, 28672, 29760, 30353, 30559 Molecule role: O-antigen | |
| Enzyme name: Orf5 Group: WbbD UniProt ID: A0A0A8J5X6 Gene name: epsE Gene cluster ID: AB811607 | Synthesized dimer: bDGalp(1-3)aDGalpN Status: predicted in silico
Confirmation methods: in silico ID: 2703 | Organism (ID 2930): Escherichia coli O23 Full structure (ID 6848): CSDB ID(s): 20006, 26906, 30377 Molecule role: O-antigen | Cheng et al. 2006b |
| Enzyme name: Orf4 UniProt ID: A0A0A8J2Y1 Gene cluster ID: AB811607 | Synthesized dimer: aDGlcp(1-4)bDGalp Status: predicted in silico
Confirmation methods: in silico ID: 2704 | Organism (ID 2930): Escherichia coli O23 Full structure (ID 6848): CSDB ID(s): 20006, 26906, 30377 Molecule role: O-antigen | |
| Enzyme name: Orf2 UniProt ID: A0A0A8J3Z6 Gene name: pglI Gene cluster ID: AB811607 | Synthesized dimer: bDGlcpN(1-6)aDGlcp Status: predicted in silico
Confirmation methods: in silico ID: 2705 | Organism (ID 2930): Escherichia coli O23 Full structure (ID 6848): CSDB ID(s): 20006, 26906, 30377 Molecule role: O-antigen | |
| Enzyme name: Orf11 Group: WbbD UniProt ID: A0A0A8J378 Gene cluster ID: AB811614 | Synthesized dimer: bDGalp(1-3)bDGalpN Status: predicted in silico
Confirmation methods: in silico ID: 2706 | Organism (ID 8179): Escherichia coli O37 Full structure (ID 12288): CSDB ID(s): 1544, 3837 Molecule role: O-antigen | Iguchi et al. 2015 DOI: 10.1093/dnares/dsu043 |
| Enzyme name: Orf10 UniProt ID: A0A0A8J4D5 Gene name: gtf1 Gene cluster ID: AB811614 | Synthesized dimer: aDGalp(1-4)bDGalp Status: predicted in silico
Confirmation methods: in silico ID: 2707 | Organism (ID 8179): Escherichia coli O37 Full structure (ID 12288): CSDB ID(s): 1544, 3837 Molecule role: O-antigen | |
| Enzyme name: Orf9 UniProt ID: A0A0A8J4A0 Gene cluster ID: AB811614 | Synthesized dimer: bDGalpN(1-3)aDGalp Status: predicted in silico
Confirmation methods: in silico ID: 2708 | Organism (ID 8179): Escherichia coli O37 Full structure (ID 12288): CSDB ID(s): 1544, 3837 Molecule role: O-antigen | |
| Enzyme name: Orf11 Group: WbbD UniProt ID: E6ZDM5 Gene cluster ID: AB812029 | Synthesized dimer: bDGalp(1-3)aDGalpN Status: predicted in silico
Confirmation methods: in silico ID: 2709 | Organism (ID 8187): Escherichia coli O70 Full structure (ID 9068): CSDB ID(s): 1576 Molecule role: O-antigen | |
| Enzyme name: Orf9 UniProt ID: A0A0A8J5B2 Gene cluster ID: AB812029 | Synthesized dimer: aDFucp(1-3)bDGalp Status: predicted in silico
Confirmation methods: in silico ID: 2710 | Organism (ID 8187): Escherichia coli O70 Full structure (ID 9068): CSDB ID(s): 1576 Molecule role: O-antigen | |
| Enzyme name: Orf7 UniProt ID: A0A0A8J4L6 Gene cluster ID: AB812029 | Synthesized dimer: bDQuip3N(1-3)aDFucp Status: predicted in silico
Confirmation methods: in silico ID: 2711 | Organism (ID 8187): Escherichia coli O70 Full structure (ID 9068): CSDB ID(s): 1576 Molecule role: O-antigen | |
| Enzyme name: WdaK Group: WbbD UniProt ID: D7PFB9 CAZy family: GT2 Gene name: wdaK Gene cluster ID: GU445927 | Synthesized dimer: bDGalp(1-3)aDGalpN Status: predicted in silico
Confirmation methods: in silico ID: 2712 | Organism (ID 4869): Escherichia coli O71 Full structure (ID 8948): CSDB ID(s): 3384, 25758, 30145 Molecule role: O-antigen | Hu et al. 2010 DOI: 10.1111/j.1574-695X.2010.00676.x |
| Enzyme name: WdaM UniProt ID: D7PFC6 CAZy family: GT2 Gene name: wdaM Gene cluster ID: GU445927 | Synthesized dimer: aLRhap(1-4)bDGalp Status: predicted in silico
Confirmation methods: in silico ID: 2713 | Organism (ID 4869): Escherichia coli O71 Full structure (ID 8948): CSDB ID(s): 3384, 25758, 30145 Molecule role: O-antigen | |
| Enzyme name: WdaN UniProt ID: D7PFC4 Gene name: wdaN Gene cluster ID: GU445927 | Synthesized dimer: aDQuip3N(1-3)aLRhap Status: predicted in silico
Confirmation methods: in silico ID: 2714 | Organism (ID 4869): Escherichia coli O71 Full structure (ID 8948): CSDB ID(s): 3384, 25758, 30145 Molecule role: O-antigen | |
| Enzyme name: WclY Group: WbbD UniProt ID: B8QSK0 CAZy family: GT4 Gene name: wclY Gene cluster ID: EU694095 | Synthesized dimer: bDGalp(1-3)aDGalpN Status: predicted in silico
Confirmation methods: in silico ID: 2718 | Organism (ID 4757): Escherichia coli O107 Full structure (ID 14742): CSDB ID(s): 1846, 5056, 27352 Molecule role: O-antigen | Wang et al. 2009 DOI: 10.1111/j.1574-695X.2008.00494.x |
| Enzyme name: WclY UniProt ID: B8QSK0 CAZy family: GT4 Gene name: wclY Gene cluster ID: EU694095 | Synthesized dimer: aDGlcpN(1-4)bDGalp Status: predicted in silico
Confirmation methods: in silico ID: 2719 | Organism (ID 4757): Escherichia coli O107 Full structure (ID 14742): CSDB ID(s): 1846, 5056, 27352 Molecule role: O-antigen | |
| Enzyme name: WclW UniProt ID: B8QSJ8 CAZy family: GT2 Gene name: wclW Gene cluster ID: EU694095 | Synthesized dimer: bDGalpN(1-3)aLRhap Status: predicted in silico
Confirmation methods: in silico ID: 2721 | Organism (ID 4757): Escherichia coli O107 Full structure (ID 14742): CSDB ID(s): 1846, 5056, 27352 Molecule role: O-antigen | |
| Enzyme name: WfeJ Group: WbbD UniProt ID: B5L3S8 CAZy family: GT2 Gene name: wfeJ Gene cluster ID: AB812050 | Synthesized dimer: bDGalp(1-3)bDGalpN Status: predicted in silico
Confirmation methods: in silico ID: 2722 | Organism (ID 4479): Escherichia coli O112ac Full structure (ID 7907): CSDB ID(s): 1869, 9153, 23063 Molecule role: O-antigen | Iguchi et al. 2015 DOI: 10.1093/dnares/dsu043 |
| Enzyme name: WfeK UniProt ID: B5L3S9 CAZy family: GT4 Gene name: wfeK Gene cluster ID: AB812050 | Synthesized dimer: aDGlcp(1-4)bDGalp Status: predicted in silico
Confirmation methods: in silico ID: 2723 | Organism (ID 4479): Escherichia coli O112ac Full structure (ID 7907): CSDB ID(s): 1869, 9153, 23063 Molecule role: O-antigen | |
| Enzyme name: WfeL UniProt ID: B5L3T1 CAZy family: GT4 Gene name: wfeL Gene cluster ID: AB812050 | Synthesized dimer: aDGalpN(1-4)aDGlcp Status: predicted in silico
Confirmation methods: in silico ID: 2724 | Organism (ID 4479): Escherichia coli O112ac Full structure (ID 7907): CSDB ID(s): 1869, 9153, 23063 Molecule role: O-antigen | |
| Enzyme name: WfeM UniProt ID: B5L3T2 CAZy family: GT2 Gene name: wfeM Gene cluster ID: AB812050 | Synthesized dimer: bDGlcpN(1-3)aDGalpN Status: predicted in silico
Confirmation methods: in silico ID: 2725 | Organism (ID 4479): Escherichia coli O112ac Full structure (ID 7907): CSDB ID(s): 1869, 9153, 23063 Molecule role: O-antigen | |
| Enzyme name: WbeD Group: WbbD UniProt ID: A6M9B8 CAZy family: GT2 Gene name: wbeD Gene cluster ID: DQ465247 | Synthesized dimer: bDGalp(1-3)aDGalpN Status: predicted in silico
Confirmation methods: in silico ID: 2726 | Organism (ID 4054): Escherichia coli O117 Full structure (ID 2704): CSDB ID(s): 1857, 3145, 20704, 21517, 28683, 32135 Molecule role: O-antigen | Wang et al. 2009 DOI: 10.1111/j.1574-695X.2008.00494.x |
| Enzyme name: WbeC UniProt ID: A6M9B7 CAZy family: GT4 Gene name: wbeC Gene cluster ID: DQ465247 | Synthesized dimer: aDGlcp(1-4)bDGalp Status: predicted in silico
Confirmation methods: in silico ID: 2727 | Organism (ID 4054): Escherichia coli O117 Full structure (ID 2704): CSDB ID(s): 1857, 3145, 20704, 21517, 28683, 32135 Molecule role: O-antigen | |
| Enzyme name: WbeB UniProt ID: A6M9B6 CAZy family: GT2 Gene name: wbeB Gene cluster ID: DQ465247 | Synthesized dimer: aLRhap(1-4)aDGlcp Status: predicted in silico
Confirmation methods: in silico ID: 2728 | Organism (ID 4054): Escherichia coli O117 Full structure (ID 2704): CSDB ID(s): 1857, 3145, 20704, 21517, 28683, 32135 Molecule role: O-antigen | |
| Enzyme name: WbeA UniProt ID: A6M9B5 CAZy family: GT2 Gene name: wbeA Gene cluster ID: DQ465247 | Synthesized dimer: bDGalpN(1-3)aLRhap Status: predicted in silico
Confirmation methods: in silico ID: 2729 | Organism (ID 4054): Escherichia coli O117 Full structure (ID 2704): CSDB ID(s): 1857, 3145, 20704, 21517, 28683, 32135 Molecule role: O-antigen | |
| Enzyme name: Orf9 Group: WbbD UniProt ID: A0A0A8J6K8 Gene name: amsE Gene cluster ID: AB812055 | Synthesized dimer: bDGalp(1-3)bDGalpN Status: predicted in silico
Confirmation methods: in silico ID: 2730 | Organism (ID 8198): Escherichia coli O131 Full structure (ID 12459): CSDB ID(s): 1873 Molecule role: O-antigen | Iguchi et al. 2015 DOI: 10.1093/dnares/dsu043 |
| Enzyme name: Orf8 UniProt ID: A0A0A6ZEN7 Gene name: wepN Gene cluster ID: AB812055 | Synthesized dimer: bDGalp(1-6)bDGalp Status: predicted in silico
Confirmation methods: in silico ID: 2731 | Organism (ID 8198): Escherichia coli O131 Full structure (ID 12459): CSDB ID(s): 1873 Molecule role: O-antigen | |
| Enzyme name: Orf6 UniProt ID: A0A0A6ZES2 Gene name: lst Gene cluster ID: AB812055 | Synthesized dimer: aNeup(2-6)bDGalp Status: predicted in silico
Confirmation methods: in silico ID: 2732 | Organism (ID 8198): Escherichia coli O131 Full structure (ID 12459): CSDB ID(s): 1873 Molecule role: O-antigen | |
| Enzyme name: WbvW Group: WbbD UniProt ID: A6M9E0 CAZy family: GT2 Gene name: wbvW Gene cluster ID: DQ465249 | Synthesized dimer: bDGalp(1-3)bDGalpN Status: predicted in silico
Confirmation methods: in silico ID: 2733 | Organism (ID 8203): Escherichia coli O146 Full structure (ID 36561): Molecule role: O-antigen | Knirel et al. 2017 DOI: 10.1007/s10719-016-9730-y |
| Enzyme name: WbwV UniProt ID: A6M9D9 CAZy family: GT2 Gene name: wbwV Gene cluster ID: DQ465249 | Synthesized dimer: aLRhap(1-4)bDGalp Status: predicted in silico
Confirmation methods: in silico ID: 2734 | Organism (ID 8203): Escherichia coli O146 Full structure (ID 36561): Molecule role: O-antigen | |
| Synthesized dimer: aLRhap(1-2)aLRhap Status: predicted in silico
Confirmation methods: in silico ID: 2735 | Organism (ID 8203): Escherichia coli O146 Full structure (ID 36561): Molecule role: O-antigen | ||
| Enzyme name: WbvU UniProt ID: A6M9D7 CAZy family: GT4 Gene name: wbwU Gene cluster ID: DQ465249 | Synthesized dimer: aDGlcp(1-3)aLRhap Status: predicted in silico
Confirmation methods: in silico ID: 2736 | Organism (ID 8203): Escherichia coli O146 Full structure (ID 36561): Molecule role: O-antigen | |
| Enzyme name: WclG Group: WbbD UniProt ID: Q4KYP7 CAZy family: GT2 Gene name: wclG Gene cluster ID: AY657020 | Synthesized dimer: bDGalp(1-3)bDGalpN Status: predicted in silico
Confirmation methods: in silico ID: 2737 | Organism (ID 8206): Escherichia coli O155 Full structure (ID 11566): CSDB ID(s): 1896 Molecule role: O-antigen | Guo et al. 2005 DOI: 10.1016/j.femsle.2005.05.036 |
| Enzyme name: WclF UniProt ID: Q4KYP8 CAZy family: GT4 Gene name: wclF Gene cluster ID: AY657020 | Synthesized dimer: aDGalp(1-3)bDGalp Status: predicted in silico
Confirmation methods: in silico ID: 2738 | Organism (ID 8206): Escherichia coli O155 Full structure (ID 11566): CSDB ID(s): 1896 Molecule role: O-antigen | |
| Enzyme name: WclE UniProt ID: Q4KYQ0 CAZy family: GT2 Gene name: wclE Gene cluster ID: AY657020 | Synthesized dimer: bDGalpA(1-4)aDGalp Status: predicted in silico
Confirmation methods: in silico ID: 2739 | Organism (ID 8206): Escherichia coli O155 Full structure (ID 11566): CSDB ID(s): 1896 Molecule role: O-antigen | |
| Enzyme name: Orf6 Group: WbbD UniProt ID: A0A0B1E9C9 Gene name: wbbD Gene cluster ID: AB812066 | Synthesized dimer: bDGalp(1-3)bDGalpN Status: predicted in silico
Confirmation methods: in silico ID: 2740 | Organism (ID 6949): Escherichia coli O160 Full structure (ID 11985): CSDB ID(s): 1901 Molecule role: O-antigen | Perepelov et al. 2015b DOI: 10.1016/j.carres.2015.09.007 |
| Enzyme name: Orf5 UniProt ID: A0A0B1E7T8 Gene name: sacB Gene cluster ID: AB812066 | Synthesized dimer: P(?-6)bDGalp Status: predicted in silico
Confirmation methods: in silico ID: 2741 | Organism (ID 6949): Escherichia coli O160 Full structure (ID 11985): CSDB ID(s): 1901 Molecule role: O-antigen | |
| Enzyme name: Orf11 Group: WbbD UniProt ID: A0A075TK83 Gene name: amsE Gene cluster ID: AB812071 | Synthesized dimer: bDGalp(1-3)bDGalpN Status: predicted in silico
Confirmation methods: in silico ID: 2742 | Organism (ID 4910): Escherichia coli O171 Full structure (ID 6914): CSDB ID(s): 1913 Molecule role: O-antigen | Iguchi et al. 2015 DOI: 10.1093/dnares/dsu043 |
| Enzyme name: Orf7 UniProt ID: A0A0A8J948 Gene cluster ID: AB812071 | Synthesized dimer: aNeup(2-6)bDGalp Status: predicted in silico
Confirmation methods: in silico ID: 2743 | Organism (ID 4910): Escherichia coli O171 Full structure (ID 6914): CSDB ID(s): 1913 Molecule role: O-antigen | |
| Enzyme name: WbcZ Group: WbbD UniProt ID: Q3IA90 CAZy family: GT2 Gene name: wbcZ Gene cluster ID: AB812072 | Synthesized dimer: bDGalp(1-3)bDGalpN Status: predicted in silico
Confirmation methods: in silico ID: 2744 | Organism (ID 6636): Escherichia coli O174 Full structure (ID 10338): CSDB ID(s): 1916, 8458, 27150, 30040 Molecule role: O-antigen | Fontana et al. 2012 DOI: 10.1016/j.carres.2012.02.020 |
| Enzyme name: WbcY UniProt ID: Q3IA91 CAZy family: GT2 Gene name: wbcY Gene cluster ID: AB812072 | Synthesized dimer: bDGlcpA(1-3)bDGalp Status: predicted in silico
Confirmation methods: in silico ID: 2745 | Organism (ID 6636): Escherichia coli O174 Full structure (ID 10338): CSDB ID(s): 1916, 8458, 27150, 30040 Molecule role: O-antigen | |
| Enzyme name: WbcX UniProt ID: Q3IA94 Gene name: wbcX Gene cluster ID: AB812072 | Synthesized dimer: bDGlcpN(1-2)bDGlcpA Status: predicted in silico
Confirmation methods: in silico ID: 2746 | Organism (ID 6636): Escherichia coli O174 Full structure (ID 10338): CSDB ID(s): 1916, 8458, 27150, 30040 Molecule role: O-antigen | |
| Enzyme name: Orf8 Group: WbbD UniProt ID: A0A0A8J672 Gene name: amsE Gene cluster ID: AB812075 | Synthesized dimer: bDGalp(1-3)bDGalpN Status: predicted in silico
Confirmation methods: in silico ID: 2747 | Organism (ID 2381): Escherichia coli O178 Full structure (ID 4050): CSDB ID(s): 1920, 12836 Molecule role: O-antigen | Iguchi et al. 2015 DOI: 10.1093/dnares/dsu043 |
| Enzyme name: Orf1 Group: WbbD UniProt ID: A0A0A8J9N7 Gene cluster ID: AB812081 | Synthesized dimer: bDGalp(1-3)aDGalpN Status: predicted in silico
Confirmation methods: in silico ID: 2748 | Organism (ID 7180): Escherichia coli O185 Full structure (ID 12397): CSDB ID(s): 1929 Molecule role: O-antigen | |
| Enzyme name: Orf5 UniProt ID: A0A0A8J6M9 Gene cluster ID: AB812081 | Synthesized dimer: bDGlcpA(1-3)bDRibf Status: predicted in silico
Confirmation methods: in silico ID: 2749 | Organism (ID 7180): Escherichia coli O185 Full structure (ID 12397): CSDB ID(s): 1929 Molecule role: O-antigen | |
| Enzyme name: Orf7 UniProt ID: A0A0A8J766 Gene cluster ID: AB812081 | Synthesized dimer: bDGalpN(1-4)bDGlcpA Status: predicted in silico
Confirmation methods: in silico ID: 2750 | Organism (ID 7180): Escherichia coli O185 Full structure (ID 12397): CSDB ID(s): 1929 Molecule role: O-antigen | |
| Enzyme name: WfeD Group: WfeD UniProt ID: B5L3X8 CAZy family: GT26 Gene name: wfeD Gene cluster ID: EU296410 | Synthesized dimer: bDGalp(1-4)bDGlcpN Status: predicted in silico
Confirmation methods: in silico ID: 2751 | Organism (ID 8178): Escherichia coli O32 Full structure (ID 4699): CSDB ID(s): 1540, 3977, 11555, 23056, 26302, 26391, 108640, 110612 Molecule role: O-antigen | Liu et al. 2008 DOI: 10.1111/j.1574-6976.2008.00114.x |
| Enzyme name: WfeB UniProt ID: B5L3X6 CAZy family: GT2 Gene name: wfeB Gene cluster ID: EU296410 | Synthesized dimer: bDGalp(1-4)bDGalp Status: predicted in silico
Confirmation methods: in silico ID: 2752 | Organism (ID 8178): Escherichia coli O32 Full structure (ID 4699): CSDB ID(s): 1540, 3977, 11555, 23056, 26302, 26391, 108640, 110612 Molecule role: O-antigen | |
| Enzyme name: WfeA UniProt ID: B5L3X5 CAZy family: GT2 Gene name: wfeA Gene cluster ID: EU296410 | Synthesized dimer: bDGlcpA(1-6)bDGalp Status: predicted in silico
Confirmation methods: in silico ID: 2753 | Organism (ID 8178): Escherichia coli O32 Full structure (ID 4699): CSDB ID(s): 1540, 3977, 11555, 23056, 26302, 26391, 108640, 110612 Molecule role: O-antigen | |
| Enzyme name: WfeE UniProt ID: B5L3X9 CAZy family: GT4 Gene name: wfeE Gene cluster ID: EU296410 | Synthesized dimer: aDGalp(1-4)bDGlcpA Status: predicted in silico
Confirmation methods: in silico ID: 2754 | Organism (ID 8178): Escherichia coli O32 Full structure (ID 4699): CSDB ID(s): 1540, 3977, 11555, 23056, 26302, 26391, 108640, 110612 Molecule role: O-antigen | |
| Enzyme name: Orf6 Group: WfeD UniProt ID: A0A0A8J4T6 Gene cluster ID: AB812035 | Synthesized dimer: bDGalp(1-4)bDGlcpN Status: predicted in silico
Confirmation methods: in silico ID: 2755 | Organism (ID 4051): Escherichia coli O83 Full structure (ID 7001): CSDB ID(s): 1589, 20700, 22693, 26494 Molecule role: O-antigen | Iguchi et al. 2015 DOI: 10.1093/dnares/dsu043 |
| Enzyme name: Orf4 UniProt ID: A0A0A8J4E6 Gene cluster ID: AB812035 | Synthesized dimer: bDGalp(1-4)bDGalp Status: predicted in silico
Confirmation methods: in silico ID: 2756 | Organism (ID 4051): Escherichia coli O83 Full structure (ID 7001): CSDB ID(s): 1589, 20700, 22693, 26494 Molecule role: O-antigen | |
| Enzyme name: Orf3 UniProt ID: A0A0A8J5K0 Gene cluster ID: AB812035 | Synthesized dimer: bDGlcpA(1-6)bDGalp Status: predicted in silico
Confirmation methods: in silico ID: 2757 | Organism (ID 4051): Escherichia coli O83 Full structure (ID 7001): CSDB ID(s): 1589, 20700, 22693, 26494 Molecule role: O-antigen | |
| Enzyme name: Orf7 UniProt ID: E2QNQ5 Gene cluster ID: AB812035 | Synthesized dimer: aDGlcp(1-4)bDGlcpA Status: predicted in silico
Confirmation methods: in silico ID: 2758 | Organism (ID 4051): Escherichia coli O83 Full structure (ID 7001): CSDB ID(s): 1589, 20700, 22693, 26494 Molecule role: O-antigen | |
| Enzyme name: Orf9 Group: WfeD UniProt ID: A0A0B0W0E6 Gene cluster ID: AB812059 | Synthesized dimer: bDGalp(1-4)bDGlcpN Status: predicted in silico
Confirmation methods: in silico ID: 2759 | Organism (ID 1872): Escherichia coli O136 Full structure (ID 3376): CSDB ID(s): 1878, 20682, 31926, 32080 Molecule role: O-antigen | |
| Enzyme name: Orf7 UniProt ID: A0A0A8J626 Gene cluster ID: AB812059 | Synthesized dimer: bPsep(2-4)bDGalp Status: predicted in silico
Confirmation methods: in silico ID: 2760 | Organism (ID 1872): Escherichia coli O136 Full structure (ID 3376): CSDB ID(s): 1878, 20682, 31926, 32080 Molecule role: O-antigen | |
| Enzyme name: WbsA Group: WbsA UniProt ID: A0A0A8J465 Gene cluster ID: AB811610 | Synthesized dimer: bDGlcpA(1-3)aDGlcpN Status: predicted in silico
Confirmation methods: in silico ID: 2761 | Organism (ID 6765): Escherichia coli O30 Full structure (ID 11744): CSDB ID(s): 1539, 3840 Molecule role: O-antigen | Perepelov et al. 2014a DOI: 10.1016/j.carres.2014.02.001 |
| Enzyme name: WbdX Group: WbsA UniProt ID: B5L374 CAZy family: GT2 Gene name: wbdX Gene cluster ID: EU294162 | Synthesized dimer: bDGlcpA(1-3)aDGlcpN Status: predicted in silico
Confirmation methods: in silico ID: 2762 | Organism (ID 8189): Escherichia coli O79 Full structure (ID 7899): CSDB ID(s): 1585, 3102, 9267, 23046, 27611, 28530, 29699 Molecule role: O-antigen | Liu et al. 2008 DOI: 10.1111/j.1574-6976.2008.00114.x |
| Enzyme name: WbsA Group: WbsA UniProt ID: Q8GMK1 CAZy family: GT2 Gene name: wbsA Gene cluster ID: AY035396 | Synthesized dimer: bDGlcpA(1-3)bDGlcpN Status: predicted in silico
Confirmation methods: in silico ID: 2763 | Organism (ID 1003): Escherichia coli O91 Full structure (ID 1631): CSDB ID(s): 895, 1597, 9226, 11872, 20701, 29351, 30235 Molecule role: O-antigen | Kjellberg et al. 1999 DOI: 10.1021/bi9910629 |
| Enzyme name: WbsF UniProt ID: Q8GMJ5 CAZy family: GT2 Gene name: wbsF Gene cluster ID: AY035396 | Synthesized dimer: bDGlcpN(1-4)bDGlcpA Status: predicted in silico
Confirmation methods: in silico ID: 2764 | Organism (ID 1003): Escherichia coli O91 Full structure (ID 1631): CSDB ID(s): 895, 1597, 9226, 11872, 20701, 29351, 30235 Molecule role: O-antigen | |
| Enzyme name: WbsG UniProt ID: Q8GMJ4 Gene name: wbsG Gene cluster ID: AY035396 | Synthesized dimer: bDGalp(1-4)bDGlcpN Status: predicted in silico
Confirmation methods: in silico ID: 2765 | Organism (ID 1003): Escherichia coli O91 Full structure (ID 1631): CSDB ID(s): 895, 1597, 9226, 11872, 20701, 29351, 30235 Molecule role: O-antigen | |
| Enzyme name: WbsE UniProt ID: 8GMJ6 Gene name: wbsE Gene cluster ID: AY035396 | Synthesized dimer: aDQuip3N(1-4)bDGalp Status: predicted in silico
Confirmation methods: in silico ID: 2766 | Organism (ID 1003): Escherichia coli O91 Full structure (ID 1631): CSDB ID(s): 895, 1597, 9226, 11872, 20701, 29351, 30235 Molecule role: O-antigen | |
| Enzyme name: WfdV Group: WbsA UniProt ID: B5L396 CAZy family: GT2 Gene name: wfdV Gene cluster ID: EU294164 | Synthesized dimer: bDGlcpA(1-3)bDGlcpN Status: predicted in silico
Confirmation methods: in silico ID: 2767 | Organism (ID 1507): Escherichia coli O143 Full structure (ID 2676): CSDB ID(s): 1885, 3985, 20686, 22458, 23049, 30161, 108661, 110416 Molecule role: O-antigen | Liu et al. 2008 DOI: 10.1111/j.1574-6976.2008.00114.x |
| Enzyme name: WfdU UniProt ID: B5L393 Gene name: wfdU Gene cluster ID: EU294164 | Synthesized dimer: aDGalpN(1-4)bDGlcpA Status: predicted in silico
Confirmation methods: in silico ID: 2768 | Organism (ID 1507): Escherichia coli O143 Full structure (ID 2676): CSDB ID(s): 1885, 3985, 20686, 22458, 23049, 30161, 108661, 110416 Molecule role: O-antigen | |
| Enzyme name: WfdT UniProt ID: B5L392 CAZy family: GT2 Gene name: wfdT Gene cluster ID: EU294164 | Synthesized dimer: bDGalpA(1-3)aDGalpN Status: predicted in silico
Confirmation methods: in silico ID: 2769 | Organism (ID 1507): Escherichia coli O143 Full structure (ID 2676): CSDB ID(s): 1885, 3985, 20686, 22458, 23049, 30161, 108661, 110416 Molecule role: O-antigen | |
| Enzyme name: WeiG Group: WbsA UniProt ID: D8WNA7 CAZy family: GT2 Gene name: weiG Gene cluster ID: GU220361 | Synthesized dimer: bDGlcpA(1-3)bDGlcpN Status: predicted in silico
Confirmation methods: in silico ID: 2770 | Organism (ID 4897): Escherichia coli O161 Full structure (ID 9053): CSDB ID(s): 1902, 3829, 21179, 26826 Molecule role: O-antigen | Li et al. 2010a DOI: 10.1016/j.carres.2010.04.008 |
| Enzyme name: WeiF UniProt ID: D8WNA5 Gene name: weiF Gene cluster ID: GU220361 | Synthesized dimer: aLegp(2-4)bDGlcpA Status: predicted in silico
Confirmation methods: in silico ID: 2771 | Organism (ID 4897): Escherichia coli O161 Full structure (ID 9053): CSDB ID(s): 1902, 3829, 21179, 26826 Molecule role: O-antigen | |
| Enzyme name: Orf7 Group: WccE UniProt ID: A0A0A8J4F3 Gene cluster ID: AB811615 | Synthesized dimer: bDGlcpA(1-3)bDGalpN Status: predicted in silico
Confirmation methods: in silico ID: 2772 | Organism (ID 8180): Escherichia coli O38 Full structure (ID 7916): CSDB ID(s): 1545, 23073, 23220 Molecule role: O-antigen | Iguchi et al. 2015 DOI: 10.1093/dnares/dsu043 |
| Enzyme name: WccE Group: WccE UniProt ID: A0A0A6ZEU6 Gene cluster ID: AB812060 | Synthesized dimer: bDGlcpA(1-3)bDGalpN Status: predicted in silico
Confirmation methods: in silico ID: 2773 | Organism (ID 6946): Escherichia coli O140 Full structure (ID 11976): CSDB ID(s): 1882, 3906 Molecule role: O-antigen | Perepelov et al. 2015c DOI: 10.1016/j.carres.2015.04.004 |
| Enzyme name: WccD UniProt ID: A0A0A8J6S4 Gene cluster ID: AB812060 | Synthesized dimer: aDGlcp(1-4)bDGlcpA Status: predicted in silico
Confirmation methods: in silico ID: 2774 | Organism (ID 6946): Escherichia coli O140 Full structure (ID 11976): CSDB ID(s): 1882, 3906 Molecule role: O-antigen | |
| Enzyme name: WfeI Group: WfeI UniProt ID: B5L407 CAZy family: GT2 Gene name: wfeI Gene cluster ID: EU296413 | Synthesized dimer: aLIdopA(1-3)bDGalpN Status: predicted in silico
Confirmation methods: in silico ID: 2775 | Organism (ID 4473): Escherichia coli O112ab Full structure (ID 7904): CSDB ID(s): 705, 1851, 3390, 3646, 23057, 26942 Molecule role: O-antigen | Liu et al. 2008 DOI: 10.1111/j.1574-6976.2008.00114.x |
| Enzyme name: WfeH UniProt ID: B5L406 Gene name: wfeH Gene cluster ID: EU296413 | Synthesized dimer: aDGlcp(1-4)aLIdopA Status: predicted in silico
Confirmation methods: in silico ID: 2776 | Organism (ID 4473): Escherichia coli O112ab Full structure (ID 7904): CSDB ID(s): 705, 1851, 3390, 3646, 23057, 26942 Molecule role: O-antigen | |
| Enzyme name: WfeG UniProt ID: B5L404 CAZy family: GT4 Gene name: wfeG Gene cluster ID: EU296413 | Synthesized dimer: aDGalpN(1-4)aDGlcp Status: predicted in silico
Confirmation methods: in silico ID: 2777 | Organism (ID 4473): Escherichia coli O112ab Full structure (ID 7904): CSDB ID(s): 705, 1851, 3390, 3646, 23057, 26942 Molecule role: O-antigen | |
| Enzyme name: WfeF UniProt ID: B5L403 CAZy family: GT2 Gene name: wfeF Gene cluster ID: EU296413 | Synthesized dimer: bDGlcpN(1-3)aDGalpN Status: predicted in silico
Confirmation methods: in silico ID: 2778 | Organism (ID 4473): Escherichia coli O112ab Full structure (ID 7904): CSDB ID(s): 705, 1851, 3390, 3646, 23057, 26942 Molecule role: O-antigen | |
| Enzyme name: WcnN UniProt ID: E2DNN5 Gene name: wcnN Gene cluster ID: AB972423 | Synthesized dimer: bDGlcpA(1-4)bDGlcpN Status: predicted in silico
Confirmation methods: in silico ID: 2779 | Organism (ID 8202): Escherichia coli O137 Full structure (ID 12256): CSDB ID(s): 1879 Molecule role: O-antigen | Iguchi et al. 2015 DOI: 10.1093/dnares/dsu043 |
| Enzyme name: WcnM UniProt ID: E2DNN4 CAZy family: GT4 Gene name: wcnM Gene cluster ID: AB972423 | Synthesized dimer: aDGlcpN(1-4)bDGlcpA Status: predicted in silico
Confirmation methods: in silico ID: 2780 | Organism (ID 8202): Escherichia coli O137 Full structure (ID 12256): CSDB ID(s): 1879 Molecule role: O-antigen | |
| Enzyme name: WcnL UniProt ID: E2DNN3 CAZy family: GT25 Gene name: wcnL Gene cluster ID: AB972423 | Synthesized dimer: bDGlcp(1-4)aDGlcpN Status: predicted in silico
Confirmation methods: in silico ID: 2781 | Organism (ID 8202): Escherichia coli O137 Full structure (ID 12256): CSDB ID(s): 1879 Molecule role: O-antigen | |
| Enzyme name: Orf10 Group: WcmT UniProt ID: A0A0A8J5R9 Gene cluster ID: AB812051 | Synthesized dimer: aDGalpA(1-3)bDGlcpN Status: predicted in silico
Confirmation methods: in silico ID: 2782 | Organism (ID 4053): Escherichia coli O116 Full structure (ID 2702): CSDB ID(s): 1856, 20703 Molecule role: O-antigen | |
| Enzyme name: Orf6 UniProt ID: A0A0A8J6B8 Gene cluster ID: AB812051 | Synthesized dimer: bDQuip4N(1-6)aDGlcpN Status: predicted in silico
Confirmation methods: in silico ID: 2783 | Organism (ID 4053): Escherichia coli O116 Full structure (ID 2702): CSDB ID(s): 1856, 20703 Molecule role: O-antigen | |
| Enzyme name: Orf7 Group: WcmT UniProt ID: A0A0A8J5H3 Gene name: pglA Gene cluster ID: AB812057 | Synthesized dimer: aDGalpA(1-3)aDGlcpN Status: predicted in silico
Confirmation methods: in silico ID: 2784 | Organism (ID 8200): Escherichia coli O133 Full structure (ID 12255): CSDB ID(s): 1875 Molecule role: O-antigen | |
| Enzyme name: Orf6 UniProt ID: A0A0A8J6N4 Gene cluster ID: AB812057 | Synthesized dimer: aLRhap(1-4)aDGalpA Status: predicted in silico
Confirmation methods: in silico ID: 2785 | Organism (ID 8200): Escherichia coli O133 Full structure (ID 12255): CSDB ID(s): 1875 Molecule role: O-antigen | |
| Synthesized dimer: aLRhap(1-2)aLRhap Status: predicted in silico
Confirmation methods: in silico ID: 2786 | Organism (ID 8200): Escherichia coli O133 Full structure (ID 12255): CSDB ID(s): 1875 Molecule role: O-antigen | ||
| Synthesized dimer: aLRhap(1-2)aLRhap Status: predicted in silico
Confirmation methods: in silico ID: 2787 | Organism (ID 8200): Escherichia coli O133 Full structure (ID 12255): CSDB ID(s): 1875 Molecule role: O-antigen | ||
| Enzyme name: Orf5 UniProt ID: A0A0A8J7Y3 Gene cluster ID: AB812085 | Synthesized dimer: bDGalp(1-3)bDGlcpN Status: predicted in silico
Confirmation methods: in silico ID: 2788 | Organism (ID 7617): Escherichia coli O54 Full structure (ID 12862): CSDB ID(s): 1561, 12462 Molecule role: O-antigen | Naumenko et al. 2018 DOI: 10.1016/j.carres.2018.04.001 |
| Enzyme name: Orf6 UniProt ID: A0A0A8J7V6 Gene cluster ID: AB812085 | Synthesized dimer: aDGalpA(1-2)aLRhap Status: predicted in silico
Confirmation methods: in silico ID: 2789 | Organism (ID 7617): Escherichia coli O54 Full structure (ID 12862): CSDB ID(s): 1561, 12462 Molecule role: O-antigen | |
| Enzyme name: Orf9 UniProt ID: A0A0A8J7B5 Gene cluster ID: AB812085 | Synthesized dimer: aLRhap(1-2)bDRibf Status: predicted in silico
Confirmation methods: in silico ID: 2790 | Organism (ID 7617): Escherichia coli O54 Full structure (ID 12862): CSDB ID(s): 1561, 12462 Molecule role: O-antigen | |
| Enzyme name: WcmT Group: WcmT UniProt ID: E2DNP7 CAZy family: GT4 Gene name: wcmT Gene cluster ID: GU068044 | Synthesized dimer: aDGalpA(1-3)bDGlcpN Status: predicted in silico
Confirmation methods: in silico ID: 2791 | Organism (ID 1374): Escherichia coli O158 Full structure (ID 9750): CSDB ID(s): 1287, 1899, 3910, 20691 Molecule role: O-antigen | Perepelov et al. 2011d DOI: 10.1016/j.carres.2011.07.021 |
| Enzyme name: WcmQ UniProt ID: E2DNP4 Gene name: wcmQ Gene cluster ID: GU068044 | Synthesized dimer: bDManpN(1-4)aDGalpA Status: predicted in silico
Confirmation methods: in silico ID: 2792 | Organism (ID 1374): Escherichia coli O158 Full structure (ID 9750): CSDB ID(s): 1287, 1899, 3910, 20691 Molecule role: O-antigen | |
| Enzyme name: WcmR UniProt ID: E2DNP5 Gene name: wcmR Gene cluster ID: GU068044 | Synthesized dimer: aLRhap(1-3)bDManpN Status: predicted in silico
Confirmation methods: in silico ID: 2793 | Organism (ID 1374): Escherichia coli O158 Full structure (ID 9750): CSDB ID(s): 1287, 1899, 3910, 20691 Molecule role: O-antigen | |
| Enzyme name: WcmS UniProt ID: E2DNP6 CAZy family: GT4 Gene name: wcmS Gene cluster ID: GU068044 | Synthesized dimer: bDGlcp(1-6)bDManpN Status: predicted in silico
Confirmation methods: in silico ID: 2794 | Organism (ID 1374): Escherichia coli O158 Full structure (ID 9750): CSDB ID(s): 1287, 1899, 3910, 20691 Molecule role: O-antigen | |
| Enzyme name: WfgO Group: WfgO UniProt ID: B5L3N4 CAZy family: GT4 Gene name: wfgO Gene cluster ID: EU294177 | Synthesized dimer: aDGalpA(1-3)bDGalpN Status: predicted in silico
Confirmation methods: in silico ID: 2795 | Organism (ID 6990): Escherichia coli O87 Full structure (ID 12053): CSDB ID(s): 1594 Molecule role: O-antigen | Liu et al. 2008 DOI: 10.1111/j.1574-6976.2008.00114.x |
| Enzyme name: WfgN UniProt ID: B5L3N3 CAZy family: GT4 Gene name: wfgN Gene cluster ID: EU294177 | Synthesized dimer: aDGalp(1-3)aDGalpA Status: predicted in silico
Confirmation methods: in silico ID: 2796 | Organism (ID 6990): Escherichia coli O87 Full structure (ID 12053): CSDB ID(s): 1594 Molecule role: O-antigen | |
| Enzyme name: WfgL UniProt ID: B5L3N0 Gene name: wfgL Gene cluster ID: EU294177 | Synthesized dimer: bDGalf(1-4)aDGalp Status: predicted in silico
Confirmation methods: in silico ID: 2797 | Organism (ID 6990): Escherichia coli O87 Full structure (ID 12053): CSDB ID(s): 1594 Molecule role: O-antigen | |
| Enzyme name: Orf12 Group: WfbZ UniProt ID: A0A0A8J423 Gene cluster ID: AB812026 | Synthesized dimer: bDGalpA(1-3)bDGlcpN Status: predicted in silico
Confirmation methods: in silico ID: 2798 Notes: Anomeric configuration of GlcpN is inverted by polymerase and becomes a-GlcN in the O-antigen. | Organism (ID 2477): Escherichia coli O65 Full structure (ID 36562): CSDB ID(s): 4043 Molecule role: O-antigen | Iguchi et al. 2015 DOI: 10.1093/dnares/dsu043 |
| Enzyme name: Orf11 UniProt ID: A0A0A8J570 Gene name: pglJ_1 Gene cluster ID: AB812026 | Synthesized dimer: aDGalpN(1-4)bDGalpA Status: predicted in silico
Confirmation methods: in silico ID: 2799 | Organism (ID 2477): Escherichia coli O65 Full structure (ID 3046): CSDB ID(s): 1572, 9118, 10339, 20698 Molecule role: O-antigen | |
| Enzyme name: Orf9 UniProt ID: A0A0A8J4H8 Gene cluster ID: AB812026 | Synthesized dimer: aDGalpA(1-4)aDGalpN Status: predicted in silico
Confirmation methods: in silico ID: 2800 | Organism (ID 2477): Escherichia coli O65 Full structure (ID 3046): CSDB ID(s): 1572, 9118, 10339, 20698 Molecule role: O-antigen | |
| Enzyme name: Orf7 UniProt ID: A0A0A8J419 Gene cluster ID: AB812026 | Synthesized dimer: bDQuip3N(1-4)aDGalpA Status: predicted in silico
Confirmation methods: in silico ID: 2801 | Organism (ID 2477): Escherichia coli O65 Full structure (ID 3046): CSDB ID(s): 1572, 9118, 10339, 20698 Molecule role: O-antigen | |
| Enzyme name: Orf8 Group: WfbZ UniProt ID: A0A0A8J4N2 Gene cluster ID: AB812030 | Synthesized dimer: bDGalpA(1-3)bDGlcpN Status: predicted in silico
Confirmation methods: in silico ID: 2802 | Organism (ID 4648): Escherichia coli O74 Full structure (ID 8485): CSDB ID(s): 1580, 117379 Molecule role: O-antigen | |
| Enzyme name: Orf10 UniProt ID: A0A0A8J5D0 Gene cluster ID: AB812030 | Synthesized dimer: aDGlcpN(1-4)bDGalpA Status: predicted in silico
Confirmation methods: in silico ID: 2803 | Organism (ID 4648): Escherichia coli O74 Full structure (ID 8485): CSDB ID(s): 1580, 117379 Molecule role: O-antigen | |
| Enzyme name: Orf7 UniProt ID: A0A0A8J785 Gene name: pglI Gene cluster ID: AB812030 | Synthesized dimer: bDFucp3N(1-3)aDGlcpN Status: predicted in silico
Confirmation methods: in silico ID: 2804 | Organism (ID 4648): Escherichia coli O74 Full structure (ID 8485): CSDB ID(s): 1580, 117379 Molecule role: O-antigen | |
| Enzyme name: Orf9 Group: WfbZ UniProt ID: A0A076G9T7 Gene cluster ID: KJ776793 | Synthesized dimer: bDGalpA(1-3)bDGlcpN Status: predicted in silico
Confirmation methods: in silico ID: 2805 | Organism (ID 17068): Escherichia coli L19 Full structure (ID 11871): CSDB ID(s): 30565, 30919 Molecule role: O-antigen | Zdorovenko et al. 2014 DOI: 10.1099/mic.0.080804-0 |
| Enzyme name: Orf5 UniProt ID: A0A076G3T0 Gene cluster ID: KJ776793 | Synthesized dimer: bDGlcp(1-4)bDGalpA Status: predicted in silico
Confirmation methods: in silico ID: 2806 | Organism (ID 17068): Escherichia coli L19 Full structure (ID 11871): CSDB ID(s): 30565, 30919 Molecule role: O-antigen | |
| Enzyme name: Orf7 UniProt ID: A0A076G516 Gene cluster ID: KJ776793 | Synthesized dimer: bDGlcpA(1-4)bDGlcp Status: predicted in silico
Confirmation methods: in silico ID: 2807 | Organism (ID 17068): Escherichia coli L19 Full structure (ID 11871): CSDB ID(s): 30565, 30919 Molecule role: O-antigen | |
| Enzyme name: WfbZ Group: WfbZ UniProt ID: A6MF13 CAZy family: GT2 Gene name: wfbZ Gene cluster ID: DQ868766 | Synthesized dimer: bDGalpA(1-3)bDGalpN Status: predicted in silico
Confirmation methods: in silico ID: 2808 | Organism (ID 19): Escherichia coli O147 Full structure (ID 35): CSDB ID(s): 1471, 1888, 9178, 10568, 11609, 20687, 28478, 28869, 29937 Molecule role: O-antigen | Han et al. 2007 DOI: 10.1128/AEM.01820-06 |
| Enzyme name: WfbY UniProt ID: A6MF12 CAZy family: GT2 Gene name: wfbY Gene cluster ID: DQ868766 | Synthesized dimer: aLRhap(1-4)bDGalpA Status: predicted in silico
Confirmation methods: in silico ID: 2809 | Organism (ID 19): Escherichia coli O147 Full structure (ID 35): CSDB ID(s): 1471, 1888, 9178, 10568, 11609, 20687, 28478, 28869, 29937 Molecule role: O-antigen | |
| Synthesized dimer: aLRhap(1-2)aLRhap Status: predicted in silico
Confirmation methods: in silico ID: 2810 | Organism (ID 19): Escherichia coli O147 Full structure (ID 35): CSDB ID(s): 1471, 1888, 9178, 10568, 11609, 20687, 28478, 28869, 29937 Molecule role: O-antigen | ||
| Enzyme name: WbsU Group: WbsU UniProt ID: A6M9C4 CAZy family: GT4 Gene name: wbsU Gene cluster ID: DQ465248 | Synthesized dimer: aDGlcpN(1-3)bDGlcpN Status: predicted in silico
Confirmation methods: in silico ID: 2811 | Organism (ID 1063): Escherichia coli O126 Full structure (ID 1748): CSDB ID(s): 1865, 20679, 21878 Molecule role: O-antigen | Liu et al. 2007 DOI: 10.1016/j.mcp.2007.03.002 |
| Enzyme name: WbsT UniProt ID: A6M9C3 CAZy family: GT2 Gene name: wbsT Gene cluster ID: DQ465248 | Synthesized dimer: bDGalp(1-3)aDGlcpN Status: predicted in silico
Confirmation methods: in silico ID: 2812 | Organism (ID 1063): Escherichia coli O126 Full structure (ID 1748): CSDB ID(s): 1865, 20679, 21878 Molecule role: O-antigen | |
| Enzyme name: WbgK UniProt ID: A6M9C1 Gene name: wbgK Gene cluster ID: DQ465248 | Synthesized dimer: bDManp(1-3)bDGalp Status: predicted in silico
Confirmation methods: in silico ID: 2813 | Organism (ID 1063): Escherichia coli O126 Full structure (ID 1748): CSDB ID(s): 1865, 20679, 21878 Molecule role: O-antigen | |
| Enzyme name: WbgL UniProt ID: A6M9C2 CAZy family: GT11 Gene name: wbgL Gene cluster ID: DQ465248 | Synthesized dimer: aLFucp(1-2)bDGalp Status: predicted in silico
Confirmation methods: in silico ID: 2814 | Organism (ID 1063): Escherichia coli O126 Full structure (ID 1748): CSDB ID(s): 1865, 20679, 21878 Molecule role: O-antigen | |
| Enzyme name: Orf1 UniProt ID: A0A0A8J2Y6 Gene cluster ID: AB811608 | Synthesized dimer: bDGlcpN(1-3)aDGlcpN Status: predicted in silico
Confirmation methods: in silico ID: 2815 | Organism (ID 8101): Escherichia coli O28ab Full structure (ID 13816): CSDB ID(s): 736, 1403, 1536 Molecule role: O-antigen | Iguchi et al. 2015 DOI: 10.1093/dnares/dsu043 |
| Enzyme name: Orf6 UniProt ID: A0A0A8J2Z2 Gene name: tagF AM266_09020 Gene cluster ID: AB811608 | Synthesized dimer: P(?-4)bDGlcpN Status: predicted in silico
Confirmation methods: in silico ID: 2816 | Organism (ID 8101): Escherichia coli O28ab Full structure (ID 13816): CSDB ID(s): 736, 1403, 1536 Molecule role: O-antigen | |
| Enzyme name: Orf4 UniProt ID: A0A0A8J406 Gene cluster ID: AB811608 | Synthesized dimer: bDGlcp(1-3)DGro Status: predicted in silico
Confirmation methods: in silico ID: 2817 | Organism (ID 8101): Escherichia coli O28ab Full structure (ID 13816): CSDB ID(s): 736, 1403, 1536 Molecule role: O-antigen | |
| Enzyme name: WbtG Group: WbtG UniProt ID: Q6QNC0 CAZy family: GT4 Gene name: wbtG Gene cluster ID: AY532664 | Synthesized dimer: aDGalpN(1-3)bDGlcpN Status: predicted in silico
Confirmation methods: in silico ID: 2818 | Organism (ID 4899): Escherichia coli O103 Full structure (ID 9058): CSDB ID(s): 1842, 12798, 21155, 25457, 30382, 30868 Molecule role: O-antigen | Liu et al. 2010b DOI: 10.1093/glycob/cwq015 |
| Enzyme name: WftF UniProt ID: Q6QNC1 CAZy family: GT4 Gene name: wbtF Gene cluster ID: AY532664 | Synthesized dimer: aDGlcpN(1-4)aDGalpN Status: predicted in silico
Confirmation methods: in silico ID: 2819 | Organism (ID 4899): Escherichia coli O103 Full structure (ID 9058): CSDB ID(s): 1842, 12798, 21155, 25457, 30382, 30868 Molecule role: O-antigen | |
| Enzyme name: WftE UniProt ID: Q6QNC3 CAZy family: GT2 Gene name: wbtE Gene cluster ID: AY532664 | Synthesized dimer: bDFucp3N(1-6)aDGlcpN Status: predicted in silico
Confirmation methods: in silico ID: 2820 | Organism (ID 4899): Escherichia coli O103 Full structure (ID 9058): CSDB ID(s): 1842, 12798, 21155, 25457, 30382, 30868 Molecule role: O-antigen | |
| Enzyme name: WftD UniProt ID: Q6QNC4 CAZy family: GT2 Gene name: wbtD Gene cluster ID: AY532664 | Synthesized dimer: bDGlcp(1-2)bDFucp3N Status: predicted in silico
Confirmation methods: in silico ID: 2821 | Organism (ID 4899): Escherichia coli O103 Full structure (ID 9058): CSDB ID(s): 1842, 12798, 21155, 25457, 30382, 30868 Molecule role: O-antigen | |
| Enzyme name: Orf6 Group: WbwH UniProt ID: A0A0A8J799 Gene name: ACU90_05815 Gene cluster ID: AB812031 | Synthesized dimer: aDGalpN(1-3)bDGalpN Status: predicted in silico
Confirmation methods: in silico ID: 2822 | Organism (ID 6561): Escherichia coli O76 Full structure (ID 11385): CSDB ID(s): 1582 Molecule role: O-antigen | Perepelov et al. 2013b DOI: 10.1016/j.carres.2013.04.027 |
| Enzyme name: Orf1 UniProt ID: A0A0A8J794 Gene cluster ID: AB812031 | Synthesized dimer: bDGalpN(1-4)aDGalpN Status: predicted in silico
Confirmation methods: in silico ID: 2823 | Organism (ID 6561): Escherichia coli O76 Full structure (ID 11385): CSDB ID(s): 1582 Molecule role: O-antigen | |
| Enzyme name: Orf5 UniProt ID: A0A0A8J487 Gene cluster ID: AB812031 | Synthesized dimer: bDGlcpA(1-4)bDGalpN Status: predicted in silico
Confirmation methods: in silico ID: 2824 | Organism (ID 6561): Escherichia coli O76 Full structure (ID 11385): CSDB ID(s): 1582 Molecule role: O-antigen | |
| Enzyme name: WbiN Group: WbwH UniProt ID: A0A0A8J8F1 Gene name: AKG99_13150 Gene cluster ID: AB812039 | Synthesized dimer: aDGalpN(1-3)bDGalpN Status: predicted in silico
Confirmation methods: in silico ID: 2829 | Organism (ID 3854): Escherichia coli O90 Full structure (ID 6546): CSDB ID(s): 1596, 118176, 218176 Molecule role: O-antigen | Iguchi et al. 2015 DOI: 10.1093/dnares/dsu043 |
| Enzyme name: WbiP Group: WbwJ UniProt ID: Q5J7C7 CAZy family: GT2 Gene name: wbiP Gene cluster ID: AB812039 | Synthesized dimer: bDGalp(1-3)aDGalpN Status: predicted in silico
Confirmation methods: in silico ID: 2830 | Organism (ID 3854): Escherichia coli O90 Full structure (ID 6546): CSDB ID(s): 1596, 118176, 218176 Molecule role: O-antigen | |
| Enzyme name: WbiQ UniProt ID: Q5J7C6 CAZy family: GT11 Gene name: wbiQ Gene cluster ID: AB812039 | Synthesized dimer: aLFucp(1-2)bDGalp Status: predicted in silico
Confirmation methods: in silico ID: 2831 | Organism (ID 3854): Escherichia coli O90 Full structure (ID 6546): CSDB ID(s): 1596, 118176, 218176 Molecule role: O-antigen | |
| Enzyme name: WbiN Group: WbwH UniProt ID: A0A0A8J8F1 Gene name: AKG99_13150 Gene cluster ID: AB812039 | Synthesized dimer: aDGalpN(1-3)aDGalpN Status: predicted in silico
Confirmation methods: in silico ID: 2832 | Organism (ID 580): Escherichia coli O127 Full structure (ID 985): CSDB ID(s): 7241, 10220, 20680, 25395, 28397, 108675, 117352 Molecule role: O-antigen | Pettit et al. 2010 DOI: 10.1016/j.bbrc.2010.08.087 |
| Enzyme name: WbiP Group: WbwJ UniProt ID: Q5J7C7 CAZy family: GT2 Gene name: wbiP Gene cluster ID: AB812039 | Synthesized dimer: bDGalp(1-3)aDGalpN Status: predicted in silico
Confirmation methods: in silico ID: 2833 | Organism (ID 580): Escherichia coli O127 Full structure (ID 985): CSDB ID(s): 7241, 10220, 20680, 25395, 28397, 108675, 117352 Molecule role: O-antigen | |
| Enzyme name: WbiQ UniProt ID: Q5J7C6 CAZy family: GT11 Gene name: wbiQ Gene cluster ID: AB812039 | Synthesized dimer: aLFucp(1-2)bDGalp Status: predicted in silico
Confirmation methods: in silico ID: 2834 | Organism (ID 580): Escherichia coli O127 Full structure (ID 985): CSDB ID(s): 7241, 10220, 20680, 25395, 28397, 108675, 117352 Molecule role: O-antigen | |
| Enzyme name: Orf1 Group: WbwH UniProt ID: A0A0A6ZF38 Gene name: wbiN Gene cluster ID: AB812061 | Synthesized dimer: aDGalpN(1-3)aDGalpN Status: predicted in silico
Confirmation methods: in silico ID: 2835 | Organism (ID 1508): Escherichia coli O142 Full structure (ID 2678): CSDB ID(s): 1884, 3113, 20685, 30056 Molecule role: O-antigen | Iguchi et al. 2015 DOI: 10.1093/dnares/dsu043 |
| Enzyme name: Orf10 UniProt ID: A0A0A8J8Q0 Gene name: pglJ, wbtF, WQ74_04135 Gene cluster ID: AB812061 | Synthesized dimer: aDGalpN(1-4)aDGalpN Status: predicted in silico
Confirmation methods: in silico ID: 2836 | Organism (ID 1508): Escherichia coli O142 Full structure (ID 2678): CSDB ID(s): 1884, 3113, 20685, 30056 Molecule role: O-antigen | |
| Enzyme name: Orf8 UniProt ID: A0A0A8J6U2 Gene cluster ID: AB812061 | Synthesized dimer: aLRhap(1-6)aDGalpN Status: predicted in silico
Confirmation methods: in silico ID: 2837 | Organism (ID 1508): Escherichia coli O142 Full structure (ID 2678): CSDB ID(s): 1884, 3113, 20685, 30056 Molecule role: O-antigen | |
| Enzyme name: Orf9 UniProt ID: A0A0A6ZEP3 Gene name: wclU, WQ74_04130 Gene cluster ID: AB812061 | Synthesized dimer: bDGlcpN(1-3)aDGalpN Status: predicted in silico
Confirmation methods: in silico ID: 2838 | Organism (ID 1508): Escherichia coli O142 Full structure (ID 2678): CSDB ID(s): 1884, 3113, 20685, 30056 Molecule role: O-antigen | |
| Enzyme name: WeiD Group: WbwH UniProt ID: E2DZF0 CAZy family: GT4 Gene name: weiD Gene cluster ID: GU299794 | Synthesized dimer: aDGalpN(1-3)bDGalpN Status: predicted in silico
Confirmation methods: in silico ID: 2839 | Organism (ID 4353): Escherichia coli O166 Full structure (ID 7657): CSDB ID(s): 1908, 25750, 30394 Molecule role: O-antigen | Liu et al. 2010c DOI: 10.1099/mic.0.037325-0 |
| Enzyme name: WeiC UniProt ID: E2DZE9 CAZy family: GT4 Gene name: weiC Gene cluster ID: GU299794 | Synthesized dimer: aDGalp(1-4)aDGalpN Status: predicted in silico
Confirmation methods: in silico ID: 2840 | Organism (ID 4353): Escherichia coli O166 Full structure (ID 7657): CSDB ID(s): 1908, 25750, 30394 Molecule role: O-antigen | |
| Enzyme name: WeiB UniProt ID: E2DZE8 CAZy family: GT4 Gene name: weiB Gene cluster ID: GU299794 | Synthesized dimer: aDGalp(1-6)aDGalp Status: predicted in silico
Confirmation methods: in silico ID: 2841 | Organism (ID 4353): Escherichia coli O166 Full structure (ID 7657): CSDB ID(s): 1908, 25750, 30394 Molecule role: O-antigen | |
| Enzyme name: WeiA UniProt ID: E2DZE6 CAZy family: GT2 Gene name: weiA Gene cluster ID: GU299794 | Synthesized dimer: bDGlcp(1-3)aDGalpN Status: predicted in silico
Confirmation methods: in silico ID: 2842 | Organism (ID 4353): Escherichia coli O166 Full structure (ID 7657): CSDB ID(s): 1908, 25750, 30394 Molecule role: O-antigen | |
| Enzyme name: WbqI Group: WbqI UniProt ID: Q84DF8 CAZy family: GT4 Gene name: wbqI Gene cluster ID: AY208937 | Synthesized dimer: aDGalpNA(1-3)aDGlcpN Status: predicted in silico
Confirmation methods: in silico ID: 2843 | Organism (ID 1717): Escherichia coli O121 Full structure (ID 3018): CSDB ID(s): 1861, 2663, 3991, 12634, 20676, 23071, 25713, 28686, 30313, 108660, 115430 Molecule role: O-antigen | Fratamico et al. 2003 DOI: 10.1128/JCM.41.7.3379-3383.2003 |
| Enzyme name: WbqH UniProt ID: Q84DF9 CAZy family: GT4 Gene name: wbqH Gene cluster ID: AY208937 | Synthesized dimer: aDGalpNA(1-4)aDGalpNA Status: predicted in silico
Confirmation methods: in silico ID: 2844 | Organism (ID 1717): Escherichia coli O121 Full structure (ID 3018): CSDB ID(s): 1861, 2663, 3991, 12634, 20676, 23071, 25713, 28686, 30313, 108660, 115430 Molecule role: O-antigen | |
| Enzyme name: WbqE UniProt ID: Q84DG3 CAZy family: GT2 Gene name: wbqE Gene cluster ID: AY208937 | Synthesized dimer: bDQuip4N(1-4)aDGalpNA Status: predicted in silico
Confirmation methods: in silico ID: 2845 | Organism (ID 1717): Escherichia coli O121 Full structure (ID 3018): CSDB ID(s): 1861, 2663, 3991, 12634, 20676, 23071, 25713, 28686, 30313, 108660, 115430 Molecule role: O-antigen | |
| Enzyme name: WfaH Group: WbqI UniProt ID: Q2VJ32 CAZy family: GT4 Gene name: wfaH Gene cluster ID: DQ109551 | Synthesized dimer: aDGalpNA(1-3)bDGlcpN Status: predicted in silico
Confirmation methods: in silico ID: 2846 | Organism (ID 4048): Escherichia coli O138 Full structure (ID 2714): CSDB ID(s): 1880, 20683 Molecule role: O-antigen | Wang et al. 2005 DOI: 10.1016/j.vetmic.2005.10.006 |
| Enzyme name: WfaG UniProt ID: Q2VJ35 CAZy family: GT4 Gene name: wfaG Gene cluster ID: DQ109551 | Synthesized dimer: aLRhap(1-4)aDGalpNA Status: predicted in silico
Confirmation methods: in silico ID: 2847 | Organism (ID 4048): Escherichia coli O138 Full structure (ID 2714): CSDB ID(s): 1880, 20683 Molecule role: O-antigen | |
| Enzyme name: WfaF UniProt ID: Q2VJ36 CAZy family: GT2 Gene name: wfaF Gene cluster ID: DQ109551 | Synthesized dimer: aLRhap(1-3)aLRhap Status: predicted in silico
Confirmation methods: in silico ID: 2848 | Organism (ID 4048): Escherichia coli O138 Full structure (ID 2714): CSDB ID(s): 1880, 20683 Molecule role: O-antigen | |
| Enzyme name: WcnZ Group: WbbL UniProt ID: D6BV50 CAZy family: GT2 Gene name: wcnZ Gene cluster ID: FJ940774 | Synthesized dimer: aLRhap(1-3)bDGlcpN Status: predicted in silico
Confirmation methods: in silico ID: 2849 | Organism (ID 894): Escherichia coli O35 Full structure (ID 3174): CSDB ID(s): 1542, 3359, 20697, 27458, 30390 Molecule role: O-antigen | Liu et al. 2010a DOI: 10.1016/j.vetmic.2009.10.019 |
| Enzyme name: WcnY UniProt ID: D6BV48 CAZy family: GT2 Gene name: wcnY Gene cluster ID: FJ940774 | Synthesized dimer: aLRhap(1-2)aLRhap Status: predicted in silico
Confirmation methods: in silico ID: 2850 | Organism (ID 894): Escherichia coli O35 Full structure (ID 3174): CSDB ID(s): 1542, 3359, 20697, 27458, 30390 Molecule role: O-antigen | |
| Synthesized dimer: aLRhap(1-3)aLRhap Status: predicted in silico
Confirmation methods: in silico ID: 2851 | Organism (ID 894): Escherichia coli O35 Full structure (ID 3174): CSDB ID(s): 1542, 3359, 20697, 27458, 30390 Molecule role: O-antigen | ||
| Synthesized dimer: aLRhap(1-2)aLRhap Status: predicted in silico
Confirmation methods: in silico ID: 2852 | Organism (ID 894): Escherichia coli O35 Full structure (ID 3174): CSDB ID(s): 1542, 3359, 20697, 27458, 30390 Molecule role: O-antigen | ||
| Enzyme name: WcnX UniProt ID: D6BV47 CAZy family: GT2 Gene name: wcnX Gene cluster ID: FJ940774 | Synthesized dimer: aDGalpNA(1-2)aLRhap Status: predicted in silico
Confirmation methods: in silico ID: 2853 | Organism (ID 894): Escherichia coli O35 Full structure (ID 3174): CSDB ID(s): 1542, 3359, 20697, 27458, 30390 Molecule role: O-antigen | |
| Enzyme name: Orf12 Group: WbbL UniProt ID: A0A0A8J3R1 Gene cluster ID: AB811616 | Synthesized dimer: aLRhap(1-3)aDGlcpN Status: predicted in silico
Confirmation methods: in silico ID: 2854 | Organism (ID 6766): Escherichia coli O39 Full structure (ID 11745): CSDB ID(s): 1383, 1482, 1546, 3838 Molecule role: O-antigen | Perepelov et al. 2014b DOI: 10.1016/j.carres.2014.02.013 |
| Enzyme name: Orf11 UniProt ID: A0A0A8J6A1 Gene cluster ID: AB811616 | Synthesized dimer: aDManp(1-4)aLRhap Status: predicted in silico
Confirmation methods: in silico ID: 2855 | Organism (ID 6766): Escherichia coli O39 Full structure (ID 11745): CSDB ID(s): 1383, 1482, 1546, 3838 Molecule role: O-antigen | |
| Enzyme name: Orf9 UniProt ID: A0A0A8J4H0 Gene cluster ID: AB811616 | Synthesized dimer: bDQuip4N(1-2)aDManp Status: predicted in silico
Confirmation methods: in silico ID: 2856 | Organism (ID 6766): Escherichia coli O39 Full structure (ID 11745): CSDB ID(s): 1383, 1482, 1546, 3838 Molecule role: O-antigen | |
| Enzyme name: Orf8 UniProt ID: A0A0A8J4D7 Gene cluster ID: AB811616 | Synthesized dimer: aDGalp(1-3)aDManp Status: predicted in silico
Confirmation methods: in silico ID: 2857 | Organism (ID 6766): Escherichia coli O39 Full structure (ID 11745): CSDB ID(s): 1383, 1482, 1546, 3838 Molecule role: O-antigen | |
| Enzyme name: Orf7 Group: WbbL UniProt ID: A0A0A8J4P7 Gene name: wbbL Gene cluster ID: AB811622 | Synthesized dimer: aLRhap(1-3)bDGlcpN Status: predicted in silico
Confirmation methods: in silico ID: 2858 | Organism (ID 8182): Escherichia coli O48 Full structure (ID 7170): CSDB ID(s): 1555, 25512 Molecule role: O-antigen | Iguchi et al. 2015 DOI: 10.1093/dnares/dsu043 |
| Enzyme name: Orf6 Group: WekI UniProt ID: A0A0A8J434 Gene cluster ID: AB811622 | Synthesized dimer: aDGalp(1-4)aLRhap Status: predicted in silico
Confirmation methods: in silico ID: 2859 | Organism (ID 8182): Escherichia coli O48 Full structure (ID 7170): CSDB ID(s): 1555, 25512 Molecule role: O-antigen | |
| Enzyme name: Orf5 UniProt ID: A0A0A8J6M2 Gene name: epsE Gene cluster ID: AB811622 | Synthesized dimer: bDGalpN(1-3)aDGalp Status: predicted in silico
Confirmation methods: in silico ID: 2860 | Organism (ID 8182): Escherichia coli O48 Full structure (ID 7170): CSDB ID(s): 1555, 25512 Molecule role: O-antigen | |
| Enzyme name: Orf9 UniProt ID: A0A0A8J3L6 Gene cluster ID: AB811622 | Synthesized dimer: aDGalpA(1-3)bDGalpN Status: predicted in silico
Confirmation methods: in silico ID: 2861 | Organism (ID 8182): Escherichia coli O48 Full structure (ID 7170): CSDB ID(s): 1555, 25512 Molecule role: O-antigen | |
| Enzyme name: WekZ Group: WbbL UniProt ID: D7PDX6 CAZy family: GT2 Gene name: wekZ Gene cluster ID: GU299795 | Synthesized dimer: aLRhap(1-3)bDGlcpN Status: predicted in silico
Confirmation methods: in silico ID: 2862 | Organism (ID 2939): Escherichia coli O75 Full structure (ID 6993): CSDB ID(s): 619, 1581, 2600, 3365, 25625, 27304, 27421, 30337, 108703 Molecule role: O-antigen | Li et al. 2010b DOI: 10.1016/j.mimet.2010.04.008 |
| Enzyme name: WekY Group: WekI UniProt ID: D7PDX5 CAZy family: GT4 Gene name: wekY Gene cluster ID: GU299795 | Synthesized dimer: aDGalp(1-4)aLRhap Status: predicted in silico
Confirmation methods: in silico ID: 2863 | Organism (ID 2939): Escherichia coli O75 Full structure (ID 6993): CSDB ID(s): 619, 1581, 2600, 3365, 25625, 27304, 27421, 30337, 108703 Molecule role: O-antigen | |
| Enzyme name: WekX UniProt ID: D7PDX3 Gene name: wekX Gene cluster ID: GU299795 | Synthesized dimer: bDManp(1-4)aDGalp Status: predicted in silico
Confirmation methods: in silico ID: 2864 | Organism (ID 2939): Escherichia coli O75 Full structure (ID 6993): CSDB ID(s): 619, 1581, 2600, 3365, 25625, 27304, 27421, 30337, 108703 Molecule role: O-antigen | |
| Enzyme name: WekH Group: WbbL UniProt ID: D2X3D6 CAZy family: GT2 Gene name: wekH Gene cluster ID: GQ499368 | Synthesized dimer: aLRhap(1-3)aDGlcpN Status: predicted in silico
Confirmation methods: in silico ID: 2865 | Organism (ID 2921): Escherichia coli O119 Full structure (ID 4729): CSDB ID(s): 1859, 3392, 108674, 117023 Molecule role: O-antigen | Liu et al. 2010a DOI: 10.1016/j.vetmic.2009.10.019 |
| Enzyme name: WekI Group: WekI UniProt ID: D2X3D7 CAZy family: GT4 Gene name: wekI Gene cluster ID: GQ499368 | Synthesized dimer: aDGalp(1-4)aLRhap Status: predicted in silico
Confirmation methods: in silico ID: 2866 | Organism (ID 2921): Escherichia coli O119 Full structure (ID 4729): CSDB ID(s): 1859, 3392, 108674, 117023 Molecule role: O-antigen | |
| Enzyme name: WekK UniProt ID: D2X3E3 CAZy family: GT4 Gene name: wekK Gene cluster ID: GQ499368 | Synthesized dimer: bDManp(1-3)aDGalp Status: predicted in silico
Confirmation methods: in silico ID: 2867 | Organism (ID 2921): Escherichia coli O119 Full structure (ID 4729): CSDB ID(s): 1859, 3392, 108674, 117023 Molecule role: O-antigen | |
| Enzyme name: WekJ UniProt ID: D2X3E1 CAZy family: GT2 Gene name: wekJ Gene cluster ID: GQ499368 | Synthesized dimer: bLRhapN3N(1-3)bDManp Status: predicted in silico
Confirmation methods: in silico ID: 2868 | Organism (ID 2921): Escherichia coli O119 Full structure (ID 4729): CSDB ID(s): 1859, 3392, 108674, 117023 Molecule role: O-antigen | |
| Enzyme name: Orf7 Group: WbbL UniProt ID: A0A0A8J5Y6 Gene name: wbbL, SK85_02282 Gene cluster ID: AB812056 | Synthesized dimer: aLRhap(1-3)bDGlcpN Status: predicted in silico
Confirmation methods: in silico ID: 2869 | Organism (ID 8199): Escherichia coli O132 Full structure (ID 12279): CSDB ID(s): 11251, 11585 Molecule role: O-antigen | Shashkov et. al. 2016 DOI: 10.1016/j.carres.2016.03.016 |
| Enzyme name: WfaL Group: WbbL UniProt ID: Q2VJ21 CAZy family: GT2 Gene name: wfaL Gene cluster ID: DQ109552 | Synthesized dimer: aLRhap(1-3)aDGlcpN Status: predicted in silico
Confirmation methods: in silico ID: 2870 | Organism (ID 1575): Escherichia coli O139 Full structure (ID 2755): CSDB ID(s): 1881, 4172, 20705 Molecule role: O-antigen | Wang et al. 2005 DOI: 10.1016/j.vetmic.2005.10.006 |
| Enzyme name: WfaI UniProt ID: Q2VJ25 CAZy family: GT2 Gene name: wfaI Gene cluster ID: DQ109552 | Synthesized dimer: aLRhap(1-2)aLRhap Status: predicted in silico
Confirmation methods: in silico ID: 2871 | Organism (ID 1575): Escherichia coli O139 Full structure (ID 2755): CSDB ID(s): 1881, 4172, 20705 Molecule role: O-antigen | |
| Synthesized dimer: aLRhap(1-3)aLRhap Status: predicted in silico
Confirmation methods: in silico ID: 2872 | Organism (ID 1575): Escherichia coli O139 Full structure (ID 2755): CSDB ID(s): 1881, 4172, 20705 Molecule role: O-antigen | ||
| Enzyme name: WfaK UniProt ID: Q2VJ22 CAZy family: GT4 Gene name: wfaK Gene cluster ID: DQ109552 | Synthesized dimer: aDGalpA(1-2)aLRhap Status: predicted in silico
Confirmation methods: in silico ID: 2873 | Organism (ID 1575): Escherichia coli O139 Full structure (ID 2755): CSDB ID(s): 1881, 4172, 20705 Molecule role: O-antigen | |
| Enzyme name: WfaJ UniProt ID: Q2VJ23 CAZy family: GT4 Gene name: wfaJ Gene cluster ID: DQ109552 | Synthesized dimer: aLRhap(1-4)aDGalpA Status: predicted in silico
Confirmation methods: in silico ID: 2874 | Organism (ID 1575): Escherichia coli O139 Full structure (ID 2755): CSDB ID(s): 1881, 4172, 20705 Molecule role: O-antigen | |
| Enzyme name: RfbG Group: RfbG UniProt ID: B5L480 CAZy family: GT2 Gene name: rfbG Gene cluster ID: AB972413 | Synthesized dimer: aLRhap(1-3)bDGlcpN Status: predicted in silico
Confirmation methods: in silico ID: 2875 | Organism (ID 6178): Escherichia coli O13 Full structure (ID 9154): CSDB ID(s): 1515, 11565, 28868 Molecule role: O-antigen | Iguchi et al. 2015 DOI: 10.1093/dnares/dsu043 |
| Enzyme name: RfbF Group: RfbF UniProt ID: B5L479 CAZy family: GT2 Gene name: rfbF Gene cluster ID: AB972413 | Synthesized dimer: aLRhap(1-3)aLRhap Status: predicted in silico
Confirmation methods: in silico ID: 2876 | Organism (ID 6178): Escherichia coli O13 Full structure (ID 9154): CSDB ID(s): 1515, 11565, 28868 Molecule role: O-antigen | |
| Enzyme name: RfbF UniProt ID: B5L479 CAZy family: GT2 Gene name: rfbF Gene cluster ID: AB972413 | Synthesized dimer: aLRhap(1-2)aLRhap Status: predicted in silico
Confirmation methods: in silico ID: 2877 | Organism (ID 6178): Escherichia coli O13 Full structure (ID 9154): CSDB ID(s): 1515, 11565, 28868 Molecule role: O-antigen | |
| Enzyme name: RfbG Group: RfbG UniProt ID: B5L480 CAZy family: GT2 Gene name: rfbG Gene cluster ID: AB972413 | Synthesized dimer: aLRhap(1-3)bDGlcpN Status: predicted in silico
Confirmation methods: in silico ID: 2878 | Organism (ID 4933): Escherichia coli O129 Full structure (ID 9156): CSDB ID(s): 1870, 11563, 27517, 28566 Molecule role: O-antigen | |
| Enzyme name: RfbF Group: RfbF UniProt ID: B5L479 CAZy family: GT2 Gene name: rfbF Gene cluster ID: AB972413 | Synthesized dimer: aLRhap(1-3)aLRhap Status: predicted in silico
Confirmation methods: in silico ID: 2879 | Organism (ID 4933): Escherichia coli O129 Full structure (ID 9156): CSDB ID(s): 1870, 11563, 27517, 28566 Molecule role: O-antigen | |
| Enzyme name: RfbF UniProt ID: B5L479 CAZy family: GT2 Gene name: rfbF Gene cluster ID: AB972413 | Synthesized dimer: aLRhap(1-2)aLRhap Status: predicted in silico
Confirmation methods: in silico ID: 2880 | Organism (ID 4933): Escherichia coli O129 Full structure (ID 9156): CSDB ID(s): 1870, 11563, 27517, 28566 Molecule role: O-antigen | |
| Enzyme name: RfbG Group: RfbG UniProt ID: B5L480 CAZy family: GT2 Gene name: rfbG Gene cluster ID: AB972413 | Synthesized dimer: aLRhap(1-3)bDGlcpN Status: predicted in silico
Confirmation methods: in silico ID: 2881 | Organism (ID 6169): Escherichia coli O135 Full structure (ID 3594): CSDB ID(s): 1877, 3905, 3999, 6421, 11564, 11762, 20973, 23916, 24173, 26506, 27516, 28565, 30485, 30486, 30541, 30779, 108652 Molecule role: O-antigen | |
| Enzyme name: RfbF Group: RfbF UniProt ID: B5L487 CAZy family: GT2 Gene name: rfbF Gene cluster ID: AB972422 | Synthesized dimer: aLRhap(1-3)aLRhap Status: predicted in silico
Confirmation methods: in silico ID: 2882 | Organism (ID 6169): Escherichia coli O135 Full structure (ID 3594): CSDB ID(s): 1877, 3905, 3999, 6421, 11564, 11762, 20973, 23916, 24173, 26506, 27516, 28565, 30485, 30486, 30541, 30779, 108652 Molecule role: O-antigen | |
| Enzyme name: RfbF UniProt ID: B5L487 CAZy family: GT2 Gene name: rfbF Gene cluster ID: AB972422 | Synthesized dimer: aLRhap(1-2)aLRhap Status: predicted in silico
Confirmation methods: in silico ID: 2883 | Organism (ID 6169): Escherichia coli O135 Full structure (ID 3594): CSDB ID(s): 1877, 3905, 3999, 6421, 11564, 11762, 20973, 23916, 24173, 26506, 27516, 28565, 30485, 30486, 30541, 30779, 108652 Molecule role: O-antigen | |
| Enzyme name: Orf12 Group: RfbG UniProt ID: A0A0A8J483 Gene cluster ID: AB811623 | Synthesized dimer: aLRhap(1-3)bDGlcpN Status: predicted in silico
Confirmation methods: in silico ID: 2884 | Organism (ID 4516): Escherichia coli O49 Full structure (ID 8026): CSDB ID(s): 1556, 3379, 21169 Molecule role: O-antigen | Perepelov et al. 2008 |
| Enzyme name: WbsY Group: RfbG UniProt ID: B5L3G2 CAZy family: GT2 Gene name: wbsY Gene cluster ID: EU294171 | Synthesized dimer: aLRhap(1-3)bDGlcpN Status: predicted in silico
Confirmation methods: in silico ID: 2885 | Organism (ID 4052): Escherichia coli O105 Full structure (ID 2443): CSDB ID(s): 1844, 2579 Molecule role: O-antigen | Liu et al. 2008 DOI: 10.1111/j.1574-6976.2008.00114.x |
| Enzyme name: WbsX UniProt ID: B5L3G1 Gene name: wbsX Gene cluster ID: EU294171 | Synthesized dimer: bLRhap(1-4)aLRhap Status: predicted in silico
Confirmation methods: in silico ID: 2886 | Organism (ID 4052): Escherichia coli O105 Full structure (ID 2443): CSDB ID(s): 1844, 2579 Molecule role: O-antigen | |
| Enzyme name: WbsW UniProt ID: B5L3G0 CAZy family: GT2 Gene name: wbsW Gene cluster ID: EU294171 | Synthesized dimer: aLRhap(1-3)bLRhap Status: predicted in silico
Confirmation methods: in silico ID: 2887 | Organism (ID 4052): Escherichia coli O105 Full structure (ID 2443): CSDB ID(s): 1844, 2579 Molecule role: O-antigen | |
| Enzyme name: WbsV UniProt ID: B5L3F8 Gene name: wbsV Gene cluster ID: EU294171 | Synthesized dimer: aDGlcpA(1-2)aLRhap Status: predicted in silico
Confirmation methods: in silico ID: 2888 | Organism (ID 4052): Escherichia coli O105 Full structure (ID 2443): CSDB ID(s): 1844, 2579 Molecule role: O-antigen | |
| Enzyme name: WbsZ UniProt ID: B5L3G3 Gene name: wbsZ Gene cluster ID: EU294171 | Synthesized dimer: bDRibf(1-4)aDGlcpA Status: predicted in silico
Confirmation methods: in silico ID: 2889 | Organism (ID 4052): Escherichia coli O105 Full structure (ID 2443): CSDB ID(s): 1844, 2579 Molecule role: O-antigen | |
| Enzyme name: WfgK Group: RfbG UniProt ID: B5L3D2 CAZy family: GT2 Gene name: wfgK Gene cluster ID: EU294168 | Synthesized dimer: aLRhap(1-3)bDGlcpN Status: predicted in silico
Confirmation methods: in silico ID: 2890 | Organism (ID 4233): Escherichia coli O150 Full structure (ID 7423): CSDB ID(s): 715, 1891, 3647, 11787, 23079 Molecule role: O-antigen | |
| Enzyme name: WfgI UniProt ID: B5L3D1 CAZy family: GT2 Gene name: wfgI Gene cluster ID: EU294168 | Synthesized dimer: aLRhap(1-3)aLRhap Status: predicted in silico
Confirmation methods: in silico ID: 2891 | Organism (ID 4233): Escherichia coli O150 Full structure (ID 7423): CSDB ID(s): 715, 1891, 3647, 11787, 23079 Molecule role: O-antigen | |
| Synthesized dimer: aLRhap(1-2)aLRhap Status: predicted in silico
Confirmation methods: in silico ID: 2892 | Organism (ID 4233): Escherichia coli O150 Full structure (ID 7423): CSDB ID(s): 715, 1891, 3647, 11787, 23079 Molecule role: O-antigen | ||
| Enzyme name: WfgH UniProt ID: B5L3D0 Gene name: wfgH Gene cluster ID: EU294168 | Synthesized dimer: bDGlcpN(1-2)aLRhap Status: predicted in silico
Confirmation methods: in silico ID: 2893 | Organism (ID 4233): Escherichia coli O150 Full structure (ID 7423): CSDB ID(s): 715, 1891, 3647, 11787, 23079 Molecule role: O-antigen | |
| Enzyme name: Orf10 Group: RfbG UniProt ID: A0A0M4FPT5 Gene cluster ID: KR071853 | Synthesized dimer: aLRhap(1-3)bDGlcpN Status: predicted in silico
Confirmation methods: in silico ID: 2894 | Organism (ID 17069): Escherichia coli O188 (G5413) Full structure (ID 11899): CSDB ID(s): 30593 Molecule role: O-antigen | Chen et al. 2015 DOI: 10.1099/mic.0.000136 |
| Enzyme name: Orf9 UniProt ID: A0A0M4F994 Gene cluster ID: KR071853 | Synthesized dimer: bDGlcp(1-3)aLRhap Status: predicted in silico
Confirmation methods: in silico ID: 2895 | Organism (ID 17069): Escherichia coli O188 (G5413) Full structure (ID 11899): CSDB ID(s): 30593 Molecule role: O-antigen | |
| Enzyme name: Orf8 UniProt ID: A0A0M4FII6 Gene cluster ID: KR071853 | Synthesized dimer: aDGlcpN(1-2)bDGlcp Status: predicted in silico
Confirmation methods: in silico ID: 2896 | Organism (ID 17069): Escherichia coli O188 (G5413) Full structure (ID 11899): CSDB ID(s): 30593 Molecule role: O-antigen | |
| Enzyme name: Orf6 UniProt ID: A0A0M4FJD3 Gene cluster ID: KR071853 | Synthesized dimer: bLRhap(1-4)aDGlcpN Status: predicted in silico
Confirmation methods: in silico ID: 2897 | Organism (ID 17069): Escherichia coli O188 (G5413) Full structure (ID 11899): CSDB ID(s): 30593 Molecule role: O-antigen | |
| Enzyme name: Orf8 UniProt ID: A0A0A8J5S3 Gene cluster ID: AB812064 | Synthesized dimer: aLRhap(1-3)aDGalpN Status: predicted in silico
Confirmation methods: in silico ID: 2898 | Organism (ID 6563): Escherichia coli O154 Full structure (ID 11389): CSDB ID(s): 696, 1895, 3908 Molecule role: O-antigen | Perepelov et al. 2013c DOI: 10.1016/j.carres.2013.06.004 |
| Enzyme name: Orf10 UniProt ID: A0A0A8J688 Gene cluster ID: AB812064 | Synthesized dimer: aLRhap(1-3)aLRhap Status: predicted in silico
Confirmation methods: in silico ID: 2899 | Organism (ID 6563): Escherichia coli O154 Full structure (ID 11389): CSDB ID(s): 696, 1895, 3908 Molecule role: O-antigen | |
| Synthesized dimer: aLRhap(1-3)aLRhap Status: predicted in silico
Confirmation methods: in silico ID: 2900 | Organism (ID 6563): Escherichia coli O154 Full structure (ID 11389): CSDB ID(s): 696, 1895, 3908 Molecule role: O-antigen | ||
| Enzyme name: Orf6 UniProt ID: A0A0A8J6V8 Gene cluster ID: AB812064 | Synthesized dimer: aDManpN(1-3)aLRhap Status: predicted in silico
Confirmation methods: in silico ID: 2901 | Organism (ID 6563): Escherichia coli O154 Full structure (ID 11389): CSDB ID(s): 696, 1895, 3908 Molecule role: O-antigen | |
| Enzyme name: WekO Group: WbuV UniProt ID: D7PDU5 CAZy family: GT4 Gene name: wekO Gene cluster ID: GU299791 | Synthesized dimer: bLRhap(1-4)bDGlcpN Status: predicted in silico
Confirmation methods: in silico ID: 2902 | Organism (ID 17070): Escherichia coli O1a Full structure (ID 970): CSDB ID(s): 1067, 7222, 8481, 10914, 12690, 108682, 110886, 112956, 116148 Molecule role: O-antigen | Li et al. 2010b DOI: 10.1016/j.mimet.2010.04.008 |
| Enzyme name: WekN UniProt ID: D7PDU4 CAZy family: GT2 Gene name: wekN Gene cluster ID: GU299791 | Synthesized dimer: aLRhap(1-3)bLRhap Status: predicted in silico
Confirmation methods: in silico ID: 2903 | Organism (ID 17070): Escherichia coli O1a Full structure (ID 970): CSDB ID(s): 1067, 7222, 8481, 10914, 12690, 108682, 110886, 112956, 116148 Molecule role: O-antigen | |
| Synthesized dimer: aLRhap(1-3)aLRhap Status: predicted in silico
Confirmation methods: in silico ID: 2904 | Organism (ID 17070): Escherichia coli O1a Full structure (ID 970): CSDB ID(s): 1067, 7222, 8481, 10914, 12690, 108682, 110886, 112956, 116148 Molecule role: O-antigen | ||
| Enzyme name: WekM UniProt ID: D7PDU2 Gene name: wekM Gene cluster ID: GU299791 | Synthesized dimer: bDManpN(1-2)aLRhap Status: predicted in silico
Confirmation methods: in silico ID: 2905 | Organism (ID 17070): Escherichia coli O1a Full structure (ID 970): CSDB ID(s): 1067, 7222, 8481, 10914, 12690, 108682, 110886, 112956, 116148 Molecule role: O-antigen | |
| Enzyme name: WegR Group: WbuV UniProt ID: B3U3Q4 CAZy family: GT4 Gene name: wegR Gene cluster ID: GU299792 | Synthesized dimer: bLRhap(1-4)bDGlcpN Status: predicted in silico
Confirmation methods: in silico ID: 2906 | Organism (ID 2928): Escherichia coli O2 Full structure (ID 13226): CSDB ID(s): 1500, 8518, 12691, 12832, 27346, 108685, 115036 Molecule role: O-antigen | |
| Enzyme name: WegQ UniProt ID: D7PDV6 CAZy family: GT2 Gene name: wekQ Gene cluster ID: GU299792 | Synthesized dimer: aLRhap(1-3)bLRhap Status: predicted in silico
Confirmation methods: in silico ID: 2907 | Organism (ID 2928): Escherichia coli O2 Full structure (ID 13226): CSDB ID(s): 1500, 8518, 12691, 12832, 27346, 108685, 115036 Molecule role: O-antigen | |
| Synthesized dimer: aLRhap(1-2)aLRhap Status: predicted in silico
Confirmation methods: in silico ID: 2908 | Organism (ID 2928): Escherichia coli O2 Full structure (ID 13226): CSDB ID(s): 1500, 8518, 12691, 12832, 27346, 108685, 115036 Molecule role: O-antigen | ||
| Enzyme name: WegP UniProt ID: B3U3Q0 CAZy family: GT4 Gene name: wegP Gene cluster ID: GU299792 | Synthesized dimer: aDFucp3N(1-2)aLRhap Status: predicted in silico
Confirmation methods: in silico ID: 2909 | Organism (ID 2928): Escherichia coli O2 Full structure (ID 13226): CSDB ID(s): 1500, 8518, 12691, 12832, 27346, 108685, 115036 Molecule role: O-antigen | |
| Enzyme name: WbdS Group: WbuV UniProt ID: B7SFZ1 CAZy family: GT4 Gene name: wbdS Gene cluster ID: AB812021 | Synthesized dimer: bLRhap(1-4)bDGlcpN Status: predicted in silico
Confirmation methods: in silico ID: 2910 | Organism (ID 8183): Escherichia coli O53 Full structure (ID 7898): CSDB ID(s): 1560, 23045, 23208 Molecule role: O-antigen | Iguchi et al. 2015 DOI: 10.1093/dnares/dsu043 |
| Enzyme name: WbdE UniProt ID: B7SFY6 CAZy family: GT2 Gene name: wbdE Gene cluster ID: AB812021 | Synthesized dimer: aLRhap(1-4)bDGlcpA Status: predicted in silico
Confirmation methods: in silico ID: 2911 | Organism (ID 8183): Escherichia coli O53 Full structure (ID 7898): CSDB ID(s): 1560, 23045, 23208 Molecule role: O-antigen | |
| Enzyme name: WbuV Group: WbuV UniProt ID: Q45XG3 CAZy family: GT4 Gene name: wbuV Gene cluster ID: DQ868764 | Synthesized dimer: bLRhap(1-4)bDGlcpN Status: predicted in silico
Confirmation methods: in silico ID: 2912 | Organism (ID 2473): Escherichia coli O149 Full structure (ID 4213): CSDB ID(s): 1890, 5130, 10164, 20688, 22687, 108676 Molecule role: O-antigen | Han et al. 2007 DOI: 10.1128/AEM.01820-06 |
| Enzyme name: WbbU UniProt ID: Q45XG4 CAZy family: GT2 Gene name: wbuU Gene cluster ID: DQ868764 | Synthesized dimer: bDGlcpN(1-3)bLRhap Status: predicted in silico
Confirmation methods: in silico ID: 2913 | Organism (ID 2473): Escherichia coli O149 Full structure (ID 4213): CSDB ID(s): 1890, 5130, 10164, 20688, 22687, 108676 Molecule role: O-antigen | |
| Enzyme name: WfcU Group: WbuV UniProt ID: A0A0A8J718 Gene cluster ID: AB812077 | Synthesized dimer: bLRhap(1-4)aDGlcpN Status: predicted in silico
Confirmation methods: in silico ID: 2914 | Organism (ID 6230): Escherichia coli O180 Full structure (ID 9909): CSDB ID(s): 704, 1922, 3912, 26376, 27345, 27662 Molecule role: O-antigen | Wang et al. 2012b DOI: 10.1093/glycob/cws098 |
| Enzyme name: WfcT UniProt ID: I6U4Z9 Gene name: wfcT Gene cluster ID: AB812077 | Synthesized dimer: aLRhap(1-3)bLRhap Status: predicted in silico
Confirmation methods: in silico ID: 2915 | Organism (ID 6230): Escherichia coli O180 Full structure (ID 9909): CSDB ID(s): 704, 1922, 3912, 26376, 27345, 27662 Molecule role: O-antigen | |
| Enzyme name: WfcS UniProt ID: A0A0A8J6I3 Gene cluster ID: AB812077 | Synthesized dimer: bDManpN3NA(1-2)aLRhap Status: predicted in silico
Confirmation methods: in silico ID: 2916 | Organism (ID 6230): Escherichia coli O180 Full structure (ID 9909): CSDB ID(s): 704, 1922, 3912, 26376, 27345, 27662 Molecule role: O-antigen | |
| Enzyme name: WdaG Group: WdaG UniProt ID: Q9EXY1 CAZy family: GT2 Gene name: wdaG Gene cluster ID: HQ388393 | Synthesized dimer: aLFucp(1-3)bDGalpN Status: predicted in silico
Confirmation methods: in silico ID: 2917 | Organism (ID 6688): Escherichia coli O11 Full structure (ID 11659): CSDB ID(s): 1513, 26884 Molecule role: O-antigen | Li et al. 2011 DOI: 10.1111/j.1574-695X.2010.00771.x |
| Enzyme name: WdaF Group: WdaF UniProt ID: E7DWQ4 Gene name: wdaF Gene cluster ID: HQ388393 | Synthesized dimer: aDManp(1-3)aLFucp Status: predicted in silico
Confirmation methods: in silico ID: 2918 | Organism (ID 6688): Escherichia coli O11 Full structure (ID 11659): CSDB ID(s): 1513, 26884 Molecule role: O-antigen | |
| Enzyme name: WdaE UniProt ID: E7DWQ2 Gene name: wdaE Gene cluster ID: HQ388393 | Synthesized dimer: aDGalpN(1-6)aDManp Status: predicted in silico
Confirmation methods: in silico ID: 2919 | Organism (ID 6688): Escherichia coli O11 Full structure (ID 11659): CSDB ID(s): 1513, 26884 Molecule role: O-antigen | |
| Enzyme name: WdaD UniProt ID: E7DWQ0 Gene name: wdaD Gene cluster ID: HQ388393 | Synthesized dimer: aLFucp(1-3)aDGalpN Status: predicted in silico
Confirmation methods: in silico ID: 2920 | Organism (ID 6688): Escherichia coli O11 Full structure (ID 11659): CSDB ID(s): 1513, 26884 Molecule role: O-antigen | |
| Enzyme name: Orf11 Group: WdaG UniProt ID: A0A0A8J6C8 Gene cluster ID: AB811617 | Synthesized dimer: aLFucp(1-3)bDGlcpN Status: predicted in silico
Confirmation methods: in silico ID: 2921 | Organism (ID 6238): Escherichia coli O41 Full structure (ID 10865): CSDB ID(s): 1548, 3839 Molecule role: O-antigen | Zhu et al. 2012 DOI: 10.1016/j.carres.2011.12.009 |
| Enzyme name: Orf5 UniProt ID: A0A0A8J4F6 Gene cluster ID: AB811617 | Synthesized dimer: aLFucp(1-4)bDGlcpN Status: predicted in silico
Confirmation methods: in silico ID: 2922 | Organism (ID 6238): Escherichia coli O41 Full structure (ID 10865): CSDB ID(s): 1548, 3839 Molecule role: O-antigen | |
| Enzyme name: Orf11 Group: WdaG UniProt ID: A0A0A8J4N3 Gene cluster ID: AB811619 | Synthesized dimer: aLFucp(1-3)bDGalpN Status: predicted in silico
Confirmation methods: in silico ID: 2923 | Organism (ID 6947): Escherichia coli O43 Full structure (ID 11977): CSDB ID(s): 1381, 1550 Molecule role: O-antigen | Perepelov et al. 2015d DOI: 10.1016/j.carres.2015.08.008 |
| Enzyme name: Orf6 Group: WdaF UniProt ID: A0A0A8J4M7 Gene cluster ID: AB811619 | Synthesized dimer: aDManp(1-3)aLFucp Status: predicted in silico
Confirmation methods: in silico ID: 2924 | Organism (ID 6947): Escherichia coli O43 Full structure (ID 11977): CSDB ID(s): 1381, 1550 Molecule role: O-antigen | |
| Enzyme name: Orf4 UniProt ID: A0A0A8J3X3 Gene cluster ID: AB811619 | Synthesized dimer: bDManp(1-3)aDManp Status: predicted in silico
Confirmation methods: in silico ID: 2925 | Organism (ID 6947): Escherichia coli O43 Full structure (ID 11977): CSDB ID(s): 1381, 1550 Molecule role: O-antigen | |
| Enzyme name: Orf2 UniProt ID: A0A0A8J3F1 Gene cluster ID: AB811619 | Synthesized dimer: aLFucp(1-3)bDManp Status: predicted in silico
Confirmation methods: in silico ID: 2926 | Organism (ID 6947): Escherichia coli O43 Full structure (ID 11977): CSDB ID(s): 1381, 1550 Molecule role: O-antigen | |
| Enzyme name: Orf12 Group: WdaG UniProt ID: A0A0A8J7H6 Gene name: ERS085366_02138 Gene cluster ID: AB812036 | Synthesized dimer: aLFucp(1-3)bDGlcpN Status: predicted in silico
Confirmation methods: in silico ID: 2927 | Organism (ID 8190): Escherichia coli O84 Full structure (ID 12281): CSDB ID(s): 1590, 5131 Molecule role: O-antigen | Iguchi et al. 2015 DOI: 10.1093/dnares/dsu043 |
| Enzyme name: Orf6 UniProt ID: A0A0A8J4G0 Gene cluster ID: AB812036 | Synthesized dimer: P(?-4)aDGlcp Status: predicted in silico
Confirmation methods: in silico ID: 2928 | Organism (ID 8190): Escherichia coli O84 Full structure (ID 12281): CSDB ID(s): 1590, 5131 Molecule role: O-antigen | |
| Enzyme name: Orf13 Group: WdaG UniProt ID: A0A0A8J8W3 Gene cluster ID: AB812065 | Synthesized dimer: aLFucp(1-3)bDGlcpN Status: predicted in silico
Confirmation methods: in silico ID: 2929 | Organism (ID 7140): Escherichia coli O156 Full structure (ID 12325): CSDB ID(s): 9135 Molecule role: O-antigen | |
| Enzyme name: Orf8 UniProt ID: A0A0A8J8V7 Gene name: gft1 Gene cluster ID: AB812065 | Synthesized dimer: aDGalp(1-3)aLFucp Status: predicted in silico
Confirmation methods: in silico ID: 2930 | Organism (ID 7140): Escherichia coli O156 Full structure (ID 12325): CSDB ID(s): 9135 Molecule role: O-antigen | |
| Enzyme name: Orf7 UniProt ID: A0A0A8J5T9 Gene cluster ID: AB812065 | Synthesized dimer: aLFucp(1-6)aDGalp Status: predicted in silico
Confirmation methods: in silico ID: 2931 | Organism (ID 7140): Escherichia coli O156 Full structure (ID 12325): CSDB ID(s): 9135 Molecule role: O-antigen | |
| Enzyme name: Orf5 UniProt ID: A0A0A8J6X5 Gene name: mshA Gene cluster ID: AB812065 | Synthesized dimer: aDGalp(1-3)aLFucp Status: predicted in silico
Confirmation methods: in silico ID: 2932 | Organism (ID 7140): Escherichia coli O156 Full structure (ID 12325): CSDB ID(s): 9135 Molecule role: O-antigen | |
| Enzyme name: WfgS Group: WdaG UniProt ID: B5L3M6 CAZy family: GT2 Gene name: wfgS Gene cluster ID: EU294176 | Synthesized dimer: aLFucp(1-3)bDGlcpN Status: predicted in silico
Confirmation methods: in silico ID: 2933 | Organism (ID 1034): Escherichia coli O159 Full structure (ID 2723): CSDB ID(s): 3161 Molecule role: O-antigen | Liu et al. 2008 DOI: 10.1111/j.1574-6976.2008.00114.x |
| Enzyme name: WfgR UniProt ID: B5L3M1 CAZy family: GT4 Gene name: wfgR Gene cluster ID: EU294176 | Synthesized dimer: aDGalpA(1-3)aLFucp Status: predicted in silico
Confirmation methods: in silico ID: 2934 | Organism (ID 1034): Escherichia coli O159 Full structure (ID 2723): CSDB ID(s): 3161 Molecule role: O-antigen | |
| Enzyme name: WfgQ UniProt ID: B5L3L9 Gene name: wfgQ Gene cluster ID: EU294176 | Synthesized dimer: bDGlcpN(1-4)aDGalpA Status: predicted in silico
Confirmation methods: in silico ID: 2935 | Organism (ID 1034): Escherichia coli O159 Full structure (ID 2723): CSDB ID(s): 3161 Molecule role: O-antigen | |
| Enzyme name: WfgP UniProt ID: B5L3L8 CAZy family: GT2 Gene name: wfgP Gene cluster ID: EU294176 | Synthesized dimer: aLFucp(1-4)bDGlcpN Status: predicted in silico
Confirmation methods: in silico ID: 2936 | Organism (ID 1034): Escherichia coli O159 Full structure (ID 2723): CSDB ID(s): 3161 Molecule role: O-antigen | |
| Enzyme name: WfeY Group: WdaG UniProt ID: B5L3R8 CAZy family: GT2 Gene name: wfeY Gene cluster ID: EU296403 | Synthesized dimer: aLFucp(1-3)bDGlcpN Status: predicted in silico
Confirmation methods: in silico ID: 2937 | Organism (ID 4231): Escherichia coli O168 Full structure (ID 8027): CSDB ID(s): 21050, 23210, 26212 Molecule role: O-antigen | |
| Enzyme name: WfeX UniProt ID: B5L3R3 CAZy family: GT4 Gene name: wfeX Gene cluster ID: EU296403 | Synthesized dimer: aDGlcpA(1-3)aLFucp Status: predicted in silico
Confirmation methods: in silico ID: 2938 | Organism (ID 4231): Escherichia coli O168 Full structure (ID 8027): CSDB ID(s): 21050, 23210, 26212 Molecule role: O-antigen | |
| Enzyme name: WfeW UniProt ID: B5L3R1 CAZy family: GT4 Gene name: wfeW Gene cluster ID: EU296403 | Synthesized dimer: aDGlcpN(1-4)aDGlcpA Status: predicted in silico
Confirmation methods: in silico ID: 2939 | Organism (ID 4231): Escherichia coli O168 Full structure (ID 8027): CSDB ID(s): 21050, 23210, 26212 Molecule role: O-antigen | |
| Enzyme name: WfeV UniProt ID: B5L3R0 CAZy family: GT2 Gene name: wfeV Gene cluster ID: EU296403 | Synthesized dimer: aLFucp(1-3)aDGlcpN Status: predicted in silico
Confirmation methods: in silico ID: 2940 | Organism (ID 4231): Escherichia coli O168 Full structure (ID 8027): CSDB ID(s): 21050, 23210, 26212 Molecule role: O-antigen | |
| Enzyme name: Orf14 UniProt ID: A0A0A8J7P3 Gene cluster ID: AB812080 | Synthesized dimer: aLFucp(1-3)aDGalpN Status: predicted in silico
Confirmation methods: in silico ID: 2941 | Organism (ID 7182): Escherichia coli O184 Full structure (ID 13836): CSDB ID(s): 1926 Molecule role: O-antigen | Iguchi et al. 2015 DOI: 10.1093/dnares/dsu043 |
| Enzyme name: Orf9 UniProt ID: A0A0A8J7P0 Gene cluster ID: AB812080 | Synthesized dimer: aDManp(1-3)aLFucp Status: predicted in silico
Confirmation methods: in silico ID: 2942 | Organism (ID 7182): Escherichia coli O184 Full structure (ID 13836): CSDB ID(s): 1926 Molecule role: O-antigen | |
| Enzyme name: Orf7 UniProt ID: A0A0A8J9M6 Gene cluster ID: AB812080 | Synthesized dimer: aDFucp3N(1-3)aDManp Status: predicted in silico
Confirmation methods: in silico ID: 2943 | Organism (ID 7182): Escherichia coli O184 Full structure (ID 13836): CSDB ID(s): 1926 Molecule role: O-antigen | |
| Enzyme name: WfaE Group: WfaE UniProt ID: Q1AL79 Gene name: wfaE Gene cluster ID: DQ069297 | Synthesized dimer: aL6dTalp(1-3)aDGlcpN Status: predicted in silico
Confirmation methods: in silico ID: 2944 Notes: probably can act on bDGlcpN as well | Organism (ID 1412): Escherichia coli O66 Full structure (ID 2401): CSDB ID(s): 1573, 20699 Molecule role: O-antigen | Cnehg et al. 2007 |
| Enzyme name: WfaC Group: WfaC UniProt ID: Q1AL81 CAZy family: GT2 Gene name: wbaC Gene cluster ID: DQ069297 | Synthesized dimer: bDGlcp(1-3)aL6dTalp Status: predicted in silico
Confirmation methods: in silico ID: 2945 | Organism (ID 1412): Escherichia coli O66 Full structure (ID 2401): CSDB ID(s): 1573, 20699 Molecule role: O-antigen | |
| Enzyme name: WfaB UniProt ID: Q1AL82 CAZy family: GT4 Gene name: wfaB Gene cluster ID: DQ069297 | Synthesized dimer: aDGlcpN(1-2)bDGlcp Status: predicted in silico
Confirmation methods: in silico ID: 2946 | Organism (ID 1412): Escherichia coli O66 Full structure (ID 2401): CSDB ID(s): 1573, 20699 Molecule role: O-antigen | |
| Enzyme name: WfaA UniProt ID: Q1AL84 Gene name: wfaA Gene cluster ID: DQ069297 | Synthesized dimer: bDManp(1-3)aDGlcpN Status: predicted in silico
Confirmation methods: in silico ID: 2947 | Organism (ID 1412): Escherichia coli O66 Full structure (ID 2401): CSDB ID(s): 1573, 20699 Molecule role: O-antigen | |
| Enzyme name: WeiT Group: WfaE UniProt ID: E5FGE1 Gene name: weiT Gene cluster ID: HM485572 | Synthesized dimer: aL6dTalp(1-3)bDGlcpN Status: predicted in silico
Confirmation methods: in silico ID: 2948 | Organism (ID 5366): Escherichia coli O109 Full structure (ID 9757): CSDB ID(s): 1848 Molecule role: O-antigen | Perepelov et al. 2011e DOI: 10.1111/j.1574-695X.2010.00745.x |
| Enzyme name: WeiM UniProt ID: E5FGD2 CAZy family: GT4 Gene name: weiM Gene cluster ID: HM485572 | Synthesized dimer: aDGlcp(1-3)aL6dTalp Status: predicted in silico
Confirmation methods: in silico ID: 2949 | Organism (ID 5366): Escherichia coli O109 Full structure (ID 9757): CSDB ID(s): 1848 Molecule role: O-antigen | |
| Enzyme name: WeiN UniProt ID: E5FGD3 CAZy family: GT2 Gene name: weiN Gene cluster ID: HM485572 | Synthesized dimer: bLRhapN3N(1-3)aDGlcp Status: predicted in silico
Confirmation methods: in silico ID: 2950 | Organism (ID 5366): Escherichia coli O109 Full structure (ID 9757): CSDB ID(s): 1848 Molecule role: O-antigen | |
| Enzyme name: WbhW UniProt ID: Q5DIE5 Gene name: wbhW Gene cluster ID: AY771223 | Synthesized dimer: aL6dTalp(1-3)aDFucpN Status: predicted in silico
Confirmation methods: in silico ID: 2951 | Organism (ID 1410): Escherichia coli O45 Full structure (ID 2375): CSDB ID(s): 1552, 5129, 20656 Molecule role: O-antigen | DebRoy et al. 2005 DOI: 10.1128/AEM.71.8.4919-4924.2005 |
| Enzyme name: WbhU UniProt ID: Q5DIE8 CAZy family: GT2 Gene name: wbhU Gene cluster ID: AY771223 | Synthesized dimer: bDGlcp(1-3)aL6dTalp Status: predicted in silico
Confirmation methods: in silico ID: 2952 | Organism (ID 1410): Escherichia coli O45 Full structure (ID 2375): CSDB ID(s): 1552, 5129, 20656 Molecule role: O-antigen | |
| Enzyme name: WbwW Group: WbwW UniProt ID: A5WZ58 CAZy family: GT4 Gene name: wbwW Gene cluster ID: DQ180602 | Synthesized dimer: aLQuipN(1-3)bDGlcpN Status: predicted in silico
Confirmation methods: in silico ID: 2953 | Organism (ID 2629): Escherichia coli O98 Full structure (ID 4507): CSDB ID(s): 1836, 20670, 21593, 31531, 31829 Molecule role: O-antigen | Cunneen et al. 2007 DOI: 10.1093/molbev/msm058 |
| Enzyme name: WbwV UniProt ID: A5WZ54 CAZy family: GT4 Gene name: wbwV Gene cluster ID: DQ180602 | Synthesized dimer: aDGalpNA(1-3)aLQuipN Status: predicted in silico
Confirmation methods: in silico ID: 2954 | Organism (ID 2629): Escherichia coli O98 Full structure (ID 4507): CSDB ID(s): 1836, 20670, 21593, 31531, 31829 Molecule role: O-antigen | |
| Enzyme name: WbwU UniProt ID: A5WZ53 Gene name: wbwU Gene cluster ID: DQ180602 | Synthesized dimer: aLQuipN(1-4)aDGalpNA Status: predicted in silico
Confirmation methods: in silico ID: 2955 | Organism (ID 2629): Escherichia coli O98 Full structure (ID 4507): CSDB ID(s): 1836, 20670, 21593, 31531, 31829 Molecule role: O-antigen | |
| Enzyme name: WbwH Group: WbwW UniProt ID: A0A0A8J7V4 Gene cluster ID: AB972419 | Synthesized dimer: aLQuipN(1-3)aDGlcpN Status: predicted in silico
Confirmation methods: in silico ID: 2956 | Organism (ID 4627): Escherichia coli O123 Full structure (ID 8438): CSDB ID(s): 697, 1862, 3393, 11726, 21165, 23676, 30386 Molecule role: O-antigen | Iguchi et al. 2015 DOI: 10.1093/dnares/dsu043 |
| Enzyme name: WfbF UniProt ID: A3E2C8 CAZy family: GT4 Gene name: wfbF Gene cluster ID: AB972419 | Synthesized dimer: aDGlcpN(1-3)aLQuipN Status: predicted in silico
Confirmation methods: in silico ID: 2957 | Organism (ID 4627): Escherichia coli O123 Full structure (ID 8438): CSDB ID(s): 697, 1862, 3393, 11726, 21165, 23676, 30386 Molecule role: O-antigen | |
| Enzyme name: WfbE UniProt ID: A3E2C6 CAZy family: GT2 Gene name: wfbE Gene cluster ID: AB972419 | Synthesized dimer: bDQuip4N(1-6)aDGlcpN Status: predicted in silico
Confirmation methods: in silico ID: 2958 | Organism (ID 4627): Escherichia coli O123 Full structure (ID 8438): CSDB ID(s): 697, 1862, 3393, 11726, 21165, 23676, 30386 Molecule role: O-antigen | |
| Enzyme name: WcqX Group: WbwW UniProt ID: A0A0A8J5Z7 Gene cluster ID: AB812068 | Synthesized dimer: aLQuipN(1-3)aDGlcpN Status: predicted in silico
Confirmation methods: in silico ID: 2959 | Organism (ID 6943): Escherichia coli O163 Full structure (ID 11971): CSDB ID(s): 1905, 3911, 11835 Molecule role: O-antigen | Perepelov et al. 2015e DOI: 10.1016/j.carres.2014.11.006 |
| Enzyme name: WcqW UniProt ID: A0A0A8J902 Gene name: wbyC Gene cluster ID: AB812068 | Synthesized dimer: bDGlcpA(1-3)aLQuipN Status: predicted in silico
Confirmation methods: in silico ID: 2960 | Organism (ID 6943): Escherichia coli O163 Full structure (ID 11971): CSDB ID(s): 1905, 3911, 11835 Molecule role: O-antigen | |
| Enzyme name: WcqV UniProt ID: A0A0A8J5Z3 Gene cluster ID: AB812068 | Synthesized dimer: bDManp(1-4)bDGlcpA Status: predicted in silico
Confirmation methods: in silico ID: 2961 | Organism (ID 6943): Escherichia coli O163 Full structure (ID 11971): CSDB ID(s): 1905, 3911, 11835 Molecule role: O-antigen | |
| Enzyme name: Orf6 Group: WbwW UniProt ID: A0A0A8J7M0 Gene cluster ID: AB812078 | Synthesized dimer: aLQuipN(1-3)bDGlcpN Status: predicted in silico
Confirmation methods: in silico ID: 2962 | Organism (ID 2922): Escherichia coli O181 Full structure (ID 13835): CSDB ID(s): 1923, 12188, 30920 Molecule role: O-antigen | Iguchi et al. 2015 DOI: 10.1093/dnares/dsu043 |
| Enzyme name: Orf2 UniProt ID: A0A0A8J7P6 Gene name: cps12A Gene cluster ID: AB812078 | Synthesized dimer: P(?-4)aLQuipN Status: predicted in silico
Confirmation methods: in silico ID: 2963 | Organism (ID 2922): Escherichia coli O181 Full structure (ID 13835): CSDB ID(s): 1923, 12188, 30920 Molecule role: O-antigen | |
| Enzyme name: Orf1 UniProt ID: A0A0A8J7L7 Gene name: tagE Gene cluster ID: AB812078 | Synthesized dimer: aDGalpN(1-6)aDGlcp Status: predicted in silico
Confirmation methods: in silico ID: 2964 | Organism (ID 2922): Escherichia coli O181 Full structure (ID 13835): CSDB ID(s): 1923, 12188, 30920 Molecule role: O-antigen | |
| Enzyme name: Orf10 UniProt ID: A0A0A8J731 Gene cluster ID: AB812078 | Synthesized dimer: aLQuipN(1-3)aDGalpN Status: predicted in silico
Confirmation methods: in silico ID: 2965 | Organism (ID 2922): Escherichia coli O181 Full structure (ID 13835): CSDB ID(s): 1923, 12188, 30920 Molecule role: O-antigen | |
| Enzyme name: WbwH Group: WbwW UniProt ID: A0A0A8J7V4 Gene cluster ID: AB972419 | Synthesized dimer: aLQuipN(1-3)aDGlcpN Status: predicted in silico
Confirmation methods: in silico ID: 2966 | Organism (ID 7184): Escherichia coli O186 Full structure (ID 12407): CSDB ID(s): 1933, 11728 Molecule role: O-antigen | |
| Enzyme name: Orf11 UniProt ID: A3E2E4 CAZy family: GT4 Gene name: wfbF Gene cluster ID: AB812082 | Synthesized dimer: aDGlcp(1-3)aLQuipN Status: predicted in silico
Confirmation methods: in silico ID: 2967 | Organism (ID 7184): Escherichia coli O186 Full structure (ID 12407): CSDB ID(s): 1933, 11728 Molecule role: O-antigen | |
| Enzyme name: WfbE UniProt ID: A3E2C6 CAZy family: GT2 Gene name: wfbE Gene cluster ID: AB972419 | Synthesized dimer: bDQuip4N(1-6)aDGlcp Status: predicted in silico
Confirmation methods: in silico ID: 2968 | Organism (ID 7184): Escherichia coli O186 Full structure (ID 12407): CSDB ID(s): 1933, 11728 Molecule role: O-antigen | |
| Enzyme name: WbuB Group: WbuB UniProt ID: Q5GFM0 CAZy family: GT4 Gene name: wbuB Gene cluster ID: AY568960 | Synthesized dimer: aLFucpN(1-3)bDGlcpN Status: predicted in silico
Confirmation methods: in silico ID: 2969 | Organism (ID 2398): Escherichia coli O4 Full structure (ID 4069): CSDB ID(s): 1503, 20636, 22488, 108693, 114297, 117388 Molecule role: O-antigen | D'Souza et al. 2005 DOI: 10.1016/j.femsle.2005.01.012 |
| Enzyme name: WbuH Group: WbuH UniProt ID: Q5GFM4 CAZy family: GT4 Gene name: wbuH Gene cluster ID: AY568960 | Synthesized dimer: aDGlcp(1-3)aLFucpN Status: predicted in silico
Confirmation methods: in silico ID: 2970 | Organism (ID 2398): Escherichia coli O4 Full structure (ID 4069): CSDB ID(s): 1503, 20636, 22488, 108693, 114297, 117388 Molecule role: O-antigen | |
| Enzyme name: WbuG UniProt ID: Q5GFM6 CAZy family: GT2 Gene name: wbuG Gene cluster ID: AY568960 | Synthesized dimer: aLRhap(1-6)aDGlcp Status: predicted in silico
Confirmation methods: in silico ID: 2971 | Organism (ID 2398): Escherichia coli O4 Full structure (ID 4069): CSDB ID(s): 1503, 20636, 22488, 108693, 114297, 117388 Molecule role: O-antigen | |
| Enzyme name: WbuB Group: WbuB UniProt ID: A0A0B1C699 Gene name: wbuB Gene cluster ID: AB811600 | Synthesized dimer: aLFucpN(1-3)bDGlcpN Status: predicted in silico
Confirmation methods: in silico ID: 2972 | Organism (ID 8173): Escherichia coli O12 Full structure (ID 12259): CSDB ID(s): 1514, 3833 Molecule role: O-antigen | Iguchi et al. 2015 DOI: 10.1093/dnares/dsu043 |
| Enzyme name: Orf4 UniProt ID: A0A0B1C8U7 Gene name: mshA Gene cluster ID: AB811600 | Synthesized dimer: aDGlcpN(1-3)aLFucpN Status: predicted in silico
Confirmation methods: in silico ID: 2973 | Organism (ID 8173): Escherichia coli O12 Full structure (ID 12259): CSDB ID(s): 1514, 3833 Molecule role: O-antigen | |
| Enzyme name: Orf1 UniProt ID: A0A0A8J3M8 Gene name: epsH Gene cluster ID: AB811600 | Synthesized dimer: bDGlcp(1-6)aDGlcpN Status: predicted in silico
Confirmation methods: in silico ID: 2974 | Organism (ID 8173): Escherichia coli O12 Full structure (ID 12259): CSDB ID(s): 1514, 3833 Molecule role: O-antigen | |
| Enzyme name: WbuB Group: WbuB UniProt ID: Q5EXL1 CAZy family: GT4 Gene name: wbuB Gene cluster ID: AY647261 | Synthesized dimer: aLFucpN(1-3)bDGlcpN Status: predicted in silico
Confirmation methods: in silico ID: 2975 | Organism (ID 5359): Escherichia coli O15 Full structure (ID 2267): CSDB ID(s): 1305, 1516, 3377, 11975, 27490, 108595 Molecule role: O-antigen | Beutin et al. 2005a DOI: 10.1128/JCM.43.2.703-710.2005 |
| Enzyme name: WbuS UniProt ID: Q5EXL6 CAZy family: GT2 Gene name: wbuS Gene cluster ID: AY647261 | Synthesized dimer: bDGalp(1-3)aLFucpN Status: predicted in silico
Confirmation methods: in silico ID: 2976 | Organism (ID 5359): Escherichia coli O15 Full structure (ID 2267): CSDB ID(s): 1305, 1516, 3377, 11975, 27490, 108595 Molecule role: O-antigen | |
| Enzyme name: WbuB Group: WbuB UniProt ID: D7P6D2 CAZy family: GT4 Gene name: wbuB Gene cluster ID: GU014554 | Synthesized dimer: aLFucpN(1-3)bDGlcpN Status: predicted in silico
Confirmation methods: in silico ID: 2977 | Organism (ID 6827): Escherichia coli O25a Full structure (ID 2184): CSDB ID(s): 816, 1533, 10889, 12694, 12942, 20652, 29319, 108690, 113962 Molecule role: O-antigen | Wang et al. 2010b DOI: 10.1128/JCM.02014-09 |
| Enzyme name: WekC Group: WbuH UniProt ID: D7P6C8 CAZy family: GT4 Gene name: wbuH Gene cluster ID: GU014554 | Synthesized dimer: aDGlcp(1-3)aLFucpN Status: predicted in silico
Confirmation methods: in silico ID: 2978 | Organism (ID 6827): Escherichia coli O25a Full structure (ID 2184): CSDB ID(s): 816, 1533, 10889, 12694, 12942, 20652, 29319, 108690, 113962 Molecule role: O-antigen | |
| Enzyme name: WekB UniProt ID: D7P6C6 CAZy family: GT4 Gene name: wekB Gene cluster ID: GU014554 | Synthesized dimer: bDGlcp(1-6)aDGlcp Status: predicted in silico
Confirmation methods: in silico ID: 2979 | Organism (ID 6827): Escherichia coli O25a Full structure (ID 2184): CSDB ID(s): 816, 1533, 10889, 12694, 12942, 20652, 29319, 108690, 113962 Molecule role: O-antigen | |
| Enzyme name: WekA UniProt ID: D7P6C5 CAZy family: GT2 Gene name: wekA Gene cluster ID: GU014554 | Synthesized dimer: aLRhap(1-3)aDGlcp Status: predicted in silico
Confirmation methods: in silico ID: 2980 | Organism (ID 6827): Escherichia coli O25a Full structure (ID 2184): CSDB ID(s): 816, 1533, 10889, 12694, 12942, 20652, 29319, 108690, 113962 Molecule role: O-antigen | |
| Enzyme name: WbuB Group: WbuB UniProt ID: Q8GNF0 CAZy family: GT4 Gene name: wbuB Gene cluster ID: AF529080 | Synthesized dimer: aLFucpN(1-3)bDGlcpN Status: predicted in silico
Confirmation methods: in silico ID: 2981 | Organism (ID 2397): Escherichia coli O26 Full structure (ID 2745): CSDB ID(s): 1534, 3199, 10023, 12675, 20653 Molecule role: O-antigen | D'Souza et al. 2002 DOI: 10.1016/S0378-1119(02)00876-4 |
| Enzyme name: WbuA UniProt ID: Q8GNF4 CAZy family: GT2 Gene name: wbuA Gene cluster ID: AF529080 | Synthesized dimer: aLRhap(1-4)aLFucpN Status: predicted in silico
Confirmation methods: in silico ID: 2982 | Organism (ID 2397): Escherichia coli O26 Full structure (ID 2745): CSDB ID(s): 1534, 3199, 10023, 12675, 20653 Molecule role: O-antigen | |
| Enzyme name: WbuB Group: WbuB UniProt ID: B5L3I7 CAZy family: GT4 Gene name: wbuB Gene cluster ID: EU294173 | Synthesized dimer: aLFucpN(1-3)bDGlcpN Status: predicted in silico
Confirmation methods: in silico ID: 2983 | Organism (ID 4031): Escherichia coli O29 Full structure (ID 6977): CSDB ID(s): 1538, 11595, 11802, 20208, 23077, 30874 Molecule role: O-antigen | Liu et al. 2008 DOI: 10.1111/j.1574-6976.2008.00114.x |
| Enzyme name: WfgA Group: WfgA UniProt ID: B5L3I3 CAZy family: GT4 Gene name: wfgA Gene cluster ID: EU294173 | Synthesized dimer: aDGalp(1-3)aLFucpN Status: predicted in silico
Confirmation methods: in silico ID: 2984 | Organism (ID 4031): Escherichia coli O29 Full structure (ID 6977): CSDB ID(s): 1538, 11595, 11802, 20208, 23077, 30874 Molecule role: O-antigen | |
| Enzyme name: WffY UniProt ID: B5L3H9 CAZy family: GT4 Gene name: wffY Gene cluster ID: EU294173 | Synthesized dimer: aDGlcp(1-6)aDGalp Status: predicted in silico
Confirmation methods: in silico ID: 2985 | Organism (ID 4031): Escherichia coli O29 Full structure (ID 6977): CSDB ID(s): 1538, 11595, 11802, 20208, 23077, 30874 Molecule role: O-antigen | |
| Enzyme name: WffZ UniProt ID: B5L3I0 CAZy family: GT4 Gene name: wffZ Gene cluster ID: EU294173 | Synthesized dimer: bDGlcp(1-4)aLFucpN Status: predicted in silico
Confirmation methods: in silico ID: 2986 | Organism (ID 4031): Escherichia coli O29 Full structure (ID 6977): CSDB ID(s): 1538, 11595, 11802, 20208, 23077, 30874 Molecule role: O-antigen | |
| Enzyme name: WffX UniProt ID: B5L3H8 Gene name: wffX Gene cluster ID: EU294173 | Synthesized dimer: P(?-6)bDGlcp Status: predicted in silico
Confirmation methods: in silico ID: 2987 | Organism (ID 4031): Escherichia coli O29 Full structure (ID 6977): CSDB ID(s): 1538, 11595, 11802, 20208, 23077, 30874 Molecule role: O-antigen | |
| Enzyme name: WbuB Group: WbuB UniProt ID: A0A0A8J5N5 Gene cluster ID: AB812048 | Synthesized dimer: aLFucpN(1-3)aDGlcpN Status: predicted in silico
Confirmation methods: in silico ID: 2988 | Organism (ID 4662): Escherichia coli O108 Full structure (ID 9152): CSDB ID(s): 1415, 1847, 3389, 26823 Molecule role: O-antigen | Perepelov et al. 2010 |
| Enzyme name: Orf13 Group: WfgA UniProt ID: A0A0A8J690 Gene cluster ID: AB812048 | Synthesized dimer: aDGalp(1-3)aLFucpN Status: predicted in silico
Confirmation methods: in silico ID: 2989 | Organism (ID 4662): Escherichia coli O108 Full structure (ID 9152): CSDB ID(s): 1415, 1847, 3389, 26823 Molecule role: O-antigen | |
| Enzyme name: Orf10 UniProt ID: A0A0A8J542 Gene name: RS085386_03744,ERS139266_00602 Gene cluster ID: AB812048 | Synthesized dimer: a8eLegp(2-6)aDGalp Status: predicted in silico
Confirmation methods: in silico ID: 2990 | Organism (ID 4662): Escherichia coli O108 Full structure (ID 9152): CSDB ID(s): 1415, 1847, 3389, 26823 Molecule role: O-antigen | |
| Enzyme name: WbuB Group: WbuB UniProt ID: Q6JAA6 CAZy family: GT4 Gene cluster ID: AY545992 | Synthesized dimer: aLFucpN(1-3)aDGlcpN Status: predicted in silico
Confirmation methods: in silico ID: 2991 | Organism (ID 949): Escherichia coli O172 Full structure (ID 1505): CSDB ID(s): 1914, 3112, 20708, 21747, 21772 Molecule role: O-antigen | Guo et al. 2004 DOI: 10.1111/j.1365-2672.2004.02305.x |
| Enzyme name: Orf5 UniProt ID: Q6JAB0 CAZy family: GT4 Gene cluster ID: AY545992 | Synthesized dimer: aDGlcp(1-3)aLFucpN Status: predicted in silico
Confirmation methods: in silico ID: 2992 | Organism (ID 949): Escherichia coli O172 Full structure (ID 1505): CSDB ID(s): 1914, 3112, 20708, 21747, 21772 Molecule role: O-antigen | |
| Enzyme name: Orf4 UniProt ID: Q6JAB1 Gene cluster ID: AY545992 | Synthesized dimer: P(?-4)aDGlcp Status: predicted in silico
Confirmation methods: in silico ID: 2993 | Organism (ID 949): Escherichia coli O172 Full structure (ID 1505): CSDB ID(s): 1914, 3112, 20708, 21747, 21772 Molecule role: O-antigen | |
| Enzyme name: Orf3 UniProt ID: Q6JAB2 CAZy family: GT25 Gene cluster ID: AY545992 | Synthesized dimer: aLFucpN(1-4)aDGlcp Status: predicted in silico
Confirmation methods: in silico ID: 2994 | Organism (ID 949): Escherichia coli O172 Full structure (ID 1505): CSDB ID(s): 1914, 3112, 20708, 21747, 21772 Molecule role: O-antigen | |
| Enzyme name: WbuB Group: WbuB UniProt ID: Q3IA78 CAZy family: GT4 Gene name: wbuB Gene cluster ID: DQ008593 | Synthesized dimer: aLFucpN(1-3)bDGlcpN Status: predicted in silico
Confirmation methods: in silico ID: 2995 | Organism (ID 5417): Escherichia coli O177 Full structure (ID 9865): CSDB ID(s): 1919, 11313, 27116 Molecule role: O-antigen | Beutin et al. 2005b DOI: 10.1128/JCM.43.10.5143-5149.2005 |
| Enzyme name: WbdZ UniProt ID: Q3IA82 CAZy family: GT4 Gene name: wbdZ Gene cluster ID: DQ008593 | Synthesized dimer: aLFucpN(1-3)aLFucpN Status: predicted in silico
Confirmation methods: in silico ID: 2996 | Organism (ID 5417): Escherichia coli O177 Full structure (ID 9865): CSDB ID(s): 1919, 11313, 27116 Molecule role: O-antigen | |
| Enzyme name: WbdY UniProt ID: Q3IA83 CAZy family: GT2 Gene name: wbdY Gene cluster ID: DQ008593 | Synthesized dimer: aLRhap(1-3)aLFucpN Status: predicted in silico
Confirmation methods: in silico ID: 2997 | Organism (ID 5417): Escherichia coli O177 Full structure (ID 9865): CSDB ID(s): 1919, 11313, 27116 Molecule role: O-antigen | |
| Enzyme name: WbuB Group: WbuB UniProt ID: Q5ISY1 CAZy family: GT4 Gene name: wbuB Gene cluster ID: AY647260 | Synthesized dimer: aLFucpN(1-3)bDGlcpN Status: predicted in silico
Confirmation methods: in silico ID: 2998 | Organism (ID 2402): Escherichia coli O145 Full structure (ID 4075): CSDB ID(s): 1886, 21185, 25749, 26811, 30373 Molecule role: O-antigen | Feng et al. 2005b DOI: 10.1128/JB.187.2.758-764.2005 |
| Enzyme name: WbuW UniProt ID: Q5ISX4 Gene name: wbuW Gene cluster ID: AY647260 | Synthesized dimer: aNeup(2-3)aLFucpN Status: predicted in silico
Confirmation methods: in silico ID: 2999 | Organism (ID 2402): Escherichia coli O145 Full structure (ID 4075): CSDB ID(s): 1886, 21185, 25749, 26811, 30373 Molecule role: O-antigen | |
| Enzyme name: PBP1A UniProt ID: O66874 CAZy family: GT51 Gene name: mrcA Gene GenBank ID: 1193936 | Synthesized dimer: bDGlcpN(1-4)bMurp Donor (ID 36523): Ac(1-2)bDGlcpN(1-4)[xDAla?(2-1)xDAla?(2-1)xLLys(2-5)xDGlu(2-1)xLAla?(2-8)]aXMurp(1-P-P-1)Subst // Subst = 3,7,11,15,19,23,27-heptamethyl-octacosa-2Z,6Z,10Z,14Z,18E,22E,26-heptaen-1-ol Acceptor (ID 36523): Ac(1-2)bDGlcpN(1-4)[xDAla?(2-1)xDAla?(2-1)xLLys(2-5)xDGlu(2-1)xLAla?(2-8)]aXMurp(1-P-P-1)Subst // Subst = 3,7,11,15,19,23,27-heptamethyl-octacosa-2Z,6Z,10Z,14Z,18E,22E,26-heptaen-1-ol Status: evidence in vitro
Confirmation methods: in vitro (purified protein), mutation (in recombinant protein) ID: 3000 Notes: The PGT domain of PBP1A was used. N of murein units varied from 2 to >20. | Organism (ID 17058): Aquifex aeolicus Full structure (ID 36524): | Barrett et al. 2007 DOI: 10.1074/jbc.M705440200 |
| Synthesized dimer: bDGlcpN(1-4)bMurp Donor (ID 36525): Ac(1-2)bDGlcpN(1-4)[xDAla?(2-1)xDAla?(2-1)xLLys(2-5)xDGlu(2-1)xLAla?(2-8)]bXMurp(1-4)[Ac(1-2)]bDGlcpN(1-4)[xDAla?(2-1)xDAla?(2-1)xLLys(2-5)xDGlu(2-1)xLAla?(2-8)]aXMurp(1-P-P-1)Subst // Subst = 3,7,11,15,19,23,27-heptamethyl-octacosa-2Z,6Z,10Z,14Z,18E,22E,26-heptaen-1-ol Acceptor (ID 36525): Ac(1-2)bDGlcpN(1-4)[xDAla?(2-1)xDAla?(2-1)xLLys(2-5)xDGlu(2-1)xLAla?(2-8)]bXMurp(1-4)[Ac(1-2)]bDGlcpN(1-4)[xDAla?(2-1)xDAla?(2-1)xLLys(2-5)xDGlu(2-1)xLAla?(2-8)]aXMurp(1-P-P-1)Subst // Subst = 3,7,11,15,19,23,27-heptamethyl-octacosa-2Z,6Z,10Z,14Z,18E,22E,26-heptaen-1-ol Status: evidence in vitro
Confirmation methods: in vitro (purified protein) ID: 3001 Notes: The PGT domain of PBP1A was used. N of murein units was 4, 6, and 8; short products accumulated before longer products appeared. | Organism (ID 17058): Aquifex aeolicus Full structure (ID 36526): | ||
| Synthesized dimer: bDGlcpN(1-4)bMurp Donor (ID 36527): Ac(1-2)bDGlcpN(1-4)[xDAla?(2-1)xDAla?(2-1)xLLys(2-5)xDGlu(2-1)xLAla?(2-8)]aXMurp(1-P-P-1)Subst // Subst = 3,7,11,15,19,23,27,31,35,39,43-undecamethyl-tetratetraconta-2Z,6Z,10Z,14Z,18Z,22Z,26Z,30Z,34E,38E,42-undecaen-1-ol Acceptor (ID 36528): b?Galp(1-4)[Ac(1-2)]bDGlcpN(1-4)[xDAla?(2-1)xDAla?(2-1)xLLys(2-5)xDGlu(2-1)xLAla?(2-8)]aXMurp(1-P-P-1)Subst // Subst = 3,7,11,15,19,23,27,31,35,39,43-undecamethyl-tetratetraconta-2Z,6Z,10Z,14Z,18Z,22Z,26Z,30Z,34E,38E,42-undecaen-1-ol Status: evidence in vitro
Confirmation methods: in vitro (purified protein) ID: 3002 Notes: N of murein units varied from 3 to higher. The study was aimed at revealing the direction of chain elongation. | Organism (ID 17058): Aquifex aeolicus Full structure (ID 36529): | Perlstein et al. 2007 DOI: 10.1021/ja075965y | |
| Enzyme name: PBP2 UniProt ID: Q9R744 CAZy family: GT51 | Synthesized dimer: bDGlcpN(1-4)bMurp Donor (ID 36527): Ac(1-2)bDGlcpN(1-4)[xDAla?(2-1)xDAla?(2-1)xLLys(2-5)xDGlu(2-1)xLAla?(2-8)]aXMurp(1-P-P-1)Subst // Subst = 3,7,11,15,19,23,27,31,35,39,43-undecamethyl-tetratetraconta-2Z,6Z,10Z,14Z,18Z,22Z,26Z,30Z,34E,38E,42-undecaen-1-ol Acceptor (ID 36528): b?Galp(1-4)[Ac(1-2)]bDGlcpN(1-4)[xDAla?(2-1)xDAla?(2-1)xLLys(2-5)xDGlu(2-1)xLAla?(2-8)]aXMurp(1-P-P-1)Subst // Subst = 3,7,11,15,19,23,27,31,35,39,43-undecamethyl-tetratetraconta-2Z,6Z,10Z,14Z,18Z,22Z,26Z,30Z,34E,38E,42-undecaen-1-ol Status: evidence in vitro
Confirmation methods: in vitro (purified protein) ID: 3003 Notes: N of murein units varied from 3 to higher. The study was aimed at revealing the direction of chain elongation. | Organism (ID 974): Staphylococcus aureus Full structure (ID 36529): | |
| Synthesized dimer: bDGlcpN(1-4)bMurp Donor (ID 36523): Ac(1-2)bDGlcpN(1-4)[xDAla?(2-1)xDAla?(2-1)xLLys(2-5)xDGlu(2-1)xLAla?(2-8)]aXMurp(1-P-P-1)Subst // Subst = 3,7,11,15,19,23,27-heptamethyl-octacosa-2Z,6Z,10Z,14Z,18E,22E,26-heptaen-1-ol Acceptor (ID 36523): Ac(1-2)bDGlcpN(1-4)[xDAla?(2-1)xDAla?(2-1)xLLys(2-5)xDGlu(2-1)xLAla?(2-8)]aXMurp(1-P-P-1)Subst // Subst = 3,7,11,15,19,23,27-heptamethyl-octacosa-2Z,6Z,10Z,14Z,18E,22E,26-heptaen-1-ol Status: evidence in vitro
Confirmation methods: in vitro (purified protein) ID: 3004 Notes: Lipid II is utilized as donor/substrate. Lipid II derivatives may vary. The limiting length was about 15 units (Lipid 30). | Organism (ID 974): Staphylococcus aureus Full structure (ID 36524): | Wang et al. 2008 DOI: 10.1021/ja806016y Barrett et al. 2005 DOI: 10.1128/JB.187.6.2215-2217.2005 | |
| Enzyme name: PBP2A UniProt ID: X5NX71 | Synthesized dimer: bDGlcpN(1-4)bMurp Donor (ID 36523): Ac(1-2)bDGlcpN(1-4)[xDAla?(2-1)xDAla?(2-1)xLLys(2-5)xDGlu(2-1)xLAla?(2-8)]aXMurp(1-P-P-1)Subst // Subst = 3,7,11,15,19,23,27-heptamethyl-octacosa-2Z,6Z,10Z,14Z,18E,22E,26-heptaen-1-ol Acceptor (ID 36523): Ac(1-2)bDGlcpN(1-4)[xDAla?(2-1)xDAla?(2-1)xLLys(2-5)xDGlu(2-1)xLAla?(2-8)]aXMurp(1-P-P-1)Subst // Subst = 3,7,11,15,19,23,27-heptamethyl-octacosa-2Z,6Z,10Z,14Z,18E,22E,26-heptaen-1-ol Status: evidence in vitro
Confirmation methods: in vitro (purified truncated protein) ID: 3005 | Organism (ID 449): Enterococcus faecalis Full structure (ID 36524): | Wang et al. 2008 DOI: 10.1021/ja806016y |
| Enzyme name: WbbP/RfbP UniProt ID: Q53452* CAZy family: GT2; GT4 Gene name: wbbP / rfpB Gene GenBank ID: 4991499* | Synthesized dimer: aDGalp(1-3)aDGlcpN Status: indirect evidence in vivo
Confirmation methods: overexpression in E.coli ID: 3006 | Organism (ID 17059): Shigella dysenteriae type 1 LSPQ3472 Expressed in: E. coli Full structure (ID 13828): CSDB ID(s): 1053, 1936, 2158, 3227, 3712, 3783, 3987, 6263, 6843, 7715, 8821, 11271, 11573, 12633, 12722, 13012, 20113, 21474, 22042, 22417, 22420, 23061, 23491, 28479, 28573, 28591, 30173, 108636, 117259, 117282, 122424, 124115, 130504, 148802 | Feng et al. 2007 DOI: 10.1099/mic.0.2006/001107-0 |
| Enzyme name: AAHCR UniProt ID: D2TV87* | Synthesized dimer: HEP(1-3)Ser Status: indirect evidence in vivo
Confirmation methods: mutation (deletion), overexpression ID: 3007 Notes: AAH is a putative glycosyltransferase for AIDA. | Organism (ID 17060): Citrobacter rodentium DBS100 Exact full structure is unknown | Charbonneau et al. 2012 DOI: 10.1111/j.1365-2958.2012.07973.x |
| Synthesized dimer: HEP(1-3)Thr Status: indirect evidence in vivo
Confirmation methods: mutation (deletion), overexpression ID: 3008 Notes: AAH is a putative glycosyltransferase for AIDA. | Organism (ID 17060): Citrobacter rodentium DBS100 Exact full structure is unknown | ||
| Enzyme name: PmHS2 UniProt ID: Q5SGE1* CAZy family: GT2; GT45 | Synthesized dimer: aDGlcpN(1-4)bDGlcpA Donor (ID 35041): Ac(1-2)aDGlcpN(1-P-P-5)xXnucU Acceptor (ID 35842): bDGlcpA(1-1)Subst // Subst = SMILES O=C(CCC(NCC{1}CO)=O)NC1=CC=CC=C1C(OC)=O Status: evidence in vitro
Confirmation methods: in vitro(purified protein) ID: 3009 Notes: PmHS2 can use uridine 5'-diphosphate-N-acetylglucosamine (UDP-GlcNAc) and some of its C2'- and C6'-derivatives as donor substrates. | Organism (ID 17061): Pasteurella multocida K5 Full structure (ID 35843): | Li et al. 2014 DOI: 10.1007/s00253-013-4947-1 |
| Enzyme name: IroB UniProt ID: A0A0F6B5H0* Gene name: iroB Gene GenBank ID: 1254296* | Synthesized dimer: bD1dGlcp(1C-5)2,3HOBz Status: indirect evidence in vivo
Confirmation methods: mutation ID: 3010 Notes: Dual mutations in IroB and IroC were tested. IroB presumably participates in the synthesis of salmochelin 1. | Organism (ID 17062): Salmonella enterica Typhimurium ATCC14028 Full structure (ID 36530): | Hantke et al. 2003 DOI: 10.1073 pnas.0737682100 Mueller et al. 2009 DOI: 10.1007/s10534-009-9217-4 |
| Synthesized dimer: bD1dGlcp(1C-5)2,3HOBz Status: indirect evidence in vivo
Confirmation methods: mutation ID: 3011 Notes: Dual mutations in IroB and IroC were tested. IroB presumably participates in the synthesis of salmochelin 2. | Organism (ID 17062): Salmonella enterica Typhimurium ATCC14028 Full structure (ID 36531): | ||
| Enzyme name: WbaP UniProt ID: P26406* | Synthesized dimer: P(?-?)P Donor (ID 35273): ?DGalp(1-P-P-5)xXnucU Acceptor (ID 35735): P-1)Subst // Subst = undecaprenol Status: evidence in vitro
Confirmation methods: in vitro (membrane fraction) ID: 3012 | Organism (ID 531): Salmonella enterica Typhimurium Full structure (ID 36532): | Patel et al. 2012 DOI: 10.1128/JB.06052-11 |
| Enzyme name: ArnT UniProt ID: A0A0F6B438* | Synthesized dimer: P(?-1)aLArap4N Donor (ID 36533): aLArap4N(1-P-1)Subst // Subst = undecaprenol Acceptor (ID 36534): lR3HOMyr(1-2)[lR3HOMyr(1-2)[P-4),lR3HOMyr(1-3)]bDGlcpN(1-6),lR3HOMyr(1-3)]aDGlcpN(1-P Status: evidence in vitro
Confirmation methods: in vitro (membrane fraction) ID: 3013 Notes: Lipid IVA was used as acceptor. ArnT possibly can incorporate two L-Ara4N units. | Organism (ID 9393): Salmonella typhimurium 14028 Full structure (ID 36535): | Trent et al. 2001 DOI: 10.1074/jbc.M106961200 |
| Synthesized dimer: P(?-1)aLArap4N Donor (ID 36533): aLArap4N(1-P-1)Subst // Subst = undecaprenol Acceptor (ID 36536): lXPam(1-3)lR3HOMyr(1-2)[lR3HOMyr(1-2)[P-4),lR3HOMyr(1-3)]bDGlcpN(1-6),lR3HOMyr(1-3)]aDGlcpN(1-P Status: evidence in vitro
Confirmation methods: in vitro (membrane fraction) ID: 3014 Notes: Lipid IVB was used as acceptor. ArnT possibly can incorporate two L-Ara4N units. | Organism (ID 9393): Salmonella typhimurium 14028 Full structure (ID 36537): | ||
| Synthesized dimer: P(?-1)aLArap4N Donor (ID 36533): aLArap4N(1-P-1)Subst // Subst = undecaprenol Acceptor (ID 36538): lR3HOMyr(1-2)[lR3HOMyr(1-2)[aXKdo(2-4)aXKdo(2-6),P-4),lR3HOMyr(1-3)]bDGlcpN(1-6),lR3HOMyr(1-3)]aDGlcpN(1-P Status: evidence in vitro
Confirmation methods: in vitro (membrane fraction) ID: 3015 Notes: Lipid IVA was used as acceptor. ArnT possibly can incorporate two L-Ara4N units. | Organism (ID 9393): Salmonella typhimurium 14028 Full structure (ID 36539): | ||
| Enzyme name: PssY UniProt ID: Q9ABR0* Gene name: pssY Gene GenBank ID: 944218* | Synthesized dimer: P(?-?)P Donor (ID 34839): ?DGlcp(1-P-P-5)xXnucU Acceptor (ID 35735): P-1)Subst // Subst = undecaprenol Status: evidence in vitro
Confirmation methods: in vitro (membrane fraction) ID: 3016 | Organism (ID 6219): Caulobacter crescentus Full structure (ID 35802): | Patel et al. 2012 DOI: 10.1128/JB.06052-11 |
| Enzyme name: PglC UniProt ID: Q0P9D0* | Synthesized dimer: P(?-?)P Donor (ID 36540): Ac(1-2)[Ac(1-4)]??QuipN4N(1-P-P-5)xXnucU Acceptor (ID 36541): P-1)Subst // Subst = 3,7,11,15,19,23,27,31,35,39,43-undecamethyl-tetratetraconta-2Z,6Z,10Z,14Z,18Z,22Z,26Z,30Z,34E,38E,42-undecaen-1-ol Status: evidence in vitro
Confirmation methods: in vitro (membrane fraction), mutation (in recombinant protein) ID: 3017 | Organism (ID 52): Campylobacter jejuni Full structure (ID 36542): | Lukose et al. 2016 DOI: 10.1021/acs.biochem.5b01086 |
| Enzyme name: BcGT1 UniProt ID: Q739H3 CAZy family: GT1 Gene GenBank ID: AAS41089.1 | Synthesized dimer: bDGlcp(1-3)Quercetin Donor (ID 34839): ?DGlcp(1-P-P-5)xXnucU Acceptor (ID 34846): xXQuercetin Status: evidence in vitro
Confirmation methods: expression in E.coli (as whole-cell biocatalyst) ID: 3018 | Organism (ID 1267): Bacillus subtilis Expressed in: E. coli Full structure (ID 19231): CSDB ID(s): 44612, 46693, 47475, 48669, 48941, 60081, 60203, 60273, 60908, 61152, 61413, 61821, 62231, 63006, 63205, 63329, 63829, 64121, 64673, 64772, 64781, 64887, 64953, 65376, 65396, 65565, 65724, 65828, 65928, 65944, 65954, 65977, 65989, 66185, 66208, 66350, 66379, 66413, 66519, 66554, 66580, 66938, 66944, 67032, 67190, 67294, 67570, 67580, 67607, 67635, 67646, 67720, 67766, 67864, 67926, 67995, 68004, 68170, 68616, 68651, 68741, 68865, 120586, 131302, 139116, 146361, 146591, 146662, 146676, 146799, 270704, 270775 | An et al. 2016 DOI: 10.1007/s10295-016-1750-x |
| Enzyme name: DGS UniProt ID: Q8KQL6 CAZy family: GT4 | Synthesized dimer: aDGlcp(1-2)aDGlcp Donor (ID 34839): ?DGlcp(1-P-P-5)xXnucU Acceptor (ID 36543): aDGlcp(1-1)[LIP(1-3),LIP(1-2)]xDGro Status: evidence in vitro
Confirmation methods: in vitro (crude extract), mutation (in vitro) ID: 3019 | Organism (ID 5529): Acholeplasma laidlawii Full structure (ID 36544): | Ge et al. 2011 DOI: 10.1074/jbc.M110.138495 Wikstroem et al. 2009 DOI: 10.1074/jbc.M804482200 |
| Enzyme name: MGS UniProt ID: Q93P60 CAZy family: GT4 | Synthesized dimer: aDGlcp(1-1)DGro Donor (ID 34839): ?DGlcp(1-P-P-5)xXnucU Acceptor (ID 35274): LIP(1-2)[LIP(1-3)]xDGro Status: evidence in vitro
Confirmation methods: expression in E.coli (as whole-cell biocatalyst) ID: 3020 | Organism (ID 5529): Acholeplasma laidlawii Expressed in: E. coli Exact full structure is unknown | Wikstroem et al. 2009 DOI: 10.1074/jbc.M804482200 |
| Enzyme name: YjiC UniProt ID: Q65JC2 CAZy family: GT1 Gene name: TRNA_RS31140 Gene GenBank ID: 3031168 | Synthesized dimer: bDGlcp(1-4')Subst // Subst = naringenin = SMILES O=C1CC(C2=CC={54}C(O)C=C2)OC3=C{7}C(O)={6}C{5}C(O)=C13 Donor (ID 34898): aDGlcp(1-P-P-5)xXnucU Acceptor (ID 34954): Subst // Subst = naringenin = SMILES O=C1CC(C2=CC={54}C(O)C=C2)OC3=C{7}C(O)={6}C{5}C(O)=C13 Status: evidence in vitro
Confirmation methods: in vitro (purified protein) ID: 3021 | Organism (ID 17063): Bacillus licheniformis DSM 13 Full structure (ID 21847): CSDB ID(s): 50166, 66758 | Thapa et al. 2019 DOI: 10.1007/s00253-019-10060-5 |
| Synthesized dimer: bDGlcp(1-4')Subst // Subst = naringenin = SMILES O=C1CC(C2=CC={54}C(O)C=C2)OC3=C{7}C(O)={6}C{5}C(O)=C13 Donor (ID 34898): aDGlcp(1-P-P-5)xXnucU Acceptor (ID 34954): Subst // Subst = naringenin = SMILES O=C1CC(C2=CC={54}C(O)C=C2)OC3=C{7}C(O)={6}C{5}C(O)=C13 Status: evidence in vitro
Confirmation methods: in vitro (purified protein) ID: 3022 | Organism (ID 17063): Bacillus licheniformis DSM 13 Full structure (ID 36545): | ||
| Synthesized dimer: bDGlcp(1-7)Subst // Subst = naringenin = SMILES O=C1CC(C2=CC={54}C(O)C=C2)OC3=C{7}C(O)={6}C{5}C(O)=C13 Donor (ID 34898): aDGlcp(1-P-P-5)xXnucU Acceptor (ID 34954): Subst // Subst = naringenin = SMILES O=C1CC(C2=CC={54}C(O)C=C2)OC3=C{7}C(O)={6}C{5}C(O)=C13 Status: evidence in vitro
Confirmation methods: in vitro (purified protein) ID: 3023 | Organism (ID 17063): Bacillus licheniformis DSM 13 Full structure (ID 20975): CSDB ID(s): 48906, 49689, 50366, 65441, 66757, 66859 | ||
| Synthesized dimer: bDGlcp(1-4')Subst // Subst = naringenin = SMILES O=C1CC(C2=CC={54}C(O)C=C2)OC3=C{7}C(O)={6}C{5}C(O)=C13 Donor (ID 34898): aDGlcp(1-P-P-5)xXnucU Acceptor (ID 34954): Subst // Subst = naringenin = SMILES O=C1CC(C2=CC={54}C(O)C=C2)OC3=C{7}C(O)={6}C{5}C(O)=C13 Status: evidence in vitro
Confirmation methods: in vitro (purified protein) ID: 3024 | Organism (ID 17063): Bacillus licheniformis DSM 13 Full structure (ID 36545): | ||
| Enzyme name: KpsC Enzyme GenBank ID: OAQ19866.1 | Synthesized dimer: bKdo(2-4)bKdo Donor (ID 35874): bXKdo(2-P-5)xXnucC Acceptor (ID 35877): bXKdo(2-7)bXKdo(2-1')Subst // Subst = 8-aminooctyl-BODIPY conjugate = SMILES CC1=C2C=C3C=CC(CCC(NCCCCCCCC{51}O)=O)=[N+]3[B-](F)(F)N2C(C)=C1 Status: evidence in vitro
Confirmation methods: in vitro (purified protein); in vitro (deletion) ID: 3025 Notes: The T. dismutans KpsC enzyme possesses two GT active sites. The N-terminal GT (KpsC-NEc) is a β-(2→4)-Kdo transferase, whereas the C-terminal GT (KpsC-CEc) transfers β-(2→7)-linked Kdo residues12, creating the alternating linkages seen in the natural product. | Organism (ID 17064): Thermosulfurimonas dismutans Full structure (ID 35878): | Doyle et al. 2019 DOI: 10.1038/s41589-019-0276-8 |
| Synthesized dimer: bKdo(2-7)bKdo Donor (ID 35874): bXKdo(2-P-5)xXnucC Acceptor (ID 35879): bXKdo(2-4)bXKdo(2-7)bXKdo(2-1')Subst // Subst = 8-aminooctyl-BODIPY conjugate = SMILES CC1=C2C=C3C=CC(CCC(NCCCCCCCC{51}O)=O)=[N+]3[B-](F)(F)N2C(C)=C1 Status: evidence in vitro
Confirmation methods: in vitro (purified protein); in vitro (deletion) ID: 3026 Notes: The T. dismutans KpsC enzyme possesses two GT active sites. The N-terminal GT (KpsC-NEc) is a β-(2→4)-Kdo transferase, whereas the C-terminal GT (KpsC-CEc) transfers β-(2→7)-linked Kdo residues12, creating the alternating linkages seen in the natural product. | Organism (ID 17064): Thermosulfurimonas dismutans Full structure (ID 35880): | ||
| Enzyme name: WzyK84 Enzyme GenBank ID: AHB32411.1 Gene name: wzy | Synthesized dimer: aDGlcpN(1-2)aLRhap Donor (ID 35226): Ac(1-2)?DGlcpN(1-P-P-5)xXnucU Acceptor (ID 36196): -2)[Ac(1-2)aDManpN(1-3)]aLRhap(1-2)aLRhap(1-3)aLRhap(1-3)[Ac(1-2)]aDGlcpN(1- Status: predicted in silico
Confirmation methods: Sequencing (gene, protein) ID: 3500 Notes: gene cluster name: PSgc10, KL84; name was augmented to make it unique | Organism (ID 16984): Acinetobacter baumannii LUH5540 Exact full structure is unknownCSDB ID(s): 6750, 27746, 29555, 30928, 118214 Molecule role: CPS | Hu et al. 2013 DOI: 10.1371/journal.pone.0070329 |
| Enzyme name: Gtr157 (WagE) Enzyme GenBank ID: AHB32413.1 UniProt ID: V5RB30_ACIBA CAZy family: 2 Gene name: wagE | Synthesized dimer: aLRhap(1-3)aDGlcpN Donor (ID 35153): ?LRhap(1-P-P-5)xXnucdT Acceptor (ID 36197): Ac(1-2)aDGlcpN Status: predicted in silico
Confirmation methods: Sequencing (gene, protein) ID: 3501 Notes: gene cluster name: PSgc10, KL84 | Organism (ID 16984): Acinetobacter baumannii LUH5540 Exact full structure is unknownCSDB ID(s): 6750, 27746, 29555, 30928, 118214 Molecule role: CPS | |
| Synthesized dimer: aLRhap(1-3)aLRhap Donor (ID 35153): ?LRhap(1-P-P-5)xXnucdT Acceptor (ID 36198): aLRhap(1-3)[Ac(1-2)]aDGlcpN Status: predicted in silico
Confirmation methods: Sequencing (gene, protein) ID: 3502 Notes: gene cluster name: PSgc10, KL84 | Organism (ID 16984): Acinetobacter baumannii LUH5540 Exact full structure is unknownCSDB ID(s): 6750, 27746, 29555, 30928, 118214 Molecule role: CPS | ||
| Enzyme name: Gtr156 (WagD) Enzyme GenBank ID: AHB32412.1 UniProt ID: V5RBF6_ACIBA CAZy family: 2 Gene name: wagD | Synthesized dimer: aLRhap(1-2)aLRhap Donor (ID 35153): ?LRhap(1-P-P-5)xXnucdT Acceptor (ID 36199): aLRhap(1-3)aLRhap(1-3)[Ac(1-2)]aDGlcpN Status: predicted in silico
Confirmation methods: Sequencing (gene, protein) ID: 3503 Notes: gene cluster name: PSgc10, KL84 | Organism (ID 16984): Acinetobacter baumannii LUH5540 Exact full structure is unknownCSDB ID(s): 6750, 27746, 29555, 30928, 118214 Molecule role: CPS | |
| Enzyme name: Gtr155 (WagC) Enzyme GenBank ID: AHB32410.1 CAZy family: 4 Gene name: wagC | Synthesized dimer: aDManpN(1-3)aLRhap Donor (ID 36200): Ac(1-2)?DManpN(1-P-P-5)xXnucU Acceptor (ID 36201): aLRhap(1-2)aLRhap(1-3)aLRhap(1-3)[Ac(1-2)]aDGlcpN Status: predicted in silico
Confirmation methods: Sequencing (gene, protein) ID: 3504 Notes: gene cluster name: PSgc10, KL84 | Organism (ID 16984): Acinetobacter baumannii LUH5540 Exact full structure is unknownCSDB ID(s): 6750, 27746, 29555, 30928, 118214 Molecule role: CPS | |
| Enzyme name: WzyK52 Enzyme GenBank ID: AHB32334.1 Gene name: wzy | Synthesized dimer: bDGalpN(1-3)bDGalp Donor (ID 35669): Ac(1-2)?DGalpN(1-P-P-5)xXnucU Acceptor (ID 36202): -3)[Ac(1-2)bDManpN(1-4)aDGalp(1-4)]bDGalp(1-3)[Ac(1-2)]bDGalpN(1- Status: predicted in silico
Confirmation methods: Sequencing (gene, protein) ID: 3505 Notes: gene cluster name: PSgc18, KL52; name was augmented to make it unique | Organism (ID 16985): Acinetobacter baumannii LUH5546 Exact full structure is unknownCSDB ID(s): 483, 6702, 27750, 29559, 30586, 30932 Molecule role: CPS | |
| Enzyme name: Gtr5 (WafH) Enzyme GenBank ID: AHB32332.2 CAZy family: 2 Gene name: wafH | Synthesized dimer: bDGalp(1-3)bDGalpN Donor (ID 35273): ?DGalp(1-P-P-5)xXnucU Acceptor (ID 36203): Ac(1-2)bDGalpN Status: predicted in silico
Confirmation methods: Sequencing (gene, protein) ID: 3506 Notes: gene cluster name: PSgc18, KL52 | Organism (ID 16985): Acinetobacter baumannii LUH5546 Exact full structure is unknownCSDB ID(s): 483, 6702, 27750, 29559, 30586, 30932 Molecule role: CPS | |
| Enzyme name: Gtr107 (WagT) Enzyme GenBank ID: AHB32335.2 Gene name: wagT | Synthesized dimer: aDGalp(1-4)bDGalp Donor (ID 35273): ?DGalp(1-P-P-5)xXnucU Acceptor (ID 36204): bDGalp(1-3)[Ac(1-2)]bDGalpN Status: predicted in silico
Confirmation methods: Sequencing (gene, protein) ID: 3507 Notes: gene cluster name: PSgc18, KL52 | Organism (ID 16985): Acinetobacter baumannii LUH5546 Exact full structure is unknownCSDB ID(s): 483, 6702, 27750, 29559, 30586, 30932 Molecule role: CPS | |
| Enzyme name: Gtr108 (WagU) Enzyme GenBank ID: AHB32333.1 CAZy family: 4 Gene name: wagU | Synthesized dimer: bDManpN(1-4)aDGalp Donor (ID 36200): Ac(1-2)?DManpN(1-P-P-5)xXnucU Acceptor (ID 36205): aDGalp(1-4)bDGalp(1-3)[Ac(1-2)]bDGalpN Status: predicted in silico
Confirmation methods: Sequencing (gene, protein) ID: 3508 Notes: gene cluster name: PSgc18, KL52 | Organism (ID 16985): Acinetobacter baumannii LUH5546 Exact full structure is unknownCSDB ID(s): 483, 6702, 27750, 29559, 30586, 30932 Molecule role: CPS | |
| Enzyme name: Wzy_PSgc23 Enzyme GenBank ID: AHB32637.1 Gene name: wzy | Synthesized dimer: bDGlcpN(1-3)bDGalpN Donor (ID 35226): Ac(1-2)?DGlcpN(1-P-P-5)xXnucU Acceptor (ID 36206): -3)[lR3HOBut(1-3)bDQuip3N(1-6)[Ac(1-2)]aDGlcpN(1-4),Ac(1-2)]bDGalpN(1-3)aDGalp(1-3)[Ac(1-2)]bDGlcpN(1- Status: predicted in silico
Confirmation methods: Sequencing (gene, protein) ID: 3509 Notes: gene cluster name: PSgc23; name was augmented to make it unique | Organism (ID 16986,16987): Acinetobacter baumannii LUH3712, LUH3714 Exact full structure is unknownCSDB ID(s): 493, 6712, 27748, 29557, 30930 Molecule role: CPS | |
| Enzyme name: Gtr99 (WagP) Enzyme GenBank ID: AHB32635.2 CAZy family: 4 Gene name: wagP | Synthesized dimer: aDGalp(1-3)bDGlcpN Donor (ID 35273): ?DGalp(1-P-P-5)xXnucU Acceptor (ID 36207): Ac(1-2)bDGlcpN Status: predicted in silico
Confirmation methods: Sequencing (gene, protein) ID: 3510 Notes: gene cluster name: PSgc23 | Organism (ID 16986,16987): Acinetobacter baumannii LUH3712, LUH3714 Exact full structure is unknownCSDB ID(s): 493, 6712, 27748, 29557, 30930 Molecule role: CPS | |
| Enzyme name: Gtr151 (WagS) Enzyme GenBank ID: AHB32714.1 UniProt ID: V5RBJ1_ACIBA CAZy family: 2 Gene name: wagS | Synthesized dimer: bDGalpN(1-3)aDGalp Donor (ID 35669): Ac(1-2)?DGalpN(1-P-P-5)xXnucU Acceptor (ID 36208): aDGalp(1-3)[Ac(1-2)]bDGlcpN Status: predicted in silico
Confirmation methods: Sequencing (gene, protein) ID: 3511 Notes: gene cluster name: PSgc23 | Organism (ID 16986,16987): Acinetobacter baumannii LUH3712, LUH3714 Exact full structure is unknownCSDB ID(s): 493, 6712, 27748, 29557, 30930 Molecule role: CPS | |
| Enzyme name: Gtr150 (WagR) Enzyme GenBank ID: AHB32638.1 CAZy family: 32 Gene name: wagR | Synthesized dimer: aDGlcpN(1-4)bDGalpN Donor (ID 35669): Ac(1-2)?DGalpN(1-P-P-5)xXnucU Acceptor (ID 36209): Ac(1-2)bDGalpN(1-3)aDGalp(1-3)[Ac(1-2)]bDGlcpN Status: predicted in silico
Confirmation methods: Sequencing (gene, protein) ID: 3512 Notes: gene cluster name: PSgc23, retaining | Organism (ID 16986,16987): Acinetobacter baumannii LUH3712, LUH3714 Exact full structure is unknownCSDB ID(s): 493, 6712, 27748, 29557, 30930 Molecule role: CPS | |
| Enzyme name: Gtr149 (WagQ) Enzyme GenBank ID: AHB32717.1 UniProt ID: V5RCG6_ACIBA CAZy family: 2 Gene name: wagQ | Synthesized dimer: bDQuip3N(1-6)aDGlcpN Donor (ID 36210): lR3HOBut(1-4)[Ac(1-2)]?DQuipN(1-P-P-5)xXnucU Acceptor (ID 36211): Ac(1-2)aDGlcpN(1-4)[Ac(1-2)]bDGalpN(1-3)aDGalp(1-3)[Ac(1-2)]bDGlcpN Status: predicted in silico
Confirmation methods: Sequencing (gene, protein) ID: 3513 Notes: gene cluster name: PSgc23 | Organism (ID 16986,16987): Acinetobacter baumannii LUH3712, LUH3714 Exact full structure is unknownCSDB ID(s): 493, 6712, 27748, 29557, 30930 Molecule role: CPS | |
| Enzyme name: WzyK63 Enzyme GenBank ID: AHB32586.1 Gene name: wzy Gene cluster ID: KC526909.1 | Synthesized dimer: aDGlcpN(1-4)bLegp Donor (ID 35226): Ac(1-2)?DGlcpN(1-P-P-5)xXnucU Acceptor (ID 36212): -4)[Ac(1-7),Ac(1-5)]bXLegp(2-6)[Ac(1-2)]aDGlcpN(1-3)[Ac(1-2)]aLFucpN(1-3)[Ac(1-2)]aDGlcpN(1- Status: predicted in silico
Confirmation methods: Sequencing (gene, protein) ID: 3514 Notes: gene cluster name: PSgc24, KL63; name was augmented to make it unique | Organism (ID 16988): Acinetobacter baumannii LUH5551 Full structure (ID 11236): CSDB ID(s): 600, 6749, 21181, 27752, 29561, 30934, 31933 Molecule role: CPS | Hu et al. 2013 DOI: 10.1371/journal.pone.0070329 Arbatsky et al. 2019b DOI: 10.1016/j.carres.2019.107745 |
| Enzyme name: Gtr20K63 (WafP) Enzyme GenBank ID: AHB32591.1 CAZy family: 4 Gene name: gtr20 Gene cluster ID: KC526909.1 | Synthesized dimer: aLFucpN(1-3)aDGlcpN Donor (ID 36213): Ac(1-2)?LFucpN(1-P-P-5)xXnucU Acceptor (ID 36197): Ac(1-2)aDGlcpN Status: predicted in silico
Confirmation methods: Sequencing (gene, protein) ID: 3515 Notes: gene cluster name: PSgc24, KL63 | Organism (ID 16988): Acinetobacter baumannii LUH5551 Full structure (ID 11236): CSDB ID(s): 600, 6749, 21181, 27752, 29561, 30934, 31933 Molecule role: CPS | Hu et al. 2013 DOI: 10.1371/journal.pone.0070329 |
| Enzyme name: Gtr128 (WahG) Enzyme GenBank ID: AHB32587.1 CAZy family: 4 Gene name: wahG Gene cluster ID: KC526909.1 | Synthesized dimer: aDGlcpN(1-3)aLFucpN Donor (ID 35669): Ac(1-2)?DGalpN(1-P-P-5)xXnucU Acceptor (ID 36214): Ac(1-2)aLFucpN(1-3)[Ac(1-2)]aDGlcpN Status: predicted in silico
Confirmation methods: Sequencing (gene, protein) ID: 3516 Notes: gene cluster name: PSgc24, KL63 | Organism (ID 16988): Acinetobacter baumannii LUH5551 Full structure (ID 11236): CSDB ID(s): 600, 6749, 21181, 27752, 29561, 30934, 31933 Molecule role: CPS | |
| Enzyme name: Wzy_PSgc5 Enzyme GenBank ID: AHB32242.2 Gene name: wzy | Synthesized dimer: bDGlcpN(1-3)aDGalpNA Donor (ID 35669): Ac(1-2)?DGalpN(1-P-P-5)xXnucU Acceptor (ID 36215): -3)[Ac(1-2)aLFucpN(1-4),Ac(1-2)]aDGalpNA(1-3)[Ac(1-2)]aLFucpN(1-3)[Ac(1-2)]bDGlcpN(1- Status: predicted in silico
Confirmation methods: Sequencing (gene, protein) ID: 3517 Notes: gene cluster name: PSgc5, KL9; name was augmented to make it unique | Organism (ID 16989,16990,16991,16992,16993): Acinetobacter baumannii ABNIH2, D1279779, LUH3484, MDR_TJ, OIFC098 Full structure (ID 726): CSDB ID(s): 487, 5524, 6719, 8543, 25168, 27744, 29553, 30926 Molecule role: CPS | |
| Enzyme name: Gtr20 (WafP) Enzyme GenBank ID: AHB32236.1 CAZy family: 4 Gene name: wafP | Synthesized dimer: aLFucpN(1-3)bDGlcpN Donor (ID 36213): Ac(1-2)?LFucpN(1-P-P-5)xXnucU Acceptor (ID 36207): Ac(1-2)bDGlcpN Status: predicted in silico
Confirmation methods: Sequencing (gene, protein) ID: 3518 Notes: gene cluster name: PSgc5, KL9 | Organism (ID 16989,16990,16991,16992,16993): Acinetobacter baumannii ABNIH2, D1279779, LUH3484, MDR_TJ, OIFC098 Full structure (ID 726): CSDB ID(s): 487, 5524, 6719, 8543, 25168, 27744, 29553, 30926 Molecule role: CPS | |
| Enzyme name: Gtr22 (WafO) Enzyme GenBank ID: AHB32240.1 UniProt ID: N0A2B1_ACIBA CAZy family: 4 Gene name: wafO | Synthesized dimer: aDGalpNA(1-3)aLFucpN Donor (ID 36216): Ac(1-2)?DGalpNA(1-P-P-5)xXnucU Acceptor (ID 36217): Ac(1-2)aLFucpN(1-3)[Ac(1-2)]bDGlcpN Status: predicted in silico
Confirmation methods: Sequencing (gene, protein) ID: 3519 Notes: gene cluster name: PSgc5, KL9 | Organism (ID 16989,16990,16991,16992,16993): Acinetobacter baumannii ABNIH2, D1279779, LUH3484, MDR_TJ, OIFC098 Full structure (ID 726): CSDB ID(s): 487, 5524, 6719, 8543, 25168, 27744, 29553, 30926 Molecule role: CPS | |
| Enzyme name: Gtr21 (WafN) Enzyme GenBank ID: AHB32241.1 UniProt ID: N0A4D9_ACIBA CAZy family: 4 Gene name: wafN | Synthesized dimer: aLFucpN(1-4)aDGalpNA Donor (ID 36213): Ac(1-2)?LFucpN(1-P-P-5)xXnucU Acceptor (ID 36218): Ac(1-2)aDGalpNA(1-3)[Ac(1-2)]aLFucpN(1-3)[Ac(1-2)]bDGlcpN Status: predicted in silico
Confirmation methods: Sequencing (gene, protein) ID: 3520 Notes: gene cluster name: PSgc5, KL9 | Organism (ID 16989,16990,16991,16992,16993): Acinetobacter baumannii ABNIH2, D1279779, LUH3484, MDR_TJ, OIFC098 Full structure (ID 726): CSDB ID(s): 487, 5524, 6719, 8543, 25168, 27744, 29553, 30926 Molecule role: CPS | |
| Enzyme name: QdhC UniProt ID: V5RAN8_ACIBA Gene name: qdhC | Synthesized dimer: R3HOBut(1-3)DQuip3N Acceptor (ID 36219): ?DQuip3N(1-P-P-5)xXnucdT Status: predicted in silico
Confirmation methods: Sequencing (gene, protein) ID: 3521 | Organism (ID 16994): Acinetobacter baumannii LUH5554 Full structure (ID 36220): Molecule role: activated monosaccharide | |
| Enzyme name: LgaG (Leg7) UniProt ID: V5RAH8_ACIBA Gene name: leg7 | Synthesized dimer: Legp(2-?)P Donor (ID 36221): Ac(1-5)[Ac(1-7)]?XLegp Acceptor (ID 36222): P-5)xXnucC Status: predicted in silico
Confirmation methods: Sequencing (gene, protein) ID: 3522 | Organism (ID 6966): Acinetobacter baumannii LUH5533 Full structure (ID 36223): Molecule role: activated monosaccharide | |
| Enzyme name: PsaC (Psb3) UniProt ID: V5RBH4_ACIBA Gene name: psb3 | Synthesized dimer: Psep(2-?)P Donor (ID 36224): lR3HOBut(1-7)[Ac(1-5)]?XPsep Acceptor (ID 36222): P-5)xXnucC Status: predicted in silico
Confirmation methods: Sequencing (gene, protein) ID: 3523 | Organism (ID 6961): Acinetobacter baumannii LUH5550 Full structure (ID 36225): Molecule role: activated monosaccharide | |
| Enzyme name: PsaE (Psb5) UniProt ID: V5RC92_ACIBA Gene name: psb5 | Synthesized dimer: R3HOBut(1-4)bL6dAltpN4N Acceptor (ID 36226): Ac(1-2)[Ac(1-4)]bL6dAltpN4N(1-P-P-5)xXnucU Status: predicted in silico
Confirmation methods: Sequencing (gene, protein) ID: 3524 | Organism (ID 16995): Acinetobacter baumannii LUH5553 Full structure (ID 36227): Molecule role: activated monosaccharide | |
| Enzyme name: LgaI (Leg3) UniProt ID: V5RBD4_ACIBA Gene name: leg3 | Synthesized dimer: Ac(1-4)DQuipN4N Acceptor (ID 36228): Ac(1-2)?DQuipN4N(1-P-P-5)xXnucU Status: predicted in silico
Confirmation methods: Sequencing (gene, protein) ID: 3525 | Organism (ID 16988): Acinetobacter baumannii LUH5551 Full structure (ID 36229): Molecule role: activated monosaccharide | |
| Enzyme name: PglC Enzyme GenBank ID: ABO10556.2 Gene name: pglC Gene cluster ID: A1S_0061 | Synthesized dimer: P(?-?)P Donor (ID 35669): Ac(1-2)?DGalpN(1-P-P-5)xXnucU Acceptor (ID 35735): P-1)Subst // Subst = undecaprenol Status: evidence in vitro
Confirmation methods: mutation ID: 3526 Notes: gene cluster name: KL3, phosphoglycosyltransferase | Organism (ID 5039,6893): Acinetobacter baumannii ATCC 17978, LUH5537 Organ/tissue: Escherichia coli CLM37 Full structure (ID 36230): Molecule role: CPS | Lees-Miller et al. 2013 DOI: 10.1111/mmi.12300 |
| Enzyme name: PsaE Enzyme GenBank ID: AHM95423.1 Gene name: psaE | Synthesized dimer: Ac(1-4)bL6dAltpN4N Acceptor (ID 36231): Ac(1-2)bL6dAltpN4N(1-P-P-5)xXnucU Status: predicted in silico
Confirmation methods: Sequencing (gene, protein) ID: 3527 Notes: gene cluster name: KL2 | Organism (ID 6994): Acinetobacter baumannii A74 Full structure (ID 7940): CSDB ID(s): 23112, 24191 Molecule role: activated monosaccharide | Kenyon et al. 2014 DOI: 10.1093/glycob/cwu024 |
| Enzyme name: ItrA2K2 Enzyme GenBank ID: AHM95431.1 Gene name: itrA2 Gene cluster ID: KJ459911 | Synthesized dimer: P(?-?)P Donor (ID 35669): Ac(1-2)?DGalpN(1-P-P-5)xXnucU Acceptor (ID 35735): P-1)Subst // Subst = undecaprenol Status: predicted in silico
Confirmation methods: Sequencing (gene, protein) ID: 3528 Notes: gene cluster name: KL2, PSgc12; phosphoglycosyltransferase; name was augmented to make it unique | Organism (ID 6775,6994): Acinetobacter baumannii ACICU, A74 Full structure (ID 36232): Molecule role: CPS | |
| Enzyme name: WzyK2 Enzyme GenBank ID: AHM95427.1 Gene name: wzy Gene cluster ID: KJ459911 | Synthesized dimer: bDGalpN(1-3)bDGalp Donor (ID 36233): Ac(1-5)[Ac(1-7)]?XPsep(2-6)bDGlcp(1-6)bDGalp(1-3)[Ac(1-2)]bDGalpN(1-P-P-1)Subst // Subst = undecaprenol Acceptor (ID 36234): -3)[Ac(1-5)[Ac(1-7)]?XPsep(2-6)bDGlcp(1-6)]bDGalp(1-3)[Ac(1-2)]bDGalpN(1- Status: predicted in silico
Confirmation methods: Sequencing (gene, protein) ID: 3529 Notes: gene cluster name: KL2, PSgc12 | Organism (ID 6775,6994): Acinetobacter baumannii ACICU, A74 Full structure (ID 11615): CSDB ID(s): 1362, 2304, 6701, 9744, 30077, 30130, 30766, 30859, 30942 Molecule role: CPS | |
| Enzyme name: Gtr5K2 Enzyme GenBank ID: AHM95430 Gene name: gtr5 Gene cluster ID: KJ459911 | Synthesized dimer: bDGalp(1-3)bDGalpN Donor (ID 35273): ?DGalp(1-P-P-5)xXnucU Acceptor (ID 36235): Ac(1-2)bDGalpN(1-P-P-1)Subst // Subst = undecaprenol Status: predicted in silico
Confirmation methods: Sequencing (gene, protein) ID: 3530 Notes: gene cluster name: KL2, PSgc12 | Organism (ID 6775,6994): Acinetobacter baumannii ACICU, A74 Full structure (ID 11615): CSDB ID(s): 1362, 2304, 6701, 9744, 30077, 30130, 30766, 30859, 30942 Molecule role: CPS | |
| Enzyme name: Gtr4 Enzyme GenBank ID: AHM95429.1 Gene name: gtr4 Gene cluster ID: KJ459911 | Synthesized dimer: bDGlcp(1-6)bDGalp Donor (ID 34839): ?DGlcp(1-P-P-5)xXnucU Acceptor (ID 36236): bDGalp(1-3)[Ac(1-2)]bDGalpN(1-P-P-1)Subst // Subst = undecaprenol Status: predicted in silico
Confirmation methods: Sequencing (gene, protein) ID: 3531 Notes: gene cluster name: KL2, PSgc12 | Organism (ID 6775,6994): Acinetobacter baumannii ACICU, A74 Full structure (ID 11615): CSDB ID(s): 1362, 2304, 6701, 9744, 30077, 30130, 30766, 30859, 30942 Molecule role: CPS | |
| Enzyme name: KpsS1 Enzyme GenBank ID: AHM95426.1 Gene name: kpsS Gene cluster ID: KJ459911 | Synthesized dimer: aPsep(2-6)bDGlcp Donor (ID 36237): Ac(1-5)[Ac(1-7)]?XPsep(2-P-5)xXnucC Acceptor (ID 36238): bDGlcp(1-6)bDGalp(1-3)[Ac(1-2)]bDGalpN(1-P-P-1)Subst // Subst = undecaprenol Status: predicted in silico
Confirmation methods: Sequencing (gene, protein) ID: 3532 Notes: gene cluster name: KL2, PSgc12 | Organism (ID 6775,6994): Acinetobacter baumannii ACICU, A74 Full structure (ID 11615): CSDB ID(s): 1362, 2304, 6701, 9744, 30077, 30130, 30766, 30859, 30942 Molecule role: CPS | |
| Enzyme name: PsaC Enzyme GenBank ID: AHM95421.1 Gene name: psaC | Synthesized dimer: Psep(2-?)P Donor (ID 36239): P-P-P-5)xXnucC Acceptor (ID 36240): Ac(1-5)?XPsep Status: predicted in silico
Confirmation methods: Sequencing (gene, protein) ID: 3533 | Organism (ID 6994): Acinetobacter baumannii A74 Full structure (ID 7943): CSDB ID(s): 23115, 23138 Molecule role: activated monosaccharide | |
| Enzyme name: Gtr9K22 Enzyme GenBank ID: AHB32890.1 Gene name: gtr9 Gene cluster ID: KC526920 | Synthesized dimer: bDGlcp(1-3)bDGalpN Donor (ID 34839): ?DGlcp(1-P-P-5)xXnucU Acceptor (ID 36235): Ac(1-2)bDGalpN(1-P-P-1)Subst // Subst = undecaprenol Status: predicted in silico
Confirmation methods: Sequencing (gene, protein) ID: 3534 Notes: gene cluster name: KL22, PSgc9; name was augmented to make it unique | Organism (ID 6893): Acinetobacter baumannii LUH5537 Full structure (ID 36241): Molecule role: CPS | Arbatsky et al. 2015 DOI: 10.1016/j.carres.2015.05.003 |
| Enzyme name: Gtr9K3 Enzyme GenBank ID: ABO10555.2 Gene name: gtr9 Gene cluster ID: CP000521 | Synthesized dimer: bDGlcp(1-3)bDGalpN Donor (ID 34839): ?DGlcp(1-P-P-5)xXnucU Acceptor (ID 36235): Ac(1-2)bDGalpN(1-P-P-1)Subst // Subst = undecaprenol Status: predicted in silico
Confirmation methods: Sequencing (gene, protein) ID: 3535 Notes: gene cluster name: KL3 ; name was augmented to make it unique | Organism (ID 5039,6893): Acinetobacter baumannii ATCC 17978, LUH5537 Full structure (ID 36241): Molecule role: CPS | |
| Enzyme name: Gtr8 Enzyme GenBank ID: ABO10554.2 Gene name: gtr8 Gene cluster ID: CP000521 | Synthesized dimer: aDGalp(1-6)bDGlcp Donor (ID 35273): ?DGalp(1-P-P-5)xXnucU Acceptor (ID 36242): bDGlcp(1-3)[Ac(1-2)]bDGalpN Status: predicted in silico
Confirmation methods: Sequencing (gene, protein) ID: 3536 Notes: gene cluster name: KL3 | Organism (ID 5039,6893): Acinetobacter baumannii ATCC 17978, LUH5537 Full structure (ID 36241): Molecule role: CPS | |
| Enzyme name: WzyK37 Enzyme GenBank ID: AQQ74322.1 Gene name: wzy Gene cluster ID: APOU01000009 | Synthesized dimer: bDGalpN(1-3)bDGalpN Donor (ID 36243): bDGlcp(1-6)[Ac(1-2)]bDGalpN(1-4)aDGalp(1-6)bDGlcp(1-3)[Ac(1-2)]bDGalpN(1-P-P-1)Subst // Subst = undecaprenol Acceptor (ID 36244): -3)[bDGlcp(1-6),Ac(1-2)]bDGalpN(1-4)aDGalp(1-6)bDGlcp(1-3)[Ac(1-2)]bDGalpN(1- Status: predicted in silico
Confirmation methods: Sequencing (gene, protein) ID: 3537 Notes: gene cluster name: KL37 | Organism (ID 16996): Acinetobacter baumannii NIPH146 Exact full structure is unknown Molecule role: CPS | |
| Enzyme name: ItrA2K37 Enzyme GenBank ID: ENU67367 Gene name: itrA2 Gene cluster ID: APOU01000009 | Synthesized dimer: P(?-?)P Donor (ID 35669): Ac(1-2)?DGalpN(1-P-P-5)xXnucU Acceptor (ID 35735): P-1)Subst // Subst = undecaprenol Status: predicted in silico
Confirmation methods: Sequencing (gene, protein) ID: 3538 Notes: revised in Shashkov et al. (10.1016/j.carres.2019.107774), gene cluster name: KL37, phosphoglycosyltransferase; name was augmented to make it unique | Organism (ID 16996): Acinetobacter baumannii NIPH146 Exact full structure is unknown Molecule role: CPS | Arbatsky et al. 2015 DOI: 10.1016/j.carres.2015.05.003 Shashkov et al. 2019 DOI: 10.1016/j.carres.2019.107774 |
| Enzyme name: Gtr9K37 Enzyme GenBank ID: ENU67366 Gene name: gtr9 Gene cluster ID: APOU01000009 | Synthesized dimer: bDGlcp(1-3)bDGalpN Donor (ID 34839): ?DGlcp(1-P-P-5)xXnucU Acceptor (ID 36235): Ac(1-2)bDGalpN(1-P-P-1)Subst // Subst = undecaprenol Status: predicted in silico
Confirmation methods: Sequencing (gene, protein) ID: 3539 Notes: revised in Shashkov et al. (10.1016/j.carres.2019.107774), gene cluster name: KL37; name was augmented to make it unique | Organism (ID 16996): Acinetobacter baumannii NIPH146 Exact full structure is unknown Molecule role: CPS | |
| Enzyme name: Gtr77K37 Enzyme GenBank ID: ENU67365 Gene name: gtr77 Gene cluster ID: APOU01000009 | Synthesized dimer: aDGalp(1-6)bDGlcp Donor (ID 35273): ?DGalp(1-P-P-5)xXnucU Acceptor (ID 36245): bDGlcp(1-3)[Ac(1-2)]bDGalpN(1-P-P-1)Subst // Subst = undecaprenol Status: predicted in silico
Confirmation methods: Sequencing (gene, protein) ID: 3540 Notes: revised in Shashkov et al. (10.1016/j.carres.2019.107774), gene cluster name: KL37; name was augmented to make it unique | Organism (ID 16996): Acinetobacter baumannii NIPH146 Exact full structure is unknown Molecule role: CPS | |
| Enzyme name: Gtr76K37 Enzyme GenBank ID: ENU67363 Gene name: gtr76 Gene cluster ID: APOU01000009 | Synthesized dimer: bDGalpN(1-4)aDGalp Donor (ID 35669): Ac(1-2)?DGalpN(1-P-P-5)xXnucU Acceptor (ID 36246): aDGalp(1-6)bDGlcp(1-3)[Ac(1-2)]bDGalpN(1-P-P-1)Subst // Subst = undecaprenol Status: predicted in silico
Confirmation methods: Sequencing (gene, protein) ID: 3541 Notes: revised in Shashkov et al. (10.1016/j.carres.2019.107774), gene cluster name: KL37; name was augmented to make it unique | Organism (ID 16996): Acinetobacter baumannii NIPH146 Exact full structure is unknown Molecule role: CPS | |
| Enzyme name: Gtr75K37 Enzyme GenBank ID: ENU67362 Gene name: gtr75 Gene cluster ID: APOU01000009 | Synthesized dimer: bDGlcp(1-6)bDGalpN Donor (ID 34839): ?DGlcp(1-P-P-5)xXnucU Acceptor (ID 36247): Ac(1-2)bDGalpN(1-4)aDGalp(1-6)bDGlcp(1-3)[Ac(1-2)]bDGalpN(1-P-P-1)Subst // Subst = undecaprenol Status: predicted in silico
Confirmation methods: Sequencing (gene, protein) ID: 3542 Notes: revised in Shashkov et al. (10.1016/j.carres.2019.107774), gene cluster name: KL37; name was augmented to make it unique | Organism (ID 16996): Acinetobacter baumannii NIPH146 Exact full structure is unknown Molecule role: CPS | |
| Enzyme name: WzyK6 Enzyme GenBank ID: AGM37789.1 Gene name: wzy Gene cluster ID: KF130871 | Synthesized dimer: aDGalpN(1-4)bPsep Donor (ID 35669): Ac(1-2)?DGalpN(1-P-P-5)xXnucU Acceptor (ID 36248): -4)[Ac(1-7),Ac(1-5)]bXPsep(2-6)bDGalp(1-6)bDGalp(1-3)[Ac(1-2)]aDGalpN(1- Status: predicted in silico
Confirmation methods: Sequencing (gene, protein) ID: 3543 Notes: gene cluster name: KL6 | Organism (ID 6908): Acinetobacter baumannii RBH4 Full structure (ID 11921): CSDB ID(s): 2305, 6747, 30619 Molecule role: CPS | Kenyon et al. 2015a DOI: 10.1016/j.carres.2015.03.016 |
| Enzyme name: ItrA2K6 Enzyme GenBank ID: AGM37792.1 Gene name: itrA2 Gene cluster ID: KF130871 | Synthesized dimer: P(?-?)P Donor (ID 35669): Ac(1-2)?DGalpN(1-P-P-5)xXnucU Acceptor (ID 35735): P-1)Subst // Subst = undecaprenol Status: predicted in silico
Confirmation methods: Sequencing (gene, protein) ID: 3544 Notes: gene cluster name: KL6, phosphoglycosyltransferase; name was augmented to make it unique | Organism (ID 6908): Acinetobacter baumannii RBH4 Full structure (ID 36249): Molecule role: CPS | |
| Enzyme name: Gtr5K6 Enzyme GenBank ID: AGM37791 Gene name: gtr5 Gene cluster ID: KF130871 | Synthesized dimer: bDGalp(1-3)aDGalpN Donor (ID 35273): ?DGalp(1-P-P-5)xXnucU Acceptor (ID 36250): Ac(1-2)aDGalpN(1-P-P-1)Subst // Subst = undecaprenol Status: predicted in silico
Confirmation methods: Sequencing (gene, protein) ID: 3545 Notes: gene cluster name: KL6; name was augmented to make it unique | Organism (ID 6908): Acinetobacter baumannii RBH4 Full structure (ID 11921): CSDB ID(s): 2305, 6747, 30619 Molecule role: CPS | |
| Enzyme name: Gtr17 Enzyme GenBank ID: AGM37790.1 Gene name: gtr17 Gene cluster ID: KF130871 | Synthesized dimer: bDGalp(1-6)bDGalp Donor (ID 35273): ?DGalp(1-P-P-5)xXnucU Acceptor (ID 36251): bDGalp(1-3)[Ac(1-2)]aDGalpN(1-P-P-1)Subst // Subst = undecaprenol Status: predicted in silico
Confirmation methods: Sequencing (gene, protein) ID: 3546 Notes: gene cluster name: KL6 | Organism (ID 6908): Acinetobacter baumannii RBH4 Full structure (ID 11921): CSDB ID(s): 2305, 6747, 30619 Molecule role: CPS | |
| Enzyme name: Gtr16 Enzyme GenBank ID: AGM37788.1 CAZy family: GT52 Gene name: gtr16 Gene cluster ID: KF130871 | Synthesized dimer: bPsep(2-6)bDGalp Donor (ID 36237): Ac(1-5)[Ac(1-7)]?XPsep(2-P-5)xXnucC Acceptor (ID 36252): bDGalp(1-6)bDGalp(1-3)[Ac(1-2)]aDGalpN(1-P-P-1)Subst // Subst = undecaprenol Status: predicted in silico
Confirmation methods: Sequencing (gene, protein) ID: 3547 Notes: inverting GT, gene cluster name: KL6 | Organism (ID 6908): Acinetobacter baumannii RBH4 Full structure (ID 11921): CSDB ID(s): 2305, 6747, 30619 Molecule role: CPS | |
| Enzyme name: WzyK14 Enzyme GenBank ID: AKC34376.1 Gene name: wzy Gene cluster ID: KF030679 | Synthesized dimer: aDGalpN(1-4)bDGalpN Donor (ID 36253): bDGlcp(1-6)[Ac(1-2)]bDGalpN(1-3)aDGalp(1-6)bDGalp(1-3)[Ac(1-2)]aDGalpN(1-P-P-1)Subst // Subst = undecaprenol Acceptor (ID 36254): -4)[bDGlcp(1-6),Ac(1-2)]bDGalpN(1-3)aDGalp(1-6)bDGalp(1-3)[Ac(1-2)]aDGalpN(1- Status: predicted in silico
Confirmation methods: Sequencing (gene, protein) ID: 3548 Notes: gene cluster name: KL14, PSgc11 | Organism (ID 6907): Acinetobacter baumannii D46 Full structure (ID 2075): CSDB ID(s): 485, 2292, 5846, 6738, 27747, 29556, 30618, 30929 Molecule role: CPS | Kenyon et al. 2015b DOI: 10.1016/j.carres.2015.09.002 |
| Enzyme name: ItrA2K14 Enzyme GenBank ID: AKC34380.1 Gene name: itrA2 Gene cluster ID: KF030679 | Synthesized dimer: P(?-?)P Donor (ID 35669): Ac(1-2)?DGalpN(1-P-P-5)xXnucU Acceptor (ID 35735): P-1)Subst // Subst = undecaprenol Status: predicted in silico
Confirmation methods: Sequencing (gene, protein) ID: 3549 Notes: gene cluster name: KL14, PSgc11 phosphoglycosyltransferase; name was augmented to make it unique | Organism (ID 6907): Acinetobacter baumannii D46 Exact full structure is unknown Molecule role: CPS | |
| Enzyme name: Gtr5K14 Enzyme GenBank ID: AKC34379 CAZy family: GT2 Gene name: gtr5 Gene cluster ID: KF030679 | Synthesized dimer: bDGalp(1-3)aDGalpN Donor (ID 35273): ?DGalp(1-P-P-5)xXnucU Acceptor (ID 36250): Ac(1-2)aDGalpN(1-P-P-1)Subst // Subst = undecaprenol Status: predicted in silico
Confirmation methods: Sequencing (gene, protein) ID: 3550 Notes: inverting GT, gene cluster name: KL14, PSgc11 | Organism (ID 6907): Acinetobacter baumannii D46 Full structure (ID 2075): CSDB ID(s): 485, 2292, 5846, 6738, 27747, 29556, 30618, 30929 Molecule role: CPS | |
| Enzyme name: Gtr25K14 Enzyme GenBank ID: KC34378.1 Gene name: gtr25 Gene cluster ID: KF030679 | Synthesized dimer: aDGalp(1-6)bDGalp Donor (ID 35273): ?DGalp(1-P-P-5)xXnucU Acceptor (ID 36251): bDGalp(1-3)[Ac(1-2)]aDGalpN(1-P-P-1)Subst // Subst = undecaprenol Status: predicted in silico
Confirmation methods: Sequencing (gene, protein) ID: 3551 Notes: retaining GT, gene cluster name: KL14, PSgc11; name was augmented to make it unique | Organism (ID 6907): Acinetobacter baumannii D46 Full structure (ID 2075): CSDB ID(s): 485, 2292, 5846, 6738, 27747, 29556, 30618, 30929 Molecule role: CPS | |
| Enzyme name: Gtr33 Enzyme GenBank ID: AKC34377.1 CAZy family: GT2 Gene name: gtr33 Gene cluster ID: KF030679 | Synthesized dimer: bDGalpN(1-3)aDGalp Donor (ID 35669): Ac(1-2)?DGalpN(1-P-P-5)xXnucU Acceptor (ID 36255): aDGalp(1-6)bDGalp(1-3)[Ac(1-2)]aDGalpN(1-P-P-1)Subst // Subst = undecaprenol Status: predicted in silico
Confirmation methods: Sequencing (gene, protein) ID: 3552 Notes: inverting GT, gene cluster name: KL14, PSgc11 | Organism (ID 6907): Acinetobacter baumannii D46 Full structure (ID 2075): CSDB ID(s): 485, 2292, 5846, 6738, 27747, 29556, 30618, 30929 Molecule role: CPS | |
| Enzyme name: Gtr32K14 Enzyme GenBank ID: AKC34375 CAZy family: GT2 Gene name: gtr32 Gene cluster ID: KF030679 | Synthesized dimer: bDGlcp(1-6)bDGalpN Donor (ID 34839): ?DGlcp(1-P-P-5)xXnucU Acceptor (ID 36256): Ac(1-2)bDGalpN(1-3)aDGalp(1-6)bDGalp(1-3)[Ac(1-2)]aDGalpN(1-P-P-1)Subst // Subst = undecaprenol Status: predicted in silico
Confirmation methods: Sequencing (gene, protein) ID: 3553 Notes: inverting GT, gene cluster name: KL14, PSgc11; name was augmented to make it unique | Organism (ID 6907): Acinetobacter baumannii D46 Full structure (ID 2075): CSDB ID(s): 485, 2292, 5846, 6738, 27747, 29556, 30618, 30929 Molecule role: CPS | |
| Enzyme name: AciA Enzyme GenBank ID: AIT56352 Gene name: aciA Gene cluster ID: JN107991 | Synthesized dimer: aLegp(2-?)P Donor (ID 36239): P-P-P-5)xXnucC Acceptor (ID 36257): Ac(1-5)[Ac(1-7)]aXLegp Status: predicted in silico
Confirmation methods: Sequencing (gene, protein) ID: 3554 Notes: gene cluster name: KL12 | Organism (ID 6999): Acinetobacter baumannii D36 Full structure (ID 36258): Molecule role: activated monosaccharide | Kenyon et al. 2015c DOI: 10.1093/glycob/cwv007 |
| Enzyme name: ElaB Enzyme GenBank ID: EZF12667 Gene name: elaB | Synthesized dimer: aLegp(2-?)P Donor (ID 36239): P-P-P-5)xXnucC Acceptor (ID 36257): Ac(1-5)[Ac(1-7)]aXLegp Status: predicted in silico
Confirmation methods: Sequencing (gene, protein) ID: 3555 Notes: gene cluster name: KL49 | Organism (ID 6830): Acinetobacter baumannii LAC-4 Full structure (ID 36258): Molecule role: activated monosaccharide | |
| Enzyme name: ItrB3K12 Enzyme GenBank ID: AIT56365 Gene name: itrB3 Gene cluster ID: JN107991 | Synthesized dimer: P(?-?)P Donor (ID 36259): Ac(1-2)?DFucpN(1-P-P-5)xXnucU Acceptor (ID 35735): P-1)Subst // Subst = undecaprenol Status: predicted in silico
Confirmation methods: Sequencing (gene, protein) ID: 3556 Notes: gene cluster name: KL12, phosphoglycosyltransferase; name was augmented to make it unique | Organism (ID 6999): Acinetobacter baumannii D36 Full structure (ID 36260): Molecule role: CPS | Kenyon et al. 2015c DOI: 10.1093/glycob/cwv007 Kenyon et al. 2015d DOI: 10.1093/glycob/cwv028 |
| Enzyme name: WzyK12 Enzyme GenBank ID: AIT56358 Gene name: wzy Gene cluster ID: JN107991 | Synthesized dimer: aDFucpN(1-3)aDGalpN Donor (ID 36259): Ac(1-2)?DFucpN(1-P-P-5)xXnucU Acceptor (ID 36261): -3)[Ac(1-5)[Ac(1-7)]aXAcip(2-6),Ac(1-2)]aDGalpN(1-3)[Ac(1-2)]aLFucpN(1-3)[Ac(1-2)]aDFucpN(1- Status: predicted in silico
Confirmation methods: Sequencing (gene, protein) ID: 3557 Notes: gene cluster name: KL12 | Organism (ID 6999): Acinetobacter baumannii D36 Full structure (ID 12577): CSDB ID(s): 1111, 6725, 12122 Molecule role: CPS | Kenyon et al. 2015d DOI: 10.1093/glycob/cwv028 |
| Enzyme name: Gtr31K12 Enzyme GenBank ID: AIT56363 CAZy family: GT4 Gene name: gtr31 Gene cluster ID: JN107991 | Synthesized dimer: aLFucpN(1-3)aDFucpN Donor (ID 36213): Ac(1-2)?LFucpN(1-P-P-5)xXnucU Acceptor (ID 36262): Ac(1-2)aDFucpN(1-P-P-1)Subst // Subst = undecaprenol Status: predicted in silico
Confirmation methods: Sequencing (gene, protein) ID: 3558 Notes: retaining GT, gene cluster name: KL12; name was augmented to make it unique | Organism (ID 6999): Acinetobacter baumannii D36 Full structure (ID 12577): CSDB ID(s): 1111, 6725, 12122 Molecule role: CPS | |
| Enzyme name: Gtr30K12 Enzyme GenBank ID: AIT56359 CAZy family: GT4 Gene name: gtr30 Gene cluster ID: JN107991 | Synthesized dimer: aDGalpN(1-3)aLFucpN Donor (ID 35669): Ac(1-2)?DGalpN(1-P-P-5)xXnucU Acceptor (ID 36263): Ac(1-2)aLFucpN(1-3)[Ac(1-2)]aDFucpN(1-P-P-1)Subst // Subst = undecaprenol Status: predicted in silico
Confirmation methods: Sequencing (gene, protein) ID: 3559 Notes: retaining GT, gene cluster name: KL12; name was augmented to make it unique | Organism (ID 6999): Acinetobacter baumannii D36 Full structure (ID 12577): CSDB ID(s): 1111, 6725, 12122 Molecule role: CPS | |
| Enzyme name: Gtr59K12 Enzyme GenBank ID: AIT56356 Gene name: gtr59 Gene cluster ID: JN107991 | Synthesized dimer: aAcip(2-6)aDGalpN Donor (ID 36264): Ac(1-5)[Ac(1-7)]?XAcip(2-P-5)xXnucC Acceptor (ID 36265): Ac(1-2)aDGalpN(1-3)[Ac(1-2)]aLFucpN(1-3)[Ac(1-2)]aDFucpN(1-P-P-1)Subst // Subst = undecaprenol Status: predicted in silico
Confirmation methods: Sequencing (gene, protein) ID: 3560 Notes: retaining GT, gene cluster name: KL12; name was augmented to make it unique | Organism (ID 6999): Acinetobacter baumannii D36 Full structure (ID 12577): CSDB ID(s): 1111, 6725, 12122 Molecule role: CPS | |
| Enzyme name: Gtr64 Enzyme GenBank ID: AHB32439.1 Gene name: gtr64 Gene cluster ID: KC526903 | Synthesized dimer: bDRibp(1-3)bDGalpN Acceptor (ID 36266): bDGalpN(1-P-P-1)Subst // Subst = undecaprenol Status: predicted in silico
Confirmation methods: Sequencing (gene, protein) ID: 3561 Notes: gene cluster name: KL42, PSgc22; the gene in KL42 has been annotated as gtr5 but as it transfers Rib rather than Gal, it is suggested by the author to revise its annotation to gtr64 | Organism (ID 6961): Acinetobacter baumannii LUH5550 Full structure (ID 12008): CSDB ID(s): 1364, 6700, 30671, 30945 Molecule role: CPS | Senchenkova et al. 2015 DOI: 10.1016/j.carres.2015.02.006 |
| Enzyme name: KpsS2K42 Enzyme GenBank ID: AHB32437.1 Gene name: kpsS2 Gene cluster ID: KC526903 | Synthesized dimer: aPsep(2-4)bDRibp Donor (ID 36267): lR3HOBut(1-7)[Ac(1-5)]?XPsep(2-P-5)xXnucC Acceptor (ID 36268): bDRibp(1-3)[Ac(1-2)]bDGalpN(1-P-P-1)Subst // Subst = undecaprenol Status: predicted in silico
Confirmation methods: Sequencing (gene, protein) ID: 3562 Notes: gene cluster name: KL42, PSgc22; name was augmented to make it unique | Organism (ID 6961): Acinetobacter baumannii LUH5550 Full structure (ID 12008): CSDB ID(s): 1364, 6700, 30671, 30945 Molecule role: CPS | |
| Enzyme name: ItrA2K30 Enzyme GenBank ID: ENV24273.1 Gene name: itrA2 Gene cluster ID: APPL01000041.1 | Synthesized dimer: P(?-?)P Donor (ID 35669): Ac(1-2)?DGalpN(1-P-P-5)xXnucU Acceptor (ID 35735): P-1)Subst // Subst = undecaprenol Status: predicted in silico
Confirmation methods: Sequencing (gene, protein) ID: 3563 Notes: gene cluster name: KL30 , phosphoglycosyltransferase; name was augmented to make it unique | Organism (ID 16997): Acinetobacter baumannii NIPH190 Full structure (ID 36269): Molecule role: CPS | Shashkov et al. 2015a DOI: 10.1016/j.carres.2015.09.004 |
| Enzyme name: WzyK30 Enzyme GenBank ID: ENV24276.1 Gene name: wzy Gene cluster ID: APPL01000041.1 | Synthesized dimer: bDGalpN(1-2)aDGalp Donor (ID 36270): bDGlcp(1-3)[aDGalp(1-6)aDGlcp(1-4),Ac(1-2)]aDGalpN(1-3)[Ac(1-2)]bDGalpN(1-P-P-1)Subst // Subst = undecaprenol Acceptor (ID 36271): -2)aDGalp(1-6)aDGlcp(1-4)[bDGlcp(1-3),Ac(1-2)]aDGalpN(1-3)[Ac(1-2)]bDGalpN(1- Status: predicted in silico
Confirmation methods: Sequencing (gene, protein) ID: 3564 Notes: polymerase, gene cluster name: KL30 | Organism (ID 16997): Acinetobacter baumannii NIPH190 Full structure (ID 12022): CSDB ID(s): 6736, 11795, 30676, 30948 Molecule role: CPS | |
| Enzyme name: Gtr50K30 Enzyme GenBank ID: ENV24274.1 Gene name: gtr50 Gene cluster ID: APPL01000041.1 | Synthesized dimer: aDGalpN(1-3)bDGalpN Donor (ID 35669): Ac(1-2)?DGalpN(1-P-P-5)xXnucU Acceptor (ID 36235): Ac(1-2)bDGalpN(1-P-P-1)Subst // Subst = undecaprenol Status: predicted in silico
Confirmation methods: Sequencing (gene, protein) ID: 3565 Notes: retaining GT, gene cluster name: KL30 | Organism (ID 6996): Acinetobacter baumannii NIPH 190 Full structure (ID 12022): CSDB ID(s): 6736, 11795, 30676, 30948 Molecule role: CPS | |
| Enzyme name: Gtr61 Enzyme GenBank ID: ENV24278.1 Gene name: gtr61 Gene cluster ID: APPL01000041.1 | Synthesized dimer: bDGlcp(1-3)aDGalpN Donor (ID 34839): ?DGlcp(1-P-P-5)xXnucU Acceptor (ID 36272): Ac(1-2)aDGalpN(1-3)[Ac(1-2)]bDGalpN(1-P-P-1)Subst // Subst = undecaprenol Status: predicted in silico
Confirmation methods: Sequencing (gene, protein) ID: 3566 Notes: inverting GT, gene cluster name: KL30 | Organism (ID 6996): Acinetobacter baumannii NIPH 190 Full structure (ID 12022): CSDB ID(s): 6736, 11795, 30676, 30948 Molecule role: CPS | |
| Enzyme name: Gtr63 Enzyme GenBank ID: ENV24275.1 Gene name: gtr63 Gene cluster ID: APPL01000041.1 | Synthesized dimer: aDGlcp(1-4)aDGalpN Donor (ID 34839): ?DGlcp(1-P-P-5)xXnucU Acceptor (ID 36273): bDGlcp(1-3)[Ac(1-2)]aDGalpN(1-3)[Ac(1-2)]bDGalpN(1-P-P-1)Subst // Subst = undecaprenol Status: predicted in silico
Confirmation methods: Sequencing (gene, protein) ID: 3567 Notes: retaining GT, gene cluster name: KL30 | Organism (ID 6996): Acinetobacter baumannii NIPH 190 Full structure (ID 12022): CSDB ID(s): 6736, 11795, 30676, 30948 Molecule role: CPS | |
| Enzyme name: Gtr62 Enzyme GenBank ID: ENV24277.1 Gene name: gtr62 Gene cluster ID: APPL01000041.1 | Synthesized dimer: aDGalp(1-6)aDGlcp Donor (ID 35273): ?DGalp(1-P-P-5)xXnucU Acceptor (ID 36274): bDGlcp(1-3)[aDGlcp(1-4),Ac(1-2)]aDGalpN(1-3)[Ac(1-2)]bDGalpN(1-P-P-1)Subst // Subst = undecaprenol Status: predicted in silico
Confirmation methods: Sequencing (gene, protein) ID: 3568 Notes: retaining GT, gene cluster name: KL30 | Organism (ID 6996): Acinetobacter baumannii NIPH 190 Full structure (ID 12022): CSDB ID(s): 6736, 11795, 30676, 30948 Molecule role: CPS | |
| Enzyme name: ItrA3K45 Enzyme GenBank ID: ENW33211.1 Gene name: itrA3 Gene cluster ID: APQV01000013.1 | Synthesized dimer: P(?-?)P Donor (ID 35226): Ac(1-2)?DGlcpN(1-P-P-5)xXnucU Acceptor (ID 35735): P-1)Subst // Subst = undecaprenol Status: predicted in silico
Confirmation methods: Sequencing (gene, protein) ID: 3569 Notes: gene cluster name: KL45, phosphoglycosyltransferase; name was augmented to make it unique | Organism (ID 6998): Acinetobacter baumannii NIPH 201 Full structure (ID 36275): Molecule role: CPS | |
| Enzyme name: Gtr50K45 Enzyme GenBank ID: ENW33212.1 Gene name: gtr50 Gene cluster ID: APQV01000013.1 | Synthesized dimer: aDGalpN(1-3)aDGlcpN Donor (ID 35226): Ac(1-2)?DGlcpN(1-P-P-5)xXnucU Acceptor (ID 35643): Ac(1-2)aDGlcpN(1-P-P-1)Subst // Subst = undecaprenol Status: predicted in silico
Confirmation methods: Sequencing (gene, protein) ID: 3570 Notes: retaining GT, gene cluster name: KL45 | Organism (ID 6998): Acinetobacter baumannii NIPH 201 Full structure (ID 12025): CSDB ID(s): 6716, 11793, 30879, 30950 Molecule role: CPS | |
| Enzyme name: Gtr89 Enzyme GenBank ID: ENW33216.1 Gene name: gtr89 Gene cluster ID: APQV01000013.1 | Synthesized dimer: bDGlcp(1-3)aDGalpN Donor (ID 34839): ?DGlcp(1-P-P-5)xXnucU Acceptor (ID 36276): Ac(1-2)aDGalpN(1-3)[Ac(1-2)]aDGlcpN(1-P-P-1)Subst // Subst = undecaprenol Status: predicted in silico
Confirmation methods: Sequencing (gene, protein) ID: 3571 Notes: inverting GT, gene cluster name: KL45 | Organism (ID 6998): Acinetobacter baumannii NIPH 201 Full structure (ID 12025): CSDB ID(s): 6716, 11793, 30879, 30950 Molecule role: CPS | |
| Enzyme name: Gtr93 Enzyme GenBank ID: ENW33213.1 Gene name: gtr93 Gene cluster ID: APQV01000013.1 | Synthesized dimer: aDGalpN(1-4)aDGalpN Donor (ID 35669): Ac(1-2)?DGalpN(1-P-P-5)xXnucU Acceptor (ID 36277): bDGlcp(1-3)[Ac(1-2)]aDGalpN(1-3)[Ac(1-2)]aDGlcpN(1-P-P-1)Subst // Subst = undecaprenol Status: predicted in silico
Confirmation methods: Sequencing (gene, protein) ID: 3572 Notes: retaining GT, gene cluster name: KL45 | Organism (ID 6998): Acinetobacter baumannii NIPH 201 Full structure (ID 12025): CSDB ID(s): 6716, 11793, 30879, 30950 Molecule role: CPS | |
| Enzyme name: Atr13 Enzyme GenBank ID: QHB12896.1 Gene name: atr13 Gene cluster ID: APQV01000013.1 | Synthesized dimer: Ac(1-6)aDGalpN Acceptor (ID 36278): bDGlcp(1-3)[Ac(1-2)aDGalpN(1-4),Ac(1-2)]aDGalpN(1-3)[Ac(1-2)]aDGlcpN(1-P-P-1)Subst // Subst = undecaprenol Status: predicted in silico
Confirmation methods: Sequencing (gene, protein) ID: 3573 Notes: gene cluster name: KL45, acetyltransferase | Organism (ID 6998): Acinetobacter baumannii NIPH 201 Full structure (ID 12025): CSDB ID(s): 6716, 11793, 30879, 30950 Molecule role: CPS | |
| Enzyme name: ItrA3K48 Enzyme GenBank ID: ENU71477.1 Gene name: itrA3 Gene cluster ID: APOV01000005.1 | Synthesized dimer: P(?-?)P Donor (ID 35226): Ac(1-2)?DGlcpN(1-P-P-5)xXnucU Acceptor (ID 35735): P-1)Subst // Subst = undecaprenol Status: predicted in silico
Confirmation methods: Sequencing (gene, protein) ID: 3574 Notes: gene cluster name: KL48 , phosphoglycosyltransferase; name was augmented to make it unique | Organism (ID 6997): Acinetobacter baumannii NIPH 615 Full structure (ID 36279): Molecule role: CPS | |
| Enzyme name: Gtr99 Enzyme GenBank ID: ENU71478.1 Gene name: gtr99 Gene cluster ID: APOV01000005.1 | Synthesized dimer: aDGalp(1-3)bDGlcpN Donor (ID 35273): ?DGalp(1-P-P-5)xXnucU Acceptor (ID 36280): Ac(1-2)bDGlcpN(1-P-P-1)Subst // Subst = undecaprenol Status: predicted in silico
Confirmation methods: Sequencing (gene, protein) ID: 3575 Notes: retaining GT, gene cluster name: KL48 | Organism (ID 6997): Acinetobacter baumannii NIPH 615 Full structure (ID 12023): CSDB ID(s): 6737, 9731, 11794, 30877, 30949 Molecule role: CPS | |
| Enzyme name: Gtr95K48 Enzyme GenBank ID: ENU71482.1 Gene name: gtr95 Gene cluster ID: APOV01000005.1 | Synthesized dimer: bDGlcp(1-3)aDGalp Donor (ID 34839): ?DGlcp(1-P-P-5)xXnucU Acceptor (ID 36281): aDGalp(1-3)[Ac(1-2)]bDGlcpN(1-P-P-1)Subst // Subst = undecaprenol Status: predicted in silico
Confirmation methods: Sequencing (gene, protein) ID: 3576 Notes: inverting GT, gene cluster name: KL48; name was augmented to make it unique | Organism (ID 6997): Acinetobacter baumannii NIPH 615 Full structure (ID 12023): CSDB ID(s): 6737, 9731, 11794, 30877, 30949 Molecule role: CPS | |
| Enzyme name: Gtr98 Enzyme GenBank ID: ENU71479.1 Gene name: gtr98 Gene cluster ID: APOV01000005.1 | Synthesized dimer: aDGlcpN(1-4)aDGalp Donor (ID 35226): Ac(1-2)?DGlcpN(1-P-P-5)xXnucU Acceptor (ID 36282): bDGlcp(1-3)aDGalp(1-3)[Ac(1-2)]bDGlcpN(1-P-P-1)Subst // Subst = undecaprenol Status: predicted in silico
Confirmation methods: Sequencing (gene, protein) ID: 3577 Notes: retaining GT, gene cluster name: Kl48 | Organism (ID 6997): Acinetobacter baumannii NIPH 615 Full structure (ID 12023): CSDB ID(s): 6737, 9731, 11794, 30877, 30949 Molecule role: CPS | |
| Enzyme name: Gtr97 Enzyme GenBank ID: ENU71481.1 Gene name: gtr97 Gene cluster ID: APOV01000005.1 | Synthesized dimer: aDGlcp(1-6)aDGlcpN Donor (ID 35720): Ac(1-2)?DGlcp(1-P-P-5)xXnucU Acceptor (ID 36283): bDGlcp(1-3)[Ac(1-2)aDGlcpN(1-4)]aDGalp(1-3)[Ac(1-2)]bDGlcpN(1-P-P-1)Subst // Subst = undecaprenol Status: predicted in silico
Confirmation methods: Sequencing (gene, protein) ID: 3578 Notes: retaining GT, gene cluster name: KL48 | Organism (ID 6997): Acinetobacter baumannii NIPH 615 Full structure (ID 12023): CSDB ID(s): 6737, 9731, 11794, 30877, 30949 Molecule role: CPS | |
| Enzyme name: ItrA2 Enzyme GenBank ID: ABO10556.2* Gene name: itrA2 | Synthesized dimer: P(?-?)P Donor (ID 35669): Ac(1-2)?DGalpN(1-P-P-5)xXnucU Acceptor (ID 35735): P-1)Subst // Subst = undecaprenol Status: predicted in silico
Confirmation methods: Sequencing (gene, protein) ID: 3579 Notes: phosphoglycosyltransferase; name was augmented to make it unique | Organism (ID 5039): Acinetobacter baumannii ATCC 17978 Full structure (ID 36269): Molecule role: CPS | |
| Enzyme name: Gtr5K33 Enzyme GenBank ID: QHB12990.1 Gene name: gtr5 | Synthesized dimer: bDGalp(1-4)aDGalpN Donor (ID 35273): ?DGalp(1-P-P-5)xXnucU Acceptor (ID 36284): Ac(1-2)aDGalpN Status: predicted in silico
Confirmation methods: Sequencing (gene, protein) ID: 3580 Notes: gene cluster name: KL33 | Organism (ID 16998): Acinetobacter baumannii NIPH 67 Full structure (ID 36285): Molecule role: CPS | Arbatsky et al. 2016 DOI: 10.1007/s11172-016-1342-y |
| Enzyme name: KpsS2K33 Enzyme GenBank ID: QHB12988.1 Gene name: kpsS2 | Synthesized dimer: aPsep(2-6)bDGalp Donor (ID 36237): Ac(1-5)[Ac(1-7)]?XPsep(2-P-5)xXnucC Acceptor (ID 36286): bDGalp(1-4)[Ac(1-2)]aDGalpN Status: predicted in silico
Confirmation methods: Sequencing (gene, protein) ID: 3581 Notes: retaining GT, gene cluster name: KL33; name was augmented to make it unique | Organism (ID 16998): Acinetobacter baumannii NIPH 67 Full structure (ID 36285): Molecule role: CPS | |
| Enzyme name: Gtr2K1 Enzyme GenBank ID: AJF80036.1 Gene name: gtr2 Gene cluster ID: CP010781.1 | Synthesized dimer: aDGalpNA(1-3)bDQuipN4N Donor (ID 36216): Ac(1-2)?DGalpNA(1-P-P-5)xXnucU Acceptor (ID 36287): <<50%lR3HOBut(1-4)|50%Ac(1-4)>>bDQuipN4N(1-P-P-1)Subst // Subst = undecaprenol Status: predicted in silico
Confirmation methods: Sequencing (gene, protein) ID: 3582 Notes: gene cluster name: KL1; name was augmented to make it unique | Organism (ID 6514,16999,17000,17001): Acinetobacter baumannii AYE, AB307-0294, A1, LUH5542 Full structure (ID 786): CSDB ID(s): 2301, 5534, 6730, 8448, 12787, 12947, 27755, 29336 Molecule role: CPS | Kenyon et al. 2016a DOI: 10.1016/j.carres.2016.07.016 |
| Enzyme name: Wzy Enzyme GenBank ID: AGK44883.1 Gene name: wzy Gene cluster ID: CP001182.1 | Synthesized dimer: aDQuipN(1-4)aDGalpN Donor (ID 36288): xRPyr(2-4:2-6)[Ac(1-2)]aDGalpN(1-6)[Ac(1-2)]aDGalpN(1-4)[Ac(1-2)]aDGalpNA(1-3)[Ac(1-2)]aDQuipN(1-P-P-1)Subst // Subst = undecaprenol Acceptor (ID 36289): -4)[xRPyr(2-4:2-6)[Ac(1-2)]aDGalpN(1-6),Ac(1-2)]aDGalpN(1-4)[Ac(1-2)]aDGalpNA(1-3)[Ac(1-2)]aDQuipN(1- Status: predicted in silico
Confirmation methods: Sequencing (gene, protein) ID: 3583 Notes: gene cluster name: KL4 | Organism (ID 9514,17002,17003): Acinetobacter baumannii D78, AB0057, D81 Exact full structure is unknown Molecule role: CPS | |
| Enzyme name: Gtr12KL4 Enzyme GenBank ID: AGK44885.1 CAZy family: GT4 Gene name: gtr12 Gene cluster ID: CP001182.1 | Synthesized dimer: aDGalpNA(1-3)aDQuipN Donor (ID 36216): Ac(1-2)?DGalpNA(1-P-P-5)xXnucU Acceptor (ID 36290): Ac(1-2)aDQuipN(1-P-P-1)Subst // Subst = undecaprenol Status: predicted in silico
Confirmation methods: Sequencing (gene, protein) ID: 3584 Notes: retaining GT, gene cluster name: KL4; name was augmented to make it unique | Organism (ID 9514,17002,17003): Acinetobacter baumannii D78, AB0057, D81 Exact full structure is unknown Molecule role: CPS | |
| Enzyme name: Gtr11 Enzyme GenBank ID: AGK44884.1 CAZy family: GT4 Gene name: gtr11 Gene cluster ID: CP001182.1 | Synthesized dimer: aDGalpN(1-4)aDGalpNA Donor (ID 35669): Ac(1-2)?DGalpN(1-P-P-5)xXnucU Acceptor (ID 36291): Ac(1-2)aDGalpNA(1-3)[Ac(1-2)]aDQuipN(1-P-P-1)Subst // Subst = undecaprenol Status: predicted in silico
Confirmation methods: Sequencing (gene, protein) ID: 3585 Notes: retaining GT, gene cluster name: KL4 | Organism (ID 9514,17002,17003): Acinetobacter baumannii D78, AB0057, D81 Exact full structure is unknown Molecule role: CPS | |
| Enzyme name: Gtr10 Enzyme GenBank ID: AGK44882.1 CAZy family: GT4 Gene name: gtr10 Gene cluster ID: CP001182.1 | Synthesized dimer: aDGalpN(1-6)aDGalpN Donor (ID 35669): Ac(1-2)?DGalpN(1-P-P-5)xXnucU Acceptor (ID 36292): Ac(1-2)aDGalpN(1-4)[Ac(1-2)]aDGalpNA(1-3)[Ac(1-2)]aDQuipN(1-P-P-1)Subst // Subst = undecaprenol Status: predicted in silico
Confirmation methods: Sequencing (gene, protein) ID: 3586 Notes: retaining GT, gene cluster name: KL4 | Organism (ID 9514,17002,17003): Acinetobacter baumannii D78, AB0057, D81 Exact full structure is unknown Molecule role: CPS | |
| Enzyme name: Ptr1K4 Enzyme GenBank ID: AGK44881.1 Gene name: ptr1 Gene cluster ID: CP001182.1 | Synthesized dimer: RPyr(2-4)aDGalpN Acceptor (ID 36293): Ac(1-2)aDGalpN(1-6)[Ac(1-2)]aDGalpN(1-4)[Ac(1-2)]aDGalpNA(1-3)[Ac(1-2)]aDQuipN(1-P-P-1)Subst // Subst = undecaprenol Status: predicted in silico
Confirmation methods: Sequencing (gene, protein) ID: 3587 Notes: not known if the pyruvate is added to the D-GalpNAc before or after it is incorporated into the tetramer, retaining GT, gene cluster name: KL4; name was augmented to make it unique | Organism (ID 9514,17002,17003): Acinetobacter baumannii D78, AB0057, D81 Exact full structure is unknown Molecule role: CPS | |
| Enzyme name: ItrA1 (WeeH) Enzyme GenBank ID: CAM88568.1 Gene name: itrA1 Gene cluster ID: CP010781.1 | Synthesized dimer: P(?-?)P Donor (ID 36294): Ac(1-2)[Ac(1-4)]?DQuipN(1-P-P-5)xXnucU Acceptor (ID 35735): P-1)Subst // Subst = undecaprenol Status: predicted in silico
Confirmation methods: Sequencing (gene, protein) ID: 3588 Notes: gene cluster name: KL1, PSgc13; phosphoglycosyltransferase | Organism (ID 6514,16999,17000,17001): Acinetobacter baumannii AYE, AB307-0294, A1, LUH5542 Full structure (ID 36295): Molecule role: CPS | Kenyon et al. 2016b DOI: 10.1099/mic.0.000313 |
| Enzyme name: WzyK1 Enzyme GenBank ID: AJF80034.1 Gene name: WzyK1 Gene cluster ID: CP010781.1 | Synthesized dimer: bDQuipN4N(1-4)aDGlcpN Donor (ID 36296): Ac(1-2)[75%Ac(1-6)]aDGlcpN(1-4)[Ac(1-2)]aDGalpNA(1-3)[<<50%lS3HOBut(1-4)|50%Ac(1-4)>>]bDQuipN4N(1-P-P-1)Subst // Subst = undecaprenol Acceptor (ID 36297): -4)[75%Ac(1-6),Ac(1-2)]aDGlcpN(1-4)[Ac(1-2)]aDGalpNA(1-3)[<<50%lS3HOBut(1-4)|50%Ac(1-4)>>]bDQuipN4N(1- Status: predicted in silico
Confirmation methods: Sequencing (gene, protein) ID: 3589 Notes: gene cluster name: KL1, PSgc13 | Organism (ID 6514,16999,17000,17001): Acinetobacter baumannii AYE, AB307-0294, A1, LUH5542 Full structure (ID 786): CSDB ID(s): 2301, 5534, 6730, 8448, 12787, 12947, 27755, 29336 Molecule role: CPS | |
| Enzyme name: QhbA Enzyme GenBank ID: DAA64737.1 Gene name: qhbA Gene cluster ID: CP010781.1 | Synthesized dimer: S3HOBut(1-4)bDQuipN4N Acceptor (ID 36298): bDQuipN4N(1-P-P-1)Subst // Subst = undecaprenol Status: predicted in silico
Confirmation methods: Sequencing (gene, protein) ID: 3590 Notes: gene cluster name: KL1, PSgc13 | Organism (ID 6514,16999,17000,17001): Acinetobacter baumannii AYE, AB307-0294, A1, LUH5542 Full structure (ID 786): CSDB ID(s): 2301, 5534, 6730, 8448, 12787, 12947, 27755, 29336 Molecule role: CPS | |
| Enzyme name: Gtr1 Enzyme GenBank ID: AJF80033.1 Gene name: gtr1 Gene cluster ID: CP010781.1 | Synthesized dimer: aDGlcpN(1-4)aDGalpNA Donor (ID 35226): Ac(1-2)?DGlcpN(1-P-P-5)xXnucU Acceptor (ID 36299): Ac(1-2)aDGalpNA(1-3)[<<50%lS3HOBut(1-4)|50%Ac(1-4)>>]bDQuipN4N(1-P-P-1)Subst // Subst = undecaprenol Status: predicted in silico
Confirmation methods: Sequencing (gene, protein) ID: 3591 Notes: gene cluster name: KL1, PSgc13 | Organism (ID 6514,16999,17000,17001): Acinetobacter baumannii AYE, AB307-0294, A1, LUH5542 Full structure (ID 786): CSDB ID(s): 2301, 5534, 6730, 8448, 12787, 12947, 27755, 29336 Molecule role: CPS | |
| Enzyme name: WzyGI Enzyme GenBank ID: ALV86836.1 Gene name: wzyGI Gene cluster ID: KU165787 | Synthesized dimer: bDQuipN4N(1-3)aDGalpN Donor (ID 36300): Ac(1-2)[25%Ac(1-6)]aDGalpN(1-4)[Ac(1-2)]aDGalpNA(1-3)bDQuipN4N(1-P-P-1)Subst // Subst = undecaprenol Acceptor (ID 36301): -3)[25%Ac(1-6),Ac(1-2)]aDGalpN(1-4)[Ac(1-2)]aDGalpNA(1-3)[Ac(1-4)]bDQuipN4N(1- Status: predicted in silico
Confirmation methods: Sequencing (gene, protein) ID: 3592 Notes: gene cluster name: KL19 | Organism (ID 8857,17004): Acinetobacter baumannii 28, RBH2 Full structure (ID 12337): CSDB ID(s): 5052, 6729, 11644 Molecule role: CPS | |
| Enzyme name: ItrA1K19 Enzyme GenBank ID: ALV86826.1 Gene name: itrA1 Gene cluster ID: KU165787 | Synthesized dimer: P(?-?)P Donor (ID 36294): Ac(1-2)[Ac(1-4)]?DQuipN(1-P-P-5)xXnucU Acceptor (ID 35735): P-1)Subst // Subst = undecaprenol Status: predicted in silico
Confirmation methods: Sequencing (gene, protein) ID: 3593 Notes: gene cluster name: KL19 , phosphoglycosyltransferase; name was augmented to make it unique | Organism (ID 8857,17004): Acinetobacter baumannii 28, RBH2 Full structure (ID 36302): Molecule role: CPS | |
| Enzyme name: Gtr2K19 Enzyme GenBank ID: ALV86825.1 Gene name: gtr2 Gene cluster ID: KU165787 | Synthesized dimer: aDGalpNA(1-3)bDQuipN4N Donor (ID 36216): Ac(1-2)?DGalpNA(1-P-P-5)xXnucU Acceptor (ID 36298): bDQuipN4N(1-P-P-1)Subst // Subst = undecaprenol Status: predicted in silico
Confirmation methods: Sequencing (gene, protein) ID: 3594 Notes: gene cluster name: KL19; name was augmented to make it unique | Organism (ID 8857,17004): Acinetobacter baumannii 28, RBH2 Full structure (ID 12337): CSDB ID(s): 5052, 6729, 11644 Molecule role: CPS | |
| Enzyme name: Gtr41 Enzyme GenBank ID: ALV86824.1 Gene name: gtr41 Gene cluster ID: KU165787 | Synthesized dimer: aDGalpN(1-4)aDGalpNA Donor (ID 35669): Ac(1-2)?DGalpN(1-P-P-5)xXnucU Acceptor (ID 36303): Ac(1-2)aDGalpNA(1-3)bDQuipN4N(1-P-P-1)Subst // Subst = undecaprenol Status: predicted in silico
Confirmation methods: Sequencing (gene, protein) ID: 3595 Notes: gene cluster name: KL19 | Organism (ID 8857,17004): Acinetobacter baumannii 28, RBH2 Full structure (ID 12337): CSDB ID(s): 5052, 6729, 11644 Molecule role: CPS | |
| Enzyme name: Atr25 Enzyme GenBank ID: EKL59360.1 Gene name: atr25 Gene cluster ID: KU165787 | Synthesized dimer: Ac(1-6)aDGalpN Acceptor (ID 36304): Ac(1-2)aDGalpN(1-4)[Ac(1-2)]aDGalpNA(1-3)[Ac(1-4)]bDQuipN4N(1-P-P-1)Subst // Subst = undecaprenol Status: predicted in silico
Confirmation methods: Sequencing (gene, protein) ID: 3596 Notes: gene cluster name: KL19, acetyltransferase | Organism (ID 17004): Acinetobacter baumannii RBH2 Full structure (ID 12337): CSDB ID(s): 5052, 6729, 11644 Molecule role: CPS | |
| Enzyme name: QhbC Enzyme GenBank ID: ALV86827.1 Gene name: qhbC Gene cluster ID: KU165787 | Synthesized dimer: Ac(1-6)aDGalpN Acceptor (ID 36304): Ac(1-2)aDGalpN(1-4)[Ac(1-2)]aDGalpNA(1-3)[Ac(1-4)]bDQuipN4N(1-P-P-1)Subst // Subst = undecaprenol Status: predicted in silico
Confirmation methods: Sequencing (gene, protein) ID: 3597 Notes: gene cluster name: KL19, acetyltransferase | Organism (ID 8857,17004): Acinetobacter baumannii 28, RBH2 Full structure (ID 12337): CSDB ID(s): 5052, 6729, 11644 Molecule role: CPS | |
| Enzyme name: ItrA3K43 Enzyme GenBank ID: QHB12933.1 Gene name: itrA3 | Synthesized dimer: P(?-?)P Donor (ID 35226): Ac(1-2)?DGlcpN(1-P-P-5)xXnucU Acceptor (ID 35735): P-1)Subst // Subst = undecaprenol Status: predicted in silico
Confirmation methods: Sequencing (gene, protein) ID: 3598 Notes: gene cluster name: KL43, PSgc15; phosphoglycosyltransferase; name was augmented to make it unique | Organism (ID 7207,17005,17006): Acinetobacter baumannii LUH5544, NIPH 60, O15 Full structure (ID 36305): Molecule role: CPS | Shashkov et al. 2016a DOI: 10.1016/j.carres.2016.10.007 |
| Enzyme name: WzyK43 Enzyme GenBank ID: QHB12930.1 Gene name: wzy | Synthesized dimer: aDGlcpN(1-6)aDGlcpN Donor (ID 35226): Ac(1-2)?DGlcpN(1-P-P-5)xXnucU Acceptor (ID 36306): bDGlcp(1-3)[Ac(1-2)aDGlcpN(1-4),Ac(1-2)]aDGalpN(1-3)[Ac(1-2)]aDGlcpN(1-P-P-1)Subst // Subst = undecaprenol Status: predicted in silico
Confirmation methods: Sequencing (gene, protein) ID: 3599 Notes: gene cluster name: KL43, PSgc15 | Organism (ID 7207,17005,17006): Acinetobacter baumannii LUH5544, NIPH 60, O15 Full structure (ID 2076): CSDB ID(s): 486, 6715, 11361, 27749, 29558, 30931 Molecule role: CPS | |
| Enzyme name: Gtr50K43 Enzyme GenBank ID: QHB12932.1 Gene name: gtr50 | Synthesized dimer: aDGalpN(1-3)aDGlcpN Donor (ID 35669): Ac(1-2)?DGalpN(1-P-P-5)xXnucU Acceptor (ID 35643): Ac(1-2)aDGlcpN(1-P-P-1)Subst // Subst = undecaprenol Status: predicted in silico
Confirmation methods: Sequencing (gene, protein) ID: 3600 Notes: retaining GT, gene cluster name: KL43, PSgc15; name was augmented to make it unique | Organism (ID 7207,17005,17006): Acinetobacter baumannii LUH5544, NIPH 60, O15 Full structure (ID 2076): CSDB ID(s): 486, 6715, 11361, 27749, 29558, 30931 Molecule role: CPS | |
| Enzyme name: Gtr49K43 Enzyme GenBank ID: QHB12931.1 Gene name: gtr49 | Synthesized dimer: aDGlcpN(1-4)aDGalpN Donor (ID 35226): Ac(1-2)?DGlcpN(1-P-P-5)xXnucU Acceptor (ID 36276): Ac(1-2)aDGalpN(1-3)[Ac(1-2)]aDGlcpN(1-P-P-1)Subst // Subst = undecaprenol Status: predicted in silico
Confirmation methods: Sequencing (gene, protein) ID: 3601 Notes: retaining GT, gene cluster name: KL43, PSgc15; name was augmented to make it unique | Organism (ID 7207,17005,17006): Acinetobacter baumannii LUH5544, NIPH 60, O15 Full structure (ID 2076): CSDB ID(s): 486, 6715, 11361, 27749, 29558, 30931 Molecule role: CPS | |
| Enzyme name: Gtr88 Enzyme GenBank ID: ENV28484.1 Gene name: gtr88 | Synthesized dimer: bDGlcp(1-3)aDGalpN Donor (ID 34839): ?DGlcp(1-P-P-5)xXnucU Acceptor (ID 36276): Ac(1-2)aDGalpN(1-3)[Ac(1-2)]aDGlcpN(1-P-P-1)Subst // Subst = undecaprenol Status: predicted in silico
Confirmation methods: Sequencing (gene, protein) ID: 3602 Notes: inverting GT, gene cluster name: KL43, PSgc15 | Organism (ID 7207,17005,17006): Acinetobacter baumannii LUH5544, NIPH 60, O15 Full structure (ID 2076): CSDB ID(s): 486, 6715, 11361, 27749, 29558, 30931 Molecule role: CPS | |
| Enzyme name: WzyK47 Enzyme GenBank ID: QHB12947.1 Gene name: wzy | Synthesized dimer: aDGlcpN(1-6)aDGlcpN Donor (ID 35226): Ac(1-2)?DGlcpN(1-P-P-5)xXnucU Acceptor (ID 36307): bDGlcp(1-3)[Ac(1-2)aDGlcpN(1-6)[Ac(1-2)]aDGlcpN(1-4),Ac(1-2)]aDGalpN(1-3)[Ac(1-2)]aDGlcpN(1-P-P-1)Subst // Subst = undecaprenol Status: predicted in silico
Confirmation methods: Sequencing (gene, protein) ID: 3603 Notes: gene cluster name: KL47 | Organism (ID 17007): Acinetobacter baumannii NIPH 601 Full structure (ID 14643): CSDB ID(s): 6741, 10940, 11791 Molecule role: CPS | |
| Enzyme name: ItrA3K47 Enzyme GenBank ID: QHB12950.1 Gene name: itrA3 | Synthesized dimer: P(?-?)P Donor (ID 35226): Ac(1-2)?DGlcpN(1-P-P-5)xXnucU Acceptor (ID 35735): P-1)Subst // Subst = undecaprenol Status: predicted in silico
Confirmation methods: Sequencing (gene, protein) ID: 3604 Notes: gene cluster name: KL47, phosphoglycosyltransferase; name was augmented to make it unique | Organism (ID 17007): Acinetobacter baumannii NIPH 601 Exact full structure is unknown Molecule role: CPS | |
| Enzyme name: Gtr50K47 Enzyme GenBank ID: QHB12949.1 Gene name: gtr50 | Synthesized dimer: aDGalpN(1-3)aDGlcpN Donor (ID 35669): Ac(1-2)?DGalpN(1-P-P-5)xXnucU Acceptor (ID 35643): Ac(1-2)aDGlcpN(1-P-P-1)Subst // Subst = undecaprenol Status: predicted in silico
Confirmation methods: Sequencing (gene, protein) ID: 3605 Notes: retaining GT, gene cluster name: KL47; name was augmented to make it unique | Organism (ID 17007): Acinetobacter baumannii NIPH 601 Full structure (ID 14643): CSDB ID(s): 6741, 10940, 11791 Molecule role: CPS | |
| Enzyme name: Gtr49K47 Enzyme GenBank ID: QHB12948.1 Gene name: gtr49 | Synthesized dimer: aDGlcpN(1-4)aDGalpN Donor (ID 35226): Ac(1-2)?DGlcpN(1-P-P-5)xXnucU Acceptor (ID 36276): Ac(1-2)aDGalpN(1-3)[Ac(1-2)]aDGlcpN(1-P-P-1)Subst // Subst = undecaprenol Status: predicted in silico
Confirmation methods: Sequencing (gene, protein) ID: 3606 Notes: retaining GT, gene cluster name: KL47; name was augmented to make it unique | Organism (ID 17007): Acinetobacter baumannii NIPH 601 Full structure (ID 14643): CSDB ID(s): 6741, 10940, 11791 Molecule role: CPS | |
| Enzyme name: Gtr95K47 Enzyme GenBank ID: ENW49799.1 Gene name: gtr95 | Synthesized dimer: bDGlcp(1-3)aDGalpN Donor (ID 34839): ?DGlcp(1-P-P-5)xXnucU Acceptor (ID 36276): Ac(1-2)aDGalpN(1-3)[Ac(1-2)]aDGlcpN(1-P-P-1)Subst // Subst = undecaprenol Status: predicted in silico
Confirmation methods: Sequencing (gene, protein) ID: 3607 Notes: inverting GT, gene cluster name: Kl47; name was augmented to make it unique | Organism (ID 17007): Acinetobacter baumannii NIPH 601 Full structure (ID 14643): CSDB ID(s): 6741, 10940, 11791 Molecule role: CPS | |
| Enzyme name: Gtr96 Enzyme GenBank ID: APB03005.1 Gene name: gtr96 | Synthesized dimer: aDGlcpN(1-6)aDGlcpN Donor (ID 35226): Ac(1-2)?DGlcpN(1-P-P-5)xXnucU Acceptor (ID 36308): Ac(1-2)aDGlcpN(1-4)[Ac(1-2)]aDGalpN(1-3)[Ac(1-2)]aDGlcpN(1-P-P-1)Subst // Subst = undecaprenol Status: predicted in silico
Confirmation methods: Sequencing (gene, protein) ID: 3608 Notes: retaining GT, gene cluster name: KL47 | Organism (ID 17007): Acinetobacter baumannii NIPH 601 Full structure (ID 14643): CSDB ID(s): 6741, 10940, 11791 Molecule role: CPS | |
| Enzyme name: ItrA3K88 Enzyme GenBank ID: AHB32611.2 Gene name: itrA3 | Synthesized dimer: P(?-?)P Donor (ID 35226): Ac(1-2)?DGlcpN(1-P-P-5)xXnucU Acceptor (ID 35735): P-1)Subst // Subst = undecaprenol Status: predicted in silico
Confirmation methods: Sequencing (gene, protein) ID: 3609 Notes: gene cluster name: KL88, PSgc20; phosphoglycosyltransferase; name was augmented to make it unique | Organism (ID 17008): Acinetobacter baumannii LUH5548 Full structure (ID 36309): Molecule role: CPS | |
| Enzyme name: WzyK88 Enzyme GenBank ID: AHB32614.2 Gene name: wzy | Synthesized dimer: bDGlcpN(1-2)bDGlcp Donor (ID 36310): bDGlcp(1-6)[Ac(1-2)]aDGlcpN(1-6)[Ac(1-2)]aDGlcpN(1-4)[Ac(1-2)]aDGalpN(1-3)[Ac(1-2)]bDGlcpN(1-P-P-1)Subst // Subst = undecaprenol Acceptor (ID 36311): -2)bDGlcp(1-6)[Ac(1-2)]aDGlcpN(1-6)[Ac(1-2)]aDGlcpN(1-4)[Ac(1-2)]aDGalpN(1-3)[Ac(1-2)]bDGlcpN(1- Status: predicted in silico
Confirmation methods: Sequencing (gene, protein) ID: 3610 Notes: gene cluster name: KL88, PSgc20 | Organism (ID 17008): Acinetobacter baumannii LUH5548 Full structure (ID 12445): CSDB ID(s): 6753, 11792 Molecule role: CPS | |
| Enzyme name: Gtr50K88 Enzyme GenBank ID: AHB32612.1 Gene name: gtr50 | Synthesized dimer: aDGalpN(1-3)bDGlcpN Donor (ID 35669): Ac(1-2)?DGalpN(1-P-P-5)xXnucU Acceptor (ID 36280): Ac(1-2)bDGlcpN(1-P-P-1)Subst // Subst = undecaprenol Status: predicted in silico
Confirmation methods: Sequencing (gene, protein) ID: 3611 Notes: gene cluster name: KL88, PSgc20; name was augmented to make it unique | Organism (ID 17008): Acinetobacter baumannii LUH5548 Full structure (ID 12445): CSDB ID(s): 6753, 11792 Molecule role: CPS | |
| Enzyme name: Gtr49K88 Enzyme GenBank ID: AHB32613.1 Gene name: gtr49 | Synthesized dimer: aDGlcpN(1-4)aDGalpN Donor (ID 35226): Ac(1-2)?DGlcpN(1-P-P-5)xXnucU Acceptor (ID 36312): Ac(1-2)aDGalpN(1-3)[Ac(1-2)]bDGlcpN(1-P-P-1)Subst // Subst = undecaprenol Status: predicted in silico
Confirmation methods: Sequencing (gene, protein) ID: 3612 Notes: gene cluster name: KL88, PSgc20; name was augmented to make it unique | Organism (ID 17008): Acinetobacter baumannii LUH5548 Full structure (ID 12445): CSDB ID(s): 6753, 11792 Molecule role: CPS | |
| Enzyme name: Gtr161 Enzyme GenBank ID: AHB32615.1 Gene name: gtr161 | Synthesized dimer: aDGlcpN(1-6)aDGlcpN Donor (ID 35226): Ac(1-2)?DGlcpN(1-P-P-5)xXnucU Acceptor (ID 36313): Ac(1-2)aDGlcpN(1-4)[Ac(1-2)]aDGalpN(1-3)[Ac(1-2)]bDGlcpN(1-P-P-1)Subst // Subst = undecaprenol Status: predicted in silico
Confirmation methods: Sequencing (gene, protein) ID: 3613 Notes: gene cluster name: KL88, PSgc20 | Organism (ID 17008): Acinetobacter baumannii LUH5548 Full structure (ID 12445): CSDB ID(s): 6753, 11792 Molecule role: CPS | |
| Enzyme name: Gtr160 Enzyme GenBank ID: AHB32616.1 Gene name: gtr160 | Synthesized dimer: bDGlcp(1-6)aDGlcpN Donor (ID 34839): ?DGlcp(1-P-P-5)xXnucU Acceptor (ID 36314): Ac(1-2)aDGlcpN(1-6)[Ac(1-2)]aDGlcpN(1-4)[Ac(1-2)]aDGalpN(1-3)[Ac(1-2)]bDGlcpN(1-P-P-1)Subst // Subst = undecaprenol Status: predicted in silico
Confirmation methods: Sequencing (gene, protein) ID: 3614 Notes: gene cluster name: KL88, PSgc20 | Organism (ID 17008): Acinetobacter baumannii LUH5548 Full structure (ID 12445): CSDB ID(s): 6753, 11792 Molecule role: CPS | |
| Enzyme name: ItrA2K27 Enzyme GenBank ID: ALL34868.1 Gene name: itrA2 | Synthesized dimer: P(?-?)P Donor (ID 35669): Ac(1-2)?DGalpN(1-P-P-5)xXnucU Acceptor (ID 35735): P-1)Subst // Subst = undecaprenol Status: predicted in silico
Confirmation methods: Sequencing (gene, protein) ID: 3615 Notes: gene cluster name: KL27, phosphoglycosyltransferase; name was augmented to make it unique | Organism (ID 7098,17009): Acinetobacter baumannii 1432, 4190 Full structure (ID 36315): Molecule role: CPS | Lees-Miller et al. 2013 DOI: 10.1111/mmi.12300 Shashkov et al. 2016b DOI: 10.1093/glycob/cwv168 |
| Enzyme name: WzyK27 Enzyme GenBank ID: ALL34864.1 Gene name: wzyK27 Gene cluster ID: KT266827 | Synthesized dimer: bDGalpN(1-4)bDGalp Donor (ID 36316): Ac(1-2)aDGlcpN(1-3)[Ac(1-5)[<<70%lS3HOBut(1-7)|30%Ac(1-7)>>]aXLegp(2-6)bDGalp(1-6)]bDGalp(1-3)[Ac(1-2)]bDGalpN(1-P-P-1)Subst // Subst = undecaprenol Acceptor (ID 36317): -4)[Ac(1-5)[<<70%lS3HOBut(1-7)|30%Ac(1-7)>>]aXLegp(2-6)]bDGalp(1-6)[Ac(1-2)aDGlcpN(1-3)]bDGalp(1-3)[Ac(1-2)]bDGalpN(1- Status: predicted in silico
Confirmation methods: Sequencing (gene, protein) ID: 3616 Notes: gene cluster name: KL27 | Organism (ID 7098,17009): Acinetobacter baumannii 1432, 4190 Full structure (ID 12246): CSDB ID(s): 5054, 6699, 11535 Molecule role: CPS | Shashkov et al. 2016b DOI: 10.1093/glycob/cwv168 |
| Enzyme name: Gtr5K27 Enzyme GenBank ID: ALL34867.1 Gene name: gtr5 | Synthesized dimer: bDGalp(1-3)bDGalpN Donor (ID 35273): ?DGalp(1-P-P-5)xXnucU Acceptor (ID 36235): Ac(1-2)bDGalpN(1-P-P-1)Subst // Subst = undecaprenol Status: predicted in silico
Confirmation methods: Sequencing (gene, protein) ID: 3617 Notes: inverting GT, gene cluster name: KL27, KL44; whole structure is given for KL44, structure of KL27 forms a second side chain of aLegp5Ac7R; name was augmented to make it unique | Organism (ID 7098,17009,17010): Acinetobacter baumannii 1432, 4190, NIPH 70 Full structure (ID 12247): CSDB ID(s): 6748, 10926, 11536 Molecule role: CPS | |
| Enzyme name: Gtr57 Enzyme GenBank ID: ALL34865.1 Gene name: gtr57 | Synthesized dimer: bDGalp(1-6)bDGalp Donor (ID 35273): ?DGalp(1-P-P-5)xXnucU Acceptor (ID 36236): bDGalp(1-3)[Ac(1-2)]bDGalpN(1-P-P-1)Subst // Subst = undecaprenol Status: predicted in silico
Confirmation methods: Sequencing (gene, protein) ID: 3618 Notes: inverting GT, gene cluster name: KL27, KL44; whole structure is given for KL44, structure of KL27 forms a second side chain of aLegp5Ac7R | Organism (ID 7098,17009,17010): Acinetobacter baumannii 1432, 4190, NIPH 70 Full structure (ID 12247): CSDB ID(s): 6748, 10926, 11536 Molecule role: CPS | |
| Enzyme name: Gtr58 Enzyme GenBank ID: ALL34866.1 CAZy family: GT4 Gene name: gtr58 | Synthesized dimer: aDGlcpN(1-3)bDGalp Donor (ID 35226): Ac(1-2)?DGlcpN(1-P-P-5)xXnucU Acceptor (ID 36236): bDGalp(1-3)[Ac(1-2)]bDGalpN(1-P-P-1)Subst // Subst = undecaprenol Status: predicted in silico
Confirmation methods: Sequencing (gene, protein) ID: 3619 Notes: retaining GT, gene cluster name: KL27, KL44; whole structure is given for KL44, structure of KL27 forms a second side chain of aLegp5Ac7R | Organism (ID 7098,17009,17010): Acinetobacter baumannii 1432, 4190, NIPH 70 Full structure (ID 12247): CSDB ID(s): 6748, 10926, 11536 Molecule role: CPS | |
| Enzyme name: Gtr56 Enzyme GenBank ID: ALL34863.1 CAZy family: GT52 Gene name: gtr56 | Synthesized dimer: aLegp(2-6)bDGalp Donor (ID 36318): Ac(1-5)[Ac(1-7)]?XLegp(2-P-5)xXnucC Acceptor (ID 36319): bDGalp(1-6)bDGalp(1-3)[Ac(1-2)]bDGalpN(1-P-P-1)Subst // Subst = undecaprenol Status: predicted in silico
Confirmation methods: Sequencing (gene, protein) ID: 3620 Notes: inverting GT, gene cluster name: KL27, KL44; whole structure is given for KL44, structure of KL27 forms a second side chain of aLegp5Ac7R | Organism (ID 7098,17009,17010): Acinetobacter baumannii 1432, 4190, NIPH 70 Full structure (ID 12247): CSDB ID(s): 6748, 10926, 11536 Molecule role: CPS | |
| Synthesized dimer: aLegp(2-6)bDGalp Donor (ID 36320): lR3HOBut(1-7)[Ac(1-5)]?XLegp(2-P-5)xXnucC Acceptor (ID 36319): bDGalp(1-6)bDGalp(1-3)[Ac(1-2)]bDGalpN(1-P-P-1)Subst // Subst = undecaprenol Status: predicted in silico
Confirmation methods: Sequencing (gene, protein) ID: 3621 Notes: inverting GT, gene cluster name: KL27, KL44; whole structure is given for KL44, structure of KL27 forms a second side chain of aLegp5Ac7R | Organism (ID 7098,17009,17010): Acinetobacter baumannii 1432, 4190, NIPH 70 Full structure (ID 12247): CSDB ID(s): 6748, 10926, 11536 Molecule role: CPS | ||
| Enzyme name: ItrA2K44 Enzyme GenBank ID: QGW59144.1 Gene name: itrA2 | Synthesized dimer: P(?-?)P Donor (ID 35669): Ac(1-2)?DGalpN(1-P-P-5)xXnucU Acceptor (ID 35735): P-1)Subst // Subst = undecaprenol Status: predicted in silico
Confirmation methods: Sequencing (gene, protein) ID: 3622 Notes: gene cluster name: KL44, phosphoglycosyltransferase; name was augmented to make it unique | Organism (ID 17010): Acinetobacter baumannii NIPH 70 Full structure (ID 36315): Molecule role: CPS | Lees-Miller et al. 2013 DOI: 10.1111/mmi.12300 Shashkov et al. 2016b DOI: 10.1093/glycob/cwv168 |
| Enzyme name: WzyK44 Enzyme GenBank ID: QGW59140.1 Gene name: wzyK44 | Synthesized dimer: bDGalpN(1-4)aLegp Donor (ID 36316): Ac(1-2)aDGlcpN(1-3)[Ac(1-5)[<<70%lS3HOBut(1-7)|30%Ac(1-7)>>]aXLegp(2-6)bDGalp(1-6)]bDGalp(1-3)[Ac(1-2)]bDGalpN(1-P-P-1)Subst // Subst = undecaprenol Acceptor (ID 36321): -4)[<<70%lS3HOBut(1-7)|30%Ac(1-7)>>,Ac(1-5)]aXLegp(2-6)bDGalp(1-6)[Ac(1-2)aDGlcpN(1-3)]bDGalp(1-3)[Ac(1-2)]bDGalpN(1- Status: predicted in silico
Confirmation methods: Sequencing (gene, protein) ID: 3623 Notes: gene cluster name: KL44 | Organism (ID 17010): Acinetobacter baumannii NIPH 70 Full structure (ID 12247): CSDB ID(s): 6748, 10926, 11536 Molecule role: CPS | Shashkov et al. 2016b DOI: 10.1093/glycob/cwv168 |
| Enzyme name: WzyK93 Enzyme GenBank ID: DAC80125.1 Gene name: wzy | Synthesized dimer: bDGalpN(1-3)bDGalp Donor (ID 36322): lR3HOBut(1-7)[Ac(1-5)]bXPsep(2-6)aDGalp(1-6)bDGalp(1-3)[Ac(1-2)]bDGalpN(1-P-P-1)Subst // Subst = undecaprenol Acceptor (ID 36323): -3)[lR3HOBut(1-7)[Ac(1-5)]bXPsep(2-6)aDGalp(1-6)]bDGalp(1-3)[Ac(1-2)]bDGalpN(1- Status: predicted in silico
Confirmation methods: Sequencing (gene, protein) ID: 3624 Notes: gene cluster name: KL93 | Organism (ID 7307): Acinetobacter baumannii B11911 Full structure (ID 12565): CSDB ID(s): 2307, 6703, 9741, 11914, 21182 Molecule role: CPS | Kasimova et al. 2017 DOI: 10.1134/S0006297917040101 |
| Enzyme name: Gtr5K93 Enzyme GenBank ID: DAC80127.1 Gene name: gtr5 | Synthesized dimer: bDGalp(1-3)bDGalpN Donor (ID 35273): ?DGalp(1-P-P-5)xXnucU Acceptor (ID 36235): Ac(1-2)bDGalpN(1-P-P-1)Subst // Subst = undecaprenol Status: predicted in silico
Confirmation methods: Sequencing (gene, protein) ID: 3625 Notes: gene cluster name: KL93; name was augmented to make it unique | Organism (ID 7307): Acinetobacter baumannii B11911 Full structure (ID 12565): CSDB ID(s): 2307, 6703, 9741, 11914, 21182 Molecule role: CPS | |
| Enzyme name: Gtr25K93 Enzyme GenBank ID: DAC80126.1 Gene name: gtr25 | Synthesized dimer: aDGalp(1-6)bDGalp Donor (ID 35273): ?DGalp(1-P-P-5)xXnucU Acceptor (ID 36236): bDGalp(1-3)[Ac(1-2)]bDGalpN(1-P-P-1)Subst // Subst = undecaprenol Status: predicted in silico
Confirmation methods: Sequencing (gene, protein) ID: 3626 Notes: gene cluster name: KL93; name was augmented to make it unique | Organism (ID 7307): Acinetobacter baumannii B11911 Full structure (ID 12565): CSDB ID(s): 2307, 6703, 9741, 11914, 21182 Molecule role: CPS | |
| Enzyme name: Gtr167 Enzyme GenBank ID: DAC80124.1 Gene name: gtr167 | Synthesized dimer: bPsep(2-6)aDGalp Donor (ID 36267): lR3HOBut(1-7)[Ac(1-5)]?XPsep(2-P-5)xXnucC Acceptor (ID 36324): aDGalp(1-6)bDGalp(1-3)[Ac(1-2)]bDGalpN(1-P-P-1)Subst // Subst = undecaprenol Status: predicted in silico
Confirmation methods: Sequencing (gene, protein) ID: 3627 Notes: inverting GT, gene cluster name: KL93 | Organism (ID 7307): Acinetobacter baumannii B11911 Full structure (ID 12565): CSDB ID(s): 2307, 6703, 9741, 11914, 21182 Molecule role: CPS | |
| Enzyme name: WzyK13 Enzyme GenBank ID: ASY01670.1 Gene name: wzyK13 Gene cluster ID: MF522810 | Synthesized dimer: aDFucpN(1-4)bDGalp Donor (ID 36325): Ac(1-5)[Ac(1-7)]?XAcip(2-6)bDGalp(1-3)[Ac(1-2)]aLFucpN(1-3)[Ac(1-2)]aDFucpN(1-P-P-1)Subst // Subst = undecaprenol Acceptor (ID 36326): -4)[Ac(1-5)[Ac(1-7)]?XAcip(2-6)]bDGalp(1-3)[Ac(1-2)]aLFucpN(1-3)[Ac(1-2)]aDFucpN(1- Status: predicted in silico
Confirmation methods: Sequencing (gene, protein) ID: 3628 Notes: gene cluster name: KL13 | Organism (ID 17011): Acinetobacter baumannii UMB001 Exact full structure is unknown Molecule role: CPS | Kenyon et al. 2017a DOI: 10.1016/j.carres.2017.10.005 |
| Enzyme name: ItrB3K13 Enzyme GenBank ID: ASR24091.1* Gene name: itrB3 Gene cluster ID: MF522810 | Synthesized dimer: P(?-?)P Donor (ID 36259): Ac(1-2)?DFucpN(1-P-P-5)xXnucU Acceptor (ID 35735): P-1)Subst // Subst = undecaprenol Status: predicted in silico
Confirmation methods: Sequencing (gene, protein) ID: 3629 Notes: gene cluster name: KL13, phosphoglycosyltransferase | Organism (ID 17011): Acinetobacter baumannii UMB001 Exact full structure is unknown Molecule role: CPS | |
| Enzyme name: ItrB3K73 Enzyme GenBank ID: ASR24091.1 Gene name: itrB3 Gene cluster ID: MF522810 | Synthesized dimer: P(?-?)P Donor (ID 36259): Ac(1-2)?DFucpN(1-P-P-5)xXnucU Acceptor (ID 35735): P-1)Subst // Subst = undecaprenol Status: predicted in silico
Confirmation methods: Sequencing (gene, protein) ID: 3630 Notes: gene cluster name: KL73 phosphoglycosyltransferase | Organism (ID 17011,17012): Acinetobacter baumannii UMB001, SGH 0703 Full structure (ID 36327): Molecule role: CPS | |
| Enzyme name: Gtr31K13 Enzyme GenBank ID: ASY01675.1* Gene name: gtr31 Gene cluster ID: MF522810 | Synthesized dimer: aLFucpN(1-3)aDFucpN Donor (ID 36213): Ac(1-2)?LFucpN(1-P-P-5)xXnucU Acceptor (ID 36262): Ac(1-2)aDFucpN(1-P-P-1)Subst // Subst = undecaprenol Status: predicted in silico
Confirmation methods: Sequencing (gene, protein) ID: 3631 Notes: gene cluster name: KL13; name was augmented to make it unique | Organism (ID 17011): Acinetobacter baumannii UMB001 Exact full structure is unknown Molecule role: CPS | |
| Enzyme name: Gtr30K13 Enzyme GenBank ID: ASY01671.1* Gene name: gtr30 Gene cluster ID: MF522810 | Synthesized dimer: bDGalp(1-3)aLFucpN Donor (ID 35273): ?DGalp(1-P-P-5)xXnucU Acceptor (ID 36263): Ac(1-2)aLFucpN(1-3)[Ac(1-2)]aDFucpN(1-P-P-1)Subst // Subst = undecaprenol Status: predicted in silico
Confirmation methods: Sequencing (gene, protein) ID: 3632 Notes: retaining GT, gene cluster name: KL13; name was augmented to make it unique | Organism (ID 17011): Acinetobacter baumannii UMB001 Exact full structure is unknown Molecule role: CPS | |
| Enzyme name: Gtr59K13 Enzyme GenBank ID: WP_000608242.1* Gene name: gtr59 Gene cluster ID: MF522810 | Synthesized dimer: Acip(2-6)bDGalp Donor (ID 36264): Ac(1-5)[Ac(1-7)]?XAcip(2-P-5)xXnucC Acceptor (ID 36328): bDGalp(1-3)[Ac(1-2)]aLFucpN(1-3)[Ac(1-2)]aDFucpN(1-P-P-1)Subst // Subst = undecaprenol Status: predicted in silico
Confirmation methods: Sequencing (gene, protein) ID: 3633 Notes: gene cluster name: KL13; name was augmented to make it unique | Organism (ID 17011): Acinetobacter baumannii UMB001 Exact full structure is unknown Molecule role: CPS | |
| Enzyme name: WzyK73 Enzyme GenBank ID: ASR24084.1 Gene name: wzyK13 Gene cluster ID: ASR24082.1 | Synthesized dimer: aDFucpN(1-4)bDGalp Donor (ID 36329): Ac(1-5)[Ac(1-7)]?X8eAcip(2-6)bDGalp(1-3)[Ac(1-2)]aLFucpN(1-3)[Ac(1-2)]aDFucpN(1-P-P-1)Subst // Subst = undecaprenol Acceptor (ID 36330): -4)[Ac(1-5)[Ac(1-7)]?X8eAcip(2-6)]bDGalp(1-3)[Ac(1-2)]aLFucpN(1-3)[Ac(1-2)]aDFucpN(1- Status: predicted in silico
Confirmation methods: Sequencing (gene, protein) ID: 3634 Notes: gene cluster name: KL73 | Organism (ID 17012): Acinetobacter baumannii SGH 0703 Exact full structure is unknown Molecule role: CPS | |
| Enzyme name: Gtr31K73 Enzyme GenBank ID: ASR24089.1 Gene name: gtr31 Gene cluster ID: ASR24082.1 | Synthesized dimer: aLFucpN(1-3)aDFucpN Donor (ID 36213): Ac(1-2)?LFucpN(1-P-P-5)xXnucU Acceptor (ID 36262): Ac(1-2)aDFucpN(1-P-P-1)Subst // Subst = undecaprenol Status: predicted in silico
Confirmation methods: Sequencing (gene, protein) ID: 3635 Notes: gene cluster name: KL73; name was augmented to make it unique | Organism (ID 17012): Acinetobacter baumannii SGH 0703 Exact full structure is unknown Molecule role: CPS | |
| Enzyme name: Gtr30K73 Enzyme GenBank ID: ASR24085.1 Gene name: gtr30 Gene cluster ID: ASR24082.1 | Synthesized dimer: bDGalp(1-3)aLFucpN Donor (ID 35273): ?DGalp(1-P-P-5)xXnucU Acceptor (ID 36263): Ac(1-2)aLFucpN(1-3)[Ac(1-2)]aDFucpN(1-P-P-1)Subst // Subst = undecaprenol Status: predicted in silico
Confirmation methods: Sequencing (gene, protein) ID: 3636 Notes: gene cluster name: KL73; name was augmented to make it unique | Organism (ID 17012): Acinetobacter baumannii SGH 0703 Exact full structure is unknown Molecule role: CPS | |
| Enzyme name: Gtr59K73 Enzyme GenBank ID: ASR24082.1 Gene name: gtr59 Gene cluster ID: ASR24082.1 | Synthesized dimer: 8eAcip(2-6)bDGalp Donor (ID 36331): Ac(1-5)?X8eAcip(2-P-5)xXnucC Acceptor (ID 36328): bDGalp(1-3)[Ac(1-2)]aLFucpN(1-3)[Ac(1-2)]aDFucpN(1-P-P-1)Subst // Subst = undecaprenol Status: predicted in silico
Confirmation methods: Sequencing (gene, protein) ID: 3637 Notes: gene cluster name: KL73; name was augmented to make it unique | Organism (ID 17012): Acinetobacter baumannii SGH 0703 Exact full structure is unknown Molecule role: CPS | |
| Enzyme name: WzyK11 Enzyme GenBank ID: AHB32462.1 Gene name: wzy | Synthesized dimer: bDGlcpN(1-3)aLRhap Donor (ID 36332): aLRhap(1-3)[Ac(1-2)]aDGlcpN(1-2)bDGlcp(1-3)aL6dTalp(1-3)[Ac(1-2)]bDGlcpN(1-P-P-1)Subst // Subst = undecaprenol Acceptor (ID 36333): -3)aLRhap(1-3)[Ac(1-2)]aDGlcpN(1-2)bDGlcp(1-3)aL6dTalp(1-3)[Ac(1-2)]bDGlcpN(1- Status: predicted in silico
Confirmation methods: Sequencing (gene, protein) ID: 3638 Notes: gene cluster name: KL11 | Organism (ID 17013): Acinetobacter baumannii LUH5545 Full structure (ID 12571): CSDB ID(s): 5854, 6754, 10419, 10873, 12116 Molecule role: CPS | Kenyon et al. 2017b DOI: 10.1016/j.ijbiomac.2017.05.082 |
| Enzyme name: ItrA3K11 Enzyme GenBank ID: AHB32469.1 Gene name: itrA3 | Synthesized dimer: P(?-?)P Donor (ID 35226): Ac(1-2)?DGlcpN(1-P-P-5)xXnucU Acceptor (ID 35735): P-1)Subst // Subst = undecaprenol Status: predicted in silico
Confirmation methods: Sequencing (gene, protein) ID: 3639 Notes: gene cluster name: KL11, phosphoglycosyltransferase; name was augmented to make it unique | Organism (ID 17013): Acinetobacter baumannii LUH5545 Exact full structure is unknown Molecule role: CPS | |
| Enzyme name: Gtr29K11 Enzyme GenBank ID: AHB32306.1 Gene name: gtr29 | Synthesized dimer: aL6dTalp(1-3)bDGlcpN Donor (ID 36334): ?L6dTalp(1-P-P-5)xXnucdT Acceptor (ID 36280): Ac(1-2)bDGlcpN(1-P-P-1)Subst // Subst = undecaprenol Status: predicted in silico
Confirmation methods: Sequencing (gene, protein) ID: 3640 Notes: gene cluster name: KL11; name was augmented to make it unique | Organism (ID 17013): Acinetobacter baumannii LUH5545 Full structure (ID 12571): CSDB ID(s): 5854, 6754, 10419, 10873, 12116 Molecule role: CPS | |
| Enzyme name: Gtr28K11 Enzyme GenBank ID: AHB32464.1 Gene name: gtr28 | Synthesized dimer: bDGlcp(1-3)aL6dTalp Donor (ID 34839): ?DGlcp(1-P-P-5)xXnucU Acceptor (ID 36335): aL6dTalp(1-3)[Ac(1-2)]bDGlcpN(1-P-P-1)Subst // Subst = undecaprenol Status: predicted in silico
Confirmation methods: Sequencing (gene, protein) ID: 3641 Notes: gene cluster name: KL11; name was augmented to make it unique | Organism (ID 17013): Acinetobacter baumannii LUH5545 Full structure (ID 12571): CSDB ID(s): 5854, 6754, 10419, 10873, 12116 Molecule role: CPS | |
| Enzyme name: Gtr27K11 Enzyme GenBank ID: AOX98972.1 CAZy family: GT4 Gene name: gtr27 | Synthesized dimer: aDGlcpN(1-2)bDGlcp Donor (ID 35226): Ac(1-2)?DGlcpN(1-P-P-5)xXnucU Acceptor (ID 36336): bDGlcp(1-3)aL6dTalp(1-3)[Ac(1-2)]bDGlcpN(1-P-P-1)Subst // Subst = undecaprenol Status: predicted in silico
Confirmation methods: Sequencing (gene, protein) ID: 3642 Notes: retaining GT, gene cluster name: KL11; name was augmented to make it unique | Organism (ID 17013): Acinetobacter baumannii LUH5545 Full structure (ID 12571): CSDB ID(s): 5854, 6754, 10419, 10873, 12116 Molecule role: CPS | |
| Enzyme name: Gtr26 Enzyme GenBank ID: AOX98970.1 Gene name: gtr26 | Synthesized dimer: aLRhap(1-3)aDGlcpN Donor (ID 35153): ?LRhap(1-P-P-5)xXnucdT Acceptor (ID 36337): Ac(1-2)aDGlcpN(1-2)bDGlcp(1-3)aL6dTalp(1-3)[Ac(1-2)]bDGlcpN(1-P-P-1)Subst // Subst = undecaprenol Status: predicted in silico
Confirmation methods: Sequencing (gene, protein) ID: 3643 Notes: gene cluster name: KL11 | Organism (ID 17013): Acinetobacter baumannii LUH5545 Full structure (ID 12571): CSDB ID(s): 5854, 6754, 10419, 10873, 12116 Molecule role: CPS | |
| Enzyme name: WzyK83 Enzyme GenBank ID: AHB32311.1 Gene name: wzy | Synthesized dimer: bDGlcpN(1-4)aDGlcpN Donor (ID 36338): aLRhap(1-3)[Ac(1-2)]aDGlcpN(1-2)bDGlcp(1-3)[Ac(1-2)]aL6dTalp(1-3)[Ac(1-2)]bDGlcpN(1-P-P-1)Subst // Subst = undecaprenol Acceptor (ID 36339): -4)[aLRhap(1-3),Ac(1-2)]aDGlcpN(1-2)bDGlcp(1-3)[Ac(1-2)]aL6dTalp(1-3)[Ac(1-2)]bDGlcpN(1- Status: predicted in silico
Confirmation methods: Sequencing (gene, protein) ID: 3644 Notes: gene cluster name: KL83, PSgc8 | Organism (ID 17014): Acinetobacter baumannii LUH5538 Full structure (ID 12573): CSDB ID(s): 5839, 5855, 6752, 10418, 12118 Molecule role: CPS | |
| Enzyme name: ItrA3K83 Enzyme GenBank ID: AHB32305.2 Gene name: itrA3 | Synthesized dimer: P(?-?)P Donor (ID 35226): Ac(1-2)?DGlcpN(1-P-P-5)xXnucU Acceptor (ID 35735): P-1)Subst // Subst = undecaprenol Status: predicted in silico
Confirmation methods: Sequencing (gene, protein) ID: 3645 Notes: gene cluster name: KL83, PSgc8; phosphoglycosyltransferase; name was augmented to make it unique | Organism (ID 17014): Acinetobacter baumannii LUH5538 Exact full structure is unknown Molecule role: CPS | |
| Enzyme name: Gtr29K83 Enzyme GenBank ID: AHB32467.1 Gene name: gtr29 | Synthesized dimer: aL6dTalp(1-3)bDGlcpN Donor (ID 36334): ?L6dTalp(1-P-P-5)xXnucdT Acceptor (ID 36280): Ac(1-2)bDGlcpN(1-P-P-1)Subst // Subst = undecaprenol Status: predicted in silico
Confirmation methods: Sequencing (gene, protein) ID: 3646 Notes: gene cluster name: KL83, PSgc8; name was augmented to make it unique | Organism (ID 17014): Acinetobacter baumannii LUH5538 Full structure (ID 12573): CSDB ID(s): 5839, 5855, 6752, 10418, 12118 Molecule role: CPS | |
| Enzyme name: Gtr60K83 Enzyme GenBank ID: AHB32309.1 Gene name: gtr60 | Synthesized dimer: bDGlcp(1-3)aL6dTalp Donor (ID 34839): ?DGlcp(1-P-P-5)xXnucU Acceptor (ID 36340): Ac(1-2)aL6dTalp(1-3)[Ac(1-2)]bDGlcpN(1-P-P-1)Subst // Subst = undecaprenol Status: predicted in silico
Confirmation methods: Sequencing (gene, protein) ID: 3647 Notes: gene cluster name: KL83, PSgc8; name was augmented to make it unique | Organism (ID 17014): Acinetobacter baumannii LUH5538 Full structure (ID 12573): CSDB ID(s): 5839, 5855, 6752, 10418, 12118 Molecule role: CPS | |
| Enzyme name: Atr8 Enzyme GenBank ID: AHB32308.1 Gene name: atr8 | Synthesized dimer: Ac(1-2)aL6dTalp Acceptor (ID 36340): Ac(1-2)aL6dTalp(1-3)[Ac(1-2)]bDGlcpN(1-P-P-1)Subst // Subst = undecaprenol Status: predicted in silico
Confirmation methods: Sequencing (gene, protein) ID: 3648 Notes: gene cluster name: KL83,, PSgc8; acetyltransferase | Organism (ID 17014): Acinetobacter baumannii LUH5538 Full structure (ID 12573): CSDB ID(s): 5839, 5855, 6752, 10418, 12118 Molecule role: CPS | |
| Enzyme name: Gtr27K83 Enzyme GenBank ID: AHB32310.1 CAZy family: GT4 Gene name: gtr27 | Synthesized dimer: aDGlcpN(1-2)bDGlcp Donor (ID 35226): Ac(1-2)?DGlcpN(1-P-P-5)xXnucU Acceptor (ID 36341): bDGlcp(1-3)[Ac(1-2)]aL6dTalp(1-3)[Ac(1-2)]bDGlcpN(1-P-P-1)Subst // Subst = undecaprenol Status: predicted in silico
Confirmation methods: Sequencing (gene, protein) ID: 3649 Notes: retaining GT, gene cluster name: KL83, PSgc8; name was augmented to make it unique | Organism (ID 17014): Acinetobacter baumannii LUH5538 Full structure (ID 12573): CSDB ID(s): 5839, 5855, 6752, 10418, 12118 Molecule role: CPS | |
| Enzyme name: Gtr154 Enzyme GenBank ID: AHB32312.1 Gene name: gtr154 | Synthesized dimer: aLRhap(1-3)aDGlcpN Donor (ID 35153): ?LRhap(1-P-P-5)xXnucdT Acceptor (ID 36342): Ac(1-2)aDGlcpN(1-2)bDGlcp(1-3)[Ac(1-2)]aL6dTalp(1-3)[Ac(1-2)]bDGlcpN(1-P-P-1)Subst // Subst = undecaprenol Status: predicted in silico
Confirmation methods: Sequencing (gene, protein) ID: 3650 Notes: gene cluster name: KL83, PSgc8 | Organism (ID 17014): Acinetobacter baumannii LUH5538 Full structure (ID 12573): CSDB ID(s): 5839, 5855, 6752, 10418, 12118 Molecule role: CPS | |
| Enzyme name: ItrA3K24 Enzyme GenBank ID: APE73827.1 Gene name: itrA3 Gene cluster ID: KX756650 | Synthesized dimer: P(?-?)P Donor (ID 35226): Ac(1-2)?DGlcpN(1-P-P-5)xXnucU Acceptor (ID 35735): P-1)Subst // Subst = undecaprenol Status: predicted in silico
Confirmation methods: Sequencing (gene, protein) ID: 3651 Notes: gene cluster name: KL24, phosphoglycosyltransferase; name was augmented to make it unique | Organism (ID 7329): Acinetobacter baumannii RCH51 Full structure (ID 36343): Molecule role: CPS | Kenyon et al. 2017c DOI: 10.1099/mic.0.000430 |
| Enzyme name: WzyK24 Enzyme GenBank ID: APE73838.1 Gene name: wzyGI-2 Gene cluster ID: KX756650 | Synthesized dimer: bDGlcpN(1-3)aDGalp Donor (ID 36344): Ac(1-3)bDFucp3N(1-3)[aDGalp(1-6),Ac(1-2)]aDGlcpN(1-4)[Ac(1-2)]aDGalpN(1-3)[Ac(1-2)]bDGlcpN(1-P-P-1)Subst // Subst = undecaprenol Acceptor (ID 36345): -3)aDGalp(1-6)[Ac(1-3)bDFucp3N(1-3),Ac(1-2)]aDGlcpN(1-4)[Ac(1-2)]aDGalpN(1-3)[Ac(1-2)]bDGlcpN(1- Status: predicted in silico
Confirmation methods: Sequencing (gene, protein) ID: 3652 Notes: gene cluster name: KL24 | Organism (ID 7329): Acinetobacter baumannii RCH51 Full structure (ID 12596): CSDB ID(s): 6740, 8598, 11922 Molecule role: CPS | |
| Enzyme name: Gtr50K24 Enzyme GenBank ID: APE73825.1 Gene name: gtr50 Gene cluster ID: KX756650 | Synthesized dimer: aDGalpN(1-3)bDGlcpN Donor (ID 35669): Ac(1-2)?DGalpN(1-P-P-5)xXnucU Acceptor (ID 36280): Ac(1-2)bDGlcpN(1-P-P-1)Subst // Subst = undecaprenol Status: predicted in silico
Confirmation methods: Sequencing (gene, protein) ID: 3653 Notes: gene cluster name: KL24; name was augmented to make it unique | Organism (ID 7329): Acinetobacter baumannii RCH51 Full structure (ID 12596): CSDB ID(s): 6740, 8598, 11922 Molecule role: CPS | |
| Enzyme name: Gtr49K24 Enzyme GenBank ID: APE73824.1 Gene name: gtr49 Gene cluster ID: KX756650 | Synthesized dimer: aDGlcpN(1-4)aDGalpN Donor (ID 35226): Ac(1-2)?DGlcpN(1-P-P-5)xXnucU Acceptor (ID 36312): Ac(1-2)aDGalpN(1-3)[Ac(1-2)]bDGlcpN(1-P-P-1)Subst // Subst = undecaprenol Status: predicted in silico
Confirmation methods: Sequencing (gene, protein) ID: 3654 Notes: gene cluster name: KL24; name was augmented to make it unique | Organism (ID 7329): Acinetobacter baumannii RCH51 Full structure (ID 12596): CSDB ID(s): 6740, 8598, 11922 Molecule role: CPS | |
| Enzyme name: Gtr48 Enzyme GenBank ID: APE73823.1 Gene name: gtr48 Gene cluster ID: KX756650 | Synthesized dimer: aDGalp(1-6)aDGlcpN Donor (ID 35273): ?DGalp(1-P-P-5)xXnucU Acceptor (ID 36313): Ac(1-2)aDGlcpN(1-4)[Ac(1-2)]aDGalpN(1-3)[Ac(1-2)]bDGlcpN(1-P-P-1)Subst // Subst = undecaprenol Status: predicted in silico
Confirmation methods: Sequencing (gene, protein) ID: 3655 Notes: gene cluster name: KL24 | Organism (ID 7329): Acinetobacter baumannii RCH51 Full structure (ID 12596): CSDB ID(s): 6740, 8598, 11922 Molecule role: CPS | |
| Enzyme name: Gtr47 Enzyme GenBank ID: APE73822.1 Gene name: gtr47 Gene cluster ID: KX756650 | Synthesized dimer: bDFucp3N(1-3)aDGlcpN Donor (ID 36346): Ac(1-3)?DFucp3N(1-P-P-5)xXnucdT Acceptor (ID 36313): Ac(1-2)aDGlcpN(1-4)[Ac(1-2)]aDGalpN(1-3)[Ac(1-2)]bDGlcpN(1-P-P-1)Subst // Subst = undecaprenol Status: predicted in silico
Confirmation methods: Sequencing (gene, protein) ID: 3656 Notes: gene cluster name: KL24 | Organism (ID 7329): Acinetobacter baumannii RCH51 Full structure (ID 12596): CSDB ID(s): 6740, 8598, 11922 Molecule role: CPS | |
| Enzyme name: WzyK15 Enzyme GenBank ID: AHB32357.1 Gene name: wzy Gene cluster ID: KC526900 | Synthesized dimer: aDQuipN4N(1-3)aDQuipN4N Donor (ID 36347): Ac(1-2)[Ac(1-4)]aDQuipN4N(1-4)[Ac(1-3),Ac(1-2)]bDGlcpN3NA(1-4)[Ac(1-3),Ac(1-2)]bDGlcpN3NA(1-3)[Ac(1-4),Ac(1-2)]aDQuipN4N(1-P-P-1)Subst // Subst = undecaprenol Acceptor (ID 36348): -3)[Ac(1-4),Ac(1-2)]aDQuipN4N(1-4)[Ac(1-3),Ac(1-2)]bDGlcpN3NA(1-4)[Ac(1-3),Ac(1-2)]bDGlcpN3NA(1-3)[Ac(1-4),Ac(1-2)]aDQuipN4N(1- Status: predicted in silico
Confirmation methods: Sequencing (gene, protein) ID: 3657 Notes: gene cluster name: KL15, PSgc27 | Organism (ID 16994): Acinetobacter baumannii LUH5554 Full structure (ID 12676): CSDB ID(s): 6745, 12231 Molecule role: CPS | Shashkov et al. 2017 DOI: 10.1016/j.carres.2017.05.017 |
| Enzyme name: ItrA1K15 Enzyme GenBank ID: AHB32360.1 Gene name: itrA1 Gene cluster ID: KC526900 | Synthesized dimer: P(?-?)P Donor (ID 36294): Ac(1-2)[Ac(1-4)]?DQuipN(1-P-P-5)xXnucU Acceptor (ID 35735): P-1)Subst // Subst = undecaprenol Status: predicted in silico
Confirmation methods: Sequencing (gene, protein) ID: 3658 Notes: gene cluster name: KL15, PSgc27; phosphoglycosyltransferase; name was augmented to make it unique | Organism (ID 16994): Acinetobacter baumannii LUH5554 Exact full structure is unknown Molecule role: CPS | |
| Enzyme name: Gtr36 Enzyme GenBank ID: AHB32359.1 Gene name: gtr36 Gene cluster ID: KC526900 | Synthesized dimer: bDGlcpN3NA(1-3)aDQuipN4N Donor (ID 36349): Ac(1-2)[Ac(1-3)]?DGlcpN3NA(1-P-P-5)xXnucU Acceptor (ID 36350): Ac(1-2)[Ac(1-4)]aDQuipN4N(1-P-P-1)Subst // Subst = undecaprenol Status: predicted in silico
Confirmation methods: Sequencing (gene, protein) ID: 3659 Notes: gene cluster name: KL15, PSgc27 | Organism (ID 16994): Acinetobacter baumannii LUH5554 Full structure (ID 12676): CSDB ID(s): 6745, 12231 Molecule role: CPS | |
| Enzyme name: Gtr35 Enzyme GenBank ID: AHB32358.1 Gene name: gtr35 Gene cluster ID: KC526900 | Synthesized dimer: bDGlcpN3NA(1-4)bDGlcpN3NA Donor (ID 36349): Ac(1-2)[Ac(1-3)]?DGlcpN3NA(1-P-P-5)xXnucU Acceptor (ID 36351): Ac(1-2)[Ac(1-3)]bDGlcpN3NA(1-3)[Ac(1-4),Ac(1-2)]aDQuipN4N(1-P-P-1)Subst // Subst = undecaprenol Status: predicted in silico
Confirmation methods: Sequencing (gene, protein) ID: 3660 Notes: gene cluster name: KL15, PSgc27 | Organism (ID 16994): Acinetobacter baumannii LUH5554 Full structure (ID 12676): CSDB ID(s): 6745, 12231 Molecule role: CPS | |
| Enzyme name: Gtr34 Enzyme GenBank ID: AHB32355.1 Gene name: gtr34 Gene cluster ID: KC526900 | Synthesized dimer: aDQuipN4N(1-4)bDGlcpN3NA Donor (ID 36294): Ac(1-2)[Ac(1-4)]?DQuipN(1-P-P-5)xXnucU Acceptor (ID 36352): Ac(1-2)[Ac(1-3)]bDGlcpN3NA(1-4)[Ac(1-3),Ac(1-2)]bDGlcpN3NA(1-3)[Ac(1-4),Ac(1-2)]aDQuipN4N(1-P-P-1)Subst // Subst = undecaprenol Status: predicted in silico
Confirmation methods: Sequencing (gene, protein) ID: 3661 Notes: gene cluster name: KL15, PSgc27 | Organism (ID 16994): Acinetobacter baumannii LUH5554 Full structure (ID 12676): CSDB ID(s): 6745, 12231 Molecule role: CPS | |
| Enzyme name: WzyK35 Enzyme GenBank ID: AHB32267.1 Gene name: wzy Gene cluster ID: KC526896 | Synthesized dimer: bDQuipN4N(1-3)aDGalpNA Donor (ID 36353): Ac(1-2)[Ac(1-4)]aDGalpNA(1-4)[Ac(1-3),Ac(1-2)]aDGalpNA(1-4)[Ac(1-3),Ac(1-2)]aDGalpNA(1-3)[Ac(1-4),Ac(1-2)]bDQuipN4N(1-P-P-1)Subst // Subst = undecaprenol Acceptor (ID 36354): -3)[Ac(1-4),Ac(1-2)]aDGalpNA(1-4)[Ac(1-3),Ac(1-2)]aDGalpNA(1-4)[Ac(1-3),Ac(1-2)]aDGalpNA(1-3)[Ac(1-4),Ac(1-2)]bDQuipN4N(1- Status: predicted in silico
Confirmation methods: Sequencing (gene, protein) ID: 3662 Notes: gene cluster name: KL35, PSgc6 | Organism (ID 17015): Acinetobacter baumannii LUH5535 Full structure (ID 12675): CSDB ID(s): 6746, 12230 Molecule role: CPS | |
| Enzyme name: ItrA1K35 Enzyme GenBank ID: AHB32263.1 Gene name: itrA1 Gene cluster ID: KC526896 | Synthesized dimer: P(?-?)P Donor (ID 36294): Ac(1-2)[Ac(1-4)]?DQuipN(1-P-P-5)xXnucU Acceptor (ID 35735): P-1)Subst // Subst = undecaprenol Status: predicted in silico
Confirmation methods: Sequencing (gene, protein) ID: 3663 Notes: gene cluster name: KL35, PSgc6; phosphoglycosyltransferase; name was augmented to make it unique | Organism (ID 17015): Acinetobacter baumannii LUH5535 Exact full structure is unknown Molecule role: CPS | |
| Enzyme name: Atr17 Enzyme GenBank ID: AHB32266.1 Gene name: atr17 Gene cluster ID: KC526896 | Synthesized dimer: Ac(1-3)aDGalpNA Acceptor (ID 36355): Ac(1-2)aDGalpNA(1-3)[Ac(1-4),Ac(1-2)]bDQuipN4N(1-P-P-1)Subst // Subst = undecaprenol Status: predicted in silico
Confirmation methods: Sequencing (gene, protein) ID: 3664 Notes: multiple, gene cluster name: KL35, PSgc6; acetyltransferase | Organism (ID 17015): Acinetobacter baumannii LUH5535 Full structure (ID 12675): CSDB ID(s): 6746, 12230 Molecule role: CPS | |
| Synthesized dimer: Ac(1-3)aDGalpNA Acceptor (ID 36356): Ac(1-2)aDGalpNA(1-4)[Ac(1-3),Ac(1-2)]aDGalpNA(1-3)[Ac(1-4),Ac(1-2)]bDQuipN4N(1-P-P-1)Subst // Subst = undecaprenol Status: predicted in silico
Confirmation methods: Sequencing (gene, protein) ID: 3665 Notes: multiple, gene cluster name: KL35, PSgc6; acetyltransferase | Organism (ID 17015): Acinetobacter baumannii LUH5535 Full structure (ID 12675): CSDB ID(s): 6746, 12230 Molecule role: CPS | ||
| Enzyme name: Atr16 Enzyme GenBank ID: AHB32268.2 Gene name: atr16 Gene cluster ID: KC526896 | Synthesized dimer: Ac(1-4)aDGalpNA Acceptor (ID 36357): Ac(1-2)aDGalpNA(1-4)[Ac(1-3),Ac(1-2)]aDGalpNA(1-4)[Ac(1-3),Ac(1-2)]aDGalpNA(1-3)[Ac(1-4),Ac(1-2)]bDQuipN4N(1-P-P-1)Subst // Subst = undecaprenol Status: predicted in silico
Confirmation methods: Sequencing (gene, protein) ID: 3666 Notes: gene cluster name: KL35, PSgc6; acetyltransferase | Organism (ID 17015): Acinetobacter baumannii LUH5535 Full structure (ID 12675): CSDB ID(s): 6746, 12230 Molecule role: CPS | |
| Enzyme name: Gtr40K35 Enzyme GenBank ID: AHB32264.1 Gene name: gtr40 Gene cluster ID: KC526896 | Synthesized dimer: aDGalpNA(1-3)aDQuipN4N Donor (ID 36216): Ac(1-2)?DGalpNA(1-P-P-5)xXnucU Acceptor (ID 36350): Ac(1-2)[Ac(1-4)]aDQuipN4N(1-P-P-1)Subst // Subst = undecaprenol Status: predicted in silico
Confirmation methods: Sequencing (gene, protein) ID: 3667 Notes: gene cluster name: KL35, PSgc6; name was augmented to make it unique | Organism (ID 17015): Acinetobacter baumannii LUH5535 Full structure (ID 36358): Molecule role: CPS | |
| Enzyme name: Gtr71 Enzyme GenBank ID: AHB32265.1 Gene name: gtr71 Gene cluster ID: KC526896 | Synthesized dimer: aDGalpNA(1-4)aDGalpNA Donor (ID 36216): Ac(1-2)?DGalpNA(1-P-P-5)xXnucU Acceptor (ID 36359): Ac(1-2)[Ac(1-3)]aDGalpNA(1-3)[Ac(1-4),Ac(1-2)]bDQuipN4N(1-P-P-1)Subst // Subst = undecaprenol Status: predicted in silico
Confirmation methods: Sequencing (gene, protein) ID: 3668 Notes: multifunctional, gene cluster name: KL35, PSgc6 | Organism (ID 17015): Acinetobacter baumannii LUH5535 Full structure (ID 12675): CSDB ID(s): 6746, 12230 Molecule role: CPS | |
| Synthesized dimer: aDGalpNA(1-4)aDGalpNA Donor (ID 36216): Ac(1-2)?DGalpNA(1-P-P-5)xXnucU Acceptor (ID 36360): Ac(1-2)[Ac(1-3)]aDGalpNA(1-4)[Ac(1-3),Ac(1-2)]aDGalpNA(1-3)[Ac(1-4),Ac(1-2)]bDQuipN4N(1-P-P-1)Subst // Subst = undecaprenol Status: predicted in silico
Confirmation methods: Sequencing (gene, protein) ID: 3669 Notes: multifunctional , gene cluster name: KL35, PSgc6 | Organism (ID 17015): Acinetobacter baumannii LUH5535 Full structure (ID 12675): CSDB ID(s): 6746, 12230 Molecule role: CPS | ||
| Enzyme name: ItrB3K125 Enzyme GenBank ID: AWU46321.1 Gene name: itrB3 Gene cluster ID: MH306195 | Synthesized dimer: P(?-?)P Donor (ID 36259): Ac(1-2)?DFucpN(1-P-P-5)xXnucU Acceptor (ID 35735): P-1)Subst // Subst = undecaprenol Status: predicted in silico
Confirmation methods: Sequencing (gene, protein) ID: 3670 Notes: gene cluster name: KL125, phosphoglycosyltransferase; name was augmented to make it unique | Organism (ID 7623): Acinetobacter baumannii MAR13-1452 Full structure (ID 36361): Molecule role: CPS | Arbatsky et al. 2018 DOI: 10.1016/j.ijbiomac.2018.06.029 |
| Enzyme name: WzyK125 Enzyme GenBank ID: AWU46315.1 Gene name: wzy Gene cluster ID: MH306195 | Synthesized dimer: aDFucpN(1-4)bDManpNA Donor (ID 36362): Ac(1-2)aDGalpN(1-3)[Ac(1-2)bDManpNA(1-4),Ac(1-2)]aLFucpN(1-3)[Ac(1-2)]aDFucpN(1-P-P-1)Subst // Subst = undecaprenol) Acceptor (ID 36363): -4)[Ac(1-2)]bDManpNA(1-4)[Ac(1-2)aDGalpN(1-3),Ac(1-2)]aLFucpN(1-3)[Ac(1-2)]aDFucpN(1- Status: predicted in silico
Confirmation methods: Sequencing (gene, protein) ID: 3671 Notes: gene cluster name: KL125 | Organism (ID 7623): Acinetobacter baumannii MAR13-1452 Full structure (ID 12877): CSDB ID(s): 6733, 12867 Molecule role: CPS | |
| Enzyme name: Gtr31K125 Enzyme GenBank ID: AWU46319.1 Gene name: gtr31 Gene cluster ID: MH306195 | Synthesized dimer: aLFucpN(1-3)aDFucpN Donor (ID 36213): Ac(1-2)?LFucpN(1-P-P-5)xXnucU Acceptor (ID 36262): Ac(1-2)aDFucpN(1-P-P-1)Subst // Subst = undecaprenol Status: predicted in silico
Confirmation methods: Sequencing (gene, protein) ID: 3672 Notes: gene cluster name: KL125; name was augmented to make it unique | Organism (ID 7623): Acinetobacter baumannii MAR13-1452 Full structure (ID 12877): CSDB ID(s): 6733, 12867 Molecule role: CPS | |
| Enzyme name: Gtr198 Enzyme GenBank ID: AWU46313.1 Gene name: gtr198 Gene cluster ID: MH306195 | Synthesized dimer: bDManpNA(1-4)aLFucpN Donor (ID 36200): Ac(1-2)?DManpN(1-P-P-5)xXnucU Acceptor (ID 36263): Ac(1-2)aLFucpN(1-3)[Ac(1-2)]aDFucpN(1-P-P-1)Subst // Subst = undecaprenol Status: predicted in silico
Confirmation methods: Sequencing (gene, protein) ID: 3673 Notes: gene cluster name: KL125 | Organism (ID 7623): Acinetobacter baumannii MAR13-1452 Full structure (ID 12877): CSDB ID(s): 6733, 12867 Molecule role: CPS | |
| Enzyme name: Gtr199 Enzyme GenBank ID: AWU46314.1 Gene name: gtr199 Gene cluster ID: MH306195 | Synthesized dimer: aDGalpN(1-3)aLFucpN Donor (ID 35669): Ac(1-2)?DGalpN(1-P-P-5)xXnucU Acceptor (ID 36364): Ac(1-2)bDManpNA(1-4)[Ac(1-2)]aLFucpN(1-3)[Ac(1-2)]aDFucpN(1-P-P-1)Subst // Subst = undecaprenol Status: predicted in silico
Confirmation methods: Sequencing (gene, protein) ID: 3674 Notes: gene cluster name: KL125 | Organism (ID 7623): Acinetobacter baumannii MAR13-1452 Full structure (ID 12877): CSDB ID(s): 6733, 12867 Molecule role: CPS | |
| Enzyme name: ItrA1K20 Enzyme GenBank ID: AIT56463.1 Gene name: iItrA1 Gene cluster ID: JQ684178.2 | Synthesized dimer: P(?-?)P Donor (ID 36294): Ac(1-2)[Ac(1-4)]?DQuipN(1-P-P-5)xXnucU Acceptor (ID 35735): P-1)Subst // Subst = undecaprenol Status: predicted in silico
Confirmation methods: Sequencing (gene, protein) ID: 3675 Notes: gene cluster name: KL20, phosphoglycosyltransferase; name was augmented to make it unique | Organism (ID 7728): Acinetobacter baumannii A388 Full structure (ID 36365): Molecule role: CPS | Kasimova et al. 2018a DOI: 10.1093/glycob/cwy074 |
| Enzyme name: WzyK20 Enzyme GenBank ID: AIT56459.1 Gene name: wzy Gene cluster ID: JQ684178.2 | Synthesized dimer: bDQuipN4N(1-2)bDGalp Donor (ID 36366): xRPyr(2-4:2-6)bDGalp(1-3)[Ac(1-2)]bDGlcpN(1-4)bDGlcpA(1-3)[<<66%lS3HOBut(1-4)|33%Ac(1-4)>>,Ac(1-2)]bDQuipN4N(1-P-P-1)Subst // Subst = undecaprenol Acceptor (ID 36367): -2)[xRPyr(2-4:2-6)]bDGalp(1-3)[Ac(1-2)]bDGlcpN(1-4)bDGlcpA(1-3)[<<66%lS3HOBut(1-4)|33%Ac(1-4)>>,Ac(1-2)]bDQuipN4N(1- Status: predicted in silico
Confirmation methods: Sequencing (gene, protein) ID: 3676 Notes: gene cluster name: KL20 | Organism (ID 7728): Acinetobacter baumannii A388 Exact full structure is unknownCSDB ID(s): 6743, 12621 Molecule role: CPS | |
| Enzyme name: Gtr44K20 Enzyme GenBank ID: AIT56462.1 Gene name: gtr44 Gene cluster ID: JQ684178.2 | Synthesized dimer: bDGlcpA(1-3)bDQuipN4N Donor (ID 35444): ?DGlcpA(1-P-P-5)xXnucU Acceptor (ID 36368): Ac(1-2)[<<66%lS3HOBut(1-4)|33%Ac(1-4)>>]bDQuipN4N(1-P-P-1)Subst // Subst = undecaprenol Status: predicted in silico
Confirmation methods: Sequencing (gene, protein) ID: 3677 Notes: gene cluster name: KL20; name was augmented to make it unique | Organism (ID 7728): Acinetobacter baumannii A388 Exact full structure is unknownCSDB ID(s): 6743, 12621 Molecule role: CPS | |
| Enzyme name: Gtr43 Enzyme GenBank ID: AIT56460.1 CAZy family: GT2 Gene name: gtr43 Gene cluster ID: JQ684178.2 | Synthesized dimer: bDGlcpN(1-4)bDGlcpA Donor (ID 35226): Ac(1-2)?DGlcpN(1-P-P-5)xXnucU Acceptor (ID 36369): bDGlcpA(1-3)[<<66%lS3HOBut(1-4)|33%Ac(1-4)>>,Ac(1-2)]bDQuipN4N(1-P-P-1)Subst // Subst = undecaprenol Status: predicted in silico
Confirmation methods: Sequencing (gene, protein) ID: 3678 Notes: inverting GT, gene cluster name: KL20 | Organism (ID 7728): Acinetobacter baumannii A388 Exact full structure is unknownCSDB ID(s): 6743, 12621 Molecule role: CPS | |
| Enzyme name: Gtr42K20 Enzyme GenBank ID: AIT56458.1 Gene name: gtr42 Gene cluster ID: JQ684178.2 | Synthesized dimer: bDGalp(1-3)bDGlcpN Donor (ID 35273): ?DGalp(1-P-P-5)xXnucU Acceptor (ID 36370): Ac(1-2)bDGlcpN(1-4)bDGlcpA(1-3)[<<66%lS3HOBut(1-4)|33%Ac(1-4)>>,Ac(1-2)]bDQuipN4N Status: predicted in silico
Confirmation methods: Sequencing (gene, protein) ID: 3679 Notes: gene cluster name: KL20; name was augmented to make it unique | Organism (ID 7728): Acinetobacter baumannii A388 Exact full structure is unknownCSDB ID(s): 6743, 12621 Molecule role: CPS | |
| Enzyme name: Ptr2K20 Enzyme GenBank ID: AIT56457.1 Gene name: ptr2 Gene cluster ID: JQ684178.2 | Synthesized dimer: RPyr(2-4)bDGalp Acceptor (ID 36371): bDGalp(1-3)[Ac(1-2)]bDGlcpN(1-4)bDGlcpA(1-3)[<<66%lS3HOBut(1-4)|33%Ac(1-4)>>,Ac(1-2)]bDQuipN4N(1-P-P-1)Subst // Subst = undecaprenol Status: predicted in silico
Confirmation methods: Sequencing (gene, protein) ID: 3680 Notes: gene cluster name: KL20, pyranyltransferase; name was augmented to make it unique | Organism (ID 7728): Acinetobacter baumannii A388 Exact full structure is unknownCSDB ID(s): 6743, 12621 Molecule role: CPS | |
| Enzyme name: ItrA1K21 Enzyme GenBank ID: AUG44321.1 Gene name: itrA1 Gene cluster ID: MG231275.1 | Synthesized dimer: P(?-?)P Donor (ID 36294): Ac(1-2)[Ac(1-4)]?DQuipN(1-P-P-5)xXnucU Acceptor (ID 35735): P-1)Subst // Subst = undecaprenol Status: predicted in silico
Confirmation methods: Sequencing (gene, protein) ID: 3681 Notes: gene cluster name: KL21 , phosphoglycosyltransferase; name was augmented to make it unique | Organism (ID 7729): Acinetobacter baumannii G21 Full structure (ID 36372): Molecule role: CPS | |
| Enzyme name: WzyK21 Enzyme GenBank ID: AUG44317.1 Gene name: wzy Gene cluster ID: MG231275.1 | Synthesized dimer: bDQuipN4N(1-2)bDGalp Donor (ID 36373): xRPyr(2-4:2-6)bDGalp(1-3)[Ac(1-2)]aDGlcpN(1-4)bDGlcpA(1-3)[<<50%lS3HOBut(1-4)|50%Ac(1-4)>>,Ac(1-2)]bDQuipN4N(1-P-P-1)Subst // Subst = undecaprenol Acceptor (ID 36374): -2)[xRPyr(2-4:2-6)]bDGalp(1-3)[Ac(1-2)]aDGlcpN(1-4)bDGlcpA(1-3)[<<50%lS3HOBut(1-4)|50%Ac(1-4)>>,Ac(1-2)]bDQuipN4N(1- Status: predicted in silico
Confirmation methods: Sequencing (gene, protein) ID: 3682 Notes: gene cluster name: KL21 | Organism (ID 7729): Acinetobacter baumannii G21 Exact full structure is unknownCSDB ID(s): 6744, 12625 Molecule role: CPS | |
| Enzyme name: Gtr44K21 Enzyme GenBank ID: AUG44320.1 Gene name: gtr44 Gene cluster ID: MG231275.1 | Synthesized dimer: bDGlcpA(1-3)bDQuipN4N Donor (ID 35444): ?DGlcpA(1-P-P-5)xXnucU Acceptor (ID 36375): Ac(1-2)[<<50%lS3HOBut(1-4)|50%Ac(1-4)>>]bDQuipN4N(1-P-P-1)Subst // Subst = undecaprenol Status: predicted in silico
Confirmation methods: Sequencing (gene, protein) ID: 3683 Notes: gene cluster name: KL21; name was augmented to make it unique | Organism (ID 7729): Acinetobacter baumannii G21 Exact full structure is unknownCSDB ID(s): 6744, 12625 Molecule role: CPS | |
| Enzyme name: Gtr45 Enzyme GenBank ID: AUG44318.1 CAZy family: GT4 Gene name: gtr45 Gene cluster ID: MG231275.1 | Synthesized dimer: aDGlcpN(1-4)bDGlcpA Donor (ID 35226): Ac(1-2)?DGlcpN(1-P-P-5)xXnucU Acceptor (ID 36376): bDGlcpA(1-3)[<<50%lS3HOBut(1-4)|50%Ac(1-4)>>,Ac(1-2)]bDQuipN4N(1-P-P-1)Subst // Subst = undecaprenol Status: predicted in silico
Confirmation methods: Sequencing (gene, protein) ID: 3684 Notes: retaining GT, gene cluster name: KL21 | Organism (ID 7729): Acinetobacter baumannii G21 Exact full structure is unknownCSDB ID(s): 6744, 12625 Molecule role: CPS | |
| Enzyme name: Gtr42K21 Enzyme GenBank ID: AUG44316.1 Gene name: gtr42 Gene cluster ID: MG231275.1 | Synthesized dimer: bDGalp(1-3)aDGlcpN Donor (ID 35273): ?DGalp(1-P-P-5)xXnucU Acceptor (ID 36377): Ac(1-2)aDGlcpN(1-4)bDGlcpA(1-3)[<<50%lS3HOBut(1-4)|50%Ac(1-4)>>,Ac(1-2)]bDQuipN4N(1-P-P-1)Subst // Subst = undecaprenol Status: predicted in silico
Confirmation methods: Sequencing (gene, protein) ID: 3685 Notes: gene cluster name: KL21; name was augmented to make it unique | Organism (ID 7729): Acinetobacter baumannii G21 Exact full structure is unknownCSDB ID(s): 6744, 12625 Molecule role: CPS | |
| Enzyme name: Ptr2K21 Enzyme GenBank ID: AUG44315 Gene name: ptr2 Gene cluster ID: MG231275.1 | Synthesized dimer: RPyr(2-4)bDGalp Acceptor (ID 36378): bDGalp(1-3)[Ac(1-2)]bDGlcpN(1-4)bDGlcpA(1-3)[<<50%lS3HOBut(1-4)|50%Ac(1-4)>>,Ac(1-2)]bDQuipN4N(1-P-P-1)Subst // Subst = undecaprenol Status: predicted in silico
Confirmation methods: Sequencing (gene, protein) ID: 3686 Notes: gene cluster name: KL21, pyranyltransferase; name was augmented to make it unique | Organism (ID 7729): Acinetobacter baumannii G21 Exact full structure is unknownCSDB ID(s): 6744, 12625 Molecule role: CPS | |
| Enzyme name: ItrA2K82 Enzyme GenBank ID: AHB32565.1 Gene name: itrA2 Gene cluster ID: KC526908 | Synthesized dimer: P(?-?)P Donor (ID 35669): Ac(1-2)?DGalpN(1-P-P-5)xXnucU Acceptor (ID 35735): P-1)Subst // Subst = undecaprenol Status: predicted in silico
Confirmation methods: Sequencing (gene, protein) ID: 3687 Notes: gene cluster name: KL82, PSgc3; phosphoglycosyltransferase; name was augmented to make it unique | Organism (ID 7727): Acinetobacter baumannii LUH5534 Full structure (ID 36379): Molecule role: CPS | Kasimova et al. 2018b DOI: 10.1134/S0006297918070064 |
| Enzyme name: WzyK82 Enzyme GenBank ID: AHB32563.1 Gene name: wzy Gene cluster ID: KC526908 | Synthesized dimer: bDGalpN(1-2)bDGalp Donor (ID 36380): xRPyr(2-4:2-6)bDGalp(1-3)[Ac(1-2)]aDGlcpN(1-3)bDGalp(1-3)[Ac(1-2)]bDGalpN(1-P-P-1)Subst // Subst = undecaprenol Acceptor (ID 36381): -2)[xRPyr(2-4:2-6)]bDGalp(1-3)[Ac(1-2)]aDGlcpN(1-3)bDGalp(1-3)[Ac(1-2)]bDGalpN(1- Status: predicted in silico
Confirmation methods: Sequencing (gene, protein) ID: 3688 Notes: gene cluster name: KL82, PSgc3 | Organism (ID 7727): Acinetobacter baumannii LUH5534 Exact full structure is unknown Molecule role: CPS | |
| Enzyme name: Gtr5K82 Enzyme GenBank ID: AHB32564.1 Gene name: gtr5 Gene cluster ID: KC526908 | Synthesized dimer: bDGalp(1-3)bDGalpN Donor (ID 35273): ?DGalp(1-P-P-5)xXnucU Acceptor (ID 36235): Ac(1-2)bDGalpN(1-P-P-1)Subst // Subst = undecaprenol Status: predicted in silico
Confirmation methods: Sequencing (gene, protein) ID: 3689 Notes: gene cluster name: KL82, PSgc3; name was augmented to make it unique | Organism (ID 7727): Acinetobacter baumannii LUH5534 Exact full structure is unknown Molecule role: CPS | |
| Enzyme name: Gtr153 Enzyme GenBank ID: AHB32562.1 Gene name: gtr153 Gene cluster ID: KC526908 | Synthesized dimer: aDGlcpN(1-3)bDGalp Donor (ID 35226): Ac(1-2)?DGlcpN(1-P-P-5)xXnucU Acceptor (ID 36236): bDGalp(1-3)[Ac(1-2)]bDGalpN(1-P-P-1)Subst // Subst = undecaprenol Status: predicted in silico
Confirmation methods: Sequencing (gene, protein) ID: 3690 Notes: gene cluster name: KL82, PSgc3 | Organism (ID 7727): Acinetobacter baumannii LUH5534 Exact full structure is unknown Molecule role: CPS | |
| Enzyme name: Gtr152 Enzyme GenBank ID: AHB32561.1 Gene name: gtr152 Gene cluster ID: KC526908 | Synthesized dimer: bDGalp(1-3)aDGlcpN Donor (ID 35273): ?DGalp(1-P-P-5)xXnucU Acceptor (ID 36382): Ac(1-2)aDGlcpN(1-3)bDGalp(1-3)[Ac(1-2)]bDGalpN(1-P-P-1)Subst // Subst = undecaprenol Status: predicted in silico
Confirmation methods: Sequencing (gene, protein) ID: 3691 Notes: gene cluster name: KL82, PSgc3 | Organism (ID 7727): Acinetobacter baumannii LUH5534 Exact full structure is unknown Molecule role: CPS | |
| Enzyme name: Ptr5 Enzyme GenBank ID: AHB32560.1 Gene name: ptr5 Gene cluster ID: KC526908 | Synthesized dimer: RPyr(2-4)bDGalp Acceptor (ID 36383): bDGalp(1-3)[Ac(1-2)]aDGlcpN(1-3)bDGalp(1-3)[Ac(1-2)]bDGalpN(1-P-P-1)Subst // Subst = undecaprenol Status: predicted in silico
Confirmation methods: Sequencing (gene, protein) ID: 3692 Notes: gene cluster name: KL82,, PSgc3; pyranyltransferase | Organism (ID 7727): Acinetobacter baumannii LUH5534 Exact full structure is unknown Molecule role: CPS | |
| Enzyme name: WzyK57 Enzyme GenBank ID: ARR95888.1 Gene name: wzy Gene cluster ID: KY434631.1 | Synthesized dimer: aDGalpN(1-3)bDQuip4N Donor (ID 36384): Ac(1-4)bDQuip4N(1-3)[aDGlcp(1-6),Ac(1-2)]aDGalpN(1-4)[Ac(1-2)]aDGalpN(1-3)[Ac(1-2)]aDGalpN(1-P-P-1)Subst // Subst = undecaprenol Acceptor (ID 36385): -3)[Ac(1-4)]bDQuip4N(1-3)[aDGlcp(1-6),Ac(1-2)]aDGalpN(1-4)[Ac(1-2)]aDGalpN(1-3)[Ac(1-2)]aDGalpN(1- Status: predicted in silico
Confirmation methods: Sequencing (gene, protein) ID: 3693 Notes: gene cluster name: KL57 | Organism (ID 7730): Acinetobacter baumannii BAL_212 Full structure (ID 2086): CSDB ID(s): 494, 6742, 12920, 27754, 30935 Molecule role: CPS | Kenyon et al. 2018 DOI: 10.1099/mic.0.000598 |
| Enzyme name: ItrA2K57 Enzyme GenBank ID: ARR95891.1 Gene name: itrA2 Gene cluster ID: KY434631.1 | Synthesized dimer: P(?-?)P Donor (ID 35669): Ac(1-2)?DGalpN(1-P-P-5)xXnucU Acceptor (ID 35735): P-1)Subst // Subst = undecaprenol Status: predicted in silico
Confirmation methods: Sequencing (gene, protein) ID: 3694 Notes: gene cluster name: KL57, phosphoglycosyltransferase; name was augmented to make it unique | Organism (ID 7730): Acinetobacter baumannii BAL_212 Exact full structure is unknown Molecule role: CPS | |
| Enzyme name: Gtr50K57 Enzyme GenBank ID: ARR95890.1 Gene name: gtr50 Gene cluster ID: KY434631.1 | Synthesized dimer: aDGalpN(1-3)aDGalpN Donor (ID 35669): Ac(1-2)?DGalpN(1-P-P-5)xXnucU Acceptor (ID 36250): Ac(1-2)aDGalpN(1-P-P-1)Subst // Subst = undecaprenol Status: predicted in silico
Confirmation methods: Sequencing (gene, protein) ID: 3695 Notes: gene cluster name: KL57; name was augmented to make it unique | Organism (ID 7730): Acinetobacter baumannii BAL_212 Full structure (ID 2086): CSDB ID(s): 494, 6742, 12920, 27754, 30935 Molecule role: CPS | |
| Enzyme name: Gtr117 Enzyme GenBank ID: ARR95889.1 Gene name: gtr117 Gene cluster ID: KY434631.1 | Synthesized dimer: aDGalpN(1-4)aDGalpN Donor (ID 35669): Ac(1-2)?DGalpN(1-P-P-5)xXnucU Acceptor (ID 36386): Ac(1-2)aDGalpN(1-3)[Ac(1-2)]aDGalpN(1-P-P-1)Subst // Subst = undecaprenol Status: predicted in silico
Confirmation methods: Sequencing (gene, protein) ID: 3696 Notes: gene cluster name: KL57 | Organism (ID 7730): Acinetobacter baumannii BAL_212 Full structure (ID 2086): CSDB ID(s): 494, 6742, 12920, 27754, 30935 Molecule role: CPS | |
| Enzyme name: Gtr116 Enzyme GenBank ID: ARR95887.1 Gene name: gtr116 Gene cluster ID: KY434631.1 | Synthesized dimer: aDGlcp(1-6)aDGalpN Donor (ID 34839): ?DGlcp(1-P-P-5)xXnucU Acceptor (ID 36387): Ac(1-2)aDGalpN(1-4)[Ac(1-2)]aDGalpN(1-3)[Ac(1-2)]aDGalpN(1-P-P-1)Subst // Subst = undecaprenol Status: predicted in silico
Confirmation methods: Sequencing (gene, protein) ID: 3697 Notes: gene cluster name: KL57 | Organism (ID 7730): Acinetobacter baumannii BAL_212 Full structure (ID 2086): CSDB ID(s): 494, 6742, 12920, 27754, 30935 Molecule role: CPS | |
| Enzyme name: Gtr115 Enzyme GenBank ID: ARR95886.1 Gene name: gtr115 Gene cluster ID: KY434631.1 | Synthesized dimer: bDQuip4N(1-3)aDGalpN Donor (ID 36388): Ac(1-4)?DQuip4N(1-P-P-5)xXnucU Acceptor (ID 36389): aDGlcp(1-6)[Ac(1-2)]aDGalpN(1-4)[Ac(1-2)]aDGalpN(1-3)[Ac(1-2)]aDGalpN(1-P-P-1)Subst // Subst = undecaprenol Status: predicted in silico
Confirmation methods: Sequencing (gene, protein) ID: 3698 Notes: gene cluster name: KL57 | Organism (ID 7730): Acinetobacter baumannii BAL_212 Full structure (ID 2086): CSDB ID(s): 494, 6742, 12920, 27754, 30935 Molecule role: CPS | |
| Enzyme name: ItrA1K53 Enzyme GenBank ID: AWL83836.1 Gene name: itrA1 Gene cluster ID: MH190222 | Synthesized dimer: P(?-?)P Donor (ID 36294): Ac(1-2)[Ac(1-4)]?DQuipN(1-P-P-5)xXnucU Acceptor (ID 35735): P-1)Subst // Subst = undecaprenol Status: predicted in silico
Confirmation methods: Sequencing (gene, protein) ID: 3699 Notes: gene cluster name: KL53, phosphoglycosyltransferase; name was augmented to make it unique | Organism (ID 17016): Acinetobacter baumannii D23 Full structure (ID 36390): Molecule role: CPS | Shashkov et al. 2018 DOI: 10.1099/mic.0.000710 |
| Enzyme name: WzyK53 Enzyme GenBank ID: AWL83834 Gene name: wzy Gene cluster ID: MH190222 | Synthesized dimer: bDQuipN4N(1-3)aDGalpNA Donor (ID 36391): Ac(1-2)[55%Ac(1-4)]aDGalpNA(1-3)[Ac(1-4),Ac(1-2)]bDQuipN4N(1-P-P-1)Subst // Subst = undecaprenol Acceptor (ID 36392): -3)[55%Ac(1-4),Ac(1-2)]aDGalpNA(1-3)[Ac(1-4),Ac(1-2)]bDQuipN4N(1- Status: predicted in silico
Confirmation methods: Sequencing (gene, protein) ID: 3700 Notes: gene cluster name: KL53 | Organism (ID 17016): Acinetobacter baumannii D23 Full structure (ID 13174): CSDB ID(s): 6706, 12977 Molecule role: CPS | |
| Enzyme name: Gtr2K53 Enzyme GenBank ID: AWL83835 Gene name: gtr2 Gene cluster ID: MH190222 | Synthesized dimer: aDGalpNA(1-3)bDQuipN4N Donor (ID 36216): Ac(1-2)?DGalpNA(1-P-P-5)xXnucU Acceptor (ID 36298): bDQuipN4N(1-P-P-1)Subst // Subst = undecaprenol Status: predicted in silico
Confirmation methods: Sequencing (gene, protein) ID: 3701 Notes: gene cluster name: KL53; name was augmented to make it unique | Organism (ID 17016): Acinetobacter baumannii D23 Full structure (ID 13174): CSDB ID(s): 6706, 12977 Molecule role: CPS | |
| Enzyme name: Atr18 Enzyme GenBank ID: AWL83832 Gene name: atr18 Gene cluster ID: MH190222 | Synthesized dimer: Ac(1-4)aDGalpNA Acceptor (ID 36355): Ac(1-2)aDGalpNA(1-3)[Ac(1-4),Ac(1-2)]bDQuipN4N(1-P-P-1)Subst // Subst = undecaprenol Status: predicted in silico
Confirmation methods: Sequencing (gene, protein) ID: 3702 Notes: gene cluster name: KL53 | Organism (ID 17016): Acinetobacter baumannii D23 Full structure (ID 13174): CSDB ID(s): 6706, 12977 Molecule role: CPS | |
| Enzyme name: WzyK5 Enzyme GenBank ID: DAC80234.1 Gene name: wzyK5 Gene cluster ID: CU468230.2 | Synthesized dimer: bDGalpN(1-3)aDGalp Donor (ID 36393): Ac(1-4)[Ac(1-7),Ac(1-5)]aXLegp(2-6)aDGalp(1-6)[Ac(1-2)]aDGlcpN(1-3)[Ac(1-2)]bDGalpN Acceptor (ID 36394): -3)[Ac(1-4)[Ac(1-7),Ac(1-5)]aXLegp(2-6)]aDGalp(1-6)[Ac(1-2)]aDGlcpN(1-3)[Ac(1-2)]bDGalpN(1- Status: predicted in silico
Confirmation methods: Sequencing (gene, protein) ID: 3703 Notes: gene cluster name: KL5 | Organism (ID 17017): Acinetobacter baumannii SDF Full structure (ID 13573): CSDB ID(s): 1102, 1180, 6713 Molecule role: CPS | Arbatsky et al. 2019a DOI: 10.1007/s11172-019-2432-4 |
| Enzyme name: Gtr15K5 Enzyme GenBank ID: CAO99490.1 Gene name: gtr15 Gene cluster ID: CU468230.2 | Synthesized dimer: aDGlcpN(1-3)bDGalpN Donor (ID 35226): Ac(1-2)?DGlcpN(1-P-P-5)xXnucU Acceptor (ID 36203): Ac(1-2)bDGalpN Status: predicted in silico
Confirmation methods: Sequencing (gene, protein) ID: 3704 Notes: gene cluster name: KL5; name was augmented to make it unique | Organism (ID 17017): Acinetobacter baumannii SDF Full structure (ID 13573): CSDB ID(s): 1102, 1180, 6713 Molecule role: CPS | |
| Enzyme name: Gtr14KL5 Enzyme GenBank ID: CAO99489.1 Gene name: gtr14 Gene cluster ID: CU468230.2 | Synthesized dimer: aDGalp(1-6)aDGlcpN Donor (ID 35273): ?DGalp(1-P-P-5)xXnucU Acceptor (ID 36395): Ac(1-2)aDGlcpN(1-3)[Ac(1-2)]bDGalpN Status: predicted in silico
Confirmation methods: Sequencing (gene, protein) ID: 3705 Notes: gene cluster name: KL5; name was augmented to make it unique | Organism (ID 17017): Acinetobacter baumannii SDF Full structure (ID 13573): CSDB ID(s): 1102, 1180, 6713 Molecule role: CPS | |
| Enzyme name: Gtr13KL5 Enzyme GenBank ID: CAO99488.1 Gene name: gtr13 Gene cluster ID: CU468230.2 | Synthesized dimer: aLegp(2-6)aDGalp Donor (ID 36318): Ac(1-5)[Ac(1-7)]?XLegp(2-P-5)xXnucC Acceptor (ID 36396): aDGalp(1-6)[Ac(1-2)]aDGlcpN(1-3)[Ac(1-2)]bDGalpN Status: predicted in silico
Confirmation methods: Sequencing (gene, protein) ID: 3706 Notes: gene cluster name: KL5; name was augmented to make it unique | Organism (ID 17017): Acinetobacter baumannii SDF Full structure (ID 13573): CSDB ID(s): 1102, 1180, 6713 Molecule role: CPS | |
| Enzyme name: WzyK7 Enzyme GenBank ID: AHB32215.1 Gene name: wzyK7 | Synthesized dimer: bDGalpN(1-3)aDGlcpN Donor (ID 36397): Ac(1-5)[Ac(1-7)]aXLegp(2-6)aDGalp(1-6)[Ac(1-2)]aDGlcpN(1-3)[Ac(1-2)]bDGalpN Acceptor (ID 36398): -3)[Ac(1-5)[Ac(1-7)]aXLegp(2-6)aDGalp(1-6),Ac(1-2)]aDGlcpN(1-3)[Ac(1-2)]bDGalpN(1- Status: predicted in silico
Confirmation methods: Sequencing (gene, protein) ID: 3707 Notes: gene cluster name: KL7, PSgc1 | Organism (ID 6966): Acinetobacter baumannii LUH5533 Full structure (ID 12015): CSDB ID(s): 963, 2272, 6705, 30673 Molecule role: CPS | Arbatsky et al. 2019a DOI: 10.1007/s11172-019-2432-4 Shashkov et al. 2015b DOI: 10.1007/s11172-015-1000-9 |
| Enzyme name: Gtr15K7 Enzyme GenBank ID: APD17031.1 Gene name: gtr15 | Synthesized dimer: aDGlcpN(1-3)bDGalpN Donor (ID 35226): Ac(1-2)?DGlcpN(1-P-P-5)xXnucU Acceptor (ID 36203): Ac(1-2)bDGalpN Status: predicted in silico
Confirmation methods: Sequencing (gene, protein) ID: 3708 Notes: gene cluster name: KL7, PSgc1; name was augmented to make it unique | Organism (ID 6966): Acinetobacter baumannii LUH5533 Full structure (ID 12015): CSDB ID(s): 963, 2272, 6705, 30673 Molecule role: CPS | Arbatsky et al. 2019a DOI: 10.1007/s11172-019-2432-4 |
| Enzyme name: Gtr14K7 Enzyme GenBank ID: APD17030.1 Gene name: gtr14 | Synthesized dimer: aDGalp(1-6)aDGlcpN Donor (ID 35273): ?DGalp(1-P-P-5)xXnucU Acceptor (ID 36395): Ac(1-2)aDGlcpN(1-3)[Ac(1-2)]bDGalpN Status: predicted in silico
Confirmation methods: Sequencing (gene, protein) ID: 3709 Notes: gene cluster name: KL7, PSgc1; name was augmented to make it unique | Organism (ID 6966): Acinetobacter baumannii LUH5533 Full structure (ID 12015): CSDB ID(s): 963, 2272, 6705, 30673 Molecule role: CPS | |
| Enzyme name: Gtr13K7 Enzyme GenBank ID: ASY01593.1 Gene name: gtr13 | Synthesized dimer: aLegp(2-6)aDGalp Donor (ID 36318): Ac(1-5)[Ac(1-7)]?XLegp(2-P-5)xXnucC Acceptor (ID 36396): aDGalp(1-6)[Ac(1-2)]aDGlcpN(1-3)[Ac(1-2)]bDGalpN Status: predicted in silico
Confirmation methods: Sequencing (gene, protein) ID: 3710 Notes: gene cluster name: KL7, PSgc1; name was augmented to make it unique | Organism (ID 6966): Acinetobacter baumannii LUH5533 Full structure (ID 12015): CSDB ID(s): 963, 2272, 6705, 30673 Molecule role: CPS | |
| Enzyme name: ItrA3K54 Enzyme GenBank ID: AWJ68090.1 Gene name: itrA3 Gene cluster ID: MG867726.1 | Synthesized dimer: P(?-?)P Donor (ID 35226): Ac(1-2)?DGlcpN(1-P-P-5)xXnucU Acceptor (ID 35735): P-1)Subst // Subst = undecaprenol Status: predicted in silico
Confirmation methods: Sequencing (gene, protein) ID: 3711 Notes: gene cluster name: KL54, phosphoglycosyltransferase; name was augmented to make it unique | Organism (ID 17018): Acinetobacter baumannii RCH52 Full structure (ID 36399): Molecule role: CPS | Arbatsky et al. 2019b DOI: 10.1016/j.carres.2019.107745 |
| Enzyme name: WzyK54 Enzyme GenBank ID: AWJ68082.1 Gene name: wzy Gene cluster ID: MG867726.1 | Synthesized dimer: bDGlcpN(1-4)aDGalpN Donor (ID 36400): Ac(1-5)[Ac(1-7)]aXLegp(2-6)[Ac(1-2)]aDGalpN(1-3)[Ac(1-2)]aLFucpN(1-3)[Ac(1-2)]bDGlcpN(1-P-P-1)Subst // Subst = undecaprenol Acceptor (ID 36401): -4)[Ac(1-5)[Ac(1-7)]aXLegp(2-6),Ac(1-2)]aDGalpN(1-3)[Ac(1-2)]aLFucpN(1-3)[Ac(1-2)]bDGlcpN(1- Status: predicted in silico
Confirmation methods: Sequencing (gene, protein) ID: 3712 Notes: gene cluster name: KL54 | Organism (ID 17018): Acinetobacter baumannii RCH52 Full structure (ID 13570): CSDB ID(s): 1178, 6723 Molecule role: CPS | |
| Enzyme name: Gtr20K54 Enzyme GenBank ID: AWJ68087.1 Gene name: gtr20 Gene cluster ID: MG867726.1 | Synthesized dimer: aLFucpN(1-3)bDGlcpN Donor (ID 36213): Ac(1-2)?LFucpN(1-P-P-5)xXnucU Acceptor (ID 36280): Ac(1-2)bDGlcpN(1-P-P-1)Subst // Subst = undecaprenol Status: predicted in silico
Confirmation methods: Sequencing (gene, protein) ID: 3713 Notes: gene cluster name: KL54; name was augmented to make it unique | Organism (ID 17018): Acinetobacter baumannii RCH52 Full structure (ID 13570): CSDB ID(s): 1178, 6723 Molecule role: CPS | |
| Enzyme name: Gtr19K54 Enzyme GenBank ID: AWJ68083. 1 Gene name: gtr19 Gene cluster ID: MG867726.1 | Synthesized dimer: aDGalpN(1-3)aLFucpN Donor (ID 35669): Ac(1-2)?DGalpN(1-P-P-5)xXnucU Acceptor (ID 36402): Ac(1-2)aLFucpN(1-3)[Ac(1-2)]bDGlcpN(1-P-P-1)Subst // Subst = undecaprenol Status: predicted in silico
Confirmation methods: Sequencing (gene, protein) ID: 3714 Notes: gene cluster name: KL54; name was augmented to make it unique | Organism (ID 17018): Acinetobacter baumannii RCH52 Full structure (ID 13570): CSDB ID(s): 1178, 6723 Molecule role: CPS | |
| Enzyme name: Gtr109 Enzyme GenBank ID: AWJ68081.1 Gene name: gtr109 Gene cluster ID: MG867726.1 | Synthesized dimer: aLegp(2-6)aDGalpN Donor (ID 36318): Ac(1-5)[Ac(1-7)]?XLegp(2-P-5)xXnucC Acceptor (ID 36403): Ac(1-2)aDGalpN(1-3)[Ac(1-2)]aLFucpN(1-3)[Ac(1-2)]bDGlcpN(1-P-P-1)Subst // Subst = undecaprenol Status: predicted in silico
Confirmation methods: Sequencing (gene, protein) ID: 3715 Notes: gene cluster name: KL54 | Organism (ID 17018): Acinetobacter baumannii RCH52 Full structure (ID 13570): CSDB ID(s): 1178, 6723 Molecule role: CPS | |
| Enzyme name: ItrA3K8 Enzyme GenBank ID: AQQ74355.1 Gene name: itrA3 Gene cluster ID: KX712116.1 | Synthesized dimer: P(?-?)P Donor (ID 35226): Ac(1-2)?DGlcpN(1-P-P-5)xXnucU Acceptor (ID 35735): P-1)Subst // Subst = undecaprenol Status: predicted in silico
Confirmation methods: Sequencing (gene, protein) ID: 3716 Notes: gene cluster name: KL8, phosphoglycosyltransferase; name was augmented to make it unique | Organism (ID 17019): Acinetobacter baumannii BAL 097 Full structure (ID 36399): Molecule role: CPS | |
| Enzyme name: WzyK8 Enzyme GenBank ID: AQQ74334.1 Gene name: wzy Gene cluster ID: KX712116.1 | Synthesized dimer: bDGlcpN(1-3)aDGalpN Donor (ID 36404): Ac(1-5)[<<75%lR3HOBut(1-7)|25%Ac(1-7)>>]aXLegp(2-6)[Ac(1-2)]aDGalpN(1-3)[Ac(1-2)]aLFucpN(1-3)[Ac(1-2)]bDGlcpN(1-P-P-1)Subst // Subst = undecaprenol Acceptor (ID 36405): -3)[Ac(1-5)[<<75%lR3HOBut(1-7)|25%Ac(1-7)>>]aXLegp(2-6),Ac(1-2)]aDGalpN(1-3)[Ac(1-2)]aLFucpN(1-3)[Ac(1-2)]bDGlcpN(1- Status: predicted in silico
Confirmation methods: Sequencing (gene, protein) ID: 3717 Notes: gene cluster name: KL8 | Organism (ID 17019): Acinetobacter baumannii BAL 097 Full structure (ID 13565): CSDB ID(s): 961, 6724 Molecule role: CPS | |
| Enzyme name: Gtr20K8 Enzyme GenBank ID: AQQ74352.1 Gene name: gtr20 Gene cluster ID: KX712116.1 | Synthesized dimer: aLFucpN(1-3)bDGlcpN Donor (ID 36213): Ac(1-2)?LFucpN(1-P-P-5)xXnucU Acceptor (ID 36280): Ac(1-2)bDGlcpN(1-P-P-1)Subst // Subst = undecaprenol Status: predicted in silico
Confirmation methods: Sequencing (gene, protein) ID: 3718 Notes: gene cluster name: KL8; name was augmented to make it unique | Organism (ID 17019): Acinetobacter baumannii BAL 097 Full structure (ID 13565): CSDB ID(s): 961, 6724 Molecule role: CPS | |
| Enzyme name: Gtr19K8 Enzyme GenBank ID: AQQ74348.1 Gene name: gtr19 Gene cluster ID: KX712116.1 | Synthesized dimer: aDGalpN(1-3)aLFucpN Donor (ID 35669): Ac(1-2)?DGalpN(1-P-P-5)xXnucU Acceptor (ID 36402): Ac(1-2)aLFucpN(1-3)[Ac(1-2)]bDGlcpN(1-P-P-1)Subst // Subst = undecaprenol Status: predicted in silico
Confirmation methods: Sequencing (gene, protein) ID: 3719 Notes: gene cluster name: KL8; name was augmented to make it unique | Organism (ID 17019): Acinetobacter baumannii BAL 097 Full structure (ID 13565): CSDB ID(s): 961, 6724 Molecule role: CPS | |
| Enzyme name: Gtr18 Enzyme GenBank ID: AQQ74347.1 Gene name: gtr18 Gene cluster ID: KX712116.1 | Synthesized dimer: aLegp(2-6)aDGalpN Donor (ID 36318): Ac(1-5)[Ac(1-7)]?XLegp(2-P-5)xXnucC Acceptor (ID 36403): Ac(1-2)aDGalpN(1-3)[Ac(1-2)]aLFucpN(1-3)[Ac(1-2)]bDGlcpN(1-P-P-1)Subst // Subst = undecaprenol Status: predicted in silico
Confirmation methods: Sequencing (gene, protein) ID: 3720 Notes: gene cluster name: KL8 | Organism (ID 17019): Acinetobacter baumannii BAL 097 Full structure (ID 13565): CSDB ID(s): 961, 6724 Molecule role: CPS | |
| Synthesized dimer: aLegp(2-6)aDGalpN Donor (ID 36320): lR3HOBut(1-7)[Ac(1-5)]?XLegp(2-P-5)xXnucC Acceptor (ID 36403): Ac(1-2)aDGalpN(1-3)[Ac(1-2)]aLFucpN(1-3)[Ac(1-2)]bDGlcpN(1-P-P-1)Subst // Subst = undecaprenol Status: predicted in silico
Confirmation methods: Sequencing (gene, protein) ID: 3721 Notes: gene cluster name: KL8 | Organism (ID 17019): Acinetobacter baumannii BAL 097 Full structure (ID 13565): CSDB ID(s): 961, 6724 Molecule role: CPS | ||
| Enzyme name: WzyK9 Enzyme GenBank ID: AGK45066.1 Gene name: wzy | Synthesized dimer: bDGlcpN(1-3)aDGalpNA Donor (ID 36406): Ac(1-2)aLFucpN(1-4)[Ac(1-2)]aDGalpNA(1-3)[Ac(1-2)]aLFucpN(1-3)[Ac(1-2)]bDGlcpN Acceptor (ID 36215): -3)[Ac(1-2)aLFucpN(1-4),Ac(1-2)]aDGalpNA(1-3)[Ac(1-2)]aLFucpN(1-3)[Ac(1-2)]bDGlcpN(1- Status: predicted in silico
Confirmation methods: Sequencing (gene, protein) ID: 3722 Notes: gene cluster name: KL9 | Organism (ID 16991): Acinetobacter baumannii LUH3484 Full structure (ID 726): CSDB ID(s): 487, 5524, 6719, 8543, 25168, 27744, 29553, 30926 Molecule role: CPS | |
| Enzyme name: ItrA2K128 Enzyme GenBank ID: QBM04742.1 Gene name: itrA2 Gene cluster ID: MK399428.1 | Synthesized dimer: P(?-?)P Donor (ID 35669): Ac(1-2)?DGalpN(1-P-P-5)xXnucU Acceptor (ID 35735): P-1)Subst // Subst = undecaprenol Status: predicted in silico
Confirmation methods: Sequencing (gene, protein) ID: 3723 Notes: gene cluster name: KL128, phosphoglycosyltransferase; there is a discrepancy in the naming of the protein in the article and NIH protein database; name was augmented to make it unique | Organism (ID 17020): Acinetobacter baumannii KZ-1093 Full structure (ID 36407): Molecule role: CPS | Arbatsky et al. 2019c DOI: 10.1016/j.carres.2019.107814 |
| Enzyme name: WzyK128 Enzyme GenBank ID: QBM04739.1 Gene name: wzy Gene cluster ID: MK399428.1 | Synthesized dimer: bDGalpN(1-4)aDGalp Donor (ID 36408): bDGlcp(1-6)[Ac(1-2)]bDGalpN(1-6)aDGalp(1-6)bDGalp(1-3)[Ac(1-2)]bDGalpN(1-P-P-1)Subst // Subst = undecaprenol Acceptor (ID 36409): -4)[bDGlcp(1-6)[Ac(1-2)]bDGalpN(1-6)]aDGalp(1-6)bDGalp(1-3)[Ac(1-2)]bDGalpN(1- Status: predicted in silico
Confirmation methods: Sequencing (gene, protein) ID: 3724 Notes: gene cluster name: KL128 | Organism (ID 17020): Acinetobacter baumannii KZ-1093 Full structure (ID 13571): CSDB ID(s): 962, 6711, 9190, 20817 Molecule role: CPS | |
| Enzyme name: Gtr5K128 Enzyme GenBank ID: QBM04741.1 Gene name: gtr5 Gene cluster ID: MK399428.1 | Synthesized dimer: bDGalp(1-3)bDGalpN Donor (ID 35273): ?DGalp(1-P-P-5)xXnucU Acceptor (ID 36235): Ac(1-2)bDGalpN(1-P-P-1)Subst // Subst = undecaprenol Status: predicted in silico
Confirmation methods: Sequencing (gene, protein) ID: 3725 Notes: gene cluster name: KL128; name was augmented to make it unique | Organism (ID 17020): Acinetobacter baumannii KZ-1093 Full structure (ID 13571): CSDB ID(s): 962, 6711, 9190, 20817 Molecule role: CPS | |
| Enzyme name: Gtr25K128 Enzyme GenBank ID: QBM04740.1 Gene name: gtr25 Gene cluster ID: MK399428.1 | Synthesized dimer: aDGalp(1-6)bDGalp Donor (ID 35273): ?DGalp(1-P-P-5)xXnucU Acceptor (ID 36236): bDGalp(1-3)[Ac(1-2)]bDGalpN(1-P-P-1)Subst // Subst = undecaprenol Status: predicted in silico
Confirmation methods: Sequencing (gene, protein) ID: 3726 Notes: gene cluster name: KL128; name was augmented to make it unique | Organism (ID 17020): Acinetobacter baumannii KZ-1093 Full structure (ID 13571): CSDB ID(s): 962, 6711, 9190, 20817 Molecule role: CPS | |
| Enzyme name: Gtr200K128 Enzyme GenBank ID: QBM04738.1 Gene name: gtr200 Gene cluster ID: MK399428.1 | Synthesized dimer: bDGalpN(1-6)aDGalp Donor (ID 35669): Ac(1-2)?DGalpN(1-P-P-5)xXnucU Acceptor (ID 36324): aDGalp(1-6)bDGalp(1-3)[Ac(1-2)]bDGalpN(1-P-P-1)Subst // Subst = undecaprenol Status: predicted in silico
Confirmation methods: Sequencing (gene, protein) ID: 3727 Notes: gene cluster name: KL128; name was augmented to make it unique | Organism (ID 17020): Acinetobacter baumannii KZ-1093 Full structure (ID 13571): CSDB ID(s): 962, 6711, 9190, 20817 Molecule role: CPS | |
| Enzyme name: Gtr75K128 Enzyme GenBank ID: QBM04737.1 Gene name: gtr75 Gene cluster ID: MK399428.1 | Synthesized dimer: bDGlcp(1-6)bDGalpN Donor (ID 34839): ?DGlcp(1-P-P-5)xXnucU Acceptor (ID 36410): Ac(1-2)bDGalpN(1-4)aDGalp(1-6)bDGalp(1-3)[Ac(1-2)]bDGalpN(1-P-P-1)Subst // Subst = undecaprenol Status: predicted in silico
Confirmation methods: Sequencing (gene, protein) ID: 3728 Notes: gene cluster name: KL128; name was augmented to make it unique | Organism (ID 17020): Acinetobacter baumannii KZ-1093 Full structure (ID 13571): CSDB ID(s): 962, 6711, 9190, 20817 Molecule role: CPS | |
| Enzyme name: ItrA3K16 Enzyme GenBank ID: AUS94314.1 Gene name: itrA3 Gene cluster ID: MF522813 | Synthesized dimer: P(?-?)P Donor (ID 35226): Ac(1-2)?DGlcpN(1-P-P-5)xXnucU Acceptor (ID 35735): P-1)Subst // Subst = undecaprenol Status: predicted in silico
Confirmation methods: Sequencing (gene, protein) ID: 3729 Notes: gene cluster name: KL16, phosphoglycosyltransferase; name was augmented to make it unique | Organism (ID 17021): Acinetobacter baumannii ST25 Full structure (ID 36411): Molecule role: CPS | Kenyon et al. 2019a DOI: 10.1016/j.ijbiomac.2019.01.080 |
| Enzyme name: WzyK16 Enzyme GenBank ID: AUS94312.1 Gene name: wzy Gene cluster ID: MF522813 | Synthesized dimer: bDGlcpN(1-4)bPsep Donor (ID 36412): Ac(1-5)[Ac(1-7)]bXPsep(2-4)bDGalp(1-3)[Ac(1-2)]bDGlcpN(1-P-P-1)Subst // Subst = undecaprenol Acceptor (ID 36413): -4)[Ac(1-7),Ac(1-5)]bXPsep(2-4)bDGalp(1-3)[Ac(1-2)]bDGlcpN(1- Status: predicted in silico
Confirmation methods: Sequencing (gene, protein) ID: 3730 Notes: gene cluster name: KL16 | Organism (ID 17021): Acinetobacter baumannii ST25 Full structure (ID 13706): CSDB ID(s): 799, 6720 Molecule role: CPS | |
| Enzyme name: Gtr5K16 Enzyme GenBank ID: AUS94313.1 Gene name: gtr5 Gene cluster ID: MF522813 | Synthesized dimer: bDGalp(1-3)bDGlcpN Donor (ID 35273): ?DGalp(1-P-P-5)xXnucU Acceptor (ID 36280): Ac(1-2)bDGlcpN(1-P-P-1)Subst // Subst = undecaprenol Status: predicted in silico
Confirmation methods: Sequencing (gene, protein) ID: 3731 Notes: gene cluster name: KL16 | Organism (ID 17021): Acinetobacter baumannii ST25 Full structure (ID 13706): CSDB ID(s): 799, 6720 Molecule role: CPS | |
| Enzyme name: Gtr37 Enzyme GenBank ID: AUS94311.1 Gene name: gtr37 Gene cluster ID: MF522813 | Synthesized dimer: bPsep(2-4)bDGalp Donor (ID 36414): Ac(1-5)[Ac(1-7)]?XPsep(2-P-?)xXnucC Acceptor (ID 36415): bDGalp(1-3)[Ac(1-2)]bDGlcpN(1-P-P-1)Subst // Subst = undecaprenol Status: predicted in silico
Confirmation methods: Sequencing (gene, protein) ID: 3732 Notes: inverting GT, gene cluster name: KL16 | Organism (ID 17021): Acinetobacter baumannii ST25 Full structure (ID 13706): CSDB ID(s): 799, 6720 Molecule role: CPS | |
| Enzyme name: WzyK17 Enzyme GenBank ID: AIT75781.1 Gene name: wzy Gene cluster ID: KC118541.2 | Synthesized dimer: bDQuipN4N(1-4)aDGalpNA Donor (ID 36416): xDAla?(1-6)[Ac(1-2)]aDGalpNA(1-4)[Ac(1-2)]aDGalpNA(1-3)bDQuipN4N(1-P-P-1)Subst // Subst = undecaprenol Acceptor (ID 36417): -4)[xDAla?(1-6),Ac(1-2)]aDGalpNA(1-4)[Ac(1-2)]aDGalpNA(1-3)bDQuipN4N(1- Status: predicted in silico
Confirmation methods: Sequencing (gene, protein) ID: 3733 Notes: gene cluster name: KL17 | Organism (ID 17022): Acinetobacter baumannii G7 Exact full structure is unknown Molecule role: CPS | Kenyon et al. 2019b DOI: 10.1016/j.ijbiomac.2019.09.163 |
| Enzyme name: Gtr40K17 Enzyme GenBank ID: AIT75782.1 Gene name: gtr40 Gene cluster ID: KC118541.2 | Synthesized dimer: aDGalpNA(1-3)bDQuipN4N Donor (ID 36216): Ac(1-2)?DGalpNA(1-P-P-5)xXnucU Acceptor (ID 36298): bDQuipN4N(1-P-P-1)Subst // Subst = undecaprenol Status: predicted in silico
Confirmation methods: Sequencing (gene, protein) ID: 3734 Notes: gene cluster name: KL17; name was augmented to make it unique | Organism (ID 17022): Acinetobacter baumannii G7 Exact full structure is unknown Molecule role: CPS | |
| Enzyme name: Gtr39 Enzyme GenBank ID: AIT75780.1 Gene name: gtr39 Gene cluster ID: KC118541.2 | Synthesized dimer: aDGalpNA(1-4)aDGalpNA Donor (ID 36216): Ac(1-2)?DGalpNA(1-P-P-5)xXnucU Acceptor (ID 36303): Ac(1-2)aDGalpNA(1-3)bDQuipN4N(1-P-P-1)Subst // Subst = undecaprenol Status: predicted in silico
Confirmation methods: Sequencing (gene, protein) ID: 3735 Notes: gene cluster name: KL17 | Organism (ID 17022): Acinetobacter baumannii G7 Exact full structure is unknown Molecule role: CPS | |
| Enzyme name: Alt1 Enzyme GenBank ID: AIT75779.1 Gene name: alt1 Gene cluster ID: KC118541.2 | Synthesized dimer: DAla(1-6)aDGalpNA Acceptor (ID 36418): Ac(1-2)aDGalpNA(1-4)[Ac(1-2)]aDGalpNA(1-3)bDQuipN4N(1-P-P-1)Subst // Subst = undecaprenol Status: predicted in silico
Confirmation methods: Sequencing (gene, protein) ID: 3736 Notes: gene cluster name: KL17 | Organism (ID 17022): Acinetobacter baumannii G7 Exact full structure is unknown Molecule role: CPS | |
| Enzyme name: ItrA2K46 Enzyme GenBank ID: QDF13588.1 Gene name: ItrA2 Gene cluster ID: MK609549.1 | Synthesized dimer: P(?-?)P Donor (ID 35669): Ac(1-2)?DGalpN(1-P-P-5)xXnucU Acceptor (ID 35735): P-1)Subst // Subst = undecaprenol Status: predicted in silico
Confirmation methods: Sequencing (gene, protein) ID: 3737 Notes: gene cluster name: KL46, phosphoglycosyltransferase; name was augmented to make it unique | Organism (ID 17023): Acinetobacter baumannii NIPH 329 Full structure (ID 36419): Molecule role: CPS | Kenyon et al. 2019c DOI: 10.1371/journal.pone.0218461 |
| Enzyme name: WzyK46 Enzyme GenBank ID: QDF13585.1 Gene name: wzyK5 Gene cluster ID: MK609549.1 | Synthesized dimer: bDGalpN(1-3)aDGalp Donor (ID 36420): 75%Ac(1-4)[Ac(1-7),Ac(1-5)]bXPsep(2-6)aDGalp(1-6)[Ac(1-2)]aDGlcpN(1-3)[Ac(1-2)]bDGalpN(1-P-P-1)Subst // Subst = undecaprenol Acceptor (ID 36421): -3)[75%Ac(1-4)[Ac(1-7),Ac(1-5)]bXPsep(2-6)]aDGalp(1-6)[Ac(1-2)]aDGlcpN(1-3)[Ac(1-2)]bDGalpN(1- Status: predicted in silico
Confirmation methods: Sequencing (gene, protein) ID: 3738 Notes: gene cluster name: KL46 | Organism (ID 17023): Acinetobacter baumannii NIPH 329 Full structure (ID 13710): CSDB ID(s): 1047, 21021 Molecule role: CPS | |
| Enzyme name: Gtr15K46 Enzyme GenBank ID: QDF13587.1 Gene name: gtr15 Gene cluster ID: MK609549.1 | Synthesized dimer: aDGlcpN(1-3)bDGalpN Donor (ID 35226): Ac(1-2)?DGlcpN(1-P-P-5)xXnucU Acceptor (ID 36235): Ac(1-2)bDGalpN(1-P-P-1)Subst // Subst = undecaprenol Status: predicted in silico
Confirmation methods: Sequencing (gene, protein) ID: 3739 Notes: gene cluster name: KL46; name was augmented to make it unique | Organism (ID 17023): Acinetobacter baumannii NIPH 329 Full structure (ID 13710): CSDB ID(s): 1047, 21021 Molecule role: CPS | |
| Enzyme name: Gtr14KL46 Enzyme GenBank ID: QDF13586.1 Gene name: gtr14 Gene cluster ID: MK609549.1 | Synthesized dimer: aDGalp(1-6)aDGlcpN Donor (ID 35273): ?DGalp(1-P-P-5)xXnucU Acceptor (ID 36422): Ac(1-2)aDGlcpN(1-3)[Ac(1-2)]bDGalpN(1-P-P-1)Subst // Subst = undecaprenol Status: predicted in silico
Confirmation methods: Sequencing (gene, protein) ID: 3740 Notes: gene cluster name: KL46; name was augmented to make it unique | Organism (ID 17023): Acinetobacter baumannii NIPH 329 Full structure (ID 13710): CSDB ID(s): 1047, 21021 Molecule role: CPS | |
| Enzyme name: Gtr94 Enzyme GenBank ID: ENW42232.1 Gene name: gtr94 Gene cluster ID: MK609549.1 | Synthesized dimer: bPsep(2-6)aDGalp Donor (ID 36237): Ac(1-5)[Ac(1-7)]?XPsep(2-P-5)xXnucC Acceptor (ID 36423): aDGalp(1-6)[Ac(1-2)]aDGlcpN(1-3)[Ac(1-2)]bDGalpN(1-P-P-1)Subst // Subst = undecaprenol Status: predicted in silico
Confirmation methods: Sequencing (gene, protein) ID: 3741 Notes: gene cluster name: KL46 | Organism (ID 17023): Acinetobacter baumannii NIPH 329 Full structure (ID 13710): CSDB ID(s): 1047, 21021 Molecule role: CPS | |
| Synthesized dimer: bPsep(2-6)aDGalp Donor (ID 36267): lR3HOBut(1-7)[Ac(1-5)]?XPsep(2-P-5)xXnucC Acceptor (ID 36423): aDGalp(1-6)[Ac(1-2)]aDGlcpN(1-3)[Ac(1-2)]bDGalpN(1-P-P-1)Subst // Subst = undecaprenol Status: predicted in silico
Confirmation methods: Sequencing (gene, protein) ID: 3742 Notes: gene cluster name: KL46 | Organism (ID 17023): Acinetobacter baumannii NIPH 329 Full structure (ID 13710): CSDB ID(s): 1047, 21021 Molecule role: CPS | ||
| Enzyme name: Atr29 Enzyme GenBank ID: ENW41154.1 Gene name: atr29 | Synthesized dimer: Ac(1-4)bPsep Acceptor (ID 36420): 75%Ac(1-4)[Ac(1-7),Ac(1-5)]bXPsep(2-6)aDGalp(1-6)[Ac(1-2)]aDGlcpN(1-3)[Ac(1-2)]bDGalpN(1-P-P-1)Subst // Subst = undecaprenol Status: predicted in silico
Confirmation methods: Sequencing (gene, protein) ID: 3743 Notes: gene cluster name: KL46 | Organism (ID 17023): Acinetobacter baumannii NIPH 329 Full structure (ID 13710): CSDB ID(s): 1047, 21021 Molecule role: CPS | |
| Enzyme name: ItrA3K90 Enzyme GenBank ID: AHB32796.2 Gene name: itrA3 Gene cluster ID: KC526917.1 | Synthesized dimer: P(?-?)P Donor (ID 35226): Ac(1-2)?DGlcpN(1-P-P-5)xXnucU Acceptor (ID 35735): P-1)Subst // Subst = undecaprenol Status: predicted in silico
Confirmation methods: Sequencing (gene, protein) ID: 3744 Notes: gene cluster name: KL90, PSgc26, phosphoglycosyltransferase; name was augmented to make it unique | Organism (ID 16995): Acinetobacter baumannii LUH5553 Full structure (ID 36424): Molecule role: CPS | Senchenkova et al. 2019 DOI: 10.1016/j.carres.2019.04.008 |
| Enzyme name: WzyK90 Enzyme GenBank ID: AHB32799.1 Gene name: wzy Gene cluster ID: KC526917.1 | Synthesized dimer: bDGlcpN(1-3)aDGlcpN Donor (ID 36425): Ac(1-5)[Ac(1-7)]bXPsep(2-3)aDGalp(1-6)[Ac(1-2)]aDGlcpN(1-3)[Ac(1-2)]bDGlcpN(1-P-P-1)Subst // Subst = undecaprenol Acceptor (ID 36426): -3)[Ac(1-5)[Ac(1-7)]bXPsep(2-3)aDGalp(1-6),Ac(1-2)]aDGlcpN(1-3)[Ac(1-2)]bDGlcpN(1- Status: predicted in silico
Confirmation methods: Sequencing (gene, protein) ID: 3745 Notes: gene cluster name: KL90, PSgc26 | Organism (ID 16995): Acinetobacter baumannii LUH5553 Full structure (ID 13908): CSDB ID(s): 2273, 6704 Molecule role: CPS | |
| Enzyme name: Gtr15K90 Enzyme GenBank ID: AHB32797.1 Gene name: gtr15 Gene cluster ID: KC526917.1 | Synthesized dimer: aDGlcpN(1-3)bDGlcpN Donor (ID 35226): Ac(1-2)?DGlcpN(1-P-P-5)xXnucU Acceptor (ID 36280): Ac(1-2)bDGlcpN(1-P-P-1)Subst // Subst = undecaprenol Status: predicted in silico
Confirmation methods: Sequencing (gene, protein) ID: 3746 Notes: gene cluster name: KL90, PSgc26; name was augmented to make it unique | Organism (ID 16995): Acinetobacter baumannii LUH5553 Full structure (ID 13908): CSDB ID(s): 2273, 6704 Molecule role: CPS | |
| Enzyme name: Gtr14K90 Enzyme GenBank ID: AHB32798.1 Gene name: gtr14 Gene cluster ID: KC526917.1 | Synthesized dimer: aDGalp(1-6)aDGlcpN Donor (ID 35273): ?DGalp(1-P-P-5)xXnucU Acceptor (ID 36427): Ac(1-2)aDGlcpN(1-3)[Ac(1-2)]bDGlcpN(1-P-P-1)Subst // Subst = undecaprenol Status: predicted in silico
Confirmation methods: Sequencing (gene, protein) ID: 3747 Notes: gene cluster name: KL90, PSgc26; name was augmented to make it unique | Organism (ID 16995): Acinetobacter baumannii LUH5553 Full structure (ID 13908): CSDB ID(s): 2273, 6704 Molecule role: CPS | |
| Enzyme name: Gtr163 Enzyme GenBank ID: AHB32800.1 Gene name: gtr163 Gene cluster ID: KC526917.1 | Synthesized dimer: bPsep(2-3)aDGalp Donor (ID 36237): Ac(1-5)[Ac(1-7)]?XPsep(2-P-5)xXnucC Acceptor (ID 36428): aDGalp(1-6)[Ac(1-2)]aDGlcpN(1-3)[Ac(1-2)]bDGlcpN(1-P-P-1)Subst // Subst = undecaprenol Status: predicted in silico
Confirmation methods: Sequencing (gene, protein) ID: 3748 Notes: gene cluster name: KL90, PSgc26 | Organism (ID 16995): Acinetobacter baumannii LUH5553 Full structure (ID 13908): CSDB ID(s): 2273, 6704 Molecule role: CPS | |
| Enzyme name: ItrA2K116 Enzyme GenBank ID: QBM04670.1 Gene name: itrA2 Gene cluster ID: MK399425.1 | Synthesized dimer: P(?-?)P Donor (ID 35669): Ac(1-2)?DGalpN(1-P-P-5)xXnucU Acceptor (ID 35735): P-1)Subst // Subst = undecaprenol Status: predicted in silico
Confirmation methods: Sequencing (gene, protein) ID: 3749 Notes: gene cluster name: KL116, phosphoglycosyltransferase; there is a discrepancy in the naming of the protein in the article and NIH protein database; name was augmented to make it unique | Organism (ID 17024): Acinetobacter baumannii MAR-303 Full structure (ID 36429): Molecule role: CPS | Shashkov et al. 2019 DOI: 10.1016/j.carres.2019.107774 |
| Enzyme name: WzyK116 Enzyme GenBank ID: QBM04667.1 Gene name: wzy Gene cluster ID: MK399425.1 | Synthesized dimer: bDGalpN(1-3)aDGalp Donor (ID 36430): bDGlcp(1-6)[Ac(1-2)]bDGalpN(1-4)aDGalp(1-6)bDGalp(1-3)[Ac(1-2)]bDGalpN(1-P-P-1)Subst // Subst = undecaprenol Acceptor (ID 36431): -3)[bDGlcp(1-6)[Ac(1-2)]bDGalpN(1-4)]aDGalp(1-6)bDGalp(1-3)[Ac(1-2)]bDGalpN(1- Status: predicted in silico
Confirmation methods: Sequencing (gene, protein) ID: 3750 Notes: gene cluster name: KL116 | Organism (ID 17024): Acinetobacter baumannii MAR-303 Full structure (ID 13572): CSDB ID(s): 1106, 1179, 6710, 9747, 10874, 20819 Molecule role: CPS | |
| Enzyme name: Gtr5K116 Enzyme GenBank ID: QBM04669.1 Gene name: gtr5 Gene cluster ID: MK399425.1 | Synthesized dimer: bDGalp(1-3)bDGalpN Donor (ID 35273): ?DGalp(1-P-P-5)xXnucU Acceptor (ID 36235): Ac(1-2)bDGalpN(1-P-P-1)Subst // Subst = undecaprenol Status: predicted in silico
Confirmation methods: Sequencing (gene, protein) ID: 3751 Notes: gene cluster name: KL116 | Organism (ID 17024): Acinetobacter baumannii MAR-303 Full structure (ID 13572): CSDB ID(s): 1106, 1179, 6710, 9747, 10874, 20819 Molecule role: CPS | |
| Enzyme name: Gtr25K116 Enzyme GenBank ID: QBM04668.1 Gene name: gtr25 Gene cluster ID: MK399425.1 | Synthesized dimer: aDGalp(1-6)bDGalp Donor (ID 35273): ?DGalp(1-P-P-5)xXnucU Acceptor (ID 36236): bDGalp(1-3)[Ac(1-2)]bDGalpN(1-P-P-1)Subst // Subst = undecaprenol Status: predicted in silico
Confirmation methods: Sequencing (gene, protein) ID: 3752 Notes: gene cluster name: KL116; name was augmented to make it unique | Organism (ID 17024): Acinetobacter baumannii MAR-303 Full structure (ID 13572): CSDB ID(s): 1106, 1179, 6710, 9747, 10874, 20819 Molecule role: CPS | |
| Enzyme name: Gtr76K116 Enzyme GenBank ID: QBM04666.1 Gene name: gtr76 Gene cluster ID: MK399425.1 | Synthesized dimer: bDGalpN(1-4)aDGalp Donor (ID 35669): Ac(1-2)?DGalpN(1-P-P-5)xXnucU Acceptor (ID 36324): aDGalp(1-6)bDGalp(1-3)[Ac(1-2)]bDGalpN(1-P-P-1)Subst // Subst = undecaprenol Status: predicted in silico
Confirmation methods: Sequencing (gene, protein) ID: 3753 Notes: gene cluster name: KL116; name was augmented to make it unique | Organism (ID 17024): Acinetobacter baumannii MAR-303 Full structure (ID 13572): CSDB ID(s): 1106, 1179, 6710, 9747, 10874, 20819 Molecule role: CPS | |
| Enzyme name: Gtr75K116 Enzyme GenBank ID: QBM04665.1 Gene name: gtr75 Gene cluster ID: MK399425.1 | Synthesized dimer: bDGlcp(1-6)bDGalpN Donor (ID 34839): ?DGlcp(1-P-P-5)xXnucU Acceptor (ID 36410): Ac(1-2)bDGalpN(1-4)aDGalp(1-6)bDGalp(1-3)[Ac(1-2)]bDGalpN(1-P-P-1)Subst // Subst = undecaprenol Status: predicted in silico
Confirmation methods: Sequencing (gene, protein) ID: 3754 Notes: gene cluster name: KL116; name was augmented to make it unique | Organism (ID 17024): Acinetobacter baumannii MAR-303 Full structure (ID 13572): CSDB ID(s): 1106, 1179, 6710, 9747, 10874, 20819 Molecule role: CPS | |
| Enzyme name: ItrA2K32 Enzyme GenBank ID: AHB32289.2 Gene name: itrA2 Gene cluster ID: KC526897.2 | Synthesized dimer: P(?-?)P Donor (ID 35669): Ac(1-2)?DGalpN(1-P-P-5)xXnucU Acceptor (ID 35735): P-1)Subst // Subst = undecaprenol Status: predicted in silico
Confirmation methods: Sequencing (gene, protein) ID: 3755 Notes: gene cluster name: KL32, PSgc21; phosphoglycosyltransferase; name was augmented to make it unique | Organism (ID 17025): Acinetobacter baumannii LUH5549 Full structure (ID 36432): Molecule role: CPS | Cahill et al. 2020 DOI: 10.1134/S000629792002011X |
| Enzyme name: WzyK32 Enzyme GenBank ID: AHB32283.1 Gene name: wzy Gene cluster ID: KC526897.2 | Synthesized dimer: bDGalpN(1-3)bDGalpN Donor (ID 36433): bDGlcp(1-6)[Ac(1-2)]aDGlcpN(1-4)[Ac(1-2)]bDGalpN(1-4)bDGlcpA(1-3)[Ac(1-2)]bDGalpN(1-P-P-1)Subst // Subst = undecaprenol Acceptor (ID 36434): -3)[bDGlcp(1-6)[Ac(1-2)]aDGlcpN(1-4),Ac(1-2)]bDGalpN(1-4)bDGlcpA(1-3)[Ac(1-2)]bDGalpN(1- Status: predicted in silico
Confirmation methods: Sequencing (gene, protein) ID: 3756 Notes: gene cluster name: KL32, PSgc21 | Organism (ID 17025): Acinetobacter baumannii LUH5549 Full structure (ID 14419): CSDB ID(s): 6717, 9735, 32069 Molecule role: CPS | |
| Enzyme name: Gtr70 Enzyme GenBank ID: AHB32285.1 Gene name: gtr70 Gene cluster ID: KC526897.2 | Synthesized dimer: bDGlcpA(1-3)bDGalpN Donor (ID 35444): ?DGlcpA(1-P-P-5)xXnucU Acceptor (ID 36235): Ac(1-2)bDGalpN(1-P-P-1)Subst // Subst = undecaprenol Status: predicted in silico
Confirmation methods: Sequencing (gene, protein) ID: 3757 Notes: inverting GT, gene cluster name: KL32, PSgc21 | Organism (ID 17025): Acinetobacter baumannii LUH5549 Full structure (ID 14419): CSDB ID(s): 6717, 9735, 32069 Molecule role: CPS | |
| Enzyme name: Gtr69 Enzyme GenBank ID: AHB32284.1 Gene name: gtr69 Gene cluster ID: KC526897.2 | Synthesized dimer: bDGalpN(1-4)bDGlcpA Donor (ID 35669): Ac(1-2)?DGalpN(1-P-P-5)xXnucU Acceptor (ID 36435): bDGlcpA(1-3)[Ac(1-2)]bDGalpN(1-P-P-1)Subst // Subst = undecaprenol Status: predicted in silico
Confirmation methods: Sequencing (gene, protein) ID: 3758 Notes: inverting GT, gene cluster name: KL32, PSgc21 | Organism (ID 17025): Acinetobacter baumannii LUH5549 Full structure (ID 14419): CSDB ID(s): 6717, 9735, 32069 Molecule role: CPS | |
| Enzyme name: Gtr68 Enzyme GenBank ID: AHB32282.2 CAZy family: GT4 Gene name: gtr68 Gene cluster ID: KC526897.2 | Synthesized dimer: aDGlcpN(1-4)bDGalpN Donor (ID 35226): Ac(1-2)?DGlcpN(1-P-P-5)xXnucU Acceptor (ID 36436): Ac(1-2)bDGalpN(1-4)bDGlcpA(1-3)[Ac(1-2)]bDGalpN(1-P-P-1)Subst // Subst = undecaprenol Status: predicted in silico
Confirmation methods: Sequencing (gene, protein) ID: 3759 Notes: retaining GT, gene cluster name: KL32, PSgc21 | Organism (ID 17025): Acinetobacter baumannii LUH5549 Full structure (ID 14419): CSDB ID(s): 6717, 9735, 32069 Molecule role: CPS | |
| Enzyme name: Gtr67 Enzyme GenBank ID: AHB32281.1 Gene name: gtr67 Gene cluster ID: KC526897.2 | Synthesized dimer: bDGlcp(1-6)aDGlcpN Donor (ID 34839): ?DGlcp(1-P-P-5)xXnucU Acceptor (ID 36437): Ac(1-2)aDGlcpN(1-4)[Ac(1-2)]bDGalpN(1-4)bDGlcpA(1-3)[Ac(1-2)]bDGalpN(1-P-P-1)Subst // Subst = undecaprenol Status: predicted in silico
Confirmation methods: Sequencing (gene, protein) ID: 3760 Notes: inverting GT, gene cluster name: KL32, PSgc21 | Organism (ID 17025): Acinetobacter baumannii LUH5549 Full structure (ID 14419): CSDB ID(s): 6717, 9735, 32069 Molecule role: CPS | |
| Enzyme name: WzyK55 Enzyme GenBank ID: QHE90311.1 Gene name: wzy Gene cluster ID: MN148383.1 | Synthesized dimer: bDGlcpN(1-3)aLRhap Donor (ID 36438): aLRhap(1-3)aLRhap(1-4)bDGlcpA(1-2)aLRhap(1-2)aLRhap(1-3)aLRhap(1-2)aLRhap(1-3)[Ac(1-2)]bDGlcpN(1-P-P-1)Subst // Subst = undecaprenol Acceptor (ID 36439): -3)[aLRhap(1-3)aLRhap(1-4)bDGlcpA(1-2)aLRhap(1-2)]aLRhap(1-3)aLRhap(1-2)aLRhap(1-3)[Ac(1-2)]bDGlcpN(1- Status: predicted in silico
Confirmation methods: Sequencing (gene, protein) ID: 3761 Notes: gene cluster name: KL55 | Organism (ID 17026): Acinetobacter baumannii BAL_204 Exact full structure is unknown Molecule role: CPS | Kenyon et al. 2020 DOI: 10.1016/j.ijbiomac.2020.11.005 |
| Enzyme name: Gtr82K55 Enzyme GenBank ID: QHE90313.1 Gene name: gtr82 Gene cluster ID: MN148383.1 | Synthesized dimer: aLRhap(1-3)bDGlcpN Donor (ID 35153): ?LRhap(1-P-P-5)xXnucdT Acceptor (ID 36280): Ac(1-2)bDGlcpN(1-P-P-1)Subst // Subst = undecaprenol Status: predicted in silico
Confirmation methods: Sequencing (gene, protein) ID: 3762 Notes: gene cluster name: KL55; name was augmented to make it unique | Organism (ID 17026): Acinetobacter baumannii BAL_204 Exact full structure is unknown Molecule role: CPS | |
| Enzyme name: Gtr112K55 Enzyme GenBank ID: QHE90312.1 Gene name: gtr112 Gene cluster ID: MN148383.1 | Synthesized dimer: aLRhap(1-2)aLRhap Donor (ID 35153): ?LRhap(1-P-P-5)xXnucdT Acceptor (ID 36440): aLRhap(1-3)[Ac(1-2)]bDGlcpN(1-P-P-1)Subst // Subst = undecaprenol Status: predicted in silico
Confirmation methods: Sequencing (gene, protein) ID: 3763 Notes: gene cluster name: KL55; name was augmented to make it unique | Organism (ID 17026): Acinetobacter baumannii BAL_204 Exact full structure is unknown Molecule role: CPS | |
| Synthesized dimer: aLRhap(1-3)aLRhap Donor (ID 35153): ?LRhap(1-P-P-5)xXnucdT Acceptor (ID 36441): aLRhap(1-2)aLRhap(1-3)[Ac(1-2)]bDGlcpN(1-P-P-1)Subst // Subst = undecaprenol Status: predicted in silico
Confirmation methods: Sequencing (gene, protein) ID: 3764 Notes: gene cluster name: KL55; name was augmented to make it unique | Organism (ID 17026): Acinetobacter baumannii BAL_204 Exact full structure is unknown Molecule role: CPS | ||
| Synthesized dimer: aLRhap(1-2)aLRhap Donor (ID 35153): ?LRhap(1-P-P-5)xXnucdT Acceptor (ID 36442): aLRhap(1-3)aLRhap(1-2)aLRhap(1-3)[Ac(1-2)]bDGlcpN(1-P-P-1)Subst // Subst = undecaprenol Status: predicted in silico
Confirmation methods: Sequencing (gene, protein) ID: 3765 Notes: gene cluster name: KL55; name was augmented to make it unique | Organism (ID 17026): Acinetobacter baumannii BAL_204 Exact full structure is unknown Molecule role: CPS | ||
| Enzyme name: Gtr111 Enzyme GenBank ID: QHE90310.1 Gene name: gtr111 Gene cluster ID: MN148383.1 | Synthesized dimer: bDGlcpA(1-2)aLRhap Donor (ID 35444): ?DGlcpA(1-P-P-5)xXnucU Acceptor (ID 36443): aLRhap(1-2)aLRhap(1-3)aLRhap(1-2)aLRhap(1-3)[Ac(1-2)]bDGlcpN(1-P-P-1)Subst // Subst = undecaprenol Status: predicted in silico
Confirmation methods: Sequencing (gene, protein) ID: 3766 Notes: gene cluster name: KL55 | Organism (ID 17026): Acinetobacter baumannii BAL_204 Exact full structure is unknown Molecule role: CPS | |
| Enzyme name: Gtr110KL55 Enzyme GenBank ID: QHE90302.1 Gene name: gtr110 Gene cluster ID: MN148383.1 | Synthesized dimer: aLRhap(1-4)bDGlcpA Donor (ID 35153): ?LRhap(1-P-P-5)xXnucdT Acceptor (ID 36444): bDGlcpA(1-2)aLRhap(1-2)aLRhap(1-3)aLRhap(1-2)aLRhap(1-3)[Ac(1-2)]bDGlcpN(1-P-P-1)Subst // Subst = undecaprenol Status: predicted in silico
Confirmation methods: Sequencing (gene, protein) ID: 3767 Notes: gene cluster name: KL55; name was augmented to make it unique | Organism (ID 17026): Acinetobacter baumannii BAL_204 Exact full structure is unknown Molecule role: CPS | |
| Enzyme name: Gtr79K55 Enzyme GenBank ID: QHE90303.1 Gene name: gtr79 Gene cluster ID: MN148383.1 | Synthesized dimer: aLRhap(1-3)aLRhap Donor (ID 35153): ?LRhap(1-P-P-5)xXnucdT Acceptor (ID 36445): aLRhap(1-4)bDGlcpA(1-2)aLRhap(1-2)aLRhap(1-3)aLRhap(1-2)aLRhap(1-3)[Ac(1-2)]bDGlcpN(1-P-P-1)Subst // Subst = undecaprenol Status: predicted in silico
Confirmation methods: Sequencing (gene, protein) ID: 3768 Notes: gene cluster name: KL55; name was augmented to make it unique | Organism (ID 17026): Acinetobacter baumannii BAL_204 Exact full structure is unknown Molecule role: CPS | |
| Enzyme name: WzyK74 Enzyme GenBank ID: QHE90354.1 Gene name: wzy Gene cluster ID: MN148381.1 | Synthesized dimer: bDGlcpN(1-3)bDGlcpA Donor (ID 36438): aLRhap(1-3)aLRhap(1-4)bDGlcpA(1-2)aLRhap(1-2)aLRhap(1-3)aLRhap(1-2)aLRhap(1-3)[Ac(1-2)]bDGlcpN(1-P-P-1)Subst // Subst = undecaprenol Acceptor (ID 36446): -3)[aLRhap(1-3)aLRhap(1-4)]bDGlcpA(1-2)aLRhap(1-2)aLRhap(1-3)aLRhap(1-2)aLRhap(1-3)[Ac(1-2)]bDGlcpN(1- Status: predicted in silico
Confirmation methods: Sequencing (gene, protein) ID: 3769 Notes: gene cluster name: KL74 | Organism (ID 17027): Acinetobacter baumannii BAL_309 Full structure (ID 15609): CSDB ID(s): 5873, 7859, 10999 Molecule role: CPS | |
| Enzyme name: Gtr145K74 Enzyme GenBank ID: QHE90353.1 Gene name: gtr145 Gene cluster ID: MN148381.1 | Synthesized dimer: bDGlcpA(1-2)aLRhap Donor (ID 35444): ?DGlcpA(1-P-P-5)xXnucU Acceptor (ID 36443): aLRhap(1-2)aLRhap(1-3)aLRhap(1-2)aLRhap(1-3)[Ac(1-2)]bDGlcpN(1-P-P-1)Subst // Subst = undecaprenol Status: predicted in silico
Confirmation methods: Sequencing (gene, protein) ID: 3770 Notes: gene cluster name: KL74; name was augmented to make it unique | Organism (ID 17027): Acinetobacter baumannii BAL_309 Full structure (ID 15609): CSDB ID(s): 5873, 7859, 10999 Molecule role: CPS | |
| Enzyme name: Gtr110KL74 Enzyme GenBank ID: QHE90345.1 Gene name: gtr110 Gene cluster ID: MN148381.1 | Synthesized dimer: aLRhap(1-4)bDGlcpA Donor (ID 35153): ?LRhap(1-P-P-5)xXnucdT Acceptor (ID 36444): bDGlcpA(1-2)aLRhap(1-2)aLRhap(1-3)aLRhap(1-2)aLRhap(1-3)[Ac(1-2)]bDGlcpN(1-P-P-1)Subst // Subst = undecaprenol Status: predicted in silico
Confirmation methods: Sequencing (gene, protein) ID: 3771 Notes: gene cluster name: KL74; name was augmented to make it unique | Organism (ID 17027): Acinetobacter baumannii BAL_309 Full structure (ID 15609): CSDB ID(s): 5873, 7859, 10999 Molecule role: CPS | |
| Enzyme name: Gtr79K74 Enzyme GenBank ID: QHE90346.1 Gene name: gtr79 Gene cluster ID: MN148381.1 | Synthesized dimer: aLRhap(1-3)aLRhap Donor (ID 35153): ?LRhap(1-P-P-5)xXnucdT Acceptor (ID 36445): aLRhap(1-4)bDGlcpA(1-2)aLRhap(1-2)aLRhap(1-3)aLRhap(1-2)aLRhap(1-3)[Ac(1-2)]bDGlcpN(1-P-P-1)Subst // Subst = undecaprenol Status: predicted in silico
Confirmation methods: Sequencing (gene, protein) ID: 3772 Notes: gene cluster name: KL74; name was augmented to make it unique | Organism (ID 17027): Acinetobacter baumannii BAL_309 Full structure (ID 15609): CSDB ID(s): 5873, 7859, 10999 Molecule role: CPS | |
| Enzyme name: WzyK85 Enzyme GenBank ID: AHB32687.1 Gene name: wzy Gene cluster ID: KC526897.2 | Synthesized dimer: bDGlcpN(1-3)bDGlcpA Donor (ID 36445): aLRhap(1-4)bDGlcpA(1-2)aLRhap(1-2)aLRhap(1-3)aLRhap(1-2)aLRhap(1-3)[Ac(1-2)]bDGlcpN(1-P-P-1)Subst // Subst = undecaprenol Acceptor (ID 36447): -3)[aLRhap(1-4)]bDGlcpA(1-2)aLRhap(1-2)aLRhap(1-3)aLRhap(1-2)aLRhap(1-3)[Ac(1-2)]bDGlcpN(1- Status: predicted in silico
Confirmation methods: Sequencing (gene, protein) ID: 3773 Notes: gene cluster name: KL85, PSgc14 | Organism (ID 17028): Acinetobacter baumannii LUH5543 Full structure (ID 15608): CSDB ID(s): 5872, 10879, 10998 Molecule role: CPS | |
| Enzyme name: Gtr82K85 Enzyme GenBank ID: AHB32685.1 Gene name: gtr82 Gene cluster ID: KC526897.2 | Synthesized dimer: aLRhap(1-3)bDGlcpN Donor (ID 35153): ?LRhap(1-P-P-5)xXnucdT Acceptor (ID 36280): Ac(1-2)bDGlcpN(1-P-P-1)Subst // Subst = undecaprenol Status: predicted in silico
Confirmation methods: Sequencing (gene, protein) ID: 3774 Notes: gene cluster name: KL85, PSgc14; name was augmented to make it unique | Organism (ID 17028): Acinetobacter baumannii LUH5543 Full structure (ID 15608): CSDB ID(s): 5872, 10879, 10998 Molecule role: CPS | |
| Enzyme name: Gtr112K85 Enzyme GenBank ID: AHB32686.1 Gene name: gtr112 Gene cluster ID: KC526897.2 | Synthesized dimer: aLRhap(1-2)aLRhap Donor (ID 35153): ?LRhap(1-P-P-5)xXnucdT Acceptor (ID 36440): aLRhap(1-3)[Ac(1-2)]bDGlcpN(1-P-P-1)Subst // Subst = undecaprenol Status: predicted in silico
Confirmation methods: Sequencing (gene, protein) ID: 3775 Notes: gene cluster name: KL85, PSgc14; name was augmented to make it unique | Organism (ID 17028): Acinetobacter baumannii LUH5543 Full structure (ID 15608): CSDB ID(s): 5872, 10879, 10998 Molecule role: CPS | |
| Synthesized dimer: aLRhap(1-3)aLRhap Donor (ID 35153): ?LRhap(1-P-P-5)xXnucdT Acceptor (ID 36441): aLRhap(1-2)aLRhap(1-3)[Ac(1-2)]bDGlcpN(1-P-P-1)Subst // Subst = undecaprenol Status: predicted in silico
Confirmation methods: Sequencing (gene, protein) ID: 3776 Notes: gene cluster name: KL85, PSgc14; name was augmented to make it unique | Organism (ID 17028): Acinetobacter baumannii LUH5543 Full structure (ID 15608): CSDB ID(s): 5872, 10879, 10998 Molecule role: CPS | ||
| Synthesized dimer: aLRhap(1-2)aLRhap Donor (ID 35153): ?LRhap(1-P-P-5)xXnucdT Acceptor (ID 36442): aLRhap(1-3)aLRhap(1-2)aLRhap(1-3)[Ac(1-2)]bDGlcpN(1-P-P-1)Subst // Subst = undecaprenol Status: predicted in silico
Confirmation methods: Sequencing (gene, protein) ID: 3777 Notes: gene cluster name: KL85, PSgc14 | Organism (ID 17028): Acinetobacter baumannii LUH5543 Full structure (ID 15608): CSDB ID(s): 5872, 10879, 10998 Molecule role: CPS | ||
| Enzyme name: Gtr145K85 Enzyme GenBank ID: AHB32688.1 Gene name: gtr145 Gene cluster ID: KC526897.2 | Synthesized dimer: bDGlcpA(1-2)aLRhap Donor (ID 35444): ?DGlcpA(1-P-P-5)xXnucU Acceptor (ID 36443): aLRhap(1-2)aLRhap(1-3)aLRhap(1-2)aLRhap(1-3)[Ac(1-2)]bDGlcpN(1-P-P-1)Subst // Subst = undecaprenol Status: predicted in silico
Confirmation methods: Sequencing (gene, protein) ID: 3778 Notes: gene cluster name: KL85, PSgc14; name was augmented to make it unique | Organism (ID 17028): Acinetobacter baumannii LUH5543 Full structure (ID 15608): CSDB ID(s): 5872, 10879, 10998 Molecule role: CPS | |
| Enzyme name: Gtr78K85 Enzyme GenBank ID: AHB32695.1 Gene name: gtr78 Gene cluster ID: KC526897.2 | Synthesized dimer: aLRhap(1-4)bDGlcpA Donor (ID 35153): ?LRhap(1-P-P-5)xXnucdT Acceptor (ID 36444): bDGlcpA(1-2)aLRhap(1-2)aLRhap(1-3)aLRhap(1-2)aLRhap(1-3)[Ac(1-2)]bDGlcpN(1-P-P-1)Subst // Subst = undecaprenol Status: predicted in silico
Confirmation methods: Sequencing (gene, protein) ID: 3779 Notes: gene cluster name: KL85, PSgc14; name was augmented to make it unique | Organism (ID 17028): Acinetobacter baumannii LUH5543 Full structure (ID 15608): CSDB ID(s): 5872, 10879, 10998 Molecule role: CPS | |
| Enzyme name: ItrA3K87 Enzyme GenBank ID: AHB32838.1 Gene name: itrA3 Gene cluster ID: KC526918 | Synthesized dimer: P(?-?)P Donor (ID 35226): Ac(1-2)?DGlcpN(1-P-P-5)xXnucU Acceptor (ID 35735): P-1)Subst // Subst = undecaprenol Status: predicted in silico
Confirmation methods: Sequencing (gene, protein) ID: 3780 Notes: gene cluster name: KL87, PSgc19; phosphoglycosyltransferase; name was augmented to make it unique | Organism (ID 17029): Acinetobacter baumannii LUH5547 Full structure (ID 36448): Molecule role: CPS | Arbatsky et al. 2021 DOI: 10.1016/j.carres.2021.108439 |
| Enzyme name: WzyK87 Enzyme GenBank ID: AHB32832.1 Gene name: wzy Gene cluster ID: KC526918 | Synthesized dimer: bDGlcpN(1-3)aLRhap Donor (ID 36449): aLRhap(1-2)aDGlcp(1-4)bDGlcpA(1-2)aLRhap(1-2)aLRhap(1-3)aL6dTalp(1-3)[Ac(1-2)]bDGlcpN(1-P-P-1)Subst // Subst = undecaprenol Acceptor (ID 36450): -3)[aLRhap(1-2)aDGlcp(1-4)bDGlcpA(1-2)]aLRhap(1-2)aLRhap(1-3)aL6dTalp(1-3)[Ac(1-2)]bDGlcpN(1- Status: predicted in silico
Confirmation methods: Sequencing (gene, protein) ID: 3781 Notes: gene cluster name: KL87, PSgc19 | Organism (ID 17029): Acinetobacter baumannii LUH5547 Full structure (ID 15604): CSDB ID(s): 10817 Molecule role: CPS | |
| Enzyme name: Gtr29K87 Enzyme GenBank ID: AHB32837.1 Gene name: gtr29 Gene cluster ID: KC526918 | Synthesized dimer: aL6dTalp(1-3)bDGlcpN Donor (ID 36334): ?L6dTalp(1-P-P-5)xXnucdT Acceptor (ID 36280): Ac(1-2)bDGlcpN(1-P-P-1)Subst // Subst = undecaprenol Status: predicted in silico
Confirmation methods: Sequencing (gene, protein) ID: 3782 Notes: gene cluster name: KL87, PSgc19; name was augmented to make it unique | Organism (ID 17029): Acinetobacter baumannii LUH5547 Full structure (ID 15604): CSDB ID(s): 10817 Molecule role: CPS | |
| Enzyme name: Gtr74 Enzyme GenBank ID: AHB32834.1 Gene name: gtr74 Gene cluster ID: KC526918 | Synthesized dimer: aLRhap(1-3)aL6dTalp Donor (ID 35153): ?LRhap(1-P-P-5)xXnucdT Acceptor (ID 36335): aL6dTalp(1-3)[Ac(1-2)]bDGlcpN(1-P-P-1)Subst // Subst = undecaprenol Status: predicted in silico
Confirmation methods: Sequencing (gene, protein) ID: 3783 Notes: gene cluster name: KL87, PSgc19 | Organism (ID 17029): Acinetobacter baumannii LUH5547 Full structure (ID 15604): CSDB ID(s): 10817 Molecule role: CPS | |
| Enzyme name: Gtr159 Enzyme GenBank ID: AHB32833.1 Gene name: gtr159 Gene cluster ID: KC526918 | Synthesized dimer: aLRhap(1-2)aLRhap Donor (ID 35153): ?LRhap(1-P-P-5)xXnucdT Acceptor (ID 36451): aLRhap(1-3)aL6dTalp(1-3)[Ac(1-2)]bDGlcpN(1-P-P-1)Subst // Subst = undecaprenol Status: predicted in silico
Confirmation methods: Sequencing (gene, protein) ID: 3784 Notes: gene cluster name: KL87, PSgc19 | Organism (ID 17029): Acinetobacter baumannii LUH5547 Full structure (ID 15604): CSDB ID(s): 10817 Molecule role: CPS | |
| Enzyme name: Gtr158 Enzyme GenBank ID: AHB32831.1 Gene name: gtr158 Gene cluster ID: KC526918 | Synthesized dimer: bDGlcpA(1-2)aLRhap Donor (ID 35444): ?DGlcpA(1-P-P-5)xXnucU Acceptor (ID 36452): aLRhap(1-2)aLRhap(1-3)aL6dTalp(1-3)[Ac(1-2)]bDGlcpN(1-P-P-1)Subst // Subst = undecaprenol Status: predicted in silico
Confirmation methods: Sequencing (gene, protein) ID: 3785 Notes: gene cluster name: KL87, PSgc19 | Organism (ID 17029): Acinetobacter baumannii LUH5547 Full structure (ID 15604): CSDB ID(s): 10817 Molecule role: CPS | |
| Enzyme name: Gtr129 Enzyme GenBank ID: AHB32823.1 Gene name: gtr129 Gene cluster ID: KC526918 | Synthesized dimer: aDGlcp(1-4)bDGlcpA Donor (ID 34839): ?DGlcp(1-P-P-5)xXnucU Acceptor (ID 36453): bDGlcpA(1-2)aLRhap(1-2)aLRhap(1-3)aL6dTalp(1-3)[Ac(1-2)]bDGlcpN(1-P-P-1)Subst // Subst = undecaprenol Status: predicted in silico
Confirmation methods: Sequencing (gene, protein) ID: 3786 Notes: gene cluster name: KL87, PSgc19 | Organism (ID 17029): Acinetobacter baumannii LUH5547 Full structure (ID 15604): CSDB ID(s): 10817 Molecule role: CPS | |
| Enzyme name: Gtr130 Enzyme GenBank ID: AHB32824.1 Gene name: gtr130 Gene cluster ID: KC526918 | Synthesized dimer: aLRhap(1-2)aDGlcp Donor (ID 35153): ?LRhap(1-P-P-5)xXnucdT Acceptor (ID 36454): aDGlcp(1-4)bDGlcpA(1-2)aLRhap(1-2)aLRhap(1-3)aL6dTalp(1-3)[Ac(1-2)]bDGlcpN(1-P-P-1)Subst // Subst = undecaprenol Status: predicted in silico
Confirmation methods: Sequencing (gene, protein) ID: 3787 Notes: gene cluster name: KL87, PSgc19 | Organism (ID 17029): Acinetobacter baumannii LUH5547 Full structure (ID 15604): CSDB ID(s): 10817 Molecule role: CPS | |
| Enzyme name: abMurG Enzyme GenBank ID: SVJ97884 Gene name: murG | Synthesized dimer: DGlcpN(1-?)Murp Donor (ID 35226): Ac(1-2)?DGlcpN(1-P-P-5)xXnucU Acceptor (ID 36455): xDAla?(1-?)xDAla?(1-?)xXPmN2(1-?)xLGln(1-?)xLAla?(1-?)[Ac(1-2)]?XMurp(1-P-P-1)Subst // Subst = undecaprenol Status: predicted in silico
Confirmation methods: Cristallization ID: 3788 | Organism (ID 219): Acinetobacter baumannii Organ/tissue: Escherichia coli BL21 (DE3) Full structure (ID 36456): Molecule role: CPS | Jung et al. 2021 DOI: 10.1107/S2052252521003729 |
| Enzyme name: WzyK26 Enzyme GenBank ID: QEA72105.1 Gene name: wzy Gene cluster ID: MF522809.1 | Synthesized dimer: bDGlcpN(1-2)aDManp Donor (ID 36457): aDGlcp(1-2)aLRhap(1-3)aDManp(1-2)bDGlcp(1-3)[Ac(1-4)]aL6dTalp(1-3)[Ac(1-2)]bDGlcpN(1-P-P-1)Subst // Subst = undecaprenol Acceptor (ID 36458): -2)[aDGlcp(1-2)aLRhap(1-3)]aDManp(1-2)bDGlcp(1-3)[Ac(1-4)]aL6dTalp(1-3)[Ac(1-2)]bDGlcpN(1- Status: predicted in silico
Confirmation methods: Sequencing (gene, protein) ID: 3789 Notes: gene cluster name: KL26 | Organism (ID 17030,17031): Acinetobacter baumannii KZ-1098, Ab902 Exact full structure is unknown Molecule role: CPS | Kasimova et al. 2021a DOI: 10.1016/j.ijbiomac.2021.09.073 |
| Enzyme name: Gtr29K26 Enzyme GenBank ID: QEA72110.1 Gene name: gtr29 Gene cluster ID: MF522809.1 | Synthesized dimer: aL6dTalp(1-3)bDGlcpN Donor (ID 36334): ?L6dTalp(1-P-P-5)xXnucdT Acceptor (ID 36280): Ac(1-2)bDGlcpN(1-P-P-1)Subst // Subst = undecaprenol Status: predicted in silico
Confirmation methods: Sequencing (gene, protein) ID: 3790 Notes: gene cluster name: KL26; name was augmented to make it unique | Organism (ID 17030,17031): Acinetobacter baumannii KZ-1098, Ab902 Exact full structure is unknown Molecule role: CPS | |
| Enzyme name: Atr6 Enzyme GenBank ID: QEA72108.1 Gene name: atr6 Gene cluster ID: MF522809.1 | Synthesized dimer: Ac(1-4)aL6dTalp Acceptor (ID 36335): aL6dTalp(1-3)[Ac(1-2)]bDGlcpN(1-P-P-1)Subst // Subst = undecaprenol Status: predicted in silico
Confirmation methods: Sequencing (gene, protein) ID: 3791 Notes: gene cluster name: KL26 | Organism (ID 17030,17031): Acinetobacter baumannii KZ-1098, Ab902 Exact full structure is unknown Molecule role: CPS | |
| Enzyme name: Gtr28K26 Enzyme GenBank ID: QEA72107.1 Gene name: gtr28 Gene cluster ID: MF522809.1 | Synthesized dimer: bDGlcp(1-3)aL6dTalp Donor (ID 34839): ?DGlcp(1-P-P-5)xXnucU Acceptor (ID 36459): Ac(1-4)aL6dTalp(1-3)[Ac(1-2)]bDGlcpN(1-P-P-1)Subst // Subst = undecaprenol Status: predicted in silico
Confirmation methods: Sequencing (gene, protein) ID: 3792 Notes: gene cluster name: KL26; name was augmented to make it unique | Organism (ID 17030,17031): Acinetobacter baumannii KZ-1098, Ab902 Exact full structure is unknown Molecule role: CPS | |
| Enzyme name: Gtr55 Enzyme GenBank ID: QEA72106.1 Gene name: gtr55 Gene cluster ID: MF522809.1 | Synthesized dimer: aDManp(1-2)bDGlcp Donor (ID 34900): ?DManp(1-P-P-5)xXnucU Acceptor (ID 36460): bDGlcp(1-3)[Ac(1-4)]aL6dTalp(1-3)[Ac(1-2)]bDGlcpN(1-P-P-1)Subst // Subst = undecaprenol Status: predicted in silico
Confirmation methods: Sequencing (gene, protein) ID: 3793 Notes: gene cluster name: KL26 | Organism (ID 17030,17031): Acinetobacter baumannii KZ-1098, Ab902 Exact full structure is unknown Molecule role: CPS | |
| Enzyme name: Gtr54 Enzyme GenBank ID: QEA72103.1 Gene name: gtr54 Gene cluster ID: MF522809.1 | Synthesized dimer: aLRhap(1-3)aDManp Donor (ID 35153): ?LRhap(1-P-P-5)xXnucdT Acceptor (ID 36461): aDManp(1-2)bDGlcp(1-3)[Ac(1-4)]aL6dTalp(1-3)[Ac(1-2)]bDGlcpN(1-P-P-1)Subst // Subst = undecaprenol Status: predicted in silico
Confirmation methods: Sequencing (gene, protein) ID: 3794 Notes: gene cluster name: KL26 | Organism (ID 17030,17031): Acinetobacter baumannii KZ-1098, Ab902 Exact full structure is unknown Molecule role: CPS | |
| Enzyme name: Gtr53 Enzyme GenBank ID: QEA72102.1 Gene name: gtr53 Gene cluster ID: MF522809.1 | Synthesized dimer: aDGlcp(1-2)aLRhap Donor (ID 34839): ?DGlcp(1-P-P-5)xXnucU Acceptor (ID 36462): aLRhap(1-3)aDManp(1-2)bDGlcp(1-3)[Ac(1-4)]aL6dTalp(1-3)[Ac(1-2)]bDGlcpN(1-P-P-1)Subst // Subst = undecaprenol Status: predicted in silico
Confirmation methods: Sequencing (gene, protein) ID: 3795 Notes: gene cluster name: KL26 | Organism (ID 17030,17031): Acinetobacter baumannii KZ-1098, Ab902 Exact full structure is unknown Molecule role: CPS | |
| Enzyme name: ItrA2K139 Enzyme GenBank ID: UBS89865.1 Gene name: itrA2 Gene cluster ID: MZ773511.1 | Synthesized dimer: P(?-?)P Donor (ID 35669): Ac(1-2)?DGalpN(1-P-P-5)xXnucU Acceptor (ID 35735): P-1)Subst // Subst = undecaprenol Status: predicted in silico
Confirmation methods: Sequencing (gene, protein) ID: 3796 Notes: gene cluster name: KL139, phosphoglycosyltransferas; there is a discrepancy in the naming of the protein in the article and NIH protein database; name was augmented to make it unique | Organism (ID 17032): Acinetobacter baumannii MAR-17-1041 Full structure (ID 36463): Molecule role: CPS | Kasimova et al. 2021b DOI: 10.1016/j.ijbiomac.2021.11.062 |
| Enzyme name: WzyK139 Enzyme GenBank ID: UBS89861 Gene name: wzy Gene cluster ID: MZ773511.1 | Synthesized dimer: aDGalpN(1-4)bDGalpN Donor (ID 36464): bDGlcp(1-6)[Ac(1-2)]bDGalpN(1-3)aDGalp(1-6)bDGlcp(1-3)[Ac(1-2)]aDGalpN(1-P-P-1)Subst // Subst = undecaprenol Acceptor (ID 36465): -4)[bDGlcp(1-6),Ac(1-2)]bDGalpN(1-3)aDGalp(1-6)bDGlcp(1-3)[Ac(1-2)]aDGalpN(1- Status: predicted in silico
Confirmation methods: Sequencing (gene, protein) ID: 3797 Notes: gene cluster name: KL139 | Organism (ID 17032): Acinetobacter baumannii MAR-17-1041 Full structure (ID 15726): CSDB ID(s): 5847 Molecule role: CPS | |
| Enzyme name: Gtr9K139 Enzyme GenBank ID: AQQ74324.1 Gene name: gtr9 Gene cluster ID: MZ773511.1 | Synthesized dimer: bDGlcp(1-3)aDGalpN Donor (ID 34839): ?DGlcp(1-P-P-5)xXnucU Acceptor (ID 36250): Ac(1-2)aDGalpN(1-P-P-1)Subst // Subst = undecaprenol Status: predicted in silico
Confirmation methods: Sequencing (gene, protein) ID: 3798 Notes: gene cluster name: KL139; name was augmented to make it unique | Organism (ID 17032): Acinetobacter baumannii MAR-17-1041 Full structure (ID 15726): CSDB ID(s): 5847 Molecule role: CPS | |
| Enzyme name: Gtr77K139 Enzyme GenBank ID: AQQ74323.1 Gene name: gtr77 Gene cluster ID: MZ773511.1 | Synthesized dimer: aDGalp(1-6)bDGlcp Donor (ID 35273): ?DGalp(1-P-P-5)xXnucU Acceptor (ID 36466): bDGlcp(1-3)[Ac(1-2)]aDGalpN(1-P-P-1)Subst // Subst = undecaprenol Status: predicted in silico
Confirmation methods: Sequencing (gene, protein) ID: 3799 Notes: gene cluster name: KL139; name was augmented to make it unique | Organism (ID 17032): Acinetobacter baumannii MAR-17-1041 Full structure (ID 15726): CSDB ID(s): 5847 Molecule role: CPS | |
| Enzyme name: Gtr144 Enzyme GenBank ID: UBS89862 Gene name: gtr144 Gene cluster ID: MZ773511.1 | Synthesized dimer: bDGalpN(1-3)aDGalp Donor (ID 35669): Ac(1-2)?DGalpN(1-P-P-5)xXnucU Acceptor (ID 36467): aDGalp(1-6)bDGlcp(1-3)[Ac(1-2)]aDGalpN(1-P-P-1)Subst // Subst = undecaprenol Status: predicted in silico
Confirmation methods: Sequencing (gene, protein) ID: 3800 Notes: gene cluster name: KL139 | Organism (ID 17032): Acinetobacter baumannii MAR-17-1041 Full structure (ID 15726): CSDB ID(s): 5847 Molecule role: CPS | |
| Enzyme name: Gtr32K139 Enzyme GenBank ID: UBS89860 Gene name: gtr32 Gene cluster ID: MZ773511.1 | Synthesized dimer: bDGlcp(1-6)bDGalpN Donor (ID 34839): ?DGlcp(1-P-P-5)xXnucU Acceptor (ID 36468): Ac(1-2)bDGalpN(1-3)aDGalp(1-6)bDGlcp(1-3)[Ac(1-2)]aDGalpN(1-P-P-1)Subst // Subst = undecaprenol Status: predicted in silico
Confirmation methods: Sequencing (gene, protein) ID: 3801 Notes: gene cluster name: KL139; name was augmented to make it unique | Organism (ID 17032): Acinetobacter baumannii MAR-17-1041 Full structure (ID 15726): CSDB ID(s): 5847 Molecule role: CPS | |
| Enzyme name: WzyK106 Enzyme GenBank ID: QBM04789.1 Gene name: wzy Gene cluster ID: MK399430.1 | Synthesized dimer: bDGlcpN(1-4)aDGlcpN Donor (ID 36337): Ac(1-2)aDGlcpN(1-2)bDGlcp(1-3)aL6dTalp(1-3)[Ac(1-2)]bDGlcpN(1-P-P-1)Subst // Subst = undecaprenol Acceptor (ID 36469): -4)[Ac(1-2)]aDGlcpN(1-2)bDGlcp(1-3)aL6dTalp(1-3)[Ac(1-2)]bDGlcpN(1- Status: predicted in silico
Confirmation methods: Sequencing (gene, protein) ID: 3802 Notes: gene cluster name: KL106 | Organism (ID 17033): Acinetobacter baumannii 48-1789 Full structure (ID 15721): CSDB ID(s): 5840, 5857 Molecule role: CPS | Kasimova et al. 2021c DOI: 10.3390/ijms22115641 |
| Enzyme name: Gtr29K106 Enzyme GenBank ID: QBM04794.1 Gene name: gtr29 Gene cluster ID: MK399430.1 | Synthesized dimer: aL6dTalp(1-3)bDGlcpN Donor (ID 36334): ?L6dTalp(1-P-P-5)xXnucdT Acceptor (ID 36280): Ac(1-2)bDGlcpN(1-P-P-1)Subst // Subst = undecaprenol Status: predicted in silico
Confirmation methods: Sequencing (gene, protein) ID: 3803 Notes: gene cluster name: KL106; name was augmented to make it unique | Organism (ID 17033): Acinetobacter baumannii 48-1789 Full structure (ID 15721): CSDB ID(s): 5840, 5857 Molecule role: CPS | |
| Enzyme name: Gtr60K106 Enzyme GenBank ID: QBM04791.1 Gene name: gtr60 Gene cluster ID: MK399430.1 | Synthesized dimer: bDGlcp(1-3)aL6dTalp Donor (ID 34839): ?DGlcp(1-P-P-5)xXnucU Acceptor (ID 36335): aL6dTalp(1-3)[Ac(1-2)]bDGlcpN(1-P-P-1)Subst // Subst = undecaprenol Status: predicted in silico
Confirmation methods: Sequencing (gene, protein) ID: 3804 Notes: gene cluster name: KL106; name was augmented to make it unique | Organism (ID 17033): Acinetobacter baumannii 48-1789 Full structure (ID 15721): CSDB ID(s): 5840, 5857 Molecule role: CPS | |
| Enzyme name: Gtr27K106 Enzyme GenBank ID: QBM04790.1 Gene name: gtr27 Gene cluster ID: MK399430.1 | Synthesized dimer: aDGlcpN(1-2)bDGlcp Donor (ID 35226): Ac(1-2)?DGlcpN(1-P-P-5)xXnucU Acceptor (ID 36336): bDGlcp(1-3)aL6dTalp(1-3)[Ac(1-2)]bDGlcpN(1-P-P-1)Subst // Subst = undecaprenol Status: predicted in silico
Confirmation methods: Sequencing (gene, protein) ID: 3805 Notes: gene cluster name: KL106; name was augmented to make it unique | Organism (ID 17033): Acinetobacter baumannii 48-1789 Full structure (ID 15721): CSDB ID(s): 5840, 5857 Molecule role: CPS | |
| Enzyme name: WzyK112 Enzyme GenBank ID: QNR01097.1 Gene name: wzy Gene cluster ID: MT152376.1 | Synthesized dimer: bDGlcpN(1-3)aDGlcpN Donor (ID 36470): bLRhap(1-4)[Ac(1-2)]aDGlcpN(1-2)bDGlcp(1-3)aL6dTalp(1-3)[Ac(1-2)]bDGlcpN(1-P-P-1)Subst // Subst = undecaprenol Acceptor (ID 36471): -3)[bLRhap(1-4),Ac(1-2)]aDGlcpN(1-2)bDGlcp(1-3)aL6dTalp(1-3)[Ac(1-2)]bDGlcpN(1- Status: predicted in silico
Confirmation methods: Sequencing (gene, protein) ID: 3806 Notes: gene cluster name: KL112 | Organism (ID 17034): Acinetobacter baumannii MAR24 Exact full structure is unknown Molecule role: CPS | |
| Enzyme name: Gtr29K112 Enzyme GenBank ID: QNR01102.1 Gene name: gtr29 Gene cluster ID: MT152376.1 | Synthesized dimer: aL6dTalp(1-3)bDGlcpN Donor (ID 36334): ?L6dTalp(1-P-P-5)xXnucdT Acceptor (ID 36280): Ac(1-2)bDGlcpN(1-P-P-1)Subst // Subst = undecaprenol Status: predicted in silico
Confirmation methods: Sequencing (gene, protein) ID: 3807 Notes: gene cluster name: KL112; name was augmented to make it unique | Organism (ID 17034): Acinetobacter baumannii MAR24 Exact full structure is unknown Molecule role: CPS | |
| Enzyme name: Gtr60K112 Enzyme GenBank ID: QNR01099.1 Gene name: gtr60 Gene cluster ID: MT152376.1 | Synthesized dimer: bDGlcp(1-3)aL6dTalp Donor (ID 34839): ?DGlcp(1-P-P-5)xXnucU Acceptor (ID 36335): aL6dTalp(1-3)[Ac(1-2)]bDGlcpN(1-P-P-1)Subst // Subst = undecaprenol Status: predicted in silico
Confirmation methods: Sequencing (gene, protein) ID: 3808 Notes: gene cluster name: KL112; name was augmented to make it unique | Organism (ID 17034): Acinetobacter baumannii MAR24 Exact full structure is unknown Molecule role: CPS | |
| Enzyme name: Gtr27K112 Enzyme GenBank ID: QNR01098.1 Gene name: gtr27 Gene cluster ID: MT152376.1 | Synthesized dimer: aDGlcpN(1-2)bDGlcp Donor (ID 35226): Ac(1-2)?DGlcpN(1-P-P-5)xXnucU Acceptor (ID 36336): bDGlcp(1-3)aL6dTalp(1-3)[Ac(1-2)]bDGlcpN(1-P-P-1)Subst // Subst = undecaprenol Status: predicted in silico
Confirmation methods: Sequencing (gene, protein) ID: 3809 Notes: gene cluster name: KL112; name was augmented to make it unique | Organism (ID 17034): Acinetobacter baumannii MAR24 Exact full structure is unknown Molecule role: CPS | |
| Enzyme name: Gtr183 Enzyme GenBank ID: QNR01095.1 Gene name: gtr183 Gene cluster ID: MT152376.1 | Synthesized dimer: bLRhap(1-4)aDGlcpN Donor (ID 35153): ?LRhap(1-P-P-5)xXnucdT Acceptor (ID 36337): Ac(1-2)aDGlcpN(1-2)bDGlcp(1-3)aL6dTalp(1-3)[Ac(1-2)]bDGlcpN(1-P-P-1)Subst // Subst = undecaprenol Status: predicted in silico
Confirmation methods: Sequencing (gene, protein) ID: 3810 Notes: gene cluster name: KL112 | Organism (ID 17034): Acinetobacter baumannii MAR24 Exact full structure is unknown Molecule role: CPS | |
| Enzyme name: WzyK144 Enzyme GenBank ID: QWY12748.1 Gene name: wzy Gene cluster ID: MZ064058 | Synthesized dimer: bDGlcpN(1-3)aLRhap Donor (ID 35226): Ac(1-2)?DGlcpN(1-P-P-5)xXnucU Acceptor (ID 36472): aLRhap(1-4)bDGlcpA(1-3)aLRhap(1-2)aLRhap(1-3)aLRhap(1-3)[Ac(1-2)]aDGlcpN(1-P-P-1)Subst // Subst = undecaprenol Status: predicted in silico
Confirmation methods: Sequencing (gene, protein) ID: 3811 Notes: gene cluster name: KL144 | Organism (ID 17035): Acinetobacter baumannii Ab-46-1632 (MA-46-1632) Full structure (ID 15744): CSDB ID(s): 10880 Molecule role: CPS | Kenyon et al. 2021 DOI: 10.1016/j.ijbiomac.2021.10.178 |
| Enzyme name: ItrA3K144 Enzyme GenBank ID: QWY12751.1 Gene name: itrA3 Gene cluster ID: MZ064058 | Synthesized dimer: P(?-?)P Donor (ID 35226): Ac(1-2)?DGlcpN(1-P-P-5)xXnucU Acceptor (ID 35735): P-1)Subst // Subst = undecaprenol Status: predicted in silico
Confirmation methods: Sequencing (gene, protein) ID: 3812 Notes: gene cluster name: KL144, phosphoglycosyltransferase; name was augmented to make it unique | Organism (ID 17036): Acinetobacter baumannii Ab-46-1632 Full structure (ID 36473): Molecule role: CPS | |
| Enzyme name: Gtr82K144 Enzyme GenBank ID: QWY12750.1 Gene name: gtr82 Gene cluster ID: MZ064058 | Synthesized dimer: aLRhap(1-3)bDGlcpN Donor (ID 35153): ?LRhap(1-P-P-5)xXnucdT Acceptor (ID 36280): Ac(1-2)bDGlcpN(1-P-P-1)Subst // Subst = undecaprenol Status: predicted in silico
Confirmation methods: Sequencing (gene, protein) ID: 3813 Notes: gene cluster name: KL144; name was augmented to make it unique | Organism (ID 17036): Acinetobacter baumannii Ab-46-1632 Full structure (ID 15744): CSDB ID(s): 10880 Molecule role: CPS | |
| Enzyme name: Gtr81 Enzyme GenBank ID: QWY12749.1 Gene name: gtr81 Gene cluster ID: MZ064058 | Synthesized dimer: aLRhap(1-3)aLRhap Donor (ID 35153): ?LRhap(1-P-P-5)xXnucdT Acceptor (ID 36440): aLRhap(1-3)[Ac(1-2)]bDGlcpN(1-P-P-1)Subst // Subst = undecaprenol Status: predicted in silico
Confirmation methods: Sequencing (gene, protein) ID: 3814 Notes: multifunctional, gene cluster name: KL144 | Organism (ID 17036): Acinetobacter baumannii Ab-46-1632 Full structure (ID 15744): CSDB ID(s): 10880 Molecule role: CPS | |
| Synthesized dimer: aLRhap(1-2)aLRhap Donor (ID 35153): ?LRhap(1-P-P-5)xXnucdT Acceptor (ID 36474): aLRhap(1-3)aLRhap(1-3)[Ac(1-2)]bDGlcpN(1-P-P-1)Subst // Subst = undecaprenol Status: predicted in silico
Confirmation methods: Sequencing (gene, protein) ID: 3815 Notes: multifunctional, gene cluster name: KL144 | Organism (ID 17036): Acinetobacter baumannii Ab-46-1632 Full structure (ID 15744): CSDB ID(s): 10880 Molecule role: CPS | ||
| Enzyme name: Gtr221 Enzyme GenBank ID: QWY12747.1 Gene name: gtr221 Gene cluster ID: MZ064058 | Synthesized dimer: bDGlcpA(1-3)aLRhap Donor (ID 35444): ?DGlcpA(1-P-P-5)xXnucU Acceptor (ID 36475): aLRhap(1-2)aLRhap(1-3)aLRhap(1-3)[Ac(1-2)]bDGlcpN(1-P-P-1)Subst // Subst = undecaprenol Status: predicted in silico
Confirmation methods: Sequencing (gene, protein) ID: 3816 Notes: gene cluster name: KL144 | Organism (ID 17036): Acinetobacter baumannii Ab-46-1632 Full structure (ID 15744): CSDB ID(s): 10880 Molecule role: CPS | |
| Enzyme name: Gtr78K144 Enzyme GenBank ID: QWY12740.1 Gene name: gtr78 Gene cluster ID: MZ064058 | Synthesized dimer: aLRhap(1-4)bDGlcpA Donor (ID 35153): ?LRhap(1-P-P-5)xXnucdT Acceptor (ID 36476): bDGlcpA(1-3)aLRhap(1-2)aLRhap(1-3)aLRhap(1-3)[Ac(1-2)]bDGlcpN(1-P-P-1)Subst // Subst = undecaprenol Status: predicted in silico
Confirmation methods: Sequencing (gene, protein) ID: 3817 Notes: gene cluster name: KL144; name was augmented to make it unique | Organism (ID 17036): Acinetobacter baumannii Ab-46-1632 Full structure (ID 15744): CSDB ID(s): 10880 Molecule role: CPS | |
| Enzyme name: Gtr82K86 Enzyme GenBank ID: QBM04851.1 Gene name: gtr82 Gene cluster ID: MK399432 | Synthesized dimer: aLRhap(1-3)bDGlcpN Donor (ID 35153): ?LRhap(1-P-P-5)xXnucdT Acceptor (ID 35643): Ac(1-2)aDGlcpN(1-P-P-1)Subst // Subst = undecaprenol Status: predicted in silico
Confirmation methods: Sequencing (gene, protein) ID: 3818 Notes: gene cluster name: KL86; name was augmented to make it unique | Organism (ID 9136): Acinetobacter baumannii MAR 55-66 Full structure (ID 15594): CSDB ID(s): 5871, 10816 Molecule role: CPS | |
| Enzyme name: Gtr80 Enzyme GenBank ID: QBM04848.1 Gene name: gtr80 Gene cluster ID: MK399432 | Synthesized dimer: bDGlcpA(1-2)aLRhap Donor (ID 35444): ?DGlcpA(1-P-P-5)xXnucU Acceptor (ID 36475): aLRhap(1-2)aLRhap(1-3)aLRhap(1-3)[Ac(1-2)]bDGlcpN(1-P-P-1)Subst // Subst = undecaprenol Status: predicted in silico
Confirmation methods: Sequencing (gene, protein) ID: 3819 Notes: gene cluster name: KL86 | Organism (ID 9136): Acinetobacter baumannii MAR 55-66 Full structure (ID 15594): CSDB ID(s): 5871, 10816 Molecule role: CPS | |
| Enzyme name: Gtr110KL86 Enzyme GenBank ID: QBM04840.1 Gene name: gtr110 Gene cluster ID: MK399432 | Synthesized dimer: aLRhap(1-4)bDGlcpA Donor (ID 35153): ?LRhap(1-P-P-5)xXnucdT Acceptor (ID 36477): bDGlcpA(1-2)aLRhap(1-2)aLRhap(1-3)aLRhap(1-3)[Ac(1-2)]bDGlcpN(1-P-P-1)Subst // Subst = undecaprenol Status: predicted in silico
Confirmation methods: Sequencing (gene, protein) ID: 3820 Notes: gene cluster name: KL86; name was augmented to make it unique | Organism (ID 9136): Acinetobacter baumannii MAR 55-66 Full structure (ID 15594): CSDB ID(s): 5871, 10816 Molecule role: CPS | |
| Enzyme name: Gtr79K86 Enzyme GenBank ID: QBM04841.1 Gene name: gtr79 Gene cluster ID: MK399432 | Synthesized dimer: aLRhap(1-3)aLRhap Donor (ID 35153): ?LRhap(1-P-P-5)xXnucdT Acceptor (ID 36478): aLRhap(1-4)bDGlcpA(1-2)aLRhap(1-2)aLRhap(1-3)aLRhap(1-3)[Ac(1-2)]bDGlcpN(1-P-P-1)Subst // Subst = undecaprenol Status: predicted in silico
Confirmation methods: Sequencing (gene, protein) ID: 3821 Notes: gene cluster name: KL86; name was augmented to make it unique | Organism (ID 9136): Acinetobacter baumannii MAR 55-66 Full structure (ID 15594): CSDB ID(s): 5871, 10816 Molecule role: CPS | |
| Enzyme name: ItrA4 Enzyme GenBank ID: KMV25998.1 Gene name: itrA4 Gene cluster ID: MN958100.1 | Synthesized dimer: P(?-?)P Donor (ID 35273): ?DGalp(1-P-P-5)xXnucU Acceptor (ID 35735): P-1)Subst // Subst = undecaprenol Status: predicted in silico
Confirmation methods: Sequencing (gene, protein) ID: 3822 Notes: gene cluster name: KL92, phosphoglycosyltransferase | Organism (ID 17037): Acinetobacter baumannii B8300 Full structure (ID 36479): Molecule role: CPS | Senchenkova et al. 2021 DOI: 10.1016/j.resmic.2021.103815 |
| Enzyme name: WzyK92 Enzyme GenBank ID: KMV26001.1 Gene name: wzy Gene cluster ID: MN958100.1 | Synthesized dimer: bDGalp(1-4)aLRhap Donor (ID 36480): aLRhap(1-3)aLRhap(1-3)aLRhap(1-3)aLRhap(1-3)bDGalp(1-P-P-1)Subst // Subst = undecaprenol Acceptor (ID 36481): -4)[aLRhap(1-3)]aLRhap(1-3)aLRhap(1-3)aLRhap(1-3)bDGalp(1- Status: predicted in silico
Confirmation methods: Sequencing (gene, protein) ID: 3823 Notes: gene cluster name: KL92 | Organism (ID 17037): Acinetobacter baumannii B8300 Full structure (ID 15847): CSDB ID(s): 10936, 20931 Molecule role: CPS | |
| Enzyme name: Gtr166 Enzyme GenBank ID: KMV25999.1 Gene name: gtr166 Gene cluster ID: MN958100.1 | Synthesized dimer: aLRhap(1-3)bDGalp Donor (ID 35153): ?LRhap(1-P-P-5)xXnucdT Acceptor (ID 35800): bDGalp(1-P-P-1)Subst // Subst = undecaprenol Status: predicted in silico
Confirmation methods: Sequencing (gene, protein) ID: 3824 Notes: gene cluster name: KL92 | Organism (ID 17037): Acinetobacter baumannii B8300 Full structure (ID 15847): CSDB ID(s): 10936, 20931 Molecule role: CPS | |
| Enzyme name: Gtr165 Enzyme GenBank ID: KMV26002.1 Gene name: gtr165 Gene cluster ID: MN958100.1 | Synthesized dimer: aLRhap(1-3)aLRhap Donor (ID 35153): ?LRhap(1-P-P-5)xXnucdT Acceptor (ID 36482): aLRhap(1-3)bDGalp(1-P-P-1)Subst // Subst = undecaprenol Status: predicted in silico
Confirmation methods: Sequencing (gene, protein) ID: 3825 Notes: multifunctional, gene cluster name: KL92 | Organism (ID 17037): Acinetobacter baumannii B8300 Full structure (ID 15847): CSDB ID(s): 10936, 20931 Molecule role: CPS | |
| Synthesized dimer: aLRhap(1-3)aLRhap Donor (ID 35153): ?LRhap(1-P-P-5)xXnucdT Acceptor (ID 36483): aLRhap(1-3)aLRhap(1-3)bDGalp(1-P-P-1)Subst // Subst = undecaprenol Status: predicted in silico
Confirmation methods: Sequencing (gene, protein) ID: 3826 Notes: multifunctional, gene cluster name: KL92 | Organism (ID 17037): Acinetobacter baumannii B8300 Full structure (ID 15847): CSDB ID(s): 10936, 20931 Molecule role: CPS | ||
| Enzyme name: Gtr164 Enzyme GenBank ID: KMV26004.1 Gene name: gtr164 Gene cluster ID: MN958100.1 | Synthesized dimer: aLRhap(1-3)aLRhap Donor (ID 35153): ?LRhap(1-P-P-5)xXnucdT Acceptor (ID 36484): aLRhap(1-3)aLRhap(1-3)aLRhap(1-3)bDGalp(1-P-P-1)Subst // Subst = undecaprenol Status: predicted in silico
Confirmation methods: Sequencing (gene, protein) ID: 3827 Notes: gene cluster name: KL92 | Organism (ID 17037): Acinetobacter baumannii B8300 Full structure (ID 15847): CSDB ID(s): 10936, 20931 Molecule role: CPS | |
| Enzyme name: WzyK89 Enzyme GenBank ID: AHB32861.1 Gene name: wzy Gene cluster ID: KC526919.1 | Synthesized dimer: bDGlcpN(1-3)aDGalpN Donor (ID 36485): bDGlcp(1-2)[Ac(1-3)]bDFucp3N(1-6)aDGlcp(1-4)[Ac(1-2)]aDGalpN(1-3)[Ac(1-2)]bDGlcpN(1-P-P-1)Subst // Subst = undecaprenol Acceptor (ID 36486): -3)[bDGlcp(1-2)[Ac(1-3)]bDFucp3N(1-6)aDGlcp(1-4),Ac(1-2)]aDGalpN(1-3)[Ac(1-2)]bDGlcpN(1- Status: predicted in silico
Confirmation methods: Sequencing (gene, protein) ID: 3828 Notes: gene cluster name: KL89 | Organism (ID 17038): Acinetobacter baumannii LUH5552 Full structure (ID 15832): CSDB ID(s): 8429, 9738 Molecule role: CPS | Arbatsky et al. 2022a DOI: 10.1016/j.ijbiomac.2022.07.085 |
| Enzyme name: Gtr50K89 Enzyme GenBank ID: AHB32863.1 Gene name: gtr50 Gene cluster ID: KC526919.1 | Synthesized dimer: aDGalpN(1-3)bDGlcpN Donor (ID 35669): Ac(1-2)?DGalpN(1-P-P-5)xXnucU Acceptor (ID 36280): Ac(1-2)bDGlcpN(1-P-P-1)Subst // Subst = undecaprenol Status: predicted in silico
Confirmation methods: Sequencing (gene, protein) ID: 3829 Notes: gene cluster name: KL89; name was augmented to make it unique | Organism (ID 17038): Acinetobacter baumannii LUH5552 Full structure (ID 15832): CSDB ID(s): 8429, 9738 Molecule role: CPS | |
| Enzyme name: Gtr162 Enzyme GenBank ID: AHB32862.2 Gene name: gtr162 Gene cluster ID: KC526919.1 | Synthesized dimer: aDGlcp(1-4)aDGalpN Donor (ID 34839): ?DGlcp(1-P-P-5)xXnucU Acceptor (ID 36312): Ac(1-2)aDGalpN(1-3)[Ac(1-2)]bDGlcpN(1-P-P-1)Subst // Subst = undecaprenol Status: predicted in silico
Confirmation methods: Sequencing (gene, protein) ID: 3830 Notes: gene cluster name: KL89 | Organism (ID 17038): Acinetobacter baumannii LUH5552 Full structure (ID 15832): CSDB ID(s): 8429, 9738 Molecule role: CPS | |
| Enzyme name: Gtr122 Enzyme GenBank ID: AHB32860.1 Gene name: gtr122 Gene cluster ID: KC526919.1 | Synthesized dimer: bDFucp3N(1-6)aDGlcp Donor (ID 36346): Ac(1-3)?DFucp3N(1-P-P-5)xXnucdT Acceptor (ID 36487): aDGlcp(1-4)[Ac(1-2)]aDGalpN(1-3)[Ac(1-2)]bDGlcpN(1-P-P-1)Subst // Subst = undecaprenol Status: predicted in silico
Confirmation methods: Sequencing (gene, protein) ID: 3831 Notes: gene cluster name: KL89 | Organism (ID 17038): Acinetobacter baumannii LUH5552 Full structure (ID 15832): CSDB ID(s): 8429, 9738 Molecule role: CPS | |
| Enzyme name: Gtr121 Enzyme GenBank ID: AHB32859.1 Gene name: gtr121 Gene cluster ID: KC526919.1 | Synthesized dimer: bDGlcp(1-2)bDFucp3N Donor (ID 34839): ?DGlcp(1-P-P-5)xXnucU Acceptor (ID 36488): Ac(1-3)bDFucp3N(1-6)aDGlcp(1-4)[Ac(1-2)]aDGalpN(1-3)[Ac(1-2)]bDGlcpN(1-P-P-1)Subst // Subst = undecaprenol Status: predicted in silico
Confirmation methods: Sequencing (gene, protein) ID: 3832 Notes: gene cluster name: KL89 | Organism (ID 17038): Acinetobacter baumannii LUH5552 Full structure (ID 15832): CSDB ID(s): 8429, 9738 Molecule role: CPS | |
| Enzyme name: WzyK127 Enzyme GenBank ID: QBM04715.1 Gene name: wzy Gene cluster ID: MK399427.1 | Synthesized dimer: bDGalpN(1-4)aDGalp Donor (ID 36489): bDGlcp(1-6)[Ac(1-2)]bDGalpN(1-6)aDGalp(1-6)bDGlcp(1-3)[Ac(1-2)]bDGalpN(1-P-P-1)Subst // Subst = undecaprenol Acceptor (ID 36490): -4)[bDGlcp(1-6)[Ac(1-2)]bDGalpN(1-6)]aDGalp(1-6)bDGlcp(1-3)[Ac(1-2)]bDGalpN(1- Status: predicted in silico
Confirmation methods: Sequencing (gene, protein) ID: 3833 Notes: gene cluster name: KL127 | Organism (ID 17039,17040): Acinetobacter baumannii ST498, KZ-1257 Full structure (ID 15989): CSDB ID(s): 20816 Molecule role: CPS | Arbatsky et al. 2022b DOI: 10.1128/spectrum.01503-21 |
| Enzyme name: WzyPh1 Enzyme GenBank ID: MBV6766733.1 Gene name: wzyPh1 Gene cluster ID: MK399427.1 | Synthesized dimer: bDGalpN(1-3)aDGalp Donor (ID 36489): bDGlcp(1-6)[Ac(1-2)]bDGalpN(1-6)aDGalp(1-6)bDGlcp(1-3)[Ac(1-2)]bDGalpN(1-P-P-1)Subst // Subst = undecaprenol Acceptor (ID 36491): -3)[bDGlcp(1-6)[Ac(1-2)]bDGalpN(1-6)]aDGalp(1-6)bDGlcp(1-3)[Ac(1-2)]bDGalpN(1- Status: predicted in silico
Confirmation methods: Sequencing (gene, protein) ID: 3834 Notes: gene cluster name: KL127 | Organism (ID 17041,17042): Acinetobacter baumannii 34-1454, ST448 Full structure (ID 15987): CSDB ID(s): 8430 Molecule role: CPS | |
| Enzyme name: Gtr9K127 Enzyme GenBank ID: QBM04717.1 Gene name: gtr9 Gene cluster ID: MK399427.1 | Synthesized dimer: bDGlcp(1-3)bDGalpN Donor (ID 34839): ?DGlcp(1-P-P-5)xXnucU Acceptor (ID 36235): Ac(1-2)bDGalpN(1-P-P-1)Subst // Subst = undecaprenol Status: predicted in silico
Confirmation methods: Sequencing (gene, protein) ID: 3835 Notes: gene cluster name: KL127; name was augmented to make it unique | Organism (ID 17041,17042): Acinetobacter baumannii 34-1454, ST448 Full structure (ID 15987): CSDB ID(s): 8430 Molecule role: CPS | |
| Enzyme name: Gtr201 Enzyme GenBank ID: QBM04716.1 Gene name: gtr201 Gene cluster ID: MK399427.1 | Synthesized dimer: aDGalp(1-6)bDGlcp Donor (ID 35273): ?DGalp(1-P-P-5)xXnucU Acceptor (ID 36245): bDGlcp(1-3)[Ac(1-2)]bDGalpN(1-P-P-1)Subst // Subst = undecaprenol Status: predicted in silico
Confirmation methods: Sequencing (gene, protein) ID: 3836 Notes: gene cluster name: KL127 | Organism (ID 17041,17042): Acinetobacter baumannii 34-1454, ST448 Full structure (ID 15987): CSDB ID(s): 8430 Molecule role: CPS | |
| Enzyme name: Gtr200K127 Enzyme GenBank ID: QBM04714.1 Gene name: gtr200 Gene cluster ID: MK399427.1 | Synthesized dimer: bDGalpN(1-6)aDGalp Donor (ID 35669): Ac(1-2)?DGalpN(1-P-P-5)xXnucU Acceptor (ID 36246): aDGalp(1-6)bDGlcp(1-3)[Ac(1-2)]bDGalpN(1-P-P-1)Subst // Subst = undecaprenol Status: predicted in silico
Confirmation methods: Sequencing (gene, protein) ID: 3837 Notes: gene cluster name: KL127; name was augmented to make it unique | Organism (ID 17041,17042): Acinetobacter baumannii 34-1454, ST448 Full structure (ID 15987): CSDB ID(s): 8430 Molecule role: CPS | |
| Enzyme name: Gtr75K127 Enzyme GenBank ID: QBM04713.1 Gene name: gtr75 Gene cluster ID: MK399427.1 | Synthesized dimer: bDGlcp(1-6)bDGalpN Donor (ID 34839): ?DGlcp(1-P-P-5)xXnucU Acceptor (ID 36492): Ac(1-2)bDGalpN(1-6)aDGalp(1-6)bDGlcp(1-3)[Ac(1-2)]bDGalpN(1-P-P-1)Subst // Subst = undecaprenol Status: predicted in silico
Confirmation methods: Sequencing (gene, protein) ID: 3838 Notes: gene cluster name: KL127; name was augmented to make it unique | Organism (ID 17041,17042): Acinetobacter baumannii 34-1454, ST448 Full structure (ID 15987): CSDB ID(s): 8430 Molecule role: CPS | |
| Enzyme name: WzyK218 Enzyme GenBank ID: ULK74077.1 Gene name: wzyKL5 Gene cluster ID: OK493483.1. | Synthesized dimer: bDGalpN(1-3)aDGalp Donor (ID 36493): Ac(1-5)[Ac(1-7)]aXPsep(2-6)aDGalp(1-6)[Ac(1-2)]aDGlcpN(1-3)[Ac(1-2)]bDGalpN(1-P-P-1)Subst // Subst = undecaprenol Acceptor (ID 36494): -3)[Ac(1-5)[Ac(1-7)]aXPsep(2-6)]aDGalp(1-6)[Ac(1-2)]aDGlcpN(1-3)[Ac(1-2)]bDGalpN(1- Status: predicted in silico
Confirmation methods: Sequencing (gene, protein) ID: 3839 Notes: gene cluster name: KL218 | Organism (ID 17043): Acinetobacter baumannii 52-249 Full structure (ID 16148): CSDB ID(s): 8487 Molecule role: CPS | Kasimova et al. 2022a DOI: 10.1016/j.ijbiomac.2022.07.135 |
| Enzyme name: Gtr15K218 Enzyme GenBank ID: ULK74079.1 Gene name: gtr15 Gene cluster ID: OK493483.1. | Synthesized dimer: aDGlcpN(1-3)bDGalpN Donor (ID 35226): Ac(1-2)?DGlcpN(1-P-P-5)xXnucU Acceptor (ID 36235): Ac(1-2)bDGalpN(1-P-P-1)Subst // Subst = undecaprenol Status: predicted in silico
Confirmation methods: Sequencing (gene, protein) ID: 3840 Notes: gene cluster name: KL218; name was augmented to make it unique | Organism (ID 17043): Acinetobacter baumannii 52-249 Full structure (ID 16148): CSDB ID(s): 8487 Molecule role: CPS | |
| Enzyme name: Gtr14KL218 Enzyme GenBank ID: ULK74078.1 Gene name: gtr14 Gene cluster ID: OK493483.1. | Synthesized dimer: aDGalp(1-6)aDGlcpN Donor (ID 35273): ?DGalp(1-P-P-5)xXnucU Acceptor (ID 36422): Ac(1-2)aDGlcpN(1-3)[Ac(1-2)]bDGalpN(1-P-P-1)Subst // Subst = undecaprenol Status: predicted in silico
Confirmation methods: Sequencing (gene, protein) ID: 3841 Notes: gene cluster name: KL218; name was augmented to make it unique | Organism (ID 17043): Acinetobacter baumannii 52-249 Full structure (ID 16148): CSDB ID(s): 8487 Molecule role: CPS | |
| Enzyme name: KpsS3 Enzyme GenBank ID: ULK74076.1 Gene name: kpsS3 Gene cluster ID: OK493483.1. | Synthesized dimer: aPsep(2-6)aDGalp Donor (ID 36237): Ac(1-5)[Ac(1-7)]?XPsep(2-P-5)xXnucC Acceptor (ID 36423): aDGalp(1-6)[Ac(1-2)]aDGlcpN(1-3)[Ac(1-2)]bDGalpN(1-P-P-1)Subst // Subst = undecaprenol Status: predicted in silico
Confirmation methods: Sequencing (gene, protein) ID: 3842 Notes: retaining GT, gene cluster name: KL218 | Organism (ID 17043): Acinetobacter baumannii 52-249 Full structure (ID 16148): CSDB ID(s): 8487 Molecule role: CPS | |
| Enzyme name: ItrB1 Enzyme GenBank ID: ULK74050.1 Gene name: itrB1 Gene cluster ID: OK493482.1 | Synthesized dimer: P(?-?)P Donor (ID 36495): Ac(1-2)?DQuipN(1-P-P-5)xXnucU Acceptor (ID 35735): P-1)Subst // Subst = undecaprenol Status: predicted in silico
Confirmation methods: Sequencing (gene, protein) ID: 3843 Notes: gene cluster name: KL98, phosphoglycosyltransferase | Organism (ID 17044): Acinetobacter baumannii REV-1184 Full structure (ID 36496): Molecule role: CPS | Kasimova et al. 2022b DOI: 10.1016/j.ijbiomac.2022.07.136 |
| Enzyme name: WzyK98 Enzyme GenBank ID: ULK74046.1 Gene name: wzy Gene cluster ID: OK493482.1 | Synthesized dimer: bDQuipN(1-3)aDGalpN Donor (ID 36497): xRPyr(2-4:2-6)[Ac(1-2)]aDGalpN(1-6)[Ac(1-2)]aDGlcpN(1-4)[Ac(1-2)]aDGalpNA(1-3)[Ac(1-2)]bDQuipN(1-P-P-1)Subst // Subst = undecaprenol Acceptor (ID 36498): -3)[xRPyr(2-4:2-6),Ac(1-2)]aDGalpN(1-6)[Ac(1-2)]aDGlcpN(1-4)[Ac(1-2)]aDGalpNA(1-3)[Ac(1-2)]bDQuipN(1- Status: predicted in silico
Confirmation methods: Sequencing (gene, protein) ID: 3844 Notes: gene cluster name: KL98 | Organism (ID 17044): Acinetobacter baumannii REV-1184 Exact full structure is unknown Molecule role: CPS | |
| Enzyme name: Gtr12KL98 Enzyme GenBank ID: ULK74048.1 Gene name: gtr12 Gene cluster ID: OK493482.1 | Synthesized dimer: aDGalpNA(1-3)bDQuipN Donor (ID 36216): Ac(1-2)?DGalpNA(1-P-P-5)xXnucU Acceptor (ID 36499): Ac(1-2)bDQuipN(1-P-P-1)Subst // Subst = undecaprenol Status: predicted in silico
Confirmation methods: Sequencing (gene, protein) ID: 3845 Notes: gene cluster name: KL98; name was augmented to make it unique | Organism (ID 17044): Acinetobacter baumannii REV-1184 Exact full structure is unknown Molecule role: CPS | |
| Enzyme name: Gtr172 Enzyme GenBank ID: ULK74047.1 Gene name: gtr172 Gene cluster ID: OK493482.1 | Synthesized dimer: aDGlcpN(1-4)aDGalpNA Donor (ID 35669): Ac(1-2)?DGalpN(1-P-P-5)xXnucU Acceptor (ID 36500): Ac(1-2)aDGalpNA(1-3)[Ac(1-2)]bDQuipN(1-P-P-1)Subst // Subst = undecaprenol Status: predicted in silico
Confirmation methods: Sequencing (gene, protein) ID: 3846 Notes: gene cluster name: KL98 | Organism (ID 17044): Acinetobacter baumannii REV-1184 Exact full structure is unknown Molecule role: CPS | |
| Enzyme name: Gtr171 Enzyme GenBank ID: ULK74045.1 Gene name: gtr171 Gene cluster ID: OK493482.1 | Synthesized dimer: aDGalpN(1-6)aDGlcpN Donor (ID 35669): Ac(1-2)?DGalpN(1-P-P-5)xXnucU Acceptor (ID 36501): Ac(1-2)aDGlcpN(1-4)[Ac(1-2)]aDGalpNA(1-3)[Ac(1-2)]bDQuipN(1-P-P-1)Subst // Subst = undecaprenol Status: predicted in silico
Confirmation methods: Sequencing (gene, protein) ID: 3847 Notes: gene cluster name: KL98 | Organism (ID 17044): Acinetobacter baumannii REV-1184 Exact full structure is unknown Molecule role: CPS | |
| Enzyme name: Ptr1K98 Enzyme GenBank ID: ULK74044.1 Gene name: ptr1 Gene cluster ID: OK493482.1 | Synthesized dimer: RPyr(2-4)aDGalpN Acceptor (ID 36502): Ac(1-2)aDGalpN(1-6)[Ac(1-2)]aDGlcpN(1-4)[Ac(1-2)]aDGalpNA(1-3)[Ac(1-2)]bDQuipN(1-P-P-1)Subst // Subst = undecaprenol Status: predicted in silico
Confirmation methods: Sequencing (gene, protein) ID: 3848 Notes: gene cluster name: KL98, pyranyltransferase; name was augmented to make it unique | Organism (ID 17044): Acinetobacter baumannii REV-1184 Exact full structure is unknown Molecule role: CPS | |
| Enzyme name: QhbA (WeeI) Enzyme GenBank ID: DAA64737.1* | Synthesized dimer: S3HOBut(1-4)aDQuipN4N Acceptor (ID 36503): Ac(1-2)aDQuipN4N(1-P-P-5)xXnucU Status: evidence in vitro
Confirmation methods: Crictallographic analysis ID: 3849 Notes: gene cluster name: KL39 | Organism (ID 6514): Acinetobacter baumannii AYE Full structure (ID 36504): Molecule role: activated monosaccharide | Kenyon et al. 2016b DOI: 10.1099/mic.0.000313 Morrison et al. 2013 DOI: 10.1016/j.abb.2013.05.011 |
| Enzyme name: WeeH Enzyme GenBank ID: DAA64736.1 | Synthesized dimer: P(?-?)P Donor (ID 36505): Ac(1-2)[<<50%lS3HOBut(1-4)|50%Ac(1-4)>>]aDQuipN4N(1-P-P-5)xXnucU Acceptor (ID 35735): P-1)Subst // Subst = undecaprenol Status: evidence in vitro
Confirmation methods: Sequencing (gene, protein) ID: 3850 Notes: phosphoglycosyltransferase | Organism (ID 6514): Acinetobacter baumannii AYE Full structure (ID 36506): Molecule role: membrane glycolipid | Morrison et al. 2013 DOI: 10.1016/j.abb.2013.05.011 |
| Enzyme name: VioB Enzyme GenBank ID: H6W49_ RS17300 | Synthesized dimer: Ac(1-2)DQuip4N Donor (ID 35536): Ac(1-?)Subst // Subst = CoA (substituted at S) Acceptor (ID 36507): ?DQuip4N(1-P-P-5)xXnucdT Status: evidence in vitro
Confirmation methods: Cristallization ID: 3851 Notes: gene cluster name: KL57, acetyltransferase | Organism (ID 7730): Acinetobacter baumannii BAL_212 Organ/tissue: Escherichia coli BL21 (DE3) Full structure (ID 36508): Molecule role: activated monosaccharide | Herkert et al. 2022 DOI: 10.1002/prot.26334 |
| Enzyme name: UGT71E1 Enzyme GenBank ID: AAR06914.1 UniProt ID: Q6VAB2 CAZy family: GT1 Gene name: UGT71E1 Gene GenBank ID: AY345976.1 | Synthesized dimer: bDGlcp(1-8')Subst // Subst = curcumin = SMILES COC1=CC(/C=C/C(CC(/C=C/C2=CC={8}C(C(OC)=C2)O)=O)=O)=CC={58}C1O Donor (ID 34839): ?DGlcp(1-P-P-5)xXnucU Acceptor (ID 34872): Subst // Subst = curcumin = SMILES COC1=CC(/C=C/C(CC(/C=C/C2=CC={8}C(C(OC)=C2)O)=O)=O)=CC={58}C1O Status: evidence in vitro
Confirmation methods: in vitro (purified protein) ID: 4000 | Organism (ID 14634): Stevia rebaudiana Full structure (ID 34873): | Hansen et al. 2009 DOI: 10.1016/j.phytochem.2009.01.013 |
| Synthesized dimer: bDGlcp(1-4)Subst // Subst = vanilin Donor (ID 34839): ?DGlcp(1-P-P-5)xXnucU Acceptor (ID 34874): Subst // Subst = vanilin Status: evidence in vitro
Confirmation methods: in vitro (purified protein) ID: 4001 | Organism (ID 14634): Stevia rebaudiana Full structure (ID 34875): | ||
| Synthesized dimer: bDGlcp(1-3)Subst // Subst = trans-resveratrol Donor (ID 34839): ?DGlcp(1-P-P-5)xXnucU Acceptor (ID 34876): Subst // Subst = trans-resveratrol Status: evidence in vitro
Confirmation methods: in vitro (purified protein) ID: 4002 | Organism (ID 14634): Stevia rebaudiana Full structure (ID 34877): | ||
| Synthesized dimer: bDGlcp(1-4')Subst // Subst = trans-resveratrol Donor (ID 34839): ?DGlcp(1-P-P-5)xXnucU Acceptor (ID 34876): Subst // Subst = trans-resveratrol Status: evidence in vitro
Confirmation methods: in vitro (purified protein) ID: 4003 | Organism (ID 14634): Stevia rebaudiana Full structure (ID 34878): | ||
| Synthesized dimer: bDGlcp(1-4')Subst // Subst = etoposide Donor (ID 34839): ?DGlcp(1-P-P-5)xXnucU Acceptor (ID 34879): Subst // Subst = etoposide Status: evidence in vitro
Confirmation methods: in vitro (purified protein) ID: 4004 | Organism (ID 14634): Stevia rebaudiana Full structure (ID 34880): | ||
| Synthesized dimer: DGlcp(1-1)Subst // Subst = eugenol = SMILES COC1=CC(CC=C)=CC={1}C1O Donor (ID 34839): ?DGlcp(1-P-P-5)xXnucU Acceptor (ID 34881): Subst // Subst = eugenol = SMILES COC1=CC(CC=C)=CC={1}C1O Status: evidence in vitro
Confirmation methods: in vitro (purified protein) ID: 4005 | Organism (ID 14634): Stevia rebaudiana Full structure (ID 36546): | ||
| Synthesized dimer: DGlcp(1-1)Subst // Subst = 2,4,5-trichlorophenol Donor (ID 34839): ?DGlcp(1-P-P-5)xXnucU Acceptor (ID 34851): Subst // Subst = 2,4,5-trichlorophenol Status: evidence in vitro
Confirmation methods: in vitro (purified protein) ID: 4006 | Organism (ID 14634): Stevia rebaudiana Full structure (ID 34852): | ||
| Enzyme name: SGT Enzyme GenBank ID: CAB06081.1 UniProt ID: O22678 CAZy family: GT1 Gene name: Z83832 Gene GenBank ID: Z83832.1 | Synthesized dimer: DGlcp(1-3)Subst // Subst = beta-sitosterol Donor (ID 34839): ?DGlcp(1-P-P-5)xXnucU Acceptor (ID 35251): Subst // Subst = beta-sitosterol Status: evidence in vitro
Confirmation methods: in vitro (crude extract) ID: 4007 | Organism (ID 17065): Avena sativa cv. Alfred Full structure (ID 35252): | Warnecke et al. 1997 DOI: 10.1023/A:1005806119807 |
| Synthesized dimer: DGlcp(1-3)Subst // Subst = stigmasterol = SMILES CC[C@H](/C=C/[C@@H](C)[C@H]1CC[C@@H]2[C@@]1(CC[C@H]3[C@H]2CC=C4[C@@]3(CC{3}[C@@H](C4)O)C)C)C(C)C Donor (ID 34839): ?DGlcp(1-P-P-5)xXnucU Acceptor (ID 35253): Subst // Subst = stigmasterol = SMILES CC[C@H](/C=C/[C@@H](C)[C@H]1CC[C@@H]2[C@@]1(CC[C@H]3[C@H]2CC=C4[C@@]3(CC{3}[C@@H](C4)O)C)C)C(C)C Status: evidence in vitro
Confirmation methods: in vitro (crude extract) ID: 4008 | Organism (ID 17065): Avena sativa cv. Alfred Full structure (ID 27654): CSDB ID(s): 60933 | ||
| Synthesized dimer: DGlcp(1-3)Subst // Subst = cholesterol = SMILES C[C@H](CCCC(C)C)[C@H]1CC[C@@H]2[C@@]1(CC[C@H]3[C@H]2CC=C4[C@@]3(CC{3}[C@@H](C4)O)C)C Donor (ID 34839): ?DGlcp(1-P-P-5)xXnucU Acceptor (ID 35268): Subst // Subst = cholesterol = SMILES C[C@H](CCCC(C)C)[C@H]1CC[C@@H]2[C@@]1(CC[C@H]3[C@H]2CC=C4[C@@]3(CC{3}[C@@H](C4)O)C)C Status: evidence in vitro
Confirmation methods: in vitro (crude extract) ID: 4009 | Organism (ID 17065): Avena sativa cv. Alfred Full structure (ID 27657): CSDB ID(s): 60936 | ||
| Enzyme name: FG2 UniProt ID: I1LCI8 Gene name: FG2 Gene GenBank ID: 100819964 | Synthesized dimer: aLRhap(1-6)bDGlcp Donor (ID 35148): ?LRhap(1-P-P-5)xXnucU Acceptor (ID 35299): bDGlcp(1-3)xXQuercetin Status: evidence in vitro
Confirmation methods: expression in E.coli (as whole-cell biocatalyst) ID: 4010 | Organism (ID 13572): Glycine max Expressed in: E. coli Full structure (ID 20387): CSDB ID(s): 47960, 49043, 49621, 49695, 50449, 51135, 60082, 60204, 60258, 60341, 60396, 61822, 61849, 62035, 62233, 62471, 62556, 63010, 63270, 63523, 64122, 64606, 64697, 64753, 64776, 64785, 64844, 64952, 64965, 65007, 65011, 65052, 65053, 65102, 65184, 65208, 65270, 65353, 65374, 65395, 65409, 65420, 65500, 65513, 65831, 65943, 65985, 66074, 66092, 66234, 66337, 66364, 66416, 66570, 66577, 66655, 66689, 66719, 66796, 66946, 66948, 67015, 67058, 67116, 67188, 67290, 67435, 67511, 67526, 67548, 67569, 67590, 67618, 67755, 67863, 67946, 67993, 68018, 68028, 68165, 68848, 68992, 120171, 146364, 146678, 146810, 149316, 246660, 270705, 290867 | An et al. 2016 DOI: 10.1007/s10295-016-1750-x |
| Enzyme name: UGT72AD1 Gene GenBank ID: AP009657 | Synthesized dimer: DGlcp(1-3)Kaempferol Donor (ID 34839): ?DGlcp(1-P-P-5)xXnucU Acceptor (ID 34951): xXKaempferol Status: evidence in vitro
Confirmation methods: in vitro (purified protein) ID: 4011 | Organism (ID 17071): Lotus japonicus Organ/tissue: root, leaf, seed, stem, flower Full structure (ID 34961): | Yin et al. 2017 DOI: 10.1093/jxb/erw420 |
| Synthesized dimer: DGlcp(1-7)Kaempferol Donor (ID 34839): ?DGlcp(1-P-P-5)xXnucU Acceptor (ID 34951): xXKaempferol Status: evidence in vitro
Confirmation methods: in vitro (purified protein) ID: 4012 | Organism (ID 17071): Lotus japonicus Organ/tissue: root, leaf, seed, stem, flower Full structure (ID 34952): | ||
| Synthesized dimer: DGlcp(1-3)Quercetin Donor (ID 34839): ?DGlcp(1-P-P-5)xXnucU Acceptor (ID 34846): xXQuercetin Status: evidence in vitro
Confirmation methods: in vitro (purified protein) ID: 4013 | Organism (ID 17071): Lotus japonicus Organ/tissue: root, leaf, seed, stem, flower Full structure (ID 34960): | ||
| Synthesized dimer: DGlcp(1-3)Myricetin Donor (ID 34839): ?DGlcp(1-P-P-5)xXnucU Acceptor (ID 35165): xXMyricetin Status: evidence in vitro
Confirmation methods: in vitro (purified protein) ID: 4014 | Organism (ID 17071): Lotus japonicus Organ/tissue: root, leaf, seed, stem, flower Full structure (ID 35225): | ||
| Enzyme name: UGT72Z2 Gene GenBank ID: KP410264 | Synthesized dimer: DGlcp(1-3)Kaempferol Donor (ID 34839): ?DGlcp(1-P-P-5)xXnucU Acceptor (ID 34951): xXKaempferol Status: evidence in vitro
Confirmation methods: in vitro (purified protein) ID: 4015 | Organism (ID 17071): Lotus japonicus Organ/tissue: root, leaf, seed, stem, flower Full structure (ID 34961): | |
| Synthesized dimer: DGlcp(1-3)Quercetin Donor (ID 34839): ?DGlcp(1-P-P-5)xXnucU Acceptor (ID 34846): xXQuercetin Status: evidence in vitro
Confirmation methods: in vitro (purified protein) ID: 4016 | Organism (ID 17071): Lotus japonicus Organ/tissue: root, leaf, seed, stem, flower Full structure (ID 34960): | ||
| Synthesized dimer: DGlcp(1-3)Myricetin Donor (ID 34839): ?DGlcp(1-P-P-5)xXnucU Acceptor (ID 35165): xXMyricetin Status: evidence in vitro
Confirmation methods: in vitro (purified protein) ID: 4017 | Organism (ID 17071): Lotus japonicus Organ/tissue: root, leaf, seed, stem, flower Full structure (ID 35225): | ||
| Enzyme name: UGT72AH1 Gene GenBank ID: KT895085 | Synthesized dimer: DGlcp(1-3)Kaempferol Donor (ID 34839): ?DGlcp(1-P-P-5)xXnucU Acceptor (ID 34951): xXKaempferol Status: evidence in vitro
Confirmation methods: in vitro (purified protein) ID: 4018 | Organism (ID 17071): Lotus japonicus Organ/tissue: root, leaf, seed, stem, flower Full structure (ID 34961): | |
| Synthesized dimer: DGlcp(1-3)Quercetin Donor (ID 34839): ?DGlcp(1-P-P-5)xXnucU Acceptor (ID 34846): xXQuercetin Status: evidence in vitro
Confirmation methods: in vitro (purified protein) ID: 4019 | Organism (ID 17071): Lotus japonicus Organ/tissue: root, leaf, seed, stem, flower Full structure (ID 34960): | ||
| Synthesized dimer: DGlcp(1-3)Myricetin Donor (ID 34839): ?DGlcp(1-P-P-5)xXnucU Acceptor (ID 35165): xXMyricetin Status: evidence in vitro
Confirmation methods: in vitro (purified protein) ID: 4020 | Organism (ID 17071): Lotus japonicus Organ/tissue: root, leaf, seed, stem, flower Full structure (ID 35225): | ||
| Enzyme name: UGT72AF1 Gene GenBank ID: KT895083 | Synthesized dimer: DGlcp(1-?)Apigenin Donor (ID 34839): ?DGlcp(1-P-P-5)xXnucU Acceptor (ID 34958): xXApigenin Status: evidence in vitro
Confirmation methods: in vitro (purified protein) ID: 4021 | Organism (ID 17071): Lotus japonicus Organ/tissue: root, leaf, seed, stem, flower Full structure (ID 35018): | |
| Synthesized dimer: DGlcp(1-?)Subst // Subst = daidzein = SMILES O=C1C(C2=CC={54}C(O)C=C2)=COC3=C1C=C{7}C(O)={8}C3 Donor (ID 34839): ?DGlcp(1-P-P-5)xXnucU Acceptor (ID 34979): Subst // Subst = daidzein = SMILES O=C1C(C2=CC={54}C(O)C=C2)=COC3=C1C=C{7}C(O)={8}C3 Status: evidence in vitro
Confirmation methods: in vitro (purified protein) ID: 4022 | Organism (ID 17071): Lotus japonicus Organ/tissue: root, leaf, seed, stem, flower Full structure (ID 36563): | ||
| Synthesized dimer: DGlcp(1-?)Subst // Subst = genistein = SMILES O=C1C(C2=CC={54}C(O)C=C2)=COC3=C1{5}C(O)={6}C{7}C(O)={8}C3 Donor (ID 34839): ?DGlcp(1-P-P-5)xXnucU Acceptor (ID 34978): Subst // Subst = genistein = SMILES O=C1C(C2=CC={54}C(O)C=C2)=COC3=C1{5}C(O)={6}C{7}C(O)={8}C3 Status: evidence in vitro
Confirmation methods: in vitro (purified protein) ID: 4023 | Organism (ID 17071): Lotus japonicus Organ/tissue: root, leaf, seed, stem, flower Full structure (ID 35023): | ||
| Enzyme name: UGT72V3 Gene GenBank ID: KT895088 | Synthesized dimer: DGlcp(1-?)Subst // Subst = daidzein = SMILES O=C1C(C2=CC={54}C(O)C=C2)=COC3=C1C=C{7}C(O)={8}C3 Donor (ID 34839): ?DGlcp(1-P-P-5)xXnucU Acceptor (ID 34979): Subst // Subst = daidzein = SMILES O=C1C(C2=CC={54}C(O)C=C2)=COC3=C1C=C{7}C(O)={8}C3 Status: evidence in vitro
Confirmation methods: in vitro (purified protein) ID: 4024 | Organism (ID 17071): Lotus japonicus Organ/tissue: root, leaf, seed, stem, flower Full structure (ID 36563): | |
| Synthesized dimer: DGlcp(1-?)Subst // Subst = genistein = SMILES O=C1C(C2=CC={54}C(O)C=C2)=COC3=C1{5}C(O)={6}C{7}C(O)={8}C3 Donor (ID 34839): ?DGlcp(1-P-P-5)xXnucU Acceptor (ID 34978): Subst // Subst = genistein = SMILES O=C1C(C2=CC={54}C(O)C=C2)=COC3=C1{5}C(O)={6}C{7}C(O)={8}C3 Status: evidence in vitro
Confirmation methods: in vitro (purified protein) ID: 4025 | Organism (ID 17071): Lotus japonicus Organ/tissue: root, leaf, seed, stem, flower Full structure (ID 35023): | ||
| Synthesized dimer: DGlcp(1-?)Luteolin Donor (ID 34839): ?DGlcp(1-P-P-5)xXnucU Acceptor (ID 34871): xXLuteolin Status: evidence in vitro
Confirmation methods: in vitro (purified protein) ID: 4026 | Organism (ID 17071): Lotus japonicus Organ/tissue: root, leaf, seed, stem, flower Full structure (ID 26495): CSDB ID(s): 145285 | ||
| Synthesized dimer: DGlcp(1-?)Kaempferol Donor (ID 34839): ?DGlcp(1-P-P-5)xXnucU Acceptor (ID 34951): xXKaempferol Status: evidence in vitro
Confirmation methods: in vitro (purified protein) ID: 4027 | Organism (ID 17071): Lotus japonicus Organ/tissue: root, leaf, seed, stem, flower Full structure (ID 35013): | ||
| Synthesized dimer: DGlcp(1-?)Quercetin Donor (ID 34839): ?DGlcp(1-P-P-5)xXnucU Acceptor (ID 34846): xXQuercetin Status: evidence in vitro
Confirmation methods: in vitro (purified protein) ID: 4028 | Organism (ID 17071): Lotus japonicus Organ/tissue: root, leaf, seed, stem, flower Full structure (ID 26494): CSDB ID(s): 145291 | ||
| Synthesized dimer: DGlcp(1-?)Myricetin Donor (ID 34839): ?DGlcp(1-P-P-5)xXnucU Acceptor (ID 35165): xXMyricetin Status: evidence in vitro
Confirmation methods: in vitro (purified protein) ID: 4029 | Organism (ID 17071): Lotus japonicus Organ/tissue: root, leaf, seed, stem, flower Full structure (ID 36564): | ||
| Enzyme name: UGT73B6 UniProt ID: Q6QDB6 CAZy family: GT1 Gene name: UGT73B6 Gene GenBank ID: AY547304 | Synthesized dimer: DGlcp(1-1)Subst // Subst = cinnamyl alcohol Donor (ID 34839): ?DGlcp(1-P-P-5)xXnucU Acceptor (ID 36547): Subst // Subst = cinnamyl alcohol Status: evidence in vitro
Confirmation methods: expression in E.coli (as whole-cell biocatalyst) ID: 4030 Notes: Product common name: rosin | Organism (ID 13210): Rhodiola sachalinensis Expressed in: E. coli Full structure (ID 36548): | Zhou et al. 2017 DOI: 10.1021/acs.jafc.7b00076 |
| Enzyme name: CaUGT3 UniProt ID: C5NN14 CAZy family: GT1 Gene name: CaUGT3 Gene GenBank ID: AB443870.1 | Synthesized dimer: bDGlcp(1-6)bDGlcp Donor (ID 34839): ?DGlcp(1-P-P-5)xXnucU Acceptor (ID 36549): bDGlcp(1-9)Subst // Subst = cinnamic alcohol Status: evidence in vitro
Confirmation methods: expression in E.coli (as whole-cell biocatalyst) ID: 4031 Notes: Product common name: rosavin B. | Organism (ID 14552): Catharanthus roseus Expressed in: E. coli Full structure (ID 36550): | Bi et al. 2019 DOI: 10.1021/acssynbio.9b00219 |
| Synthesized dimer: bDGlcp(1-6)bDGlcp Donor (ID 34839): ?DGlcp(1-P-P-5)xXnucU Acceptor (ID 36551): bDGlcp(1-6)bDGlcp(1-9)Subst // Subst = cinnamic alcohol Status: evidence in vitro
Confirmation methods: expression in E.coli (as whole-cell biocatalyst) ID: 4032 Notes: Product common name: rosavin C. | Organism (ID 14552): Catharanthus roseus Expressed in: E. coli Full structure (ID 36552): | ||
| Synthesized dimer: bDGlcp(1-6)bDGlcp Donor (ID 34839): ?DGlcp(1-P-P-5)xXnucU Acceptor (ID 36553): bDGlcp(1-6)bDGlcp(1-6)bDGlcp(1-9)Subst // Subst = cinnamic alcohol Status: evidence in vitro
Confirmation methods: expression in E.coli (as whole-cell biocatalyst) ID: 4033 Notes: Product common name: rosavin D. | Organism (ID 14552): Catharanthus roseus Expressed in: E. coli Full structure (ID 36554): | ||
| Synthesized dimer: bDGlcp(1-6)bDGlcp Donor (ID 34839): ?DGlcp(1-P-P-5)xXnucU Acceptor (ID 36555): bDGlcp(1-9)Subst // Subst = p-coumaric alcohol Status: evidence in vitro
Confirmation methods: expression in E.coli (as whole-cell biocatalyst) ID: 4034 Notes: Product common name: triandrin C. | Organism (ID 14552): Catharanthus roseus Expressed in: E. coli Full structure (ID 36556): | ||
| Synthesized dimer: bDGlcp(1-6)bDGlcp Donor (ID 34839): ?DGlcp(1-P-P-5)xXnucU Acceptor (ID 36557): bDGlcp(1-4)Subst // Subst = p-coumaric alcohol Status: evidence in vitro
Confirmation methods: expression in E.coli (as whole-cell biocatalyst) ID: 4035 Notes: Product common name: triandrin D. | Organism (ID 14552): Catharanthus roseus Expressed in: E. coli Full structure (ID 36558): |
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